INFERNAL1/a [1.1.5 | Sep 2023] NAME TTC28-AS1_4 ACC RF02201 DESC TTC28 antisense RNA 1 conserved region 4 STATES 343 NODES 115 CLEN 113 W 206 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 04:35:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02201/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 18 EFFN 3.062988 CKSUM 88374950 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.40 NC 44.90 EFP7GF -6.9663 0.71815 ECMLC 0.68749 -10.64733 -2.16701 1600000 408487 0.002938 ECMGC 0.36814 -17.96468 -7.17700 1600000 21223 0.018847 ECMLI 0.45359 -11.53655 0.27080 1600000 254166 0.004721 ECMGI 0.44945 -6.76438 1.97595 1600000 20330 0.019675 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 206 295 -7.351 -7.558 -0.040 -5.972 IL 1 1 2 1 4 20 58 208 297 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 20 57 207 296 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 20 57 206 295 -5.718 -0.056 -5.718 -0.286 -0.289 -0.966 0.887 D 4 2 3 5 3 15 52 203 292 -11.551 -1.585 -0.585 IL 5 5 3 5 3 21 59 212 302 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 19 56 205 294 -5.718 -0.056 -5.718 -0.755 -2.133 1.533 -1.803 D 7 5 3 8 3 14 52 202 290 -11.551 -1.585 -0.585 IL 8 8 3 8 3 20 58 210 300 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 18 55 203 292 -5.718 -0.056 -5.718 -1.001 -0.647 -0.733 1.176 D 10 8 3 11 3 14 51 200 289 -11.551 -1.585 -0.585 IL 11 11 3 11 3 20 57 209 299 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 18 54 202 291 -5.718 -0.056 -5.718 -0.606 -1.012 1.170 -0.745 D 13 11 3 14 3 13 50 199 288 -11.551 -1.585 -0.585 IL 14 14 3 14 3 19 56 208 298 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 17 54 201 290 -5.718 -0.056 -5.718 -1.061 1.022 -0.775 -0.143 D 16 14 3 17 3 13 49 198 286 -11.551 -1.585 -0.585 IL 17 17 3 17 3 18 56 207 296 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - u - - - ML 18 17 3 20 3 16 53 200 288 -5.718 -0.115 -4.114 0.032 -0.376 -0.044 0.308 D 19 17 3 20 3 12 48 196 285 -11.551 -1.585 -0.585 IL 20 20 3 20 3 19 55 206 295 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - c - - - ML 21 20 3 23 3 17 53 199 287 -5.661 -0.058 -5.661 -0.550 0.680 -1.053 0.302 D 22 20 3 23 3 12 47 194 283 -12.299 -2.333 -0.319 IL 23 23 3 23 3 18 55 204 294 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - g - - - ML 24 23 3 26 3 16 52 197 286 -5.661 -0.058 -5.661 -0.135 -0.794 0.956 -0.805 D 25 23 3 26 3 11 47 193 281 -12.299 -2.333 -0.319 IL 26 26 3 26 3 18 54 203 292 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 27 26 3 29 3 16 51 196 284 -5.661 -0.058 -5.661 -1.334 1.057 -1.521 0.232 D 28 26 3 29 3 11 47 192 280 -12.299 -2.333 -0.319 IL 29 29 3 29 3 17 53 202 291 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 15 50 195 283 -5.661 -0.058 -5.661 -0.471 0.602 -0.321 -0.059 D 31 29 3 32 3 11 46 191 279 -12.299 -2.333 -0.319 IL 32 32 3 32 3 17 52 201 290 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - u - - - ML 33 32 3 35 3 14 49 194 282 -5.661 -0.058 -5.661 -0.443 -0.594 -0.609 0.960 D 34 32 3 35 3 10 46 190 278 -12.299 -2.333 -0.319 IL 35 35 3 35 3 16 51 200 288 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - g - - - ML 36 35 3 38 3 14 49 192 280 -5.661 -0.107 -4.277 -0.135 -0.698 0.914 -0.763 D 37 35 3 38 3 10 45 190 277 -12.299 -2.333 -0.319 IL 38 38 3 38 3 15 51 198 287 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 39 38 3 41 3 13 48 191 279 -5.614 -0.060 -5.614 0.792 -0.562 -0.458 -0.212 D 40 38 3 41 3 10 45 189 277 -12.699 -0.516 -1.733 IL 41 41 3 41 3 15 50 197 286 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 42 41 3 44 3 13 47 190 278 -5.718 -0.056 -5.718 -0.869 0.541 -0.666 0.451 D 43 41 3 44 3 8 43 187 274 -11.551 -1.585 -0.585 IL 44 44 3 44 3 14 49 196 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 45 44 3 47 3 12 46 189 276 -5.718 -0.056 -5.718 -1.525 1.248 -1.724 -0.038 D 46 44 3 47 3 8 42 186 273 -11.551 -1.585 -0.585 IL 47 47 3 47 3 13 48 195 283 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 11 45 187 275 -5.718 -0.056 -5.718 -1.699 1.419 -1.910 -0.413 D 49 47 3 50 3 7 41 184 272 -11.551 -1.585 -0.585 IL 50 50 3 50 3 13 47 193 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - g - - - ML 51 50 3 53 3 11 44 186 274 -5.718 -0.056 -5.718 0.108 -0.714 0.660 -0.451 D 52 50 3 53 3 7 41 183 270 -11.551 -1.585 -0.585 IL 53 53 3 53 3 12 46 192 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - u - - - ML 54 53 3 56 3 10 44 185 272 -5.718 -0.056 -5.718 -0.448 -0.865 -0.091 0.831 D 55 53 3 56 3 6 40 182 269 -11.551 -1.585 -0.585 IL 56 56 3 56 3 11 45 191 279 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 9 43 184 271 -5.718 -0.056 -5.718 -1.607 1.338 -1.812 -0.218 D 58 56 3 59 3 6 39 181 268 -11.551 -1.585 -0.585 IL 59 59 3 59 3 11 44 190 278 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 9 42 182 269 -5.718 -0.056 -5.718 -1.305 -1.216 -0.866 1.387 D 61 59 3 62 3 5 38 180 266 -11.551 -1.585 -0.585 IL 62 62 3 62 3 10 44 188 276 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 63 62 3 65 3 8 41 181 268 -5.718 -0.163 -3.507 -1.958 -2.800 1.776 -2.521 D 64 62 3 65 3 5 38 179 265 -11.551 -1.585 -0.585 IL 65 65 3 65 3 10 43 187 275 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - a - - - ML 66 65 3 68 3 8 40 180 267 -5.615 -0.060 -5.615 0.793 0.176 -1.006 -0.645 D 67 65 3 68 3 4 37 178 265 -12.695 -0.518 -1.729 IL 68 68 3 68 3 9 42 186 274 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 69 68 3 71 3 7 40 179 265 -5.718 -0.056 -5.718 -1.531 1.256 -1.731 -0.052 D 70 68 3 71 3 3 35 176 262 -11.551 -1.585 -0.585 IL 71 71 3 71 3 9 41 185 272 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - g - - - ML 72 71 3 74 3 7 39 177 264 -5.718 -0.056 -5.718 -0.195 -0.063 0.299 -0.091 D 73 71 3 74 3 3 34 174 261 -11.551 -1.585 -0.585 IL 74 74 3 74 3 8 41 183 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - u - - - ML 75 74 3 77 3 6 38 176 263 -5.718 -0.056 -5.718 -0.796 0.062 -0.514 0.749 D 76 74 3 77 3 2 33 173 259 -11.551 -1.585 -0.585 IL 77 77 3 77 3 8 40 182 270 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 6 37 175 261 -5.718 -0.056 -5.718 -0.237 -0.889 1.058 -0.920 D 79 77 3 80 3 2 33 172 258 -11.551 -1.585 -0.585 IL 80 80 3 80 3 7 39 181 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 5 36 174 260 -5.718 -0.056 -5.718 -2.220 1.705 -2.435 -1.553 D 82 80 3 83 3 1 32 171 257 -11.551 -1.585 -0.585 IL 83 83 3 83 3 7 38 180 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 5 36 172 258 -5.718 -0.056 -5.718 -1.369 -0.289 -1.554 1.295 D 85 83 3 86 3 1 31 169 255 -11.551 -1.585 -0.585 IL 86 86 3 86 3 6 37 178 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 4 35 171 257 -5.718 -0.056 -5.718 -1.333 -1.388 1.534 -1.618 D 88 86 3 89 3 1 30 168 254 -11.551 -1.585 -0.585 IL 89 89 3 89 3 6 37 177 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - C - - - ML 90 89 3 92 3 4 34 170 256 -5.718 -0.056 -5.718 -2.220 1.705 -2.435 -1.553 D 91 89 3 92 3 0 30 167 252 -11.551 -1.585 -0.585 IL 92 92 3 92 3 5 36 176 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - u - - - ML 93 92 3 95 3 4 33 169 254 -5.718 -0.056 -5.718 -0.624 0.258 -1.075 0.749 D 94 92 3 95 3 0 29 165 251 -11.551 -1.585 -0.585 IL 95 95 3 95 3 5 35 175 261 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - g - - - ML 96 95 3 98 3 3 33 167 253 -5.718 -0.056 -5.718 -0.580 0.115 0.697 -0.673 D 97 95 3 98 3 0 28 164 250 -11.551 -1.585 -0.585 IL 98 98 3 98 3 5 34 173 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - u - - - ML 99 98 3 101 3 3 32 166 252 -5.718 -0.056 -5.718 -0.756 -0.319 -0.267 0.828 D 100 98 3 101 3 0 27 163 248 -11.551 -1.585 -0.585 IL 101 101 3 101 3 4 34 172 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 3 31 165 250 -5.718 -0.056 -5.718 -0.532 -2.007 1.457 -1.668 D 103 101 3 104 3 0 26 162 247 -11.551 -1.585 -0.585 IL 104 104 3 104 3 4 33 171 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - G - - - ML 105 104 3 107 3 2 30 163 249 -5.718 -0.056 -5.718 -1.122 -2.336 1.631 -2.023 D 106 104 3 107 3 0 26 160 245 -11.551 -1.585 -0.585 IL 107 107 3 107 3 3 32 170 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 108 107 3 110 3 2 30 162 247 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 109 107 3 110 3 0 25 159 244 -11.551 -1.585 -0.585 IL 110 110 3 110 3 3 31 168 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 2 29 161 246 -5.718 -0.056 -5.718 -0.719 1.246 -1.471 -0.600 D 112 110 3 113 3 0 24 158 243 -11.551 -1.585 -0.585 IL 113 113 3 113 3 3 31 167 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - a - - - ML 114 113 3 116 3 2 28 160 245 -5.718 -0.056 -5.718 0.560 -0.507 0.184 -0.543 D 115 113 3 116 3 0 23 157 241 -11.551 -1.585 -0.585 IL 116 116 3 116 3 3 30 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - C - - - ML 117 116 3 119 3 1 27 158 243 -5.718 -0.056 -5.718 -1.502 1.220 -1.700 0.013 D 118 116 3 119 3 0 23 155 240 -11.551 -1.585 -0.585 IL 119 119 3 119 3 2 29 165 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - u - - - ML 120 119 3 122 3 1 27 157 242 -5.718 -0.056 -5.718 -0.478 -0.411 -0.403 0.827 D 121 119 3 122 3 0 22 154 238 -11.551 -1.585 -0.585 IL 122 122 3 122 3 2 28 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - u - - - ML 123 122 3 125 3 1 26 156 240 -5.718 -0.056 -5.718 -0.714 -0.516 0.161 0.653 D 124 122 3 125 3 0 21 152 237 -11.551 -1.585 -0.585 IL 125 125 3 125 3 2 28 162 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - G - - - ML 126 125 3 128 3 1 25 155 239 -5.718 -0.097 -4.448 -1.260 -1.122 1.466 -1.473 D 127 125 3 128 3 0 20 151 235 -11.551 -1.585 -0.585 IL 128 128 3 128 3 2 28 161 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - G - - - ML 129 128 3 131 3 1 25 153 238 -5.679 -0.057 -5.679 -0.798 -2.103 1.536 -1.775 D 130 128 3 131 3 0 20 149 233 -12.108 -2.142 -0.371 IL 131 131 3 131 3 1 27 160 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - C - - - ML 132 131 3 134 3 1 25 152 236 -5.679 -0.057 -5.679 -2.138 1.687 -2.349 -1.484 D 133 131 3 134 3 0 19 148 232 -12.108 -2.142 -0.371 IL 134 134 3 134 3 1 26 158 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - U - - - ML 135 134 3 137 3 1 24 151 235 -5.679 -0.057 -5.679 -1.000 -0.437 -0.871 1.147 D 136 134 3 137 3 0 19 147 230 -12.108 -2.142 -0.371 IL 137 137 3 137 3 1 26 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - G - - - ML 138 137 3 140 3 1 24 149 233 -5.679 -0.057 -5.679 -1.897 -2.714 1.763 -2.434 D 139 137 3 140 3 0 18 145 229 -12.108 -2.142 -0.371 IL 140 140 3 140 3 1 25 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 141 140 3 143 3 1 23 148 232 -5.679 -0.057 -5.679 1.085 -0.622 -1.009 -0.451 D 142 140 3 143 3 0 18 144 228 -12.108 -2.142 -0.371 IL 143 143 3 143 3 1 25 155 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - G - - - ML 144 143 3 146 3 1 22 147 230 -5.679 -0.057 -5.679 -0.749 -1.245 1.359 -1.262 D 145 143 3 146 3 0 17 143 226 -12.108 -2.142 -0.371 IL 146 146 3 146 3 1 24 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - G - - - ML 147 146 3 149 3 1 22 146 229 -5.679 -0.057 -5.679 -0.701 -2.048 1.505 -1.716 D 148 146 3 149 3 0 17 142 225 -12.108 -2.142 -0.371 IL 149 149 3 149 3 1 23 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - G - - - ML 150 149 3 152 3 1 21 144 228 -5.679 -0.057 -5.679 -1.203 -1.028 1.428 -1.380 D 151 149 3 152 3 0 17 141 224 -12.108 -2.142 -0.371 IL 152 152 3 152 3 1 23 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 153 152 3 155 3 1 20 143 226 -5.679 -0.057 -5.679 -1.255 -0.035 -1.435 1.160 D 154 152 3 155 3 0 16 139 222 -12.108 -2.142 -0.371 IL 155 155 3 155 3 1 22 149 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - G - - - ML 156 155 3 158 3 1 19 142 225 -5.679 -0.171 -3.441 -0.785 -2.095 1.532 -1.767 D 157 155 3 158 3 0 16 139 221 -12.108 -2.142 -0.371 IL 158 158 3 158 3 1 22 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - G - - - ML 159 158 3 161 3 1 19 140 223 -5.570 -0.062 -5.570 -0.663 -1.878 1.462 -1.547 D 160 158 3 161 3 0 15 138 221 -12.989 -0.786 -1.252 IL 161 161 3 161 3 1 21 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - C - - - ML 162 161 3 164 3 1 18 139 222 -5.679 -0.057 -5.679 -2.138 1.687 -2.349 -1.484 D 163 161 3 164 3 0 14 135 218 -12.108 -2.142 -0.371 IL 164 164 3 164 3 1 20 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - A - - - ML 165 164 3 167 3 1 18 138 220 -5.679 -0.057 -5.679 1.543 -1.867 -1.074 -1.568 D 166 164 3 167 3 0 13 134 217 -12.108 -2.142 -0.371 IL 167 167 3 167 3 1 19 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - G - - - ML 168 167 3 170 3 1 17 136 219 -5.679 -0.135 -3.841 -1.316 -1.895 1.530 -1.177 D 169 167 3 170 3 0 13 133 216 -12.108 -2.142 -0.371 IL 170 170 3 170 3 1 19 143 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - a - - - ML 171 170 3 173 3 1 17 135 218 -2.167 -0.402 -5.604 0.600 -0.493 0.080 -0.480 D 172 170 3 173 3 0 13 133 215 -12.771 -0.967 -1.034 IL 173 173 3 173 3 1 17 135 217 -5.657 -0.029 -13.301 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - g - - - ML 174 173 3 176 3 1 16 134 216 -5.679 -0.057 -5.679 0.327 -1.481 0.947 -1.124 D 175 173 3 176 3 0 12 130 212 -12.108 -2.142 -0.371 IL 176 176 3 176 3 1 17 141 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - g - - - ML 177 176 3 179 3 1 15 133 215 -5.679 -0.143 -3.743 -0.273 -1.153 0.962 -0.368 D 178 176 3 179 3 0 11 129 211 -12.108 -2.142 -0.371 IL 179 179 3 179 3 1 17 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - C - - - ML 180 179 3 182 3 1 15 131 213 -5.597 -0.061 -5.597 -1.350 1.181 -1.538 -0.006 D 181 179 3 182 3 0 11 128 210 -12.821 -2.855 -0.215 IL 182 182 3 182 3 1 16 138 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - a - - - ML 183 182 3 185 3 1 14 130 212 -5.597 -0.061 -5.597 0.805 -1.258 0.378 -0.904 D 184 182 3 185 3 0 11 128 209 -12.821 -0.920 -1.085 IL 185 185 3 185 3 1 15 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - C - - - ML 186 185 3 188 3 1 13 129 210 -5.679 -0.057 -5.679 -1.547 1.318 -1.749 -0.205 D 187 185 3 188 3 0 10 126 207 -12.108 -2.142 -0.371 IL 188 188 3 188 3 1 14 135 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - U - - - ML 189 188 3 191 3 1 12 127 209 -5.679 -0.260 -2.780 -1.875 -1.512 -2.044 1.648 D 190 188 3 191 3 0 9 125 206 -12.108 -2.142 -0.371 IL 191 191 3 191 3 1 14 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - C - - - ML 192 191 3 194 3 1 12 126 208 -5.484 -0.066 -5.484 -0.923 1.368 -1.519 -0.884 D 193 191 3 194 3 0 9 124 205 -13.408 -0.544 -1.671 IL 194 194 3 194 3 1 14 133 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - a - - - ML 195 194 3 197 3 1 11 125 206 -5.679 -0.057 -5.679 0.486 -0.204 0.012 -0.467 D 196 194 3 197 3 0 7 122 203 -12.108 -0.872 -1.142 IL 197 197 3 197 3 1 13 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - G - - - ML 198 197 3 200 3 1 11 123 205 -5.718 -0.056 -5.718 -0.418 -1.941 1.412 -1.599 D 199 197 3 200 3 0 6 120 201 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 12 130 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - C - - - ML 201 200 3 203 3 1 10 122 203 -5.718 -0.056 -5.718 -2.220 1.705 -2.435 -1.553 D 202 200 3 203 3 0 5 119 200 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 12 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 69 - U - - - ML 204 203 3 206 3 1 9 121 201 -5.718 -0.056 -5.718 -1.954 -1.577 -2.126 1.668 D 205 203 3 206 3 0 5 118 198 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 11 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 70 - A - - - ML 207 206 3 209 3 1 9 119 200 -5.718 -0.056 -5.718 1.776 -2.556 -2.291 -2.322 D 208 206 3 209 3 0 4 116 196 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 10 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 71 - A - - - ML 210 209 3 212 3 1 8 118 198 -5.718 -0.056 -5.718 1.509 -1.836 -0.923 -1.528 D 211 209 3 212 3 0 4 115 195 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 10 125 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 72 - C - - - ML 213 212 3 215 3 1 8 117 197 -5.718 -0.056 -5.718 -1.538 1.407 -0.892 -1.106 D 214 212 3 215 3 0 3 113 193 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 9 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 73 - C - - - ML 216 215 3 218 3 1 7 115 195 -5.718 -0.056 -5.718 -1.227 1.535 -1.980 -1.247 D 217 215 3 218 3 0 3 112 192 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 9 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 74 - C - - - ML 219 218 3 221 3 1 7 114 194 -5.718 -0.056 -5.718 -1.857 1.533 -2.079 -0.754 D 220 218 3 221 3 0 2 111 190 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 8 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 75 - A - - - ML 222 221 3 224 3 1 6 113 192 -5.718 -0.056 -5.718 1.530 -1.873 -0.993 -1.569 D 223 221 3 224 3 0 2 109 189 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 7 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 76 - a - - - ML 225 224 3 227 3 1 6 111 191 -5.718 -0.056 -5.718 0.904 -0.469 -0.436 -0.583 D 226 224 3 227 3 0 1 108 187 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 7 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 77 - A - - - ML 228 227 3 230 3 1 5 110 189 -5.718 -0.056 -5.718 1.776 -2.556 -2.291 -2.322 D 229 227 3 230 3 0 1 107 186 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 6 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 78 - G - - - ML 231 230 3 233 3 1 5 108 188 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 232 230 3 233 3 0 0 105 184 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 6 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 79 - U - - - ML 234 233 3 236 3 1 4 107 186 -5.718 -0.056 -5.718 -1.305 -1.216 -0.866 1.387 D 235 233 3 236 3 0 0 104 182 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 5 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 80 - G - - - ML 237 236 3 239 3 1 4 106 184 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 238 236 3 239 3 0 0 102 181 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 5 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 81 - A - - - ML 240 239 3 242 3 1 3 104 183 -5.718 -0.056 -5.718 1.426 -1.710 -0.676 -1.390 D 241 239 3 242 3 0 0 101 180 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 4 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 82 - C - - - ML 243 242 3 245 3 1 3 103 181 -4.205 -0.110 -5.718 -2.220 1.705 -2.435 -1.553 D 244 242 3 245 3 0 0 100 178 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 3 103 181 -3.403 -0.144 -11.046 0.000 0.000 0.000 0.000 [ MATL 82 ] 84 - A - - - ML 246 245 3 248 3 1 2 102 180 -5.718 -0.056 -5.718 1.776 -2.556 -2.291 -2.322 D 247 245 3 248 3 0 0 99 177 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 3 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 85 - c - - - ML 249 248 3 251 3 1 1 100 179 -5.718 -0.211 -3.092 -0.294 0.759 -1.040 0.008 D 250 248 3 251 3 0 0 98 176 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 3 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 86 - G - - - ML 252 251 3 254 3 1 1 99 177 -5.569 -0.062 -5.569 -0.211 -1.621 1.261 -1.274 D 253 251 3 254 3 0 0 97 175 -12.997 -0.405 -2.031 IL 254 254 3 254 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 87 - U - - - ML 255 254 3 257 3 1 1 98 175 -5.718 -0.056 -5.718 -1.481 -0.616 -1.669 1.420 D 256 254 3 257 3 0 0 94 172 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 2 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 88 - G - - - ML 258 257 3 260 3 1 1 96 174 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 259 257 3 260 3 0 0 93 170 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 2 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 89 - C - - - ML 261 260 3 263 3 1 1 95 172 -5.718 -0.056 -5.718 -1.683 1.406 -1.893 -0.379 D 262 260 3 263 3 0 0 91 168 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 90 - C - - - ML 264 263 3 266 3 1 1 93 170 -5.718 -0.056 -5.718 -2.220 1.705 -2.435 -1.553 D 265 263 3 266 3 0 0 90 167 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 91 - U - - - ML 267 266 3 269 3 1 1 92 169 -5.718 -0.056 -5.718 -1.566 -0.824 -1.755 1.486 D 268 266 3 269 3 0 0 88 165 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 92 - G - - - ML 270 269 3 272 3 1 1 90 167 -5.718 -0.056 -5.718 -0.449 -1.505 1.251 -0.904 D 271 269 3 272 3 0 0 87 163 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 93 - G - - - ML 273 272 3 275 3 1 1 89 165 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 274 272 3 275 3 0 0 85 162 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 94 - C - - - ML 276 275 3 278 3 1 1 87 164 -5.718 -0.097 -4.448 -1.376 1.021 -1.565 0.318 D 277 275 3 278 3 0 0 84 160 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 95 - G - - - ML 279 278 3 281 3 1 1 86 162 -5.679 -0.057 -5.679 -0.290 -1.814 1.343 -1.468 D 280 278 3 281 3 0 0 83 159 -12.108 -0.872 -1.142 IL 281 281 3 281 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 96 - G - - - ML 282 281 3 284 3 1 1 84 160 -5.718 -0.056 -5.718 -1.958 -2.800 1.776 -2.521 D 283 281 3 284 3 0 0 81 156 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 97 - G - - - ML 285 284 3 287 3 1 1 83 158 -5.718 -0.158 -3.559 -0.828 -2.174 1.554 -1.847 D 286 284 3 287 3 0 0 79 154 -11.551 -1.585 -0.585 IL 287 287 3 287 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 96 ] 98 - A - - - ML 288 287 3 290 3 1 1 81 157 -5.620 -0.060 -5.620 1.356 -0.882 -1.299 -1.025 D 289 287 3 290 3 0 0 77 152 -12.658 -1.308 -0.746 IL 290 290 3 290 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 97 ] 99 - c - - - ML 291 290 3 293 3 1 1 80 155 -5.666 -0.058 -5.666 -0.398 0.793 -1.046 0.034 D 292 290 3 293 3 0 0 75 149 -12.245 -2.279 -0.333 IL 293 293 3 293 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 98 ] 100 - a - - - ML 294 293 3 296 3 1 1 78 153 -5.666 -0.058 -5.666 0.514 -0.917 0.293 -0.292 D 295 293 3 296 3 0 0 73 147 -12.245 -2.279 -0.333 IL 296 296 3 296 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 99 ] 101 - u - - - ML 297 296 3 299 3 1 1 76 151 -5.666 -0.058 -5.666 -0.702 -0.385 -0.107 0.758 D 298 296 3 299 3 0 0 72 146 -12.245 -2.279 -0.333 IL 299 299 3 299 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 100 ] 102 - U - - - ML 300 299 3 302 3 1 1 75 149 -5.666 -0.176 -3.395 -0.963 -1.203 -1.536 1.437 D 301 299 3 302 3 0 0 70 144 -12.245 -2.279 -0.333 IL 302 302 3 302 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 101 ] 103 - C - - - ML 303 302 3 305 3 1 1 73 147 -5.553 -0.063 -5.553 -1.877 1.620 -2.072 -1.263 D 304 302 3 305 3 0 0 69 142 -13.084 -1.639 -0.559 IL 305 305 3 305 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 102 ] 104 - A - - - ML 306 305 3 308 3 1 1 71 145 -5.607 -0.060 -5.607 1.263 -1.186 -1.179 -0.475 D 307 305 3 308 3 0 0 67 140 -12.751 -2.785 -0.226 IL 308 308 3 308 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 103 ] 105 - G - - - ML 309 308 3 311 3 1 1 70 143 -5.607 -0.060 -5.607 -0.939 -2.083 1.560 -1.763 D 310 308 3 311 3 0 0 66 139 -12.751 -1.182 -0.839 IL 311 311 3 311 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 104 ] 106 - u - - - ML 312 311 3 314 3 1 1 68 141 -5.666 -0.058 -5.666 -0.673 -0.462 0.265 0.532 D 313 311 3 314 3 0 0 65 137 -12.245 -0.767 -1.279 IL 314 314 3 314 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 105 ] 107 - C - - - ML 315 314 3 317 3 1 1 66 138 -5.718 -0.056 -5.718 -0.939 1.302 -1.042 -0.923 D 316 314 3 317 3 0 0 62 134 -11.551 -1.585 -0.585 IL 317 317 3 317 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 106 ] 108 - U - - - ML 318 317 3 320 3 1 1 64 136 -5.718 -0.056 -5.718 -1.353 -0.232 -1.537 1.271 D 319 317 3 320 3 0 0 60 131 -11.551 -1.585 -0.585 IL 320 320 3 320 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 107 ] 109 - g - - - ML 321 320 3 323 3 1 1 62 134 -5.718 -0.056 -5.718 -0.087 0.000 0.117 -0.038 D 322 320 3 323 3 0 0 57 129 -11.551 -1.585 -0.585 IL 323 323 3 323 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 108 ] 110 - u - - - ML 324 323 3 326 3 1 1 60 131 -5.718 -0.056 -5.718 -0.527 -0.257 -0.637 0.869 D 325 323 3 326 3 0 0 55 126 -11.551 -1.585 -0.585 IL 326 326 3 326 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 109 ] 111 - a - - - ML 327 326 3 329 3 1 1 58 128 -5.718 -0.056 -5.718 0.453 -0.349 0.043 -0.294 D 328 326 3 329 3 0 0 52 123 -11.551 -1.585 -0.585 IL 329 329 3 329 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 110 ] 112 - c - - - ML 330 329 3 332 3 1 1 55 125 -5.718 -0.056 -5.718 -1.348 0.959 -1.535 0.399 D 331 329 3 332 3 0 0 49 119 -11.551 -1.585 -0.585 IL 332 332 3 332 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 111 ] 113 - A - - - ML 333 332 3 335 3 1 1 52 122 -5.718 -0.056 -5.718 1.114 -1.441 -0.003 -1.095 D 334 332 3 335 3 0 0 44 114 -11.551 -1.585 -0.585 IL 335 335 3 335 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 112 ] 114 - a - - - ML 336 335 3 338 3 1 1 48 117 -5.718 -0.056 -5.718 0.733 -1.395 0.557 -1.038 D 337 335 3 338 3 0 0 32 101 -11.551 -1.585 -0.585 IL 338 338 3 338 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 113 ] 115 - a - - - ML 339 338 3 341 2 1 1 1 1 * 0.000 0.874 -0.256 -0.597 -0.580 D 340 338 3 341 2 0 0 0 0 * 0.000 IL 341 341 3 341 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 114 ] - - - - - - E 342 341 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TTC28-AS1_4 ACC RF02201 DESC TTC28 antisense RNA 1 conserved region 4 LENG 113 MAXL 206 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Fri Jul 5 04:35:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02201/CM NSEQ 18 EFFN 3.062988 CKSUM 88374950 STATS LOCAL MSV -9.5544 0.71815 STATS LOCAL VITERBI -10.6280 0.71815 STATS LOCAL FORWARD -3.2888 0.71815 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.53714 1.34033 1.21794 1.48102 1.38629 1.38629 1.38629 1.38629 0.02280 5.09504 4.10986 0.39730 1.11515 0.00000 * 1 1.58430 1.58627 2.05584 0.77168 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 2 1.90986 2.86481 0.32400 2.63592 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 3 2.08021 1.83456 1.89433 0.57094 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 4 1.80613 2.08763 0.57530 1.90252 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 5 2.12159 0.67804 1.92339 1.48529 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 6 1.36443 1.64722 1.41680 1.17312 - u - - : 1.38629 1.38629 1.38629 1.38629 0.07985 3.96328 2.85178 1.46634 0.26236 1.09861 0.40547 7 1.76761 0.91503 2.11639 1.17671 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04034 3.92377 3.92377 1.46634 0.26236 1.61719 0.22121 8 1.48000 1.93648 0.72348 1.94427 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04034 3.92377 3.92377 1.46634 0.26236 1.61719 0.22121 9 2.31098 0.65372 2.44080 1.22540 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04034 3.92377 3.92377 1.46634 0.26236 1.61719 0.22121 10 1.71260 0.96872 1.60887 1.42744 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04034 3.92377 3.92377 1.46634 0.26236 1.61719 0.22121 11 1.69334 1.79784 1.80814 0.72056 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04034 3.92377 3.92377 1.46634 0.26236 1.61719 0.22121 12 1.47981 1.87044 0.75303 1.91510 - g - - : 1.38629 1.38629 1.38629 1.38629 0.07404 3.92377 2.96428 1.46634 0.26236 1.61719 0.22121 13 0.83740 1.77615 1.70372 1.53307 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04169 3.89142 3.89142 1.46634 0.26236 0.35780 1.20136 14 1.98854 1.01100 1.84779 1.07392 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 15 2.44327 0.52099 2.58126 1.41259 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 16 2.56371 0.40242 2.71019 1.67260 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 17 1.31121 1.88122 0.92847 1.69856 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 18 1.69691 1.98600 1.44903 0.81033 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 19 2.50049 0.45914 2.64249 1.53738 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 20 2.29082 2.22911 1.98637 0.42465 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 21 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.11316 3.96328 2.43054 1.46634 0.26236 1.09861 0.40547 22 0.83671 1.26421 2.08343 1.83319 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04167 3.89180 3.89180 1.46634 0.26236 0.35899 1.19859 23 2.44768 0.51578 2.58597 1.42235 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 24 1.52156 1.42999 1.17915 1.44913 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 25 1.93826 1.34333 1.74290 0.86736 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 26 1.55039 2.00239 0.65267 2.02368 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 27 2.92500 0.20466 3.07419 2.46296 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 28 2.33528 1.58659 2.46310 0.48870 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 29 2.31011 2.34830 0.32328 2.50781 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 30 2.92500 0.20466 3.07419 2.46296 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 31 1.81851 1.20762 2.13138 0.86714 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 32 1.78820 1.30692 0.90308 1.85301 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 33 1.91007 1.60775 1.57120 0.81239 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 34 1.75504 2.77726 0.37657 2.54241 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 35 2.16370 3.00572 0.25608 2.78837 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 36 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 37 1.88499 0.52237 2.40625 1.80241 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 38 0.99842 1.73759 1.25868 1.76278 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 39 2.42750 0.54040 2.56440 1.37728 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 40 1.71739 1.67119 1.66563 0.81335 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 41 1.88132 1.74377 1.27456 0.93345 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 42 2.25996 2.16370 0.37003 2.40761 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06703 3.96328 3.08278 1.46634 0.26236 1.09861 0.40547 43 1.93963 2.84370 0.32161 2.61654 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 44 2.86826 0.21724 3.01436 2.41479 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 45 2.07912 1.68911 1.99012 0.59132 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 46 2.70126 3.26772 0.16427 3.07317 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 47 0.63418 1.81717 2.08571 1.69868 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 48 1.90534 2.24908 0.44398 2.26092 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 49 1.87244 2.80598 0.34288 2.57595 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 50 2.22012 2.09877 0.39637 2.34298 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 51 2.25645 1.41030 2.38092 0.58206 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 52 1.93018 2.83841 0.32450 2.61084 - G - - : 1.38629 1.38629 1.38629 1.38629 0.11832 3.93609 2.38531 1.46634 0.26236 1.48435 0.25702 53 1.84601 2.68812 0.37317 2.45835 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04301 3.86079 3.86079 1.46634 0.26236 0.54444 0.86789 54 2.86826 0.21724 3.01436 2.41479 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 55 0.31691 2.68028 2.13062 2.47338 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 56 2.29882 2.69994 0.32595 2.20211 - G - - : 1.38629 1.38629 1.38629 1.38629 0.09357 3.93609 2.66211 1.46634 0.26236 1.48435 0.25702 57 0.97056 1.72780 1.33086 1.71925 - a - - : 1.38629 1.38629 1.38629 1.38629 0.27866 1.50217 3.88450 0.02002 3.92100 0.67010 0.71674 58 1.15952 2.41273 0.72965 2.16529 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 59 1.57555 2.18582 0.71952 1.64126 - g - - : 1.38629 1.38629 1.38629 1.38629 0.09892 3.93609 2.59477 1.46634 0.26236 1.48435 0.25702 60 2.32184 0.56760 2.45254 1.39052 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04221 3.87937 3.87937 1.46634 0.26236 1.97909 0.14873 61 0.82800 2.25847 1.12399 2.01300 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04221 3.87937 3.87937 1.46634 0.26236 0.63778 0.75176 62 2.45891 0.47293 2.59839 1.52829 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 1.48435 0.25702 63 2.68615 2.43447 2.80325 0.24386 - U - - : 1.38629 1.38629 1.38629 1.38629 0.18042 3.93609 1.92721 1.46634 0.26236 1.48435 0.25702 64 2.02617 0.43774 2.43923 1.99923 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04571 3.80138 3.80138 1.46634 0.26236 0.37686 1.15841 65 1.04964 1.52781 1.37790 1.71026 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 0.60385 0.79121 66 1.67580 2.73188 0.40767 2.49441 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 67 2.92500 0.20466 3.07419 2.46296 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 68 2.74087 2.47963 2.86010 0.23011 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 69 0.15498 3.15828 2.97414 2.99611 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 70 0.34039 2.65906 2.02624 2.44572 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 71 2.45210 0.41101 2.00446 2.15266 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 72 2.23666 0.32236 2.75842 2.25043 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 73 2.67338 0.32361 2.82705 1.90877 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 74 0.32597 2.68442 2.07441 2.47361 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 75 0.75998 1.71155 1.68837 1.79025 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 76 0.15498 3.15828 2.97414 2.99611 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 77 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 78 2.29082 2.22911 1.98637 0.42465 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 79 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 80 0.39796 2.57154 1.85476 2.34962 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 81 2.92500 0.20466 3.07419 2.46296 - C - - : 1.38629 1.38629 1.38629 1.38629 0.07605 2.91459 3.96328 0.09939 2.35798 1.09861 0.40547 82 0.15498 3.15828 2.97414 2.99611 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 83 1.58995 0.86032 2.10689 1.38062 - c - - : 1.38629 1.38629 1.38629 1.38629 0.14655 3.96328 2.14288 1.46634 0.26236 1.09861 0.40547 84 1.53225 2.51000 0.51204 2.26907 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04306 3.85979 3.85979 1.46634 0.26236 0.28060 1.40785 85 2.41282 1.81355 2.54303 0.40237 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 86 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 87 2.55273 0.41157 2.69843 1.64917 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 88 2.92500 0.20466 3.07419 2.46296 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 89 2.47192 1.95770 2.60304 0.35618 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 90 1.69731 2.42939 0.51903 2.01265 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 91 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 92 2.34023 0.67832 2.47128 1.16555 - C - - : 1.38629 1.38629 1.38629 1.38629 0.06703 3.96328 3.08278 1.46634 0.26236 1.09861 0.40547 93 1.58757 2.64353 0.45559 2.40361 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03983 3.93609 3.93609 1.46634 0.26236 0.60385 0.79121 94 2.74344 3.32722 0.15526 3.13342 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 95 1.96053 2.89315 0.30882 2.66642 - G - - : 1.38629 1.38629 1.38629 1.38629 0.10962 3.96328 2.46718 1.46634 0.26236 1.09861 0.40547 96 0.44655 1.99738 2.28683 2.09649 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04153 3.89519 3.89519 1.46634 0.26236 0.90680 0.51720 97 1.66184 0.83633 2.11163 1.36307 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92742 3.92742 1.46634 0.26236 1.57978 0.23070 98 1.02976 2.02160 1.18351 1.58835 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92742 3.92742 1.46634 0.26236 1.57978 0.23070 99 1.87267 1.65309 1.46077 0.86092 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92742 3.92742 1.46634 0.26236 1.57978 0.23070 100 2.05380 2.22014 2.45101 0.39015 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12190 3.92742 2.35315 1.46634 0.26236 1.57978 0.23070 101 2.68744 0.26354 2.82271 2.26174 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04353 3.84906 3.84906 1.46634 0.26236 1.13572 0.38742 102 0.51114 2.20824 2.20375 1.71533 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04190 3.88644 3.88644 1.46634 0.26236 1.93048 0.15675 103 2.03747 2.83002 0.30518 2.60855 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04190 3.88644 3.88644 1.46634 0.26236 0.81898 0.58139 104 1.85275 1.70676 1.20277 1.01782 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04019 3.92742 3.92742 1.46634 0.26236 0.53109 0.88664 105 2.03730 0.48381 2.10890 2.02633 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 106 2.32398 1.54742 2.45139 0.50560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 107 1.44634 1.38657 1.30538 1.41236 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 108 1.75177 1.56462 1.82771 0.78398 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 109 1.07249 1.62800 1.35627 1.59012 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 110 2.32035 0.72187 2.45010 1.10978 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 111 0.61379 2.38507 1.38805 2.14507 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 112 0.87836 2.35310 1.00044 2.10582 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 113 0.78074 1.56376 1.80004 1.78801 - a - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //