INFERNAL1/a [1.1.4 | Dec 2020] NAME PVT1_3 ACC RF02166 DESC Pvt1 oncogene conserved region 3 STATES 289 NODES 97 CLEN 95 W 174 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:50:50 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 25 EFFN 5.911255 CKSUM 391300754 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 46.00 NC 39.00 EFP7GF -8.6264 0.71834 ECMLC 0.73205 -10.27419 -1.59188 1600000 691033 0.001737 ECMGC 0.38948 -18.70957 -7.86316 1600000 27334 0.014634 ECMLI 0.64656 -9.29503 -0.35703 1600000 388106 0.003092 ECMGI 0.45176 -10.64417 -1.39310 1600000 26126 0.015310 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 174 258 -8.039 -8.246 -0.192 -3.086 IL 1 1 2 1 4 13 47 176 260 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 13 46 176 259 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 12 45 175 258 -6.190 -0.040 -6.190 -0.901 1.006 -0.862 -0.143 D 4 2 3 5 3 9 43 172 256 -13.438 -0.948 -1.055 IL 5 5 3 5 3 13 47 181 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 11 44 173 257 -6.281 -0.393 -2.147 -1.727 1.302 -1.216 -0.317 D 7 5 3 8 3 8 42 171 254 -12.631 -2.665 -0.248 IL 8 8 3 8 3 13 47 180 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 11 44 172 256 -5.936 -0.048 -5.936 -0.204 0.705 -0.741 -0.146 D 10 8 3 11 3 8 41 171 254 -14.483 -0.242 -2.696 IL 11 11 3 11 3 12 46 179 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 11 44 171 254 -6.314 -0.071 -4.825 -0.793 -0.782 -1.706 1.342 D 13 11 3 14 3 6 38 167 250 -12.147 -2.181 -0.360 IL 14 14 3 14 3 13 46 178 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 11 44 170 253 -6.281 -0.038 -6.281 -0.856 1.161 -1.760 -0.127 D 16 14 3 17 3 6 37 165 248 -12.631 -2.665 -0.248 IL 17 17 3 17 3 12 46 177 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 11 44 169 252 -6.281 -0.038 -6.281 0.525 -0.249 0.213 -0.837 D 19 17 3 20 3 6 37 164 247 -12.631 -2.665 -0.248 IL 20 20 3 20 3 12 45 175 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - u - - - ML 21 20 3 23 3 11 43 168 250 -6.281 -0.038 -6.281 0.079 -0.197 -1.232 0.719 D 22 20 3 23 3 5 36 163 245 -12.631 -2.665 -0.248 IL 23 23 3 23 3 12 45 174 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 11 43 166 249 -6.281 -0.038 -6.281 -0.864 -1.169 1.436 -1.735 D 25 23 3 26 3 5 36 162 244 -12.631 -2.665 -0.248 IL 26 26 3 26 3 12 44 173 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 10 42 165 248 -6.281 -0.038 -6.281 1.127 -0.786 -0.454 -0.982 D 28 26 3 29 3 5 36 160 243 -12.631 -2.665 -0.248 IL 29 29 3 29 3 11 44 172 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 10 42 164 246 -6.281 -0.038 -6.281 -0.452 -0.315 -0.155 0.648 D 31 29 3 32 3 5 35 159 242 -12.631 -2.665 -0.248 IL 32 32 3 32 3 11 43 171 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 10 41 163 245 -4.368 -0.091 -6.281 -0.509 -2.167 1.428 -1.382 D 34 32 3 35 3 5 35 158 240 -12.631 -2.665 -0.248 IL 35 35 3 35 3 10 41 163 245 -3.919 -0.099 -11.563 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 36 35 3 38 3 9 40 162 244 -6.281 -0.038 -6.281 0.201 -2.439 1.281 -2.088 D 37 35 3 38 3 4 35 157 239 -12.631 -2.665 -0.248 IL 38 38 3 38 3 11 42 168 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - C - - - ML 39 38 3 41 3 9 39 161 243 -6.281 -0.038 -6.281 -2.676 1.622 -2.942 -0.654 D 40 38 3 41 3 4 34 156 238 -12.631 -2.665 -0.248 IL 41 41 3 41 3 10 41 167 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 42 41 3 44 3 9 39 159 241 -6.281 -0.038 -6.281 -0.759 -0.236 -1.536 1.147 D 43 41 3 44 3 4 34 155 237 -12.631 -2.665 -0.248 IL 44 44 3 44 3 10 40 166 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - G - - - ML 45 44 3 47 3 8 38 158 240 -6.281 -0.038 -6.281 -0.523 -2.127 1.416 -1.297 D 46 44 3 47 3 4 34 154 236 -12.631 -2.665 -0.248 IL 47 47 3 47 3 9 39 165 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 48 47 3 50 3 7 37 157 239 -6.281 -0.038 -6.281 -0.718 -0.341 -1.533 1.174 D 49 47 3 50 3 4 34 154 236 -12.631 -2.665 -0.248 IL 50 50 3 50 3 8 38 164 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - G - - - ML 51 50 3 53 3 6 36 156 237 -6.281 -0.038 -6.281 -0.373 -1.303 1.254 -1.190 D 52 50 3 53 3 4 33 153 235 -12.631 -1.323 -0.736 IL 53 53 3 53 3 7 37 162 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - C - - - ML 54 53 3 56 3 5 35 154 236 -6.309 -0.171 -3.331 -2.120 1.515 -1.519 -0.828 D 55 53 3 56 3 3 33 153 234 -12.231 -0.776 -1.266 IL 56 56 3 56 3 7 37 161 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - C - - - ML 57 56 3 59 3 5 34 153 235 -6.214 -0.039 -6.214 -2.767 1.714 -3.047 -1.149 D 58 56 3 59 3 2 31 152 233 -13.270 -0.326 -2.305 IL 59 59 3 59 3 6 36 160 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 60 59 3 62 3 4 33 152 234 -6.342 -0.036 -6.342 -2.566 -1.044 -2.807 1.679 D 61 59 3 62 3 1 29 149 230 -11.551 -1.585 -0.585 IL 62 62 3 62 3 5 35 159 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - G - - - ML 63 62 3 65 3 4 33 151 232 -6.342 -0.101 -4.185 -1.520 -3.368 1.780 -3.059 D 64 62 3 65 3 0 28 148 229 -11.551 -1.585 -0.585 IL 65 65 3 65 3 5 35 158 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 66 65 3 68 3 4 33 150 231 -6.279 -0.089 -4.405 -2.076 0.169 -2.287 1.283 D 67 65 3 68 3 0 27 146 227 -12.657 -2.692 -0.243 IL 68 68 3 68 3 5 35 157 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - C - - - ML 69 68 3 71 3 4 33 149 230 -6.229 -0.039 -6.229 -1.577 1.718 -2.936 -2.031 D 70 68 3 71 3 0 27 146 227 -13.156 -1.033 -0.968 IL 71 71 3 71 3 5 34 155 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 72 71 3 74 3 4 32 147 228 -6.294 -0.037 -6.294 1.058 -0.898 -0.677 -0.405 D 73 71 3 74 3 0 26 143 224 -12.468 -2.503 -0.280 IL 74 74 3 74 3 5 34 154 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - G - - - ML 75 74 3 77 3 4 31 146 227 -6.294 -0.037 -6.294 -1.047 -1.632 1.506 -1.505 D 76 74 3 77 3 0 26 142 222 -12.468 -2.503 -0.280 IL 77 77 3 77 3 5 33 153 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 3 31 145 226 -6.294 -0.037 -6.294 -2.061 0.559 -2.270 1.056 D 79 77 3 80 3 0 25 141 221 -12.468 -2.503 -0.280 IL 80 80 3 80 3 4 32 152 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 81 80 3 83 3 3 30 144 224 -6.294 -0.037 -6.294 -0.794 -0.434 -1.601 1.235 D 82 80 3 83 3 0 25 140 220 -12.468 -2.503 -0.280 IL 83 83 3 83 3 4 31 150 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - G - - - ML 84 83 3 86 3 3 29 142 223 -6.294 -0.037 -6.294 -0.506 -1.353 1.272 -1.030 D 85 83 3 86 3 0 24 139 219 -12.468 -2.503 -0.280 IL 86 86 3 86 3 4 31 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 87 86 3 89 3 3 28 141 222 -6.294 -0.037 -6.294 -2.571 1.544 -2.825 -0.368 D 88 86 3 89 3 0 24 138 219 -12.468 -2.503 -0.280 IL 89 89 3 89 3 4 30 148 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - a - - - ML 90 89 3 92 3 2 27 140 220 -6.294 -0.037 -6.294 0.838 -0.302 -0.421 -0.610 D 91 89 3 92 3 0 24 138 218 -12.468 -0.628 -1.503 IL 92 92 3 92 3 3 29 147 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - U - - - ML 93 92 3 95 3 2 27 139 219 -6.342 -0.036 -6.342 -1.012 -0.022 -1.687 1.143 D 94 92 3 95 3 0 22 136 216 -11.551 -1.585 -0.585 IL 95 95 3 95 3 3 28 146 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 96 95 3 98 3 2 26 137 218 -6.342 -0.036 -6.342 -1.141 -3.190 1.722 -2.868 D 97 95 3 98 3 0 21 134 214 -11.551 -1.585 -0.585 IL 98 98 3 98 3 2 27 144 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - G - - - ML 99 98 3 101 3 1 25 136 216 -6.342 -0.036 -6.342 -0.961 -1.454 1.518 -1.964 D 100 98 3 101 3 0 21 133 213 -11.551 -1.585 -0.585 IL 101 101 3 101 3 2 26 143 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 102 101 3 104 3 1 24 135 215 -6.342 -0.036 -6.342 1.662 -2.836 -0.938 -2.529 D 103 101 3 104 3 0 20 132 212 -11.551 -1.585 -0.585 IL 104 104 3 104 3 2 26 142 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - G - - - ML 105 104 3 107 3 1 23 134 213 -6.342 -0.090 -4.368 -0.702 -1.452 1.381 -1.270 D 106 104 3 107 3 0 19 131 211 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 25 141 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - C - - - ML 108 107 3 110 3 1 23 132 212 -3.445 -0.159 -6.289 -1.846 1.654 -2.773 -1.226 D 109 107 3 110 3 0 19 130 210 -12.534 -0.594 -1.568 IL 110 110 3 110 3 2 23 133 213 -1.650 -0.554 -13.161 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - u - - - ML 111 110 3 113 3 1 22 131 211 -6.342 -0.036 -6.342 -0.688 -0.384 -0.451 0.912 D 112 110 3 113 3 0 17 128 208 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 23 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - U - - - ML 114 113 3 116 3 1 21 130 210 -6.342 -0.036 -6.342 -0.706 -0.267 -0.912 1.017 D 115 113 3 116 3 0 16 127 206 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 22 137 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - c - - - ML 117 116 3 119 3 1 20 129 208 -6.342 -0.036 -6.342 -1.030 0.980 -1.111 0.105 D 118 116 3 119 3 0 16 126 205 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 22 136 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - g - - - ML 120 119 3 122 3 1 19 127 207 -6.342 -0.036 -6.342 0.310 -0.708 0.412 -0.290 D 121 119 3 122 3 0 15 124 204 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 21 135 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - U - - - ML 123 122 3 125 3 1 18 126 206 -6.342 -0.036 -6.342 -1.578 0.163 -1.370 1.110 D 124 122 3 125 3 0 14 123 202 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 20 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 126 125 3 128 3 1 18 125 204 -6.342 -0.036 -6.342 -2.286 -0.254 -2.508 1.475 D 127 125 3 128 3 0 14 122 201 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 19 132 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - C - - - ML 129 128 3 131 3 1 17 124 203 -6.342 -0.036 -6.342 -1.581 1.209 -0.806 -0.353 D 130 128 3 131 3 0 13 121 200 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 18 131 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - A - - - ML 132 131 3 134 3 1 16 122 201 -6.342 -0.036 -6.342 1.273 -1.112 -0.557 -1.180 D 133 131 3 134 3 0 13 120 198 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 17 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - A - - - ML 135 134 3 137 3 1 15 121 200 -6.342 -0.294 -2.540 1.013 -0.981 -0.020 -1.030 D 136 134 3 137 3 0 12 119 197 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 18 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - G - - - ML 138 137 3 140 3 1 16 120 199 -6.091 -0.043 -6.091 -0.683 -2.625 1.590 -2.290 D 139 137 3 140 3 0 11 117 196 -13.961 -1.261 -0.780 IL 140 140 3 140 3 1 17 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - G - - - ML 141 140 3 143 3 1 15 119 197 -6.206 -0.040 -6.206 -0.577 -1.717 1.243 -0.603 D 142 140 3 143 3 0 11 116 194 -13.330 -1.540 -0.608 IL 143 143 3 143 3 1 16 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - a - - - ML 144 143 3 146 3 1 14 118 196 -6.255 -0.038 -6.255 0.995 -0.610 -0.791 -0.369 D 145 143 3 146 3 0 10 115 193 -12.921 -2.955 -0.199 IL 146 146 3 146 3 1 16 125 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - U - - - ML 147 146 3 149 3 1 13 116 195 -6.255 -0.038 -6.255 -2.231 -0.525 -2.453 1.541 D 148 146 3 149 3 0 10 114 192 -12.921 -0.431 -1.955 IL 149 149 3 149 3 1 15 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - U - - - ML 150 149 3 152 3 1 13 115 193 -6.342 -0.036 -6.342 -0.476 -1.795 -2.066 1.462 D 151 149 3 152 3 0 8 112 190 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 14 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - U - - - ML 153 152 3 155 3 1 12 114 192 -6.342 -0.036 -6.342 -2.518 -0.920 -2.756 1.655 D 154 152 3 155 3 0 7 111 188 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 13 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - U - - - ML 156 155 3 158 3 1 11 112 190 -6.342 -0.036 -6.342 -1.579 0.254 -1.382 1.063 D 157 155 3 158 3 0 7 109 187 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 13 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - C - - - ML 159 158 3 161 3 1 10 111 189 -6.342 -0.036 -6.342 -2.773 1.630 -3.044 -0.648 D 160 158 3 161 3 0 6 108 186 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 12 119 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - u - - - ML 162 161 3 164 3 1 10 110 187 -3.740 -0.132 -6.342 -0.852 -0.160 -0.619 0.926 D 163 161 3 164 3 0 5 107 184 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 10 110 187 -4.737 -0.055 -12.381 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - G - - - ML 165 164 3 167 3 1 9 109 186 -6.342 -0.036 -6.342 -1.371 -3.297 1.759 -2.983 D 166 164 3 167 3 0 5 106 183 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 10 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - A - - - ML 168 167 3 170 3 1 8 107 185 -6.342 -0.036 -6.342 1.231 -1.117 -0.432 -1.152 D 169 167 3 170 3 0 4 105 182 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 9 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - G - - - ML 171 170 3 173 3 1 7 106 183 -6.342 -0.036 -6.342 -0.429 -1.569 1.396 -1.792 D 172 170 3 173 3 0 4 103 180 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 8 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - C - - - ML 174 173 3 176 3 1 6 105 182 -6.342 -0.150 -3.531 -2.904 1.700 -3.189 -0.979 D 175 173 3 176 3 0 4 102 179 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 8 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - C - - - ML 177 176 3 179 3 1 6 104 181 -6.231 -0.039 -6.231 -1.579 1.718 -2.940 -2.035 D 178 176 3 179 3 0 3 102 179 -13.139 -0.362 -2.173 IL 179 179 3 179 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - U - - - ML 180 179 3 182 3 1 5 102 179 -6.342 -0.036 -6.342 -1.667 -0.530 -1.341 1.377 D 181 179 3 182 3 0 1 99 176 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 6 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 65 - G - - - ML 183 182 3 185 3 1 4 101 178 -6.342 -0.101 -4.185 -0.974 -1.778 1.237 -0.249 D 184 182 3 185 3 0 1 98 175 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 6 109 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 66 - a - - - ML 186 185 3 188 3 1 4 100 176 -6.279 -0.038 -6.279 0.811 -1.022 0.214 -0.753 D 187 185 3 188 3 0 0 98 174 -12.657 -0.535 -1.692 IL 188 188 3 188 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 67 - U - - - ML 189 188 3 191 3 1 4 98 175 -6.342 -0.036 -6.342 -2.518 -0.920 -2.756 1.655 D 190 188 3 191 3 0 0 95 171 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 5 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 68 - G - - - ML 192 191 3 194 3 1 3 97 173 -6.342 -0.036 -6.342 -0.907 -3.083 1.678 -2.755 D 193 191 3 194 3 0 0 94 170 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 4 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 69 - G - - - ML 195 194 3 197 3 1 3 96 172 -6.342 -0.036 -6.342 -1.278 -2.628 1.643 -1.721 D 196 194 3 197 3 0 0 92 168 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 4 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 70 - A - - - ML 198 197 3 200 3 1 3 94 170 -6.342 -0.036 -6.342 1.814 -3.369 -1.881 -3.109 D 199 197 3 200 3 0 0 91 167 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 4 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 71 - U - - - ML 201 200 3 203 3 1 2 93 169 -6.342 -0.036 -6.342 -1.048 -1.521 -0.920 1.400 D 202 200 3 203 3 0 0 90 165 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 3 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 72 - U - - - ML 204 203 3 206 3 1 2 92 167 -6.342 -0.036 -6.342 -1.647 -0.539 -1.301 1.371 D 205 203 3 206 3 0 0 88 164 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 3 100 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 73 - U - - - ML 207 206 3 209 3 1 2 90 166 -6.342 -0.036 -6.342 -3.253 -2.663 -3.456 1.866 D 208 206 3 209 3 0 0 87 162 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 2 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 74 - A - - - ML 210 209 3 212 3 1 1 89 164 -6.342 -0.036 -6.342 1.465 -2.472 -0.265 -2.138 D 211 209 3 212 3 0 0 85 161 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 2 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 75 - C - - - ML 213 212 3 215 3 1 1 87 163 -6.342 -0.036 -6.342 -2.885 1.690 -3.167 -0.926 D 214 212 3 215 3 0 0 84 159 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 2 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 76 - A - - - ML 216 215 3 218 3 1 1 86 161 -6.342 -0.071 -4.808 1.776 -3.202 -1.574 -2.926 D 217 215 3 218 3 0 0 83 157 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 77 - G - - - ML 219 218 3 221 3 1 1 85 159 -6.308 -0.037 -6.308 -0.795 -2.986 1.650 -2.654 D 220 218 3 221 3 0 0 81 155 -12.258 -2.292 -0.330 IL 221 221 3 221 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 78 - U - - - ML 222 221 3 224 3 1 1 83 158 -6.308 -0.037 -6.308 -0.528 -0.625 -1.006 1.111 D 223 221 3 224 3 0 0 80 154 -12.258 -2.292 -0.330 IL 224 224 3 224 3 1 1 92 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 79 - G - - - ML 225 224 3 227 3 1 1 82 156 -6.308 -0.037 -6.308 -0.849 -1.657 1.523 -1.978 D 226 224 3 227 3 0 0 79 153 -12.258 -0.758 -1.292 IL 227 227 3 227 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 80 - A - - - ML 228 227 3 230 3 1 1 80 155 -6.342 -0.036 -6.342 1.928 -4.164 -3.733 -3.983 D 229 227 3 230 3 0 0 77 151 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 81 - U - - - ML 231 230 3 233 3 1 1 79 153 -6.342 -0.036 -6.342 -1.360 -0.879 -0.508 1.241 D 232 230 3 233 3 0 0 75 149 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 88 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 82 - a - - - ML 234 233 3 236 3 1 1 77 151 -6.342 -0.036 -6.342 0.939 -0.762 -0.032 -0.958 D 235 233 3 236 3 0 0 74 147 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 83 - u - - - ML 237 236 3 239 3 1 1 76 150 -6.342 -0.036 -6.342 -1.261 0.311 -0.744 0.804 D 238 236 3 239 3 0 0 72 146 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 84 - U - - - ML 240 239 3 242 3 1 1 74 148 -6.342 -0.036 -6.342 -1.378 -0.801 -0.618 1.257 D 241 239 3 242 3 0 0 71 144 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 85 - c - - - ML 243 242 3 245 3 1 1 73 146 -6.342 -0.036 -6.342 -0.742 0.621 -0.481 0.198 D 244 242 3 245 3 0 0 69 142 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 86 - a - - - ML 246 245 3 248 3 1 1 71 144 -6.342 -0.036 -6.342 0.557 -1.320 0.436 -0.366 D 247 245 3 248 3 0 0 68 140 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 1 81 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 87 - G - - - ML 249 248 3 251 3 1 1 70 142 -6.342 -0.036 -6.342 -0.656 -2.170 1.437 -1.197 D 250 248 3 251 3 0 0 66 138 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 88 - c - - - ML 252 251 3 254 3 1 1 68 141 -6.342 -0.036 -6.342 -1.700 0.967 -1.506 0.471 D 253 251 3 254 3 0 0 65 137 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 89 - u - - - ML 255 254 3 257 3 1 1 67 139 -6.342 -0.036 -6.342 -1.233 0.347 -0.668 0.743 D 256 254 3 257 3 0 0 63 135 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 90 - g - - - ML 258 257 3 260 3 1 1 65 137 -6.342 -0.036 -6.342 -0.033 -1.021 0.799 -0.339 D 259 257 3 260 3 0 0 61 133 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 91 - C - - - ML 261 260 3 263 3 1 1 63 135 -6.342 -0.084 -4.495 -2.554 1.479 -2.802 -0.153 D 262 260 3 263 3 0 0 60 131 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 92 - C - - - ML 264 263 3 266 3 1 1 61 133 -6.295 -0.037 -6.295 -2.305 1.571 -1.937 -0.821 D 265 263 3 266 3 0 0 59 130 -12.451 -0.638 -1.485 IL 266 266 3 266 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 93 - U - - - ML 267 266 3 269 3 1 1 60 131 -6.342 -0.036 -6.342 -0.671 -0.977 -1.727 1.357 D 268 266 3 269 3 0 0 56 126 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 94 - G - - - ML 270 269 3 272 3 1 1 58 128 -6.342 -0.112 -4.001 -2.889 -4.055 1.900 -3.784 D 271 269 3 272 3 0 0 54 124 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 95 - G - - - ML 273 272 3 275 3 1 1 56 126 -6.268 -0.038 -6.268 -0.843 -1.438 1.354 -0.951 D 274 272 3 275 3 0 0 52 122 -12.787 -0.480 -1.821 IL 275 275 3 275 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 96 - G - - - ML 276 275 3 278 3 1 1 53 123 -6.342 -0.036 -6.342 -2.041 -2.973 1.748 -1.882 D 277 275 3 278 3 0 0 47 117 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 97 - G - - - ML 279 278 3 281 3 1 1 50 120 -6.342 -0.036 -6.342 -1.842 -2.539 1.604 -0.976 D 280 278 3 281 3 0 0 43 112 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 98 - A - - - ML 282 281 3 284 3 1 1 47 116 -6.342 -0.159 -3.443 1.374 -2.375 -0.043 -2.035 D 283 281 3 284 3 0 0 32 101 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 99 - A - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 1.109 -0.976 -0.518 -0.652 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 96 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME PVT1_3 ACC RF02166 DESC Pvt1 oncogene conserved region 3 LENG 95 MAXL 174 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 19:50:50 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 25 EFFN 5.911255 STATS LOCAL MSV -8.8213 0.71834 STATS LOCAL VITERBI -9.8915 0.71834 STATS LOCAL FORWARD -3.7650 0.71834 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55939 1.43241 1.28247 1.29589 1.38629 1.38629 1.38629 1.38629 0.12996 5.57248 2.13649 0.39730 1.11515 0.00000 * 1 2.01094 0.68882 1.98388 1.48529 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02777 4.29071 4.29071 1.46634 0.26236 0.65683 0.73083 2 2.58341 0.48416 2.22931 1.60612 - C - - : 1.38629 1.38629 1.38629 1.38629 0.27259 4.35376 1.48840 1.46634 0.26236 1.84721 0.17159 3 1.52788 0.89757 1.90008 1.48771 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03322 4.11439 4.11439 1.46634 0.26236 0.16767 1.86845 4 1.93584 1.92817 2.56892 0.45624 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04903 4.37674 3.34442 1.46634 0.26236 1.51172 0.24914 5 1.97960 0.58135 2.60596 1.47446 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 6 1.02212 1.55884 1.23843 1.96646 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 7 1.33160 1.52279 2.24047 0.88811 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 8 1.98502 2.19679 0.39100 2.58915 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 9 0.60530 1.93102 1.70073 2.06720 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 10 1.69955 1.60455 1.49385 0.93713 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 11 1.73922 2.88802 0.39644 2.34399 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06323 3.02801 4.35376 0.06840 2.71636 1.84721 0.17159 12 1.24695 3.07660 0.49810 2.83327 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 13 3.24110 0.26210 3.42548 1.83940 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 14 1.91233 1.54996 2.45064 0.59101 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 15 1.74904 2.86077 0.40482 2.28537 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 16 1.88392 1.62260 2.44894 0.57228 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 1.84721 0.17159 17 1.64515 2.28948 0.51728 2.21131 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02605 4.35376 4.35376 1.46634 0.26236 0.91720 0.51022 18 2.85543 0.33629 2.43885 1.96048 - C - - : 1.38629 1.38629 1.38629 1.38629 0.11875 4.37330 2.30901 1.46634 0.26236 0.53787 0.87704 19 3.30443 0.19804 3.49851 2.18301 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02731 4.30721 4.30721 1.46634 0.26236 0.22619 1.59734 20 3.16486 2.10971 3.33170 0.22218 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 21 2.43999 3.72098 0.15241 3.50682 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06967 4.39584 2.90089 1.46634 0.26236 1.09861 0.40547 22 2.82561 1.26910 2.97151 0.49690 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06196 4.35226 3.05324 1.46634 0.26236 1.86549 0.16821 23 2.47937 0.19555 3.42137 2.79437 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02703 4.31732 4.31732 1.46634 0.26236 0.71605 0.67076 24 0.65291 2.00840 1.85532 1.66671 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 25 2.11237 2.51737 0.34208 2.42942 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 26 2.81500 0.99881 2.95985 0.65402 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 27 1.93678 1.68694 2.49628 0.53042 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 28 1.73725 2.32443 0.50468 2.09996 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 29 3.16823 0.31623 3.34437 1.64119 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 1.73443 0.19419 30 0.80570 1.59585 1.67818 1.80926 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02583 4.36242 4.36242 1.46634 0.26236 0.43541 1.04128 31 2.08744 1.40178 2.55577 0.59383 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 32 2.17693 3.59749 0.19240 3.37438 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 33 2.05262 2.39385 0.33375 2.74740 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 34 0.23418 3.35240 2.03673 3.13900 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 35 1.87304 2.39303 0.42877 2.26641 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06269 4.39584 3.02746 1.46634 0.26236 1.09861 0.40547 36 2.66576 0.23955 3.30812 2.23596 - C - - : 1.38629 1.38629 1.38629 1.38629 0.11049 2.38797 4.35906 0.38387 1.14324 0.41147 1.08670 37 1.86296 1.65272 1.69911 0.75415 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 38 1.87553 1.57143 2.01831 0.68102 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 39 2.10013 0.70735 2.15640 1.31353 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 40 1.17152 1.87698 1.10094 1.58722 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 41 2.47994 1.27309 2.33574 0.61703 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 42 2.97106 1.56213 3.12456 0.36369 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 43 2.48241 0.54853 1.94529 1.63110 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 44 0.50389 2.15736 1.77261 2.20453 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 45 0.68437 2.06610 1.40047 2.10020 - A - - : 1.38629 1.38629 1.38629 1.38629 0.20374 4.39584 1.76030 1.46634 0.26236 1.09861 0.40547 46 1.85996 3.20560 0.28415 2.97332 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02978 4.22188 4.22188 1.46634 0.26236 0.87371 0.54025 47 1.78643 2.57672 0.52446 1.80457 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02747 4.30162 4.30162 1.46634 0.26236 1.06718 0.42156 48 0.69690 1.80890 1.93450 1.64225 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02654 4.33546 4.33546 1.46634 0.26236 2.04801 0.13810 49 2.93253 1.75041 3.08641 0.31832 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02654 4.33546 4.33546 1.46634 0.26236 0.29838 1.35486 50 1.71640 2.63078 2.81800 0.37318 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 51 3.13188 2.02375 3.29663 0.23928 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 52 2.48061 1.21043 2.34417 0.64949 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 53 3.30853 0.25671 3.49612 1.83558 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 54 1.97664 1.49751 1.81537 0.74444 - u - - : 1.38629 1.38629 1.38629 1.38629 0.09122 2.59221 4.39584 0.03823 3.28309 1.09861 0.40547 55 2.33640 3.67166 0.16692 3.45385 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 56 0.53284 2.16057 1.68563 2.18502 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 57 1.68398 2.47406 0.41865 2.62846 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 58 3.39951 0.20785 3.59678 2.06457 - C - - : 1.38629 1.38629 1.38629 1.38629 0.10407 4.39584 2.44749 1.46634 0.26236 1.09861 0.40547 59 2.48049 0.19514 3.42428 2.79673 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02699 4.31876 4.31876 1.46634 0.26236 0.25077 1.50597 60 2.54162 1.75365 2.31550 0.43170 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 61 2.06138 2.61876 0.52865 1.55862 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06967 4.39584 2.90089 1.46634 0.26236 1.09861 0.40547 62 0.82401 2.09502 1.23816 1.90819 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02609 4.35226 4.35226 1.46634 0.26236 0.37054 1.17234 63 3.13188 2.02375 3.29663 0.23928 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 64 2.01481 3.52359 0.22300 3.29565 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 65 2.27229 3.20812 0.24763 2.57905 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 66 0.12901 3.72154 2.69020 3.54158 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 67 2.11248 2.44061 2.02398 0.41578 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 68 2.52758 1.76023 2.28790 0.43593 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 69 3.64130 3.23233 3.78213 0.09262 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 70 0.37095 3.09957 1.57003 2.86802 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 71 3.38569 0.21476 3.58152 2.02815 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 72 0.15555 3.60558 2.47719 3.41415 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04922 4.39584 3.33255 1.46634 0.26236 1.09861 0.40547 73 1.93729 3.45592 0.24255 3.22590 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02557 4.37219 4.37219 1.46634 0.26236 1.58839 0.22847 74 1.75227 1.81948 2.08342 0.61618 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02557 4.37219 4.37219 1.46634 0.26236 1.58839 0.22847 75 1.97488 2.53492 0.33059 2.75745 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02557 4.37219 4.37219 1.46634 0.26236 0.52511 0.89525 76 0.04978 4.27253 3.97362 4.14696 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 77 2.32913 1.99590 1.73849 0.52604 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 78 0.73532 1.91466 1.40835 2.05021 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 79 2.26028 1.17083 1.90224 0.82934 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 80 2.34179 1.94116 1.81453 0.51518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 81 1.90032 0.95580 1.71943 1.24894 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 82 1.00048 2.30144 1.08395 1.64029 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 83 1.84082 2.89065 0.39051 2.21584 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 84 2.56468 0.71636 2.42998 1.05991 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 85 2.24126 1.14596 1.84965 0.87116 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 86 1.40927 2.09390 0.83266 1.62160 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 87 3.15667 0.36144 3.32862 1.49202 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05834 4.39584 3.11588 1.46634 0.26236 1.09861 0.40547 88 2.98372 0.29766 2.72871 1.95517 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02580 4.36330 4.36330 1.46634 0.26236 0.44218 1.02899 89 1.85116 2.06380 2.58364 0.44554 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 90 3.38867 4.19681 0.06929 4.00905 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07773 4.39584 2.77326 1.46634 0.26236 1.09861 0.40547 91 1.97035 2.38285 0.44785 2.04559 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02630 4.34441 4.34441 1.46634 0.26236 0.33274 1.26216 92 2.80100 3.44681 0.17485 2.69083 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 93 2.66293 3.14622 0.27422 2.06299 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02497 4.39584 4.39584 1.46634 0.26236 1.09861 0.40547 94 0.43357 3.03248 1.41639 2.79650 - A - - : 1.38629 1.38629 1.38629 1.38629 0.11010 4.39584 2.38677 1.46634 0.26236 1.09861 0.40547 95 0.61745 2.06295 1.74567 1.83837 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //