INFERNAL1/a [1.1.4 | Dec 2020] NAME ZNRD1-AS1_2 ACC RF02219 DESC ZNRD1 antisense RNA 1 conserved region 2 STATES 232 NODES 78 CLEN 76 W 155 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:53:02 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 34 EFFN 4.544678 CKSUM 137911199 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 62.80 NC 53.50 EFP7GF -10.9158 0.71861 ECMLC 0.73004 -8.76775 0.01453 1600000 730499 0.001643 ECMGC 0.36910 -21.45013 -6.80440 1600000 89073 0.004491 ECMLI 0.65360 -7.98545 1.10765 1600000 457398 0.002624 ECMGI 0.39663 -13.59238 -0.86489 1600000 62292 0.006421 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 155 238 -7.749 -7.956 -0.030 -6.370 IL 1 1 2 1 4 1 32 158 240 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 32 157 240 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 32 156 238 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 4 2 3 5 3 0 27 153 235 -11.551 -1.585 -0.585 IL 5 5 3 5 3 2 33 162 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 31 154 237 -6.076 -0.043 -6.076 0.868 -0.879 -0.886 0.124 D 7 5 3 8 3 0 26 151 234 -11.551 -1.585 -0.585 IL 8 8 3 8 3 2 32 161 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 30 153 236 -6.076 -0.043 -6.076 0.698 -0.761 -0.128 -0.195 D 10 8 3 11 3 0 25 150 233 -11.551 -1.585 -0.585 IL 11 11 3 11 3 2 32 160 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - g - - - ML 12 11 3 14 3 1 29 152 234 -6.076 -0.043 -6.076 -0.006 -0.808 0.623 -0.164 D 13 11 3 14 3 0 24 149 231 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 31 159 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 28 151 233 -6.076 -0.043 -6.076 1.887 -3.495 -3.160 -3.294 D 16 14 3 17 3 0 23 148 230 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 30 157 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 28 149 232 -6.076 -0.043 -6.076 -2.137 -1.859 -1.678 1.671 D 19 17 3 20 3 0 23 146 228 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 29 156 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 27 148 230 -6.076 -0.043 -6.076 -1.943 1.234 -2.157 0.217 D 22 20 3 23 3 0 22 145 227 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 28 155 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 26 147 229 -6.076 -0.043 -6.076 -2.216 -1.193 -2.438 1.661 D 25 23 3 26 3 0 21 144 226 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 28 154 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 25 146 228 -6.076 -0.043 -6.076 -2.235 -1.238 -2.458 1.670 D 28 26 3 29 3 0 20 143 224 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 27 152 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 24 144 226 -6.076 -0.043 -6.076 -1.725 0.508 -1.923 1.009 D 31 29 3 32 3 0 19 141 223 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 26 151 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 24 143 225 -4.485 -0.088 -6.076 -2.703 -2.197 -2.897 1.805 D 34 32 3 35 3 0 19 140 222 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 24 143 225 -3.506 -0.134 -11.150 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - U - - - ML 36 35 3 38 3 1 23 142 224 -6.076 -0.043 -6.076 -2.703 -2.197 -2.897 1.805 D 37 35 3 38 3 0 18 139 220 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 25 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - c - - - ML 39 38 3 41 3 1 22 141 222 -6.076 -0.043 -6.076 -1.767 0.868 -1.969 0.700 D 40 38 3 41 3 0 17 138 219 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 24 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 42 41 3 44 3 1 21 140 221 -6.076 -0.043 -6.076 -2.703 -2.197 -2.897 1.805 D 43 41 3 44 3 0 16 137 218 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 23 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - C - - - ML 45 44 3 47 3 1 21 138 220 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 46 44 3 47 3 0 16 135 216 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 22 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - C - - - ML 48 47 3 50 3 1 20 137 218 -6.076 -0.043 -6.076 -1.888 1.154 -2.099 0.346 D 49 47 3 50 3 0 15 134 215 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 21 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 51 50 3 53 3 1 19 136 217 -6.076 -0.043 -6.076 1.578 -1.123 -2.066 -1.659 D 52 50 3 53 3 0 14 133 213 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 21 143 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 1 18 135 215 -6.076 -0.043 -6.076 -0.732 -2.628 1.600 -2.295 D 55 53 3 56 3 0 13 131 212 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 20 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 57 56 3 59 3 1 18 133 214 -6.076 -0.043 -6.076 -0.594 -1.517 -1.780 1.431 D 58 56 3 59 3 0 13 130 211 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 19 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - G - - - ML 60 59 3 62 3 1 17 132 213 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 61 59 3 62 3 0 12 129 209 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 18 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - G - - - ML 63 62 3 65 3 1 16 131 211 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 64 62 3 65 3 0 11 128 208 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 18 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - g - - - ML 66 65 3 68 3 1 15 129 210 -6.076 -0.043 -6.076 0.230 -1.487 0.941 -0.862 D 67 65 3 68 3 0 10 126 206 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 17 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 69 68 3 71 3 1 15 128 208 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 70 68 3 71 3 0 10 125 205 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 16 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 72 71 3 74 3 1 14 127 207 -6.076 -0.043 -6.076 1.887 -3.495 -3.160 -3.294 D 73 71 3 74 3 0 9 124 204 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 15 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - c - - - ML 75 74 3 77 3 1 13 125 205 -6.076 -0.043 -6.076 -0.319 0.853 -0.934 -0.204 D 76 74 3 77 3 0 8 122 202 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 15 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 12 124 204 -6.076 -0.043 -6.076 -1.313 -0.820 -1.847 1.461 D 79 77 3 80 3 0 7 121 201 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 14 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - G - - - ML 81 80 3 83 3 1 12 123 203 -6.076 -0.043 -6.076 -0.786 -1.902 1.526 -1.875 D 82 80 3 83 3 0 7 120 199 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 13 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - u - - - ML 84 83 3 86 3 1 11 122 201 -6.076 -0.043 -6.076 -0.552 0.154 0.069 0.209 D 85 83 3 86 3 0 6 118 198 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 13 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - u - - - ML 87 86 3 89 3 1 10 120 200 -6.076 -0.043 -6.076 -0.366 -1.047 -0.078 0.842 D 88 86 3 89 3 0 5 117 196 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 12 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - G - - - ML 90 89 3 92 3 1 10 119 198 -6.076 -0.043 -6.076 -0.181 -2.328 1.414 -1.980 D 91 89 3 92 3 0 5 116 195 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 11 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - a - - - ML 93 92 3 95 3 1 9 118 197 -6.076 -0.043 -6.076 0.788 -0.888 0.037 -0.501 D 94 92 3 95 3 0 4 115 193 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 11 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 8 116 195 -6.076 -0.043 -6.076 -2.507 1.673 -2.771 -1.030 D 97 95 3 98 3 0 3 113 192 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 10 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 99 98 3 101 3 1 8 115 194 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 100 98 3 101 3 0 3 112 190 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 9 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 102 101 3 104 3 1 7 114 192 -6.076 -0.043 -6.076 -0.851 -0.587 -1.519 1.282 D 103 101 3 104 3 0 2 111 189 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 9 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - g - - - ML 105 104 3 107 3 1 7 112 191 -6.076 -0.043 -6.076 0.166 -0.847 0.720 -0.567 D 106 104 3 107 3 0 1 109 187 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 8 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - c - - - ML 108 107 3 110 3 1 6 111 189 -6.076 -0.043 -6.076 -0.649 0.904 -0.671 -0.212 D 109 107 3 110 3 0 1 108 186 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 7 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - a - - - ML 111 110 3 113 3 1 5 110 188 -6.076 -0.043 -6.076 0.616 -1.028 -0.474 0.329 D 112 110 3 113 3 0 0 107 184 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 7 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - G - - - ML 114 113 3 116 3 1 5 108 186 -6.076 -0.043 -6.076 -1.458 -3.002 1.747 -2.696 D 115 113 3 116 3 0 0 105 183 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 6 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - C - - - ML 117 116 3 119 3 1 4 107 185 -6.076 -0.043 -6.076 -1.349 1.652 -2.575 -1.750 D 118 116 3 119 3 0 0 104 181 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 6 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - A - - - ML 120 119 3 122 3 1 4 106 183 -6.076 -0.043 -6.076 1.214 -1.374 -0.460 -0.818 D 121 119 3 122 3 0 0 102 180 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 5 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 123 122 3 125 3 1 3 104 182 -6.076 -0.043 -6.076 1.740 -2.737 -1.609 -2.460 D 124 122 3 125 3 0 0 101 178 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 5 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 126 125 3 128 3 1 3 103 180 -6.076 -0.043 -6.076 -0.935 -0.710 -1.598 1.342 D 127 125 3 128 3 0 0 100 177 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 4 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - C - - - ML 129 128 3 131 3 1 2 102 179 -6.076 -0.043 -6.076 -2.318 1.569 -2.565 -0.593 D 130 128 3 131 3 0 0 98 175 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 4 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - C - - - ML 132 131 3 134 3 1 2 100 177 -6.076 -0.043 -6.076 -2.614 1.721 -2.885 -1.303 D 133 131 3 134 3 0 0 97 174 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 3 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - u - - - ML 135 134 3 137 3 1 2 99 176 -6.076 -0.043 -6.076 -0.535 -1.075 0.099 0.819 D 136 134 3 137 3 0 0 96 172 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 1 97 174 -6.076 -0.043 -6.076 1.440 -1.336 -1.030 -1.318 D 139 137 3 140 3 0 0 94 171 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 2 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - G - - - ML 141 140 3 143 3 1 1 96 173 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 142 140 3 143 3 0 0 93 169 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 2 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 144 143 3 146 3 1 1 95 171 -6.076 -0.043 -6.076 -1.063 -2.799 1.677 -2.477 D 145 143 3 146 3 0 0 91 167 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 2 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 147 146 3 149 3 1 1 93 169 -6.076 -0.043 -6.076 -0.557 -2.536 1.551 -2.197 D 148 146 3 149 3 0 0 90 166 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - U - - - ML 150 149 3 152 3 1 1 92 168 -6.076 -0.043 -6.076 -2.703 -2.197 -2.897 1.805 D 151 149 3 152 3 0 0 89 164 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - C - - - ML 153 152 3 155 3 1 1 90 166 -6.076 -0.043 -6.076 -2.501 1.711 -1.850 -1.876 D 154 152 3 155 3 0 0 87 163 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - U - - - ML 156 155 3 158 3 1 1 89 165 -6.076 -0.043 -6.076 -2.008 -0.687 -2.222 1.544 D 157 155 3 158 3 0 0 86 161 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - U - - - ML 159 158 3 161 3 1 1 88 163 -6.076 -0.043 -6.076 -1.289 -0.627 -0.926 1.273 D 160 158 3 161 3 0 0 84 159 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - u - - - ML 162 161 3 164 3 1 1 86 161 -6.076 -0.043 -6.076 -1.030 -1.004 0.359 0.790 D 163 161 3 164 3 0 0 83 158 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 165 164 3 167 3 1 1 85 160 -6.076 -0.043 -6.076 1.011 -0.933 -0.416 -0.492 D 166 164 3 167 3 0 0 81 156 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 168 167 3 170 3 1 1 83 158 -6.076 -0.043 -6.076 -0.837 -2.683 1.627 -2.353 D 169 167 3 170 3 0 0 80 154 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - a - - - ML 171 170 3 173 3 1 1 82 156 -6.076 -0.043 -6.076 0.892 -1.303 -1.371 0.435 D 172 170 3 173 3 0 0 78 153 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - u - - - ML 174 173 3 176 3 1 1 80 155 -6.076 -0.043 -6.076 0.138 -0.705 -0.580 0.694 D 175 173 3 176 3 0 0 77 151 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - g - - - ML 177 176 3 179 3 1 1 79 153 -4.131 -0.108 -6.076 -0.399 -1.113 0.535 0.412 D 178 176 3 179 3 0 0 75 149 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 80 154 -0.967 -1.035 -12.541 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - c - - - ML 180 179 3 182 3 1 1 77 152 -6.076 -0.043 -6.076 -0.005 0.281 -0.708 0.235 D 181 179 3 182 3 0 0 74 148 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - U - - - ML 183 182 3 185 3 1 1 76 150 -6.076 -0.043 -6.076 -2.090 -1.833 -1.589 1.656 D 184 182 3 185 3 0 0 72 146 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - U - - - ML 186 185 3 188 3 1 1 74 148 -6.076 -0.043 -6.076 -0.878 -0.647 -0.735 1.148 D 187 185 3 188 3 0 0 71 144 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - U - - - ML 189 188 3 191 3 1 1 73 146 -6.076 -0.043 -6.076 -2.703 -2.197 -2.897 1.805 D 190 188 3 191 3 0 0 69 142 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - a - - - ML 192 191 3 194 3 1 1 71 144 -6.076 -0.043 -6.076 0.720 -0.786 0.047 -0.434 D 193 191 3 194 3 0 0 67 140 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 68 - G - - - ML 195 194 3 197 3 1 1 70 142 -6.076 -0.043 -6.076 -0.423 -1.208 1.287 -1.395 D 196 194 3 197 3 0 0 66 138 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 69 - C - - - ML 198 197 3 200 3 1 1 68 140 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 199 197 3 200 3 0 0 64 136 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 70 - C - - - ML 201 200 3 203 3 1 1 66 138 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 202 200 3 203 3 0 0 62 134 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 71 - C - - - ML 204 203 3 206 3 1 1 64 136 -6.076 -0.043 -6.076 -2.944 1.824 -3.192 -2.178 D 205 203 3 206 3 0 0 60 132 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 72 - A - - - ML 207 206 3 209 3 1 1 63 134 -6.076 -0.043 -6.076 1.887 -3.495 -3.160 -3.294 D 208 206 3 209 3 0 0 58 129 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 73 - G - - - ML 210 209 3 212 3 1 1 61 132 -6.076 -0.043 -6.076 -0.569 -1.522 1.406 -1.608 D 211 209 3 212 3 0 0 56 127 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 74 - G - - - ML 213 212 3 215 3 1 1 59 130 -6.076 -0.043 -6.076 -1.063 -2.799 1.677 -2.477 D 214 212 3 215 3 0 0 54 124 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 75 - C - - - ML 216 215 3 218 3 1 1 56 127 -6.076 -0.043 -6.076 -1.554 1.509 -2.231 -0.736 D 217 215 3 218 3 0 0 51 121 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 67 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 76 - C - - - ML 219 218 3 221 3 1 1 54 124 -6.076 -0.043 -6.076 -1.832 1.405 -1.650 -0.412 D 220 218 3 221 3 0 0 48 118 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 77 - A - - - ML 222 221 3 224 3 1 1 51 121 -6.076 -0.043 -6.076 1.887 -3.495 -3.160 -3.294 D 223 221 3 224 3 0 0 43 113 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 78 - A - - - ML 225 224 3 227 3 1 1 47 116 -6.076 -0.043 -6.076 1.610 -2.372 -0.958 -2.062 D 226 224 3 227 3 0 0 32 101 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 79 - U - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 -1.172 -0.479 -1.682 1.338 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME ZNRD1-AS1_2 ACC RF02219 DESC ZNRD1 antisense RNA 1 conserved region 2 LENG 76 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 19:53:02 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 34 EFFN 4.544678 STATS LOCAL MSV -8.8341 0.71861 STATS LOCAL VITERBI -9.3445 0.71861 STATS LOCAL FORWARD -3.7479 0.71861 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.49508 1.38711 1.42293 1.25538 1.38629 1.38629 1.38629 1.38629 0.01724 5.37141 4.38624 0.39730 1.11515 0.00000 * 1 3.42696 0.12229 3.59858 2.89567 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 2 0.78455 1.99524 2.00010 1.30059 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 3 0.90277 1.91388 1.47532 1.52169 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 4 1.39014 1.94647 0.95455 1.49971 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 5 0.07864 3.80894 3.57683 3.66935 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 6 2.86778 2.67514 2.54922 0.22799 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 7 2.73291 0.53061 2.88160 1.23554 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 8 2.92210 2.21331 3.07649 0.23481 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 9 2.93577 2.24417 3.09039 0.22890 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 10 2.58201 1.03429 2.71917 0.68722 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 11 3.25986 2.90925 3.39405 0.13523 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06131 3.10900 4.21134 0.09218 2.42974 1.09861 0.40547 12 3.25986 2.90925 3.39405 0.13523 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 13 2.61131 0.78432 2.75076 0.90078 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 14 3.25986 2.90925 3.39405 0.13523 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 15 3.42696 0.12229 3.59858 2.89567 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 16 2.69515 0.58649 2.84088 1.14627 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 17 0.29259 2.16440 2.81867 2.53614 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 18 1.89358 3.20810 0.27696 2.97685 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 19 1.79816 2.43751 2.62034 0.39417 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 20 3.11821 3.84544 0.09588 3.65673 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 21 3.11821 3.84544 0.09588 3.65673 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 22 1.22696 2.41715 0.73374 1.98390 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 23 3.11821 3.84544 0.09588 3.65673 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 24 0.07864 3.80894 3.57683 3.66935 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 25 1.60712 0.79478 2.03355 1.52793 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 26 2.29664 1.95465 2.66620 0.37357 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 27 1.93086 2.70476 0.32858 2.68616 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 28 1.76865 1.27964 1.33833 1.24128 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 29 1.64025 2.11184 1.44021 0.80257 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 30 1.51197 2.99978 0.40592 2.75890 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 31 0.83978 2.00194 1.36092 1.73333 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 32 3.12375 0.22692 3.30667 2.10058 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 33 3.42696 0.12229 3.59858 2.89567 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 34 1.97611 1.79341 2.43903 0.49798 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 35 1.27104 1.97347 0.88732 1.77946 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 36 1.83621 0.76003 1.85133 1.53294 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 37 0.95901 2.09874 1.71467 1.15806 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 38 2.39722 3.46739 0.17524 3.25518 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 39 2.32136 0.24135 3.17110 2.59918 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 40 0.54473 2.33879 1.70520 1.95318 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 41 0.18022 3.28328 2.50142 3.09136 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 42 2.03470 1.87836 2.49378 0.45595 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 43 2.99311 0.29851 3.16441 1.79752 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 44 3.19837 0.19358 3.38633 2.28935 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 45 1.75689 2.13153 1.31751 0.81879 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 46 0.38820 2.31248 2.10040 2.29957 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 47 3.11821 3.84544 0.09588 3.65673 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 48 2.12297 3.32655 0.22376 3.10328 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 49 1.77219 3.14378 0.31144 2.90897 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 50 3.25986 2.90925 3.39405 0.13523 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 51 3.11994 0.20047 2.66832 2.68642 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 52 2.77796 1.86251 2.92638 0.31613 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 53 2.27977 1.82066 2.02847 0.50379 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 54 2.10017 2.08200 1.13729 0.83888 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 55 0.68536 2.03300 1.67481 1.72706 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 56 1.96650 3.24606 0.25853 3.01717 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 57 0.76785 2.28957 2.33665 1.08463 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 58 1.29057 1.87529 1.78825 0.90554 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 59 1.66262 2.15756 1.01572 1.10079 - g - - : 1.38629 1.38629 1.38629 1.38629 0.07460 2.86367 4.21134 0.71693 0.66992 1.09861 0.40547 60 1.38979 1.19168 1.87708 1.22374 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 61 2.83508 2.65649 2.48805 0.23823 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 62 1.99484 1.83494 1.89544 0.59043 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 63 3.25986 2.90925 3.39405 0.13523 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 64 0.88729 1.93098 1.35397 1.68732 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 65 1.67931 2.22338 0.49403 2.35293 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 66 3.42696 0.12229 3.59858 2.89567 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 67 3.42696 0.12229 3.59858 2.89568 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 68 3.42696 0.12229 3.59858 2.89567 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 69 0.07864 3.80894 3.57683 3.66935 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 70 1.78088 2.44147 0.41182 2.50065 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 71 2.12320 3.32667 0.22371 3.10341 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 72 2.46350 0.34041 2.93248 1.89633 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 73 2.65589 0.41212 2.52997 1.67207 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 74 0.07864 3.80894 3.57683 3.66935 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 75 0.27029 3.03039 2.05057 2.81540 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21134 4.21134 1.46634 0.26236 1.09861 0.40547 76 2.19885 1.71841 2.55210 0.45918 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //