INFERNAL1/a [1.1.5 | Sep 2023] NAME PVT1_3 ACC RF02166 DESC Pvt1 oncogene conserved region 3 STATES 289 NODES 97 CLEN 95 W 174 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 01:35:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02166/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 25 EFFN 5.947876 CKSUM 391300754 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 46.10 NC 44.30 EFP7GF -8.6148 0.71835 ECMLC 0.72888 -10.31908 -1.59803 1600000 691547 0.001735 ECMGC 0.39630 -18.47766 -7.80924 1600000 27430 0.014583 ECMLI 0.64675 -9.29604 -0.36107 1600000 387990 0.003093 ECMGI 0.43677 -11.06379 -1.49007 1600000 26185 0.015276 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 174 257 -8.046 -8.253 -0.199 -3.035 IL 1 1 2 1 4 13 46 176 260 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 13 46 176 259 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 12 45 174 258 -6.190 -0.040 -6.190 -0.884 0.992 -0.871 -0.116 D 4 2 3 5 3 9 42 172 255 -13.484 -0.942 -1.061 IL 5 5 3 5 3 13 47 181 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 11 44 173 256 -6.285 -0.396 -2.139 -1.698 1.281 -1.179 -0.285 D 7 5 3 8 3 8 41 171 254 -12.664 -2.699 -0.242 IL 8 8 3 8 3 13 47 180 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 11 44 172 255 -5.937 -0.048 -5.937 -0.180 0.686 -0.725 -0.147 D 10 8 3 11 3 8 41 171 254 -14.502 -0.244 -2.687 IL 11 11 3 11 3 12 46 179 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 11 44 171 254 -6.320 -0.072 -4.790 -0.763 -0.760 -1.688 1.328 D 13 11 3 14 3 6 38 167 249 -12.169 -2.203 -0.354 IL 14 14 3 14 3 13 46 178 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 11 44 170 253 -6.285 -0.037 -6.285 -0.839 1.181 -1.775 -0.181 D 16 14 3 17 3 6 37 165 248 -12.664 -2.699 -0.242 IL 17 17 3 17 3 12 46 176 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 11 44 169 251 -6.285 -0.037 -6.285 0.526 -0.236 0.204 -0.837 D 19 17 3 20 3 6 37 164 246 -12.664 -2.699 -0.242 IL 20 20 3 20 3 12 45 175 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - u - - - ML 21 20 3 23 3 11 43 167 250 -6.285 -0.037 -6.285 0.111 -0.203 -1.231 0.701 D 22 20 3 23 3 5 36 163 245 -12.664 -2.699 -0.242 IL 23 23 3 23 3 12 45 174 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 11 43 166 249 -6.285 -0.037 -6.285 -0.869 -1.134 1.430 -1.725 D 25 23 3 26 3 5 36 161 244 -12.664 -2.699 -0.242 IL 26 26 3 26 3 12 44 173 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 10 42 165 248 -6.285 -0.037 -6.285 1.109 -0.765 -0.426 -0.972 D 28 26 3 29 3 5 36 160 243 -12.664 -2.699 -0.242 IL 29 29 3 29 3 11 44 172 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 10 42 164 246 -6.285 -0.037 -6.285 -0.437 -0.308 -0.176 0.649 D 31 29 3 32 3 5 35 159 241 -12.664 -2.699 -0.242 IL 32 32 3 32 3 11 43 170 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 10 41 163 245 -4.560 -0.082 -6.285 -0.499 -2.153 1.421 -1.356 D 34 32 3 35 3 5 35 158 240 -12.664 -2.699 -0.242 IL 35 35 3 35 3 11 41 163 245 -3.682 -0.118 -11.326 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 36 35 3 38 3 9 40 162 244 -6.285 -0.037 -6.285 0.164 -2.465 1.303 -2.115 D 37 35 3 38 3 4 35 157 239 -12.664 -2.699 -0.242 IL 38 38 3 38 3 11 42 168 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - C - - - ML 39 38 3 41 3 9 39 160 243 -6.285 -0.037 -6.285 -2.700 1.633 -2.969 -0.696 D 40 38 3 41 3 4 34 156 238 -12.664 -2.699 -0.242 IL 41 41 3 41 3 10 41 167 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 42 41 3 44 3 9 39 159 241 -6.285 -0.037 -6.285 -0.732 -0.207 -1.520 1.126 D 43 41 3 44 3 4 34 155 237 -12.664 -2.699 -0.242 IL 44 44 3 44 3 10 40 166 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - G - - - ML 45 44 3 47 3 8 38 158 240 -6.285 -0.037 -6.285 -0.520 -2.143 1.421 -1.325 D 46 44 3 47 3 4 34 154 236 -12.664 -2.699 -0.242 IL 47 47 3 47 3 9 39 165 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 48 47 3 50 3 7 37 157 239 -6.285 -0.037 -6.285 -0.726 -0.313 -1.535 1.167 D 49 47 3 50 3 4 34 154 235 -12.664 -2.699 -0.242 IL 50 50 3 50 3 8 38 163 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - G - - - ML 51 50 3 53 3 6 36 155 237 -6.285 -0.037 -6.285 -0.365 -1.321 1.253 -1.184 D 52 50 3 53 3 4 33 153 235 -12.664 -1.319 -0.740 IL 53 53 3 53 3 7 37 162 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - C - - - ML 54 53 3 56 3 5 35 154 236 -6.315 -0.171 -3.332 -2.138 1.518 -1.561 -0.811 D 55 53 3 56 3 3 33 153 234 -12.255 -0.759 -1.290 IL 56 56 3 56 3 7 37 161 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - C - - - ML 57 56 3 59 3 5 34 153 235 -6.221 -0.039 -6.221 -2.770 1.712 -3.050 -1.129 D 58 56 3 59 3 2 31 151 233 -13.274 -0.325 -2.308 IL 59 59 3 59 3 6 36 160 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 60 59 3 62 3 4 33 152 233 -6.348 -0.036 -6.348 -2.568 -1.021 -2.809 1.676 D 61 59 3 62 3 1 29 149 230 -11.551 -1.585 -0.585 IL 62 62 3 62 3 5 35 159 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - G - - - ML 63 62 3 65 3 4 33 151 232 -6.348 -0.098 -4.233 -1.644 -3.436 1.796 -3.131 D 64 62 3 65 3 0 28 148 229 -11.551 -1.585 -0.585 IL 65 65 3 65 3 5 35 158 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 66 65 3 68 3 4 33 150 231 -6.288 -0.091 -4.368 -2.085 0.205 -2.296 1.268 D 67 65 3 68 3 0 27 146 227 -12.629 -2.663 -0.248 IL 68 68 3 68 3 6 35 156 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - C - - - ML 69 68 3 71 3 4 33 148 230 -6.236 -0.039 -6.236 -1.547 1.715 -2.934 -2.033 D 70 68 3 71 3 0 27 145 226 -13.155 -1.073 -0.930 IL 71 71 3 71 3 5 34 155 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 72 71 3 74 3 4 32 147 228 -6.298 -0.037 -6.298 1.052 -0.888 -0.660 -0.409 D 73 71 3 74 3 0 26 143 224 -12.498 -2.532 -0.274 IL 74 74 3 74 3 5 34 154 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - G - - - ML 75 74 3 77 3 4 31 146 227 -6.298 -0.037 -6.298 -1.037 -1.660 1.507 -1.499 D 76 74 3 77 3 0 26 142 222 -12.498 -2.532 -0.274 IL 77 77 3 77 3 5 33 153 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 3 31 145 226 -6.298 -0.037 -6.298 -2.069 0.562 -2.278 1.056 D 79 77 3 80 3 0 25 141 221 -12.498 -2.532 -0.274 IL 80 80 3 80 3 4 32 152 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 81 80 3 83 3 3 30 143 224 -6.298 -0.037 -6.298 -0.769 -0.430 -1.590 1.226 D 82 80 3 83 3 0 25 140 220 -12.498 -2.532 -0.274 IL 83 83 3 83 3 4 32 150 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - G - - - ML 84 83 3 86 3 3 29 142 223 -6.298 -0.037 -6.298 -0.482 -1.333 1.263 -1.036 D 85 83 3 86 3 0 24 139 219 -12.498 -2.532 -0.274 IL 86 86 3 86 3 4 31 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 87 86 3 89 3 3 28 141 221 -6.298 -0.037 -6.298 -2.575 1.542 -2.829 -0.361 D 88 86 3 89 3 0 24 138 218 -12.498 -2.532 -0.274 IL 89 89 3 89 3 4 30 148 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - a - - - ML 90 89 3 92 3 2 27 140 220 -6.298 -0.037 -6.298 0.839 -0.329 -0.399 -0.605 D 91 89 3 92 3 0 24 138 218 -12.498 -0.612 -1.532 IL 92 92 3 92 3 3 29 147 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - U - - - ML 93 92 3 95 3 2 27 138 219 -6.348 -0.036 -6.348 -0.989 0.009 -1.675 1.122 D 94 92 3 95 3 0 22 136 216 -11.551 -1.585 -0.585 IL 95 95 3 95 3 3 28 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 96 95 3 98 3 2 26 137 217 -6.348 -0.036 -6.348 -1.115 -3.187 1.719 -2.864 D 97 95 3 98 3 0 21 134 214 -11.551 -1.585 -0.585 IL 98 98 3 98 3 2 27 144 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - G - - - ML 99 98 3 101 3 1 25 136 216 -6.348 -0.036 -6.348 -1.043 -1.485 1.541 -2.018 D 100 98 3 101 3 0 21 133 213 -11.551 -1.585 -0.585 IL 101 101 3 101 3 2 26 143 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 102 101 3 104 3 1 24 135 215 -6.348 -0.036 -6.348 1.654 -2.826 -0.899 -2.517 D 103 101 3 104 3 0 20 132 212 -11.551 -1.585 -0.585 IL 104 104 3 104 3 2 26 142 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - G - - - ML 105 104 3 107 3 1 23 133 213 -6.348 -0.087 -4.428 -0.701 -1.481 1.406 -1.408 D 106 104 3 107 3 0 19 131 211 -11.551 -1.585 -0.585 IL 107 107 3 107 3 2 25 141 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - C - - - ML 108 107 3 110 3 1 23 132 212 -3.637 -0.141 -6.298 -1.823 1.650 -2.765 -1.209 D 109 107 3 110 3 0 19 130 210 -12.498 -0.612 -1.533 IL 110 110 3 110 3 2 23 133 212 -1.790 -0.493 -12.887 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - u - - - ML 111 110 3 113 3 1 22 131 211 -6.348 -0.036 -6.348 -0.677 -0.380 -0.449 0.906 D 112 110 3 113 3 0 17 128 208 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 23 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - U - - - ML 114 113 3 116 3 1 21 130 210 -6.348 -0.036 -6.348 -0.722 -0.312 -0.906 1.039 D 115 113 3 116 3 0 16 127 206 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 22 137 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - c - - - ML 117 116 3 119 3 1 20 129 208 -6.348 -0.036 -6.348 -1.065 0.988 -1.110 0.105 D 118 116 3 119 3 0 16 126 205 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 22 136 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - g - - - ML 120 119 3 122 3 1 19 127 207 -6.348 -0.036 -6.348 0.290 -0.692 0.412 -0.272 D 121 119 3 122 3 0 15 124 204 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 21 135 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - U - - - ML 123 122 3 125 3 1 19 126 205 -6.348 -0.036 -6.348 -1.570 0.183 -1.351 1.095 D 124 122 3 125 3 0 14 123 202 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 20 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 126 125 3 128 3 1 18 125 204 -6.348 -0.036 -6.348 -2.294 -0.243 -2.516 1.473 D 127 125 3 128 3 0 14 122 201 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 19 132 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - C - - - ML 129 128 3 131 3 1 17 124 203 -6.348 -0.036 -6.348 -1.558 1.187 -0.772 -0.325 D 130 128 3 131 3 0 13 121 200 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 18 131 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - A - - - ML 132 131 3 134 3 1 16 122 201 -6.348 -0.036 -6.348 1.311 -1.266 -0.544 -1.263 D 133 131 3 134 3 0 13 120 198 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 17 130 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - a - - - ML 135 134 3 137 3 1 15 121 200 -6.348 -0.305 -2.488 0.992 -0.968 0.012 -1.027 D 136 134 3 137 3 0 12 118 197 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 18 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - G - - - ML 138 137 3 140 3 1 16 120 199 -6.086 -0.043 -6.086 -0.646 -2.599 1.579 -2.262 D 139 137 3 140 3 0 11 117 196 -14.013 -1.258 -0.781 IL 140 140 3 140 3 1 17 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - G - - - ML 141 140 3 143 3 1 15 119 197 -6.207 -0.040 -6.207 -0.603 -1.728 1.252 -0.604 D 142 140 3 143 3 0 11 116 194 -13.374 -1.539 -0.609 IL 143 143 3 143 3 1 16 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - a - - - ML 144 143 3 146 3 1 14 118 196 -6.258 -0.038 -6.258 0.985 -0.614 -0.776 -0.353 D 145 143 3 146 3 0 10 115 193 -12.959 -2.994 -0.194 IL 146 146 3 146 3 1 16 125 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - U - - - ML 147 146 3 149 3 1 13 116 194 -6.258 -0.038 -6.258 -2.224 -0.493 -2.446 1.532 D 148 146 3 149 3 0 10 114 192 -12.959 -0.417 -1.994 IL 149 149 3 149 3 1 15 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - U - - - ML 150 149 3 152 3 1 13 115 193 -6.348 -0.036 -6.348 -0.440 -1.792 -2.055 1.451 D 151 149 3 152 3 0 8 112 190 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 14 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - U - - - ML 153 152 3 155 3 1 12 114 192 -6.348 -0.036 -6.348 -2.520 -0.895 -2.757 1.651 D 154 152 3 155 3 0 7 111 188 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 13 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - U - - - ML 156 155 3 158 3 1 11 112 190 -6.348 -0.036 -6.348 -1.572 0.275 -1.364 1.046 D 157 155 3 158 3 0 7 109 187 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 13 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - C - - - ML 159 158 3 161 3 1 10 111 189 -6.348 -0.036 -6.348 -2.800 1.640 -3.073 -0.688 D 160 158 3 161 3 0 6 108 186 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 12 119 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - u - - - ML 162 161 3 164 3 1 10 110 187 -3.826 -0.125 -6.348 -0.857 -0.178 -0.676 0.955 D 163 161 3 164 3 0 5 107 184 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 10 110 187 -4.645 -0.059 -12.289 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - G - - - ML 165 164 3 167 3 1 9 109 186 -6.348 -0.036 -6.348 -1.403 -3.320 1.764 -3.007 D 166 164 3 167 3 0 5 106 183 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 10 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - A - - - ML 168 167 3 170 3 1 8 107 185 -6.348 -0.036 -6.348 1.227 -1.102 -0.429 -1.148 D 169 167 3 170 3 0 4 104 182 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 9 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - G - - - ML 171 170 3 173 3 1 7 106 183 -6.348 -0.036 -6.348 -0.417 -1.542 1.388 -1.779 D 172 170 3 173 3 0 4 103 180 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 8 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - C - - - ML 174 173 3 176 3 1 6 105 182 -6.348 -0.155 -3.483 -2.905 1.696 -3.189 -0.952 D 175 173 3 176 3 0 4 102 179 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 8 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - C - - - ML 177 176 3 179 3 1 6 104 181 -6.233 -0.039 -6.233 -1.541 1.713 -2.926 -2.027 D 178 176 3 179 3 0 3 102 179 -13.181 -0.350 -2.215 IL 179 179 3 179 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - U - - - ML 180 179 3 182 3 1 5 102 179 -6.348 -0.036 -6.348 -1.651 -0.504 -1.314 1.364 D 181 179 3 182 3 0 1 99 176 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 6 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 65 - G - - - ML 183 182 3 185 3 1 4 101 178 -6.348 -0.098 -4.233 -0.953 -1.751 1.213 -0.204 D 184 182 3 185 3 0 1 98 175 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 6 109 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 66 - a - - - ML 186 185 3 188 3 1 4 100 176 -6.288 -0.037 -6.288 0.800 -1.018 0.229 -0.751 D 187 185 3 188 3 0 0 97 174 -12.629 -0.548 -1.663 IL 188 188 3 188 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 67 - U - - - ML 189 188 3 191 3 1 4 98 175 -6.348 -0.036 -6.348 -2.520 -0.895 -2.757 1.651 D 190 188 3 191 3 0 0 95 171 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 5 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 68 - G - - - ML 192 191 3 194 3 1 3 97 173 -6.348 -0.036 -6.348 -0.879 -3.080 1.673 -2.750 D 193 191 3 194 3 0 0 94 170 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 5 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 69 - G - - - ML 195 194 3 197 3 1 3 96 172 -6.348 -0.036 -6.348 -1.271 -2.648 1.647 -1.760 D 196 194 3 197 3 0 0 92 168 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 4 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 70 - A - - - ML 198 197 3 200 3 1 3 94 170 -6.348 -0.036 -6.348 1.811 -3.365 -1.849 -3.103 D 199 197 3 200 3 0 0 91 167 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 4 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 71 - U - - - ML 201 200 3 203 3 1 2 93 169 -6.348 -0.036 -6.348 -1.075 -1.531 -0.903 1.403 D 202 200 3 203 3 0 0 90 165 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 3 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 72 - U - - - ML 204 203 3 206 3 1 2 91 167 -6.348 -0.036 -6.348 -1.745 -0.600 -1.442 1.419 D 205 203 3 206 3 0 0 88 164 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 3 100 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 73 - U - - - ML 207 206 3 209 3 1 2 90 166 -6.348 -0.036 -6.348 -3.266 -2.674 -3.470 1.868 D 208 206 3 209 3 0 0 87 162 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 2 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 74 - A - - - ML 210 209 3 212 3 1 1 89 164 -6.348 -0.036 -6.348 1.485 -2.507 -0.314 -2.175 D 211 209 3 212 3 0 0 85 160 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 2 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 75 - C - - - ML 213 212 3 215 3 1 1 87 162 -6.348 -0.036 -6.348 -2.884 1.686 -3.166 -0.898 D 214 212 3 215 3 0 0 84 159 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 2 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 76 - A - - - ML 216 215 3 218 3 1 1 86 161 -6.348 -0.072 -4.773 1.771 -3.195 -1.538 -2.917 D 217 215 3 218 3 0 0 82 157 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 2 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 77 - G - - - ML 219 218 3 221 3 1 1 85 159 -6.313 -0.037 -6.313 -0.928 -3.054 1.679 -2.726 D 220 218 3 221 3 0 0 81 155 -12.282 -2.317 -0.324 IL 221 221 3 221 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 78 - U - - - ML 222 221 3 224 3 1 1 83 158 -6.313 -0.037 -6.313 -0.533 -0.656 -1.000 1.121 D 223 221 3 224 3 0 0 80 154 -12.282 -2.317 -0.324 IL 224 224 3 224 3 1 1 92 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 79 - G - - - ML 225 224 3 227 3 1 1 82 156 -6.313 -0.037 -6.313 -0.832 -1.686 1.524 -1.989 D 226 224 3 227 3 0 0 79 153 -12.282 -0.741 -1.317 IL 227 227 3 227 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 80 - A - - - ML 228 227 3 230 3 1 1 80 154 -6.348 -0.036 -6.348 1.929 -4.180 -3.746 -3.999 D 229 227 3 230 3 0 0 77 151 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 81 - U - - - ML 231 230 3 233 3 1 1 79 153 -6.348 -0.036 -6.348 -1.348 -0.863 -0.478 1.226 D 232 230 3 233 3 0 0 75 149 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 82 - a - - - ML 234 233 3 236 3 1 1 77 151 -6.348 -0.036 -6.348 0.927 -0.774 0.001 -0.964 D 235 233 3 236 3 0 0 74 147 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 83 - u - - - ML 237 236 3 239 3 1 1 76 149 -6.348 -0.036 -6.348 -1.269 0.311 -0.753 0.809 D 238 236 3 239 3 0 0 72 146 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 84 - U - - - ML 240 239 3 242 3 1 1 74 148 -6.348 -0.036 -6.348 -1.366 -0.782 -0.588 1.242 D 241 239 3 242 3 0 0 71 144 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 85 - c - - - ML 243 242 3 245 3 1 1 73 146 -6.348 -0.036 -6.348 -0.734 0.634 -0.480 0.177 D 244 242 3 245 3 0 0 69 142 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 86 - a - - - ML 246 245 3 248 3 1 1 71 144 -6.348 -0.036 -6.348 0.568 -1.321 0.422 -0.364 D 247 245 3 248 3 0 0 68 140 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 1 81 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 87 - G - - - ML 249 248 3 251 3 1 1 70 142 -6.348 -0.036 -6.348 -0.677 -2.173 1.439 -1.178 D 250 248 3 251 3 0 0 66 138 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 88 - c - - - ML 252 251 3 254 3 1 1 68 141 -6.348 -0.036 -6.348 -1.690 0.953 -1.486 0.483 D 253 251 3 254 3 0 0 65 137 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 89 - u - - - ML 255 254 3 257 3 1 1 67 139 -6.348 -0.036 -6.348 -1.251 0.363 -0.703 0.748 D 256 254 3 257 3 0 0 63 135 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 90 - g - - - ML 258 257 3 260 3 1 1 65 137 -6.348 -0.036 -6.348 -0.029 -1.000 0.777 -0.311 D 259 257 3 260 3 0 0 61 133 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 75 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 91 - C - - - ML 261 260 3 263 3 1 1 63 135 -6.348 -0.086 -4.456 -2.548 1.466 -2.795 -0.115 D 262 260 3 263 3 0 0 60 131 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 92 - C - - - ML 264 263 3 266 3 1 1 61 133 -6.300 -0.037 -6.300 -2.281 1.560 -1.902 -0.791 D 265 263 3 266 3 0 0 59 130 -12.480 -0.622 -1.514 IL 266 266 3 266 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 93 - U - - - ML 267 266 3 269 3 1 1 60 131 -6.348 -0.036 -6.348 -0.640 -0.960 -1.711 1.344 D 268 266 3 269 3 0 0 56 126 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 94 - G - - - ML 270 269 3 272 3 1 1 58 128 -6.348 -0.115 -3.957 -2.898 -4.067 1.901 -3.796 D 271 269 3 272 3 0 0 54 124 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 95 - G - - - ML 273 272 3 275 3 1 1 56 126 -6.271 -0.038 -6.271 -0.819 -1.400 1.334 -0.910 D 274 272 3 275 3 0 0 52 122 -12.823 -0.466 -1.858 IL 275 275 3 275 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 96 - G - - - ML 276 275 3 278 3 1 1 53 123 -6.348 -0.036 -6.348 -2.090 -3.051 1.766 -2.033 D 277 275 3 278 3 0 0 47 117 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 97 - G - - - ML 279 278 3 281 3 1 1 50 120 -6.348 -0.036 -6.348 -1.841 -2.527 1.597 -0.937 D 280 278 3 281 3 0 0 43 112 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 98 - A - - - ML 282 281 3 284 3 1 1 47 116 -6.348 -0.158 -3.448 1.368 -2.379 -0.024 -2.038 D 283 281 3 284 3 0 0 32 101 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 99 - A - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 1.097 -0.966 -0.498 -0.641 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 96 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PVT1_3 ACC RF02166 DESC Pvt1 oncogene conserved region 3 LENG 95 MAXL 174 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Fri Jul 5 01:35:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02166/CM NSEQ 25 EFFN 5.947876 CKSUM 391300754 STATS LOCAL MSV -8.8018 0.71835 STATS LOCAL VITERBI -9.8826 0.71835 STATS LOCAL FORWARD -3.7631 0.71835 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.56000 1.43266 1.28060 1.29710 1.38629 1.38629 1.38629 1.38629 0.13474 5.57735 2.10150 0.39730 1.11515 0.00000 * 1 1.99912 0.69889 1.99011 1.46652 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02777 4.29079 4.29079 1.46634 0.26236 0.65268 0.73533 2 2.56319 0.49868 2.20366 1.58371 - C - - : 1.38629 1.38629 1.38629 1.38629 0.27432 4.35655 1.48241 1.46634 0.26236 1.87039 0.16731 3 1.51123 0.91046 1.88896 1.48814 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03318 4.11542 4.11542 1.46634 0.26236 0.16876 1.86248 4 1.91522 1.91343 2.55623 0.46598 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04990 4.38047 3.31991 1.46634 0.26236 1.52667 0.24495 5 1.96779 0.56796 2.61631 1.51195 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 6 1.02204 1.54989 1.24492 1.96678 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 7 1.30931 1.52734 2.23924 0.90056 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 8 1.98877 2.17260 0.39509 2.58178 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 9 0.61744 1.91653 1.68144 2.05998 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 10 1.68938 1.59954 1.50822 0.93631 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 11 1.73235 2.87830 0.40167 2.32588 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05680 3.16076 4.35655 0.08114 2.55185 1.87039 0.16731 12 1.27264 3.09503 0.48303 2.85206 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 13 3.25809 0.25452 3.44399 1.86878 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 14 1.89353 1.52983 2.43954 0.60571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 15 1.74642 2.87204 0.40166 2.30448 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 16 1.88927 1.60311 2.45001 0.57758 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 1.87039 0.16731 17 1.63947 2.30164 0.51785 2.20709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02598 4.35655 4.35655 1.46634 0.26236 0.91379 0.51250 18 2.86801 0.33412 2.46859 1.94830 - C - - : 1.38629 1.38629 1.38629 1.38629 0.11867 4.37690 2.30927 1.46634 0.26236 0.52622 0.89364 19 3.30629 0.19983 3.50030 2.16905 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02719 4.31177 4.31177 1.46634 0.26236 0.22552 1.60000 20 3.16623 2.09430 3.33303 0.22440 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 21 2.52599 3.76797 0.14111 3.55680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06770 4.40034 2.93402 1.46634 0.26236 1.09861 0.40547 22 2.83157 1.24428 2.97755 0.50747 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06318 4.35857 3.02770 1.46634 0.26236 1.84582 0.17185 23 2.45887 0.19761 3.42012 2.79578 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02690 4.32229 4.32229 1.46634 0.26236 0.74389 0.64486 24 0.65723 2.00152 1.84356 1.66954 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 25 2.10483 2.53669 0.34175 2.42498 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 26 2.82009 0.99644 2.96512 0.65459 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 27 1.91920 1.68445 2.48857 0.53666 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 28 1.72070 2.31050 0.51092 2.10450 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 29 3.17131 0.31719 3.34748 1.63635 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 1.75515 0.18981 30 0.80493 1.61464 1.66291 1.80586 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02574 4.36557 4.36557 1.46634 0.26236 0.42428 1.06201 31 2.07162 1.37981 2.54715 0.60865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 32 2.15946 3.59525 0.19502 3.37155 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 33 2.10924 2.41565 0.31793 2.78538 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 34 0.23956 3.34523 2.00927 3.13068 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 35 1.87202 2.41258 0.41189 2.36229 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06053 4.40034 3.06915 1.46634 0.26236 1.09861 0.40547 36 2.65011 0.24274 3.30300 2.22462 - C - - : 1.38629 1.38629 1.38629 1.38629 0.09769 2.52118 4.36556 0.34140 1.24055 0.42417 1.06222 37 1.85569 1.64985 1.69760 0.75832 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 38 1.88656 1.60255 2.01434 0.66628 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 39 2.12439 0.70166 2.15550 1.31346 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 40 1.18530 1.86564 1.10100 1.57498 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 41 2.47464 1.25949 2.32297 0.62731 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 42 2.97653 1.55507 3.13017 0.36507 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 43 2.46631 0.56362 1.92156 1.61156 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 44 0.47749 2.26356 1.76322 2.26151 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 45 0.69842 2.05706 1.37782 2.09824 - a - - : 1.38629 1.38629 1.38629 1.38629 0.21142 4.40034 1.72432 1.46634 0.26236 1.09861 0.40547 46 1.83409 3.18755 0.29187 2.95450 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02987 4.21879 4.21879 1.46634 0.26236 0.87209 0.54142 47 1.80434 2.58371 0.51849 1.80482 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02745 4.30219 4.30219 1.46634 0.26236 1.06679 0.42176 48 0.70352 1.81164 1.92411 1.63083 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02649 4.33748 4.33748 1.46634 0.26236 2.07492 0.13418 49 2.92804 1.72799 3.08154 0.32439 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02649 4.33748 4.33748 1.46634 0.26236 0.28919 1.38178 50 1.69149 2.62820 2.81039 0.38072 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 51 3.13287 2.00685 3.29751 0.24205 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 52 2.47586 1.19540 2.33197 0.66122 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 53 3.32738 0.24945 3.51656 1.86316 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 54 1.98040 1.50992 1.85485 0.72447 - u - - : 1.38629 1.38629 1.38629 1.38629 0.08640 2.65218 4.40034 0.04079 3.21968 1.09861 0.40547 55 2.35849 3.68762 0.16334 3.47050 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 56 0.53595 2.15042 1.68385 2.18218 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 57 1.67561 2.45521 0.42444 2.61967 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 58 3.39964 0.21081 3.59654 2.04583 - C - - : 1.38629 1.38629 1.38629 1.38629 0.10723 4.40034 2.41455 1.46634 0.26236 1.09861 0.40547 59 2.45432 0.19865 3.41429 2.79134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02696 4.32007 4.32007 1.46634 0.26236 0.24259 1.53524 60 2.53065 1.73563 2.29737 0.44071 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 61 2.04710 2.60001 0.54536 1.52791 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06770 4.40034 2.93402 1.46634 0.26236 1.09861 0.40547 62 0.83209 2.09205 1.22787 1.90709 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02593 4.35857 4.35857 1.46634 0.26236 0.37949 1.15267 63 3.13287 2.00685 3.29751 0.24205 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 64 1.99556 3.52089 0.22649 3.29242 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 65 2.26742 3.22209 0.24494 2.60646 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 66 0.13099 3.71840 2.66773 3.53731 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 67 2.13160 2.44744 2.01222 0.41378 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 68 2.59587 1.80201 2.38596 0.40279 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 69 3.65032 3.24011 3.79126 0.09180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 70 0.35730 3.12429 1.60389 2.89392 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 71 3.38551 0.21798 3.58092 2.00883 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 72 0.15839 3.60064 2.45264 3.40800 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05008 4.40034 3.30833 1.46634 0.26236 1.09861 0.40547 73 2.02948 3.50343 0.22224 3.27597 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02548 4.37574 4.37574 1.46634 0.26236 1.60548 0.22414 74 1.75574 1.84115 2.07964 0.60952 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02548 4.37574 4.37574 1.46634 0.26236 1.60548 0.22414 75 1.96286 2.55480 0.33012 2.76464 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02548 4.37574 4.37574 1.46634 0.26236 0.51347 0.91233 76 0.04926 4.28336 3.98259 4.15807 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 77 2.32093 1.98441 1.71729 0.53648 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 78 0.74368 1.92255 1.38528 2.05455 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 79 2.26587 1.17102 1.90839 0.82578 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 80 2.33302 1.92835 1.79393 0.52543 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 81 1.89498 0.94715 1.71897 1.26378 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 82 0.99262 2.30183 1.09353 1.63840 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 83 1.85564 2.89280 0.38901 2.20278 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 84 2.55801 0.72599 2.41622 1.05143 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 85 2.25315 1.13483 1.87329 0.86788 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 86 1.40619 2.07948 0.84772 1.60177 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 87 3.15261 0.37037 3.32376 1.46635 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05957 4.40034 3.08877 1.46634 0.26236 1.09861 0.40547 88 2.96761 0.30489 2.70492 1.93451 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02572 4.36649 4.36649 1.46634 0.26236 0.43100 1.04943 89 1.83014 2.05193 2.57225 0.45451 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02485 4.40034 4.40034 1.46634 0.26236 1.09861 0.40547 90 3.39524 4.20505 0.06877 4.01728 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07977 4.40034 2.74267 1.46634 0.26236 1.09861 0.40547 91 1.95372 2.35668 0.46129 2.01703 - 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