# STOCKHOLM 1.0
#=GF ID ST7-OT3_2
#=GF AC RF02184
#=GF DE ST7 overlapping transcript 3 conserved region 2
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 100.0
#=GF NC 57.7
#=GF TC 115.7
#=GF SE Predicted; WAR; Eberhardt R
#=GF SS Predicted; WAR;
#=GF TP Gene; lncRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 28.52 -Z 2958934 CM SEQDB
#=GF DR SO; 0001463; lincRNA;
#=GF RN [1]
#=GF RM 12213198
#=GF RT The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a
#=GF RT complex multi-transcript system.
#=GF RA Vincent JB, Petek E, Thevarkunnel S, Kolozsvari D, Cheung J, Patel M,
#=GF RA Scherer SW
#=GF RL Genomics. 2002;80:283-294.
#=GF WK ST7-OT3
#=GF SQ 5

AC130185.3/56080-56217         AUCGCCAGUACCUACUGCAACAUCUUUCCUCCCUACACAGUGACUCCAGCUUGGGAGGGGCAGGGCUAGGCUGAGCCAGCACUCCCUGUGGUGUCUGCCUGCCACGUGCAGCUCUGGAGUUAGCCGUGGGGUGUGAGG
AF400044.1/214-350             AUCGCCAGUACCUACUGCAACAUCUUUUCUCCCUACACAGCGACUCCAGCUUGGGAGGGCAGGGCCAGGGUUGUCACAGCUUCCCCUGUGGUGUCUGCCUGCCAAGCACAGCUCUGGAGUUAGCCCUGGG-UGUGAGA
BL000001.1/115854638-115854774 AUCGCCAGUACCUACUGCAACAUCUUUUCUCCCUACACAGCGACUCCAGCUUGGGAGGGCAGGGCCAGGGUUGUCACAGCUUCCCCUGUGGUGUCUGCCUGCCAAGCACAGCUCUGGAGUUAGCCCUGGG-UGUGAGG
AC159212.3/135378-135241       AUCGCCAGUACCUACUGCAACAUCUUUCCUCCCUACACAGCGACUCCAGCUUGGGAGGGCAGGGCUAAGGUUGUCACAGCUUUCCCUGUGGUGUCUGCCUGCCAAGUACAGCUCUGGAGUUAGCCGUGGGGUGUGAGG
AAWZ02000034.1/11116-10979     AUCGCCAGUACCAACUGCAACAUCUUUCCUCCCUACACAGCGACUCCAGCUUGGGAGGGCAGGGCUAGGUUUGUCACAGCUUUCCCUGUGGUGUCUGCCUGCCAAGUACAGCUAUGGAGUUAGCCGUGGGUUGUGUGA
#=GC SS_cons                   ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#=GC RF                        AUCGCCAGUACCuACUGCAACAUCUUUcCUCCCUACACAGcGACUCCAGCUUGGGAGGGcaGGGccagGguUGucaCAGCuuuCCCUGUGGUGUCUGCCUGCCAaGuaCAGCUcUGGAGUUAGCCgUGGGgUGUGaGg
//
