INFERNAL1/a [1.1.5 | Sep 2023] NAME sX9 ACC RF02228 DESC Xanthomonas sRNA sX9 STATES 242 NODES 69 CLEN 76 W 92 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 01:46:33 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02228/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 3.558594 CKSUM 4084076024 NULL 0.000 0.000 0.000 0.000 GA 44.00 TC 44.00 NC 43.90 EFP7GF -9.8152 0.71886 ECMLC 0.63067 -9.20386 0.34714 1600000 495662 0.002421 ECMGC 0.39421 -16.75645 -4.72126 1600000 45973 0.008701 ECMLI 0.51624 -9.74125 1.55877 1600000 409852 0.002928 ECMGI 0.42793 -12.21923 -1.22746 1600000 44142 0.009062 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 92 112 -7.497 -7.704 -0.036 -6.118 IL 1 1 2 1 4 7 34 96 116 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 7 34 95 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 6 33 92 112 -8.842 -0.013 -7.159 1.870 -3.406 -2.941 -3.054 D 4 2 3 5 3 4 31 91 111 -5.620 -0.734 -1.403 IL 5 5 3 5 3 6 33 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 77 - C - - MR 6 5 3 8 3 5 32 91 111 -8.842 -0.013 -7.159 -1.305 1.595 -2.675 -1.263 D 7 5 3 8 3 4 30 90 110 -6.390 -1.568 -0.620 IR 8 8 3 8 3 6 32 92 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 76 - C - - MR 9 8 3 11 2 4 31 90 110 -8.957 -0.003 -2.983 1.839 -3.790 -2.167 D 10 8 3 11 2 3 30 89 109 -4.432 -0.068 IR 11 11 3 11 2 5 31 91 111 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 4 ] - - - - - - B 12 11 3 133 13 3 30 89 109 [ BEGR 35 ] - - - - - - S 13 12 1 14 3 0 3 54 73 -8.480 -0.014 -7.134 IL 14 14 2 14 3 1 2 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - u - - - ML 15 14 2 17 3 1 4 54 73 -8.480 -0.014 -7.134 -0.631 -0.687 -0.332 0.955 D 16 14 2 17 3 0 0 52 72 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 2 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - C - - - ML 18 17 3 20 3 1 3 53 72 -8.480 -0.014 -7.134 -1.705 1.560 -1.683 -1.206 D 19 17 3 20 3 0 0 51 71 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - C - - - ML 21 20 3 23 3 1 3 51 71 -8.480 -0.014 -7.134 -1.407 1.619 -2.739 -1.318 D 22 20 3 23 3 0 0 50 70 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - G - - - ML 24 23 3 26 3 1 3 50 70 -8.480 -0.014 -7.134 0.329 -2.065 1.106 -1.506 D 25 23 3 26 3 0 0 49 69 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - c - - - ML 27 26 3 29 3 1 2 49 69 -8.480 -0.014 -7.134 -0.880 0.961 -1.165 0.089 D 28 26 3 29 3 0 0 48 68 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - a - - - ML 30 29 3 32 3 1 1 48 67 -8.480 -0.285 -2.501 0.612 -0.712 0.002 -0.218 D 31 29 3 32 3 0 0 47 67 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - C - - - ML 33 32 3 35 3 1 1 47 66 -8.212 -0.017 -6.866 -1.374 1.473 -1.681 -0.928 D 34 32 3 35 3 0 0 46 65 -7.871 -0.345 -2.262 IL 35 35 3 35 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - C - - - ML 36 35 3 38 3 1 1 46 65 -8.480 -0.014 -7.134 -1.121 1.548 -2.556 -1.165 D 37 35 3 38 3 0 0 45 64 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - C - - - ML 39 38 3 41 3 1 1 45 64 -8.480 -0.014 -7.134 -1.956 1.573 -2.830 -0.675 D 40 38 3 41 3 0 0 44 63 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - A - - - ML 42 41 3 44 3 1 1 44 63 -8.480 -0.014 -7.134 1.209 -0.958 -0.630 -0.922 D 43 41 3 44 3 0 0 43 62 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - c - - - ML 45 44 3 47 5 1 1 43 62 -7.553 -0.028 -7.368 -7.580 -8.472 -0.797 0.795 0.072 -0.648 D 46 44 3 47 5 0 0 42 61 -4.959 -0.803 -4.221 -2.596 -2.508 IL 47 47 3 47 5 1 1 43 62 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 48 75 C G - - MP 48 47 3 52 6 2 2 42 61 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -3.351 -3.436 -3.376 0.022 0.325 -4.066 3.033 -0.403 -3.403 0.090 -3.869 -1.681 0.923 -3.589 -0.446 -2.397 ML 49 47 3 52 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 49 74 u a - - MP 54 53 6 58 6 2 2 40 59 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -3.550 -3.601 -3.551 -0.041 -0.576 -4.228 1.491 -3.378 -3.565 0.062 -4.024 -1.758 2.930 -3.770 0.839 -2.517 ML 55 53 6 58 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 38 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 50 73 g c - - MP 60 59 6 64 6 2 2 38 57 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -3.353 -2.029 -3.693 0.830 -4.227 -3.989 0.044 -3.808 -3.297 2.375 -0.334 2.365 -0.293 -3.661 -1.840 -2.493 ML 61 59 6 64 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 36 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 51 72 A U - - MP 66 65 6 70 6 2 2 36 55 -9.342 -9.281 -0.044 -5.523 -8.338 -8.733 -0.275 -3.029 -3.785 3.400 -4.191 -5.074 -0.295 -3.961 -3.756 0.657 -4.324 -0.656 -0.551 -4.240 -2.059 -2.759 ML 67 65 6 70 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 52 71 C G - - MP 72 71 6 76 6 2 2 34 53 -9.316 -9.255 -0.018 -8.032 -8.311 -8.706 -3.652 -3.677 -3.644 -0.156 -2.832 -4.296 3.240 -3.483 -3.667 -0.025 -0.576 -1.843 0.775 -3.869 0.244 -2.632 ML 73 71 6 76 6 1 1 33 52 -6.608 -6.954 -0.904 -1.363 -6.804 -4.333 0.008 0.361 -0.687 0.123 MR 74 71 6 76 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 33 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 53 70 g u - - MP 78 77 6 82 6 2 2 32 51 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -3.399 -2.137 -3.787 1.736 -4.278 -4.330 -0.113 -0.376 -3.294 0.946 -3.611 2.837 -0.451 -3.982 -1.979 -2.526 ML 79 77 6 82 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 54 69 a u - - MP 84 83 6 88 4 2 2 30 49 -7.497 -7.704 -0.036 -6.118 -1.735 -1.768 -1.054 1.476 -1.954 -2.733 1.259 -2.279 -0.958 1.244 -0.975 1.002 1.121 -2.060 -0.179 -1.181 ML 85 83 6 88 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 30 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 29 49 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - C - - - ML 90 89 6 92 3 1 1 27 46 -8.480 -0.068 -4.535 -2.023 1.601 -2.894 -0.770 D 91 89 6 92 3 0 0 27 46 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - U - - - ML 93 92 3 95 3 1 1 26 45 -8.427 -0.015 -7.081 -0.918 -0.286 -1.383 1.181 D 94 92 3 95 3 0 0 25 44 -6.736 -0.908 -1.128 IL 95 95 3 95 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 96 95 3 98 3 1 1 25 44 -8.480 -0.014 -7.134 -2.621 -3.972 1.878 -3.346 D 97 95 3 98 3 0 0 24 43 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - C - - - ML 99 98 3 101 3 1 1 24 43 -8.480 -0.014 -7.134 -1.042 1.182 -0.947 -0.459 D 100 98 3 101 3 0 0 23 42 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - U - - - ML 102 101 3 104 3 1 1 23 42 -8.480 -0.014 -7.134 -2.467 -2.300 -3.236 1.811 D 103 101 3 104 3 0 0 22 41 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - C - - - ML 105 104 3 107 3 1 1 22 41 -8.480 -0.014 -7.134 -2.983 1.839 -3.790 -2.167 D 106 104 3 107 3 0 0 21 40 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - G - - - ML 108 107 3 110 3 1 1 21 39 -8.480 -0.014 -7.134 -2.621 -3.972 1.878 -3.346 D 109 107 3 110 3 0 0 20 39 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - C - - - ML 111 110 3 113 3 1 1 20 38 -8.480 -0.014 -7.134 -1.956 1.573 -2.830 -0.675 D 112 110 3 113 3 0 0 19 38 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - U - - - ML 114 113 3 116 3 1 1 18 37 -8.480 -0.014 -7.134 -1.312 -1.473 -1.382 1.513 D 115 113 3 116 3 0 0 18 37 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - A - - - ML 117 116 3 119 3 1 1 17 36 -8.480 -0.014 -7.134 1.223 -0.768 -0.885 -0.896 D 118 116 3 119 3 0 0 17 35 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - C - - - ML 120 119 3 122 3 1 1 16 34 -8.480 -0.014 -7.134 -1.310 1.085 -2.179 0.327 D 121 119 3 122 3 0 0 16 34 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - G - - - ML 123 122 3 125 3 1 1 14 33 -8.480 -0.014 -7.134 -0.351 -2.424 1.463 -1.877 D 124 122 3 125 3 0 0 15 33 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - U - - - ML 126 125 3 128 3 1 1 13 31 -8.480 -0.014 -7.134 -1.628 -0.892 -2.379 1.558 D 127 125 3 128 3 0 0 13 32 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - U - - - ML 129 128 3 131 2 1 1 1 1 * 0.000 -0.429 -1.113 -0.485 1.057 D 130 128 3 131 2 0 0 0 0 * 0.000 IL 131 131 3 131 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 132 131 3 -1 0 0 0 0 0 [ BEGL 5 ] - - - - - - S 133 12 1 134 1 0 4 49 68 0.000 [ BIF 6 ] - - - - - - B 134 133 1 135 182 0 4 49 68 [ BEGL 7 ] - - - - - - S 135 134 1 136 4 0 0 28 47 -0.036 -7.136 -6.544 -7.184 [ MATP 8 ] 2 16 U A - - MP 136 135 1 140 6 2 2 28 47 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -4.200 -4.163 -4.218 -0.649 -3.509 -4.938 0.668 -4.097 -1.167 -0.535 -4.697 -2.249 3.519 -4.445 -1.260 -3.091 ML 137 135 1 140 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 138 135 1 140 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 139 135 1 140 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 140 140 5 140 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 141 141 6 141 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 3 15 G C - - MP 142 141 6 146 6 2 2 26 45 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -5.734 -3.581 -6.002 -0.501 -6.606 -5.061 -1.725 -6.262 -4.917 3.807 -5.196 -1.335 -2.090 -5.100 -3.829 -4.865 ML 143 141 6 146 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 144 141 6 146 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 145 141 6 146 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 146 146 5 146 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 147 147 6 147 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 4 14 u a - - MP 148 147 6 152 6 2 2 24 43 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -3.127 -3.140 -3.199 0.387 0.192 -3.966 1.620 -3.139 -3.208 1.040 -3.714 -1.277 2.634 -3.380 -0.349 -2.191 ML 149 147 6 152 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 150 147 6 152 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 151 147 6 152 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 152 152 5 152 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 153 153 6 153 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 13 a u - - MP 154 153 6 158 6 2 2 22 41 -9.342 -9.281 -0.058 -8.058 -8.338 -5.084 -2.016 -2.014 -2.189 1.849 -1.347 -3.008 1.233 -2.519 -2.259 1.526 -1.197 0.737 1.049 -2.307 -0.322 -1.399 ML 155 153 6 158 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 156 153 6 158 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 157 153 6 158 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 158 158 5 158 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 159 159 6 159 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 12 C G - - MP 160 159 6 164 4 2 2 20 39 -7.412 -7.619 -0.038 -6.033 -5.519 -5.506 -5.035 -1.680 -3.576 -5.318 3.766 -4.484 -5.135 -1.543 -5.273 -3.486 -0.182 -5.520 -1.324 -3.949 ML 161 159 6 164 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 162 159 6 164 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 163 159 6 164 4 0 0 20 38 -5.158 -4.840 -2.855 -0.324 IL 164 164 5 164 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 165 165 6 165 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 7 - C - - - ML 166 165 6 168 3 1 1 17 36 -8.399 -0.154 -3.351 -1.258 1.106 -2.120 0.262 D 167 165 6 168 3 0 0 16 35 -6.955 -2.468 -0.302 IL 168 168 3 168 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - A - - - ML 169 168 3 171 3 1 1 16 34 -8.263 -0.017 -6.917 1.522 -2.016 -0.892 -1.551 D 170 168 3 171 3 0 0 15 33 -7.685 -1.419 -0.687 IL 171 171 3 171 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 9 - C - - - ML 172 171 3 174 3 1 1 14 33 -8.355 -0.016 -7.009 -1.440 1.473 -1.496 -0.995 D 173 171 3 174 3 0 0 14 32 -7.241 -1.609 -0.587 IL 174 174 3 174 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 10 - u - - - ML 175 174 3 177 3 1 1 13 31 -8.399 -0.015 -7.053 -0.197 -0.356 -0.408 0.671 D 176 174 3 177 3 0 0 13 31 -6.955 -2.468 -0.302 IL 177 177 3 177 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 11 - C - - - ML 178 177 3 180 2 1 1 1 1 * 0.000 -1.782 1.520 -2.651 -0.554 D 179 177 3 180 2 0 0 0 0 * 0.000 IL 180 180 3 180 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 18 ] - - - - - - E 181 180 3 -1 0 0 0 0 0 [ BEGR 19 ] - - - - - - S 182 134 1 183 3 0 0 34 52 -8.480 -0.014 -7.134 IL 183 183 2 183 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - C - - - ML 184 183 2 186 3 1 1 33 52 -8.480 -0.014 -7.134 -0.960 1.054 -1.296 0.003 D 185 183 2 186 3 0 0 32 51 -6.174 -1.687 -0.566 IL 186 186 3 186 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - U - - - ML 187 186 3 189 3 1 1 32 51 -8.480 -0.014 -7.134 -0.543 -0.734 -1.339 1.212 D 188 186 3 189 3 0 0 31 50 -6.174 -1.687 -0.566 IL 189 189 3 189 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - c - - - ML 190 189 3 192 5 1 1 31 50 -7.553 -0.028 -7.368 -7.580 -8.472 -0.706 0.783 -0.282 -0.244 D 191 189 3 192 5 0 0 30 49 -4.959 -0.803 -4.221 -2.596 -2.508 IL 192 192 3 192 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 36 c g - - MP 193 192 3 197 6 2 2 30 49 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -2.286 -2.432 -2.444 0.729 -0.601 -3.271 2.611 -1.322 -0.958 0.695 -3.037 -0.890 1.222 -2.598 -0.194 -1.603 ML 194 192 3 197 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 195 192 3 197 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 196 192 3 197 6 0 0 27 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 197 197 5 197 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 35 G C - - MP 199 198 6 203 6 2 2 28 47 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -4.290 -2.929 -4.281 0.498 -5.014 -4.570 -0.428 -4.775 -4.241 3.455 -1.377 0.165 -0.697 -4.063 -2.392 -3.248 ML 200 198 6 203 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 201 198 6 203 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 202 198 6 203 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 203 203 5 203 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 34 G C - - MP 205 204 6 209 6 2 2 26 45 -9.342 -9.281 -0.018 -8.058 -8.338 -8.733 -4.648 -3.099 -4.640 0.252 -5.337 -4.633 -0.640 -5.153 -4.472 3.591 -4.755 -0.839 -0.943 -1.236 -2.645 -3.613 ML 206 204 6 209 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 207 204 6 209 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 208 204 6 209 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 209 209 5 209 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 210 210 6 210 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 33 u g - - MP 211 210 6 215 4 2 2 24 43 -7.497 -7.704 -0.036 -6.118 -3.629 -3.697 -3.586 -0.223 -2.732 -4.202 2.034 -3.397 -3.624 -0.102 -4.047 -1.928 0.776 -3.829 2.562 0.570 ML 212 210 6 215 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 213 210 6 215 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 214 210 6 215 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520 IL 215 215 5 215 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 216 216 6 216 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 24 - U - - - ML 217 216 6 219 3 1 1 22 40 -8.842 -0.013 -7.159 -1.349 -1.492 -1.463 1.531 D 218 216 6 219 3 0 0 21 39 -5.620 -0.734 -1.403 IL 219 219 3 219 3 1 1 23 41 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 32 - C - - MR 220 219 3 222 5 1 1 21 39 -7.553 -0.028 -7.368 -7.580 -8.472 -2.023 1.601 -2.894 -0.770 D 221 219 3 222 5 0 0 20 39 -5.352 -0.707 -2.978 -4.409 -2.404 IR 222 222 3 222 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 31 C G - - MP 223 222 3 227 4 2 2 20 38 -7.497 -7.704 -0.036 -6.118 -5.700 -5.702 -5.182 -1.872 -3.696 -5.440 3.793 -4.624 -5.295 -1.750 -5.406 -3.694 -0.330 -5.688 -1.457 -4.106 ML 224 222 3 227 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 225 222 3 227 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 226 222 3 227 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 227 227 5 227 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 228 228 6 228 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - C - - - ML 229 228 6 231 3 1 1 16 34 -3.402 -0.155 -7.134 -1.063 1.170 -1.373 -0.177 D 230 228 6 231 3 0 0 15 33 -6.174 -1.687 -0.566 IL 231 231 3 231 3 1 1 17 35 -1.825 -0.568 -4.526 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - u - - - ML 232 231 3 234 3 1 1 14 33 -8.480 -0.014 -7.134 -0.265 -0.359 -0.613 0.794 D 233 231 3 234 3 0 0 15 33 -6.174 -1.687 -0.566 IL 234 234 3 234 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - c - - - ML 235 234 3 237 3 1 1 13 31 -8.480 -0.014 -7.134 -0.327 0.316 0.114 -0.192 D 236 234 3 237 3 0 0 13 32 -6.174 -1.687 -0.566 IL 237 237 3 237 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - c - - - ML 238 237 3 240 2 1 1 1 1 * 0.000 -0.055 0.432 -1.027 0.260 D 239 237 3 240 2 0 0 0 0 * 0.000 IL 240 240 3 240 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 34 ] - - - - - - E 241 240 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sX9 ACC RF02228 DESC Xanthomonas sRNA sX9 LENG 76 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 11 01:46:33 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02228/CM NSEQ 16 EFFN 4.699219 CKSUM 4084076024 STATS LOCAL MSV -8.4070 0.71886 STATS LOCAL VITERBI -9.1430 0.71886 STATS LOCAL FORWARD -3.3658 0.71886 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.75310 1.07451 1.42360 1.40873 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 0.00000 * 1 0.06222 4.10392 3.75582 3.89070 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 2 3.32902 2.43415 2.61355 0.21912 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 3 3.16972 4.08298 0.07967 4.03397 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 4 2.45885 1.32425 1.87386 0.70333 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 5 1.25197 1.72707 1.08562 1.61666 5 g - - < 1.38629 1.38629 1.38629 1.38629 0.08922 4.24189 2.64544 1.46634 0.26236 1.09861 0.40547 6 4.00076 0.10761 3.86512 2.76846 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03096 4.18363 4.18363 1.46634 0.26236 1.93665 0.15570 7 2.46718 0.55330 3.09019 1.22203 7 C - - _ 1.38629 1.38629 1.38629 1.38629 0.13347 4.18363 2.21001 1.46634 0.26236 1.93665 0.15570 8 0.28087 3.00198 2.05005 2.71119 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03425 4.08441 4.08441 1.46634 0.26236 0.93865 0.49619 9 2.69447 0.27943 2.53969 2.32981 9 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03198 4.15173 4.15173 1.46634 0.26236 1.07831 0.41577 10 1.55878 1.64152 1.65959 0.90213 10 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03096 4.18363 4.18363 1.46634 0.26236 1.93665 0.15570 11 2.89838 0.27246 3.51484 1.87319 11 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03096 4.18363 4.18363 1.46634 0.26236 1.93665 0.15570 12 3.04740 4.02427 0.09245 3.77466 12 G - - > 1.38629 1.38629 1.38629 1.38629 0.03096 4.18363 4.18363 1.46634 0.26236 0.34020 1.24350 13 1.75698 1.55758 1.49533 0.93493 13 u - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 14 0.62713 1.98916 1.50258 2.23952 14 A - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 15 4.14764 0.09843 3.92431 2.84409 15 C - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 16 0.20647 3.32671 2.26126 3.07003 16 A - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 17 2.21864 0.58536 2.36429 1.42578 17 C - - , 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 18 1.83679 1.95861 2.40445 0.49544 18 U - - , 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 19 2.02114 0.76943 1.56743 1.63148 19 c - - , 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 20 2.11557 0.66964 1.82547 1.57793 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 21 2.45271 3.19770 0.19092 3.06005 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 22 2.68252 3.40335 0.18276 2.72750 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 23 3.06727 1.34055 2.90270 0.45118 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 24 2.56045 2.62524 2.49576 0.26413 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 25 4.14562 0.09422 4.01396 2.88202 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 26 2.30705 0.50379 2.42362 1.57210 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.13278 2.20759 4.24189 0.24371 1.53114 1.09861 0.40547 27 1.61115 1.64561 1.81394 0.81095 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 28 1.68841 1.11661 1.26500 1.58202 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 29 1.44895 1.03826 2.15426 1.22036 30 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 30 3.17524 4.19191 0.07945 3.93873 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 31 3.08498 0.22389 3.69445 2.04017 32 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 32 2.32759 3.06400 0.36424 1.82607 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 33 3.51951 0.17481 3.23244 2.39347 34 C - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 34 3.29455 0.30494 2.59021 1.89218 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 35 1.47333 2.18858 0.70596 1.80104 36 g - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 36 1.93955 1.91457 1.60217 0.67852 37 U - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 37 2.90609 0.23073 2.66393 2.50493 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 38 2.53967 0.20229 3.59912 2.56522 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 39 1.15344 3.04564 0.56537 2.67750 40 G - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 40 2.15190 0.65002 2.25860 1.35788 41 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 41 0.94302 1.90539 1.36468 1.57832 42 a - - - 1.38629 1.38629 1.38629 1.38629 0.22984 4.24189 1.65568 1.46634 0.26236 1.09861 0.40547 42 2.63965 0.27504 2.71472 2.27447 43 C - - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04760 4.04760 1.46634 0.26236 0.14029 2.03335 43 2.31008 0.24557 3.46419 2.43964 44 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 44 3.03052 0.24177 3.64574 1.96346 45 C - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 45 0.49598 2.09685 1.85682 2.18913 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 46 2.13184 0.74685 1.29829 2.00600 47 c - - - 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 47 2.83427 0.31977 2.67131 1.92578 48 C - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 48 2.81841 1.56888 2.64030 0.41448 49 U - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 49 2.14553 2.91573 0.26323 2.80896 50 G - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 50 0.22296 3.26017 2.15842 3.07986 51 A - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 51 2.81582 0.45438 2.12671 1.68161 52 C - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 52 1.45441 2.33396 0.47860 2.99772 53 G - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 53 1.39648 1.73923 1.02648 1.52046 54 g - - < 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 54 3.08498 0.22389 3.69445 2.04017 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06858 4.24189 2.95842 1.46634 0.26236 1.09861 0.40547 55 2.18185 1.59556 2.44539 0.51470 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03034 4.20365 4.20365 1.46634 0.26236 0.44093 1.03125 56 3.53328 4.50207 0.05950 4.04731 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 57 2.31239 0.48667 2.08555 1.81975 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 58 3.44505 3.27743 3.98497 0.09236 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 59 3.85508 0.07581 4.37552 3.23780 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 60 3.53328 4.50207 0.05950 4.04731 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 61 3.03052 0.24177 3.64574 1.96346 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 62 2.53224 2.61017 2.43112 0.27568 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 63 0.48510 1.94236 2.06394 2.17114 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 64 2.50865 0.57117 3.13738 1.17002 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 65 1.68050 3.29916 0.32317 2.93827 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 66 2.76717 2.07991 3.28996 0.25494 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 67 1.75915 2.28160 1.72386 0.60274 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 68 1.62830 1.70016 1.34466 1.02039 69 u - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 69 3.21634 2.26610 2.96197 0.21758 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.06858 4.24189 2.95842 1.46634 0.26236 1.09861 0.40547 70 2.21874 2.85101 0.27083 2.64896 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.03034 4.20365 4.20365 1.46634 0.26236 0.44093 1.03125 71 2.32116 2.47965 3.05510 0.26013 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 72 3.02049 1.09466 2.10166 0.70458 73 u - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 73 0.53972 2.80636 1.26595 2.59438 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 74 1.60007 2.83360 0.49002 2.06590 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 75 3.85508 0.07581 4.37552 3.23780 76 C - - : 1.38629 1.38629 1.38629 1.38629 0.02918 4.24189 4.24189 1.46634 0.26236 1.09861 0.40547 76 2.45791 0.21655 3.55218 2.52031 77 C - - : 1.38629 1.38629 1.38629 1.38629 0.05410 2.94393 * 0.48441 0.95727 0.00000 * //