INFERNAL1/a [1.1.5 | Sep 2023] NAME ZNRD1-AS1_1 ACC RF02218 DESC ZNRD1 antisense RNA 1 conserved region 1 STATES 208 NODES 70 CLEN 68 W 148 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 14:40:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02218/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 3.472656 CKSUM 2060624896 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.00 NC 49.90 EFP7GF -9.6222 0.71877 ECMLC 0.66357 -9.06707 0.47572 1600000 674974 0.001778 ECMGC 0.40083 -16.95301 -3.16133 1600000 100671 0.003973 ECMLI 0.57311 -8.64660 1.75667 1600000 466169 0.002574 ECMGI 0.46119 -8.69138 2.30089 1600000 63638 0.006286 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 148 232 -7.472 -7.679 -0.037 -6.093 IL 1 1 2 1 4 1 26 151 234 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 150 234 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 25 149 232 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 4 2 3 5 3 0 21 146 229 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 27 155 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 25 147 231 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 7 5 3 8 3 0 20 144 227 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 26 154 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 24 146 229 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 10 8 3 11 3 0 19 143 226 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 25 153 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 23 145 228 -5.826 -0.052 -5.826 -0.259 -0.264 -1.018 0.878 D 13 11 3 14 3 0 19 142 225 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 25 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 22 144 226 -5.826 -0.052 -5.826 -0.479 -2.129 1.467 -1.788 D 16 14 3 17 3 0 18 140 223 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 24 150 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - C - - - ML 18 17 3 20 3 1 21 142 225 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 19 17 3 20 3 0 17 139 222 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 23 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 21 141 224 -5.826 -0.052 -5.826 -1.499 -0.252 -1.690 1.320 D 22 20 3 23 3 0 17 138 220 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 22 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - C - - - ML 24 23 3 26 3 1 20 140 222 -5.826 -0.052 -5.826 -1.740 1.353 -1.951 -0.172 D 25 23 3 26 3 0 16 137 219 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 21 146 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 19 138 221 -5.826 -0.052 -5.826 -1.390 0.299 -1.576 1.038 D 28 26 3 29 3 0 15 135 217 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 21 145 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 18 137 219 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 31 29 3 32 3 0 15 134 216 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 20 144 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - C - - - ML 33 32 3 35 3 1 17 136 218 -5.826 -0.052 -5.826 -0.379 1.290 -1.663 -1.092 D 34 32 3 35 3 0 14 133 215 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 19 142 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 16 134 216 -5.826 -0.209 -3.096 1.201 -1.247 -1.298 -0.196 D 37 35 3 38 3 0 13 132 214 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 18 141 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 16 133 215 -5.675 -0.058 -5.675 -1.453 1.215 -1.648 -0.007 D 40 38 3 41 3 0 13 131 213 -13.076 -0.380 -2.110 IL 41 41 3 41 3 1 18 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 15 132 214 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 43 41 3 44 3 0 10 129 210 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 17 139 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - G - - - ML 45 44 3 47 3 1 15 131 212 -5.826 -0.052 -5.826 -1.225 -1.658 1.347 -0.492 D 46 44 3 47 3 0 10 127 209 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 16 137 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 14 129 211 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 49 47 3 50 3 0 9 126 207 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 16 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 13 128 209 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 52 50 3 53 3 0 8 125 206 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 15 135 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 54 53 3 56 3 1 13 127 208 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 55 53 3 56 3 0 8 123 204 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 14 133 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 12 125 206 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 58 56 3 59 3 0 7 122 203 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 14 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 1 11 124 205 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 61 59 3 62 3 0 6 121 201 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 13 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 11 123 203 -5.826 -0.052 -5.826 -1.397 0.233 -1.583 1.078 D 64 62 3 65 3 0 6 119 200 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 12 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 10 121 202 -5.826 -0.052 -5.826 -1.531 1.345 -0.600 -1.140 D 67 65 3 68 3 0 5 118 198 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 12 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - A - - - ML 69 68 3 71 3 1 9 120 200 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 70 68 3 71 3 0 5 117 197 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 11 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 72 71 3 74 3 1 9 119 199 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 73 71 3 74 3 0 4 115 195 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 10 126 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - g - - - ML 75 74 3 77 3 1 8 117 197 -5.826 -0.052 -5.826 -0.315 -1.017 0.652 0.178 D 76 74 3 77 3 0 3 114 194 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 10 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 8 116 196 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 79 77 3 80 3 0 3 113 192 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 9 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 81 80 3 83 3 1 7 115 194 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 82 80 3 83 3 0 2 111 191 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 9 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - C - - - ML 84 83 3 86 3 1 6 113 193 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 85 83 3 86 3 0 2 110 189 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 8 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 87 86 3 89 3 1 6 112 191 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 88 86 3 89 3 0 1 109 188 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 7 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 90 89 3 92 3 1 5 111 190 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 91 89 3 92 3 0 1 107 186 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 7 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - G - - - ML 93 92 3 95 3 1 5 109 188 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 94 92 3 95 3 0 0 106 185 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 6 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - u - - - ML 96 95 3 98 3 1 4 108 187 -5.826 -0.052 -5.826 -1.392 0.630 -1.579 0.797 D 97 95 3 98 3 0 0 105 183 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 6 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - a - - - ML 99 98 3 101 3 1 4 106 185 -5.826 -0.052 -5.826 0.828 -0.298 -0.966 -0.153 D 100 98 3 101 3 0 0 103 182 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 5 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 1 3 105 184 -5.826 -0.052 -5.826 -0.512 -2.148 1.479 -1.808 D 103 101 3 104 3 0 0 102 180 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 5 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 105 104 3 107 3 1 3 104 182 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 106 104 3 107 3 0 0 100 178 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 4 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 108 107 3 110 3 1 3 102 180 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 109 107 3 110 3 0 0 99 177 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 2 101 179 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 112 110 3 113 3 0 0 98 175 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - a - - - ML 114 113 3 116 3 1 1 99 177 -5.826 -0.366 -2.278 0.546 -0.373 -0.904 0.302 D 115 113 3 116 3 0 0 96 174 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 3 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - C - - - ML 117 116 3 119 3 1 2 98 176 -5.524 -0.064 -5.524 -1.818 1.603 -2.010 -1.213 D 118 116 3 119 3 0 0 95 172 -13.742 -3.776 -0.109 IL 119 119 3 119 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - a - - - ML 120 119 3 122 3 1 1 97 174 -5.524 -0.064 -5.524 0.895 -0.893 -0.879 0.082 D 121 119 3 122 3 0 0 94 171 -13.742 -1.243 -0.793 IL 122 122 3 122 3 1 2 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - U - - - ML 123 122 3 125 3 1 1 95 173 -5.667 -0.058 -5.667 -1.853 -1.494 -2.021 1.642 D 124 122 3 125 3 0 0 93 170 -13.121 -0.367 -2.155 IL 125 125 3 125 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - G - - - ML 126 125 3 128 3 1 1 94 171 -5.826 -0.052 -5.826 -0.508 -2.146 1.478 -1.806 D 127 125 3 128 3 0 0 91 167 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 129 128 3 131 3 1 1 92 169 -5.826 -0.052 -5.826 1.290 -1.658 -0.256 -1.319 D 130 128 3 131 3 0 0 89 166 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 132 131 3 134 3 1 1 91 168 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 133 131 3 134 3 0 0 88 164 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - U - - - ML 135 134 3 137 3 1 1 90 166 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 136 134 3 137 3 0 0 86 162 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - C - - - ML 138 137 3 140 3 1 1 88 164 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 139 137 3 140 3 0 0 85 160 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 141 140 3 143 3 1 1 87 162 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 142 140 3 143 3 0 0 83 159 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - u - - - ML 144 143 3 146 3 1 1 85 161 -5.826 -0.052 -5.826 -0.224 0.078 -0.981 0.661 D 145 143 3 146 3 0 0 82 157 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - c - - - ML 147 146 3 149 3 1 1 84 159 -5.826 -0.052 -5.826 -0.277 0.887 -1.166 -0.184 D 148 146 3 149 3 0 0 80 155 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - a - - - ML 150 149 3 152 3 1 1 82 157 -5.826 -0.052 -5.826 0.947 -1.510 0.347 -1.156 D 151 149 3 152 3 0 0 78 153 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - G - - - ML 153 152 3 155 3 1 1 80 155 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 154 152 3 155 3 0 0 77 151 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 156 155 3 158 3 1 1 79 154 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 157 155 3 158 3 0 0 75 150 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - G - - - ML 159 158 3 161 3 1 1 77 152 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 160 158 3 161 3 0 0 74 148 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - G - - - ML 162 161 3 164 3 1 1 76 150 -5.826 -0.052 -5.826 -0.479 -2.129 1.467 -1.788 D 163 161 3 164 3 0 0 72 146 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - a - - - ML 165 164 3 167 3 1 1 74 148 -5.826 -0.052 -5.826 0.649 0.537 -1.249 -0.834 D 166 164 3 167 3 0 0 70 144 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - C - - - ML 168 167 3 170 3 1 1 72 146 -5.826 -0.052 -5.826 -2.444 1.749 -2.671 -1.745 D 169 167 3 170 3 0 0 69 142 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - U - - - ML 171 170 3 173 3 1 1 71 144 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 172 170 3 173 3 0 0 67 140 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - U - - - ML 174 173 3 176 3 1 1 69 142 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 175 173 3 176 3 0 0 65 138 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - G - - - ML 177 176 3 179 3 1 1 67 140 -5.826 -0.052 -5.826 -2.124 -3.033 1.808 -2.757 D 178 176 3 179 3 0 0 63 135 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - A - - - ML 180 179 3 182 3 1 1 65 138 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 181 179 3 182 3 0 0 61 133 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - A - - - ML 183 182 3 185 3 1 1 64 136 -5.826 -0.052 -5.826 1.206 -0.335 -1.354 -0.975 D 184 182 3 185 3 0 0 59 131 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - A - - - ML 186 185 3 188 3 1 1 62 133 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 187 185 3 188 3 0 0 57 128 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 71 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - U - - - ML 189 188 3 191 3 1 1 59 131 -5.826 -0.052 -5.826 -2.177 -1.761 -2.356 1.717 D 190 188 3 191 3 0 0 55 125 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - A - - - ML 192 191 3 194 3 1 1 57 128 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 193 191 3 194 3 0 0 52 122 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - c - - - ML 195 194 3 197 3 1 1 55 125 -5.826 -0.052 -5.826 -1.412 0.757 -1.600 0.682 D 196 194 3 197 3 0 0 49 118 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 198 197 3 200 3 1 1 52 122 -5.826 -0.052 -5.826 1.819 -2.839 -2.560 -2.615 D 199 197 3 200 3 0 0 44 113 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - u - - - ML 201 200 3 203 3 1 1 48 117 -5.826 -0.052 -5.826 -1.392 0.630 -1.579 0.797 D 202 200 3 203 3 0 0 32 101 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - g - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 0.439 -1.623 0.929 -1.266 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ZNRD1-AS1_1 ACC RF02218 DESC ZNRD1 antisense RNA 1 conserved region 1 LENG 68 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Mon Jul 8 14:40:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02218/CM NSEQ 8 EFFN 3.472656 CKSUM 2060624896 STATS LOCAL MSV -8.8608 0.71877 STATS LOCAL VITERBI -8.8234 0.71877 STATS LOCAL FORWARD -3.6282 0.71877 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36615 1.51354 1.58558 1.13958 1.38629 1.38629 1.38629 1.38629 0.02093 5.17939 4.19422 0.39730 1.11515 0.00000 * 1 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 2 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 3 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 4 1.56612 1.56924 2.09215 0.77758 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 5 1.71814 2.86215 0.36952 2.62568 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 6 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 7 2.42560 1.56078 2.55792 0.47138 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 8 2.59214 0.44855 2.73880 1.50536 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 9 2.35006 1.17936 2.47902 0.66682 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 10 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 11 1.64900 0.49180 2.53889 2.14319 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 12 0.55381 2.25055 2.28587 1.52225 - A - - : 1.38629 1.38629 1.38629 1.38629 0.14456 4.03824 2.14584 1.46634 0.26236 1.09861 0.40547 13 2.39346 0.54447 2.52854 1.39127 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03993 3.93361 3.93361 1.46634 0.26236 0.26345 1.46271 14 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 15 2.23554 2.53554 0.45249 1.72707 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 16 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 17 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 18 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 19 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 20 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 21 2.35473 1.22513 2.48386 0.63877 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 22 2.44763 0.45382 1.80247 2.17673 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 23 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 24 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 25 1.60468 2.09139 0.93467 1.26296 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 26 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 27 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 28 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 29 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 30 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 31 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 32 2.35103 0.94987 2.48049 0.83416 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 33 0.81250 1.59301 2.05559 1.49200 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 34 1.74143 2.87543 0.36103 2.63969 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 35 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 36 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 37 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 38 1.00759 1.64501 2.01305 1.17665 - a - - : 1.38629 1.38629 1.38629 1.38629 0.25341 4.03824 1.57879 1.46634 0.26236 1.09861 0.40547 39 2.64671 0.27546 2.77932 2.22734 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04442 3.82925 3.82925 1.46634 0.26236 2.61728 0.07580 40 0.76613 2.00507 1.99578 1.32942 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04442 3.82925 3.82925 1.46634 0.26236 0.86123 0.54929 41 2.67050 2.42156 2.78697 0.24796 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04015 3.92824 3.92824 1.46634 0.26236 0.25424 1.49390 42 1.73871 2.87388 0.36201 2.63806 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 43 0.49221 2.53535 1.56404 2.30056 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 44 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 45 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 46 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 47 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 48 1.54172 1.33210 2.06594 0.92794 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 49 1.57860 0.77149 2.19467 1.51406 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 50 0.72967 2.43302 1.14577 2.18762 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 51 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 52 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 53 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 54 1.71814 2.86215 0.36952 2.62568 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 55 0.93663 1.01436 2.25213 1.96438 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 56 3.08062 0.17410 3.23770 2.59564 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 57 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 58 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 59 2.85857 3.48892 0.13339 3.29704 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 60 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 61 0.55021 1.61851 2.32466 2.06230 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 62 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 63 2.89495 2.60676 3.01950 0.19589 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 64 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 65 2.36469 0.86163 2.49513 0.91363 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 66 0.12573 3.35397 3.16106 3.19856 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 67 2.35103 0.94987 2.48049 0.83416 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 68 1.08196 2.51162 0.74238 2.26381 - g - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //