INFERNAL1/a [1.1.5 | Sep 2023] NAME MEG8_3 ACC RF02147 DESC Maternally expressed 8 exon 3 STATES 202 NODES 68 CLEN 66 W 143 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 04:34:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02147/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 4.545898 CKSUM 576239823 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 41.10 NC 39.20 EFP7GF -10.6407 0.71880 ECMLC 0.68594 -10.02627 -0.46383 1600000 846871 0.001417 ECMGC 0.37457 -21.40846 -6.25452 1600000 116732 0.003427 ECMLI 0.65713 -8.62105 0.64571 1600000 529403 0.002267 ECMGI 0.40196 -14.20467 -1.19605 1600000 74639 0.005359 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 143 225 -7.750 -7.957 -0.030 -6.371 IL 1 1 2 1 4 1 25 145 227 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 145 227 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 25 143 225 -6.076 -0.043 -6.076 -2.704 -2.198 -2.897 1.805 D 4 2 3 5 3 0 20 140 222 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 26 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 24 142 224 -6.076 -0.043 -6.076 -1.994 -0.650 -2.207 1.534 D 7 5 3 8 3 0 19 139 220 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 25 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 23 141 222 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 10 8 3 11 3 0 18 138 219 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 25 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 22 140 221 -6.076 -0.043 -6.076 -0.922 -2.727 1.647 -2.400 D 13 11 3 14 3 0 17 137 218 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 24 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 22 138 220 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 16 14 3 17 3 0 17 135 216 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 23 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 21 137 218 -6.076 -0.043 -6.076 -1.619 -1.557 -0.723 1.448 D 19 17 3 20 3 0 16 134 215 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 22 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 20 136 217 -6.076 -0.043 -6.076 -1.955 -0.542 -2.166 1.502 D 22 20 3 23 3 0 15 133 213 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 22 143 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 19 135 215 -6.076 -0.043 -6.076 -1.589 -1.056 1.543 -1.879 D 25 23 3 26 3 0 14 131 212 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 21 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 19 133 214 -6.076 -0.043 -6.076 -1.410 -1.430 -0.283 1.281 D 28 26 3 29 3 0 14 130 211 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 20 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 18 132 212 -6.076 -0.043 -6.076 -1.958 -0.551 -2.169 1.505 D 31 29 3 32 3 0 13 129 209 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 19 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - C - - - ML 33 32 3 35 3 1 17 131 211 -6.076 -0.043 -6.076 -2.304 1.560 -2.550 -0.561 D 34 32 3 35 3 0 12 128 208 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 19 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 16 129 210 -6.076 -0.043 -6.076 1.040 -0.634 -0.454 -0.814 D 37 35 3 38 3 0 11 126 206 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 18 136 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 16 128 208 -6.076 -0.043 -6.076 1.887 -3.496 -3.161 -3.294 D 40 38 3 41 3 0 11 125 205 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 17 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 15 127 207 -6.076 -0.043 -6.076 0.334 -2.039 1.127 -1.684 D 43 41 3 44 3 0 10 124 203 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 17 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 14 126 205 -6.076 -0.043 -6.076 -1.619 -1.557 -0.723 1.448 D 46 44 3 47 3 0 9 122 202 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 16 133 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 1 14 124 204 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 49 47 3 50 3 0 8 121 201 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 15 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 13 123 202 -6.076 -0.043 -6.076 1.887 -3.496 -3.161 -3.294 D 52 50 3 53 3 0 8 120 199 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 14 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 54 53 3 56 3 1 12 122 201 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 55 53 3 56 3 0 7 119 198 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 14 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 57 56 3 59 3 1 12 120 200 -6.076 -0.043 -6.076 -2.012 -0.697 -2.226 1.547 D 58 56 3 59 3 0 6 117 196 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 13 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 60 59 3 62 3 1 11 119 198 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 61 59 3 62 3 0 6 116 195 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 12 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 10 118 197 -6.076 -0.043 -6.076 -2.704 -2.198 -2.897 1.805 D 64 62 3 65 3 0 5 115 193 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 12 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - c - - - ML 66 65 3 68 3 1 10 116 195 -6.076 -0.043 -6.076 -1.755 0.817 -1.956 0.752 D 67 65 3 68 3 0 4 113 192 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 11 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 69 68 3 71 3 1 9 115 194 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 70 68 3 71 3 0 4 112 190 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 10 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 8 114 192 -6.076 -0.043 -6.076 1.887 -3.496 -3.161 -3.294 D 73 71 3 74 3 0 3 111 189 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 10 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 8 112 191 -6.076 -0.043 -6.076 1.336 -1.972 -0.156 -1.631 D 76 74 3 77 3 0 3 109 187 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 9 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 78 77 3 80 3 1 7 111 189 -6.076 -0.043 -6.076 1.605 -2.361 -0.938 -2.050 D 79 77 3 80 3 0 2 108 186 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 8 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - c - - - ML 81 80 3 83 3 1 6 110 188 -6.076 -0.043 -6.076 -0.512 0.788 -1.311 0.225 D 82 80 3 83 3 0 1 107 184 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 8 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 6 108 186 -6.076 -0.043 -6.076 -2.012 -0.697 -2.226 1.547 D 85 83 3 86 3 0 1 105 183 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 7 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - c - - - ML 87 86 3 89 3 1 5 107 185 -6.076 -0.043 -6.076 0.626 0.735 -1.583 -1.122 D 88 86 3 89 3 0 0 104 181 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 7 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 90 89 3 92 3 1 5 106 183 -6.076 -0.043 -6.076 -2.704 -2.198 -2.897 1.805 D 91 89 3 92 3 0 0 102 180 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 6 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - u - - - ML 93 92 3 95 3 1 4 104 182 -6.076 -0.043 -6.076 -1.738 0.719 -1.937 0.842 D 94 92 3 95 3 0 0 101 178 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 6 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 96 95 3 98 3 1 4 103 180 -6.076 -0.043 -6.076 -0.821 -1.590 -1.911 1.504 D 97 95 3 98 3 0 0 100 177 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 5 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - C - - - ML 99 98 3 101 3 1 3 102 179 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 100 98 3 101 3 0 0 98 175 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 5 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - C - - - ML 102 101 3 104 3 1 3 100 177 -6.076 -0.043 -6.076 -2.370 1.600 -2.622 -0.709 D 103 101 3 104 3 0 0 97 174 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 4 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 2 99 176 -6.076 -0.043 -6.076 -1.958 -0.551 -2.169 1.505 D 106 104 3 107 3 0 0 96 172 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 4 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 108 107 3 110 3 1 2 97 174 -6.076 -0.043 -6.076 -0.815 -2.672 1.622 -2.341 D 109 107 3 110 3 0 0 94 170 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 3 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 2 96 172 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 112 110 3 113 3 0 0 93 169 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 3 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 114 113 3 116 3 1 1 95 171 -6.076 -0.043 -6.076 1.130 -0.581 -1.290 -0.447 D 115 113 3 116 3 0 0 91 167 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - c - - - ML 117 116 3 119 3 1 1 93 169 -6.076 -0.043 -6.076 -1.046 0.724 0.076 -0.305 D 118 116 3 119 3 0 0 90 166 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 2 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - U - - - ML 120 119 3 122 3 1 1 92 168 -3.431 -0.164 -6.076 -2.704 -2.198 -2.897 1.805 D 121 119 3 122 3 0 0 89 165 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 2 92 168 -4.785 -0.054 -12.429 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - U - - - ML 123 122 3 125 3 1 1 91 167 -6.076 -0.043 -6.076 -2.704 -2.198 -2.897 1.805 D 124 122 3 125 3 0 0 88 163 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 2 99 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 126 125 3 128 3 1 1 89 165 -6.076 -0.043 -6.076 -2.704 -2.198 -2.897 1.805 D 127 125 3 128 3 0 0 86 162 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - C - - - ML 129 128 3 131 3 1 1 88 163 -6.076 -0.140 -3.690 -2.106 1.558 -1.010 -1.618 D 130 128 3 131 3 0 0 85 160 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - A - - - ML 132 131 3 134 3 1 1 86 162 -2.043 -0.431 -5.983 1.865 -3.252 -2.942 -3.042 D 133 131 3 134 3 0 0 84 159 -12.819 -0.468 -1.853 IL 134 134 3 134 3 1 2 87 162 -1.281 -0.765 -14.579 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - g - - - ML 135 134 3 137 3 1 1 85 160 -6.076 -0.043 -6.076 0.527 -1.944 0.976 -1.588 D 136 134 3 137 3 0 0 82 156 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - G - - - ML 138 137 3 140 3 1 1 83 158 -6.076 -0.043 -6.076 -1.630 -1.290 1.593 -1.993 D 139 137 3 140 3 0 0 80 155 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - G - - - ML 141 140 3 143 3 1 1 82 157 -6.076 -0.043 -6.076 -0.892 -2.712 1.640 -2.383 D 142 140 3 143 3 0 0 79 153 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - G - - - ML 144 143 3 146 3 1 1 81 155 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 145 143 3 146 3 0 0 77 151 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - G - - - ML 147 146 3 149 3 1 1 79 153 -6.076 -0.043 -6.076 -1.486 -0.421 1.356 -1.569 D 148 146 3 149 3 0 0 75 149 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - C - - - ML 150 149 3 152 3 1 1 77 152 -6.076 -0.043 -6.076 -0.306 1.355 -1.995 -1.391 D 151 149 3 152 3 0 0 74 148 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - a - - - ML 153 152 3 155 3 1 1 76 150 -6.076 -0.043 -6.076 0.670 -0.560 -0.425 -0.020 D 154 152 3 155 3 0 0 72 146 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - C - - - ML 156 155 3 158 3 1 1 74 148 -6.076 -0.043 -6.076 -2.945 1.824 -3.192 -2.178 D 157 155 3 158 3 0 0 71 144 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 159 158 3 161 3 1 1 73 146 -6.076 -0.043 -6.076 -1.807 -0.066 -2.009 1.328 D 160 158 3 161 3 0 0 69 142 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - G - - - ML 162 161 3 164 3 1 1 71 144 -6.076 -0.043 -6.076 -0.892 -2.712 1.640 -2.383 D 163 161 3 164 3 0 0 67 140 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - G - - - ML 165 164 3 167 3 1 1 70 142 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 166 164 3 167 3 0 0 66 138 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - G - - - ML 168 167 3 170 3 1 1 68 140 -6.076 -0.043 -6.076 -2.499 -3.548 1.862 -3.276 D 169 167 3 170 3 0 0 64 136 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - g - - - ML 171 170 3 173 3 1 1 66 138 -6.076 -0.043 -6.076 0.239 -0.702 0.740 -0.904 D 172 170 3 173 3 0 0 62 134 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - U - - - ML 174 173 3 176 3 1 1 64 136 -6.076 -0.043 -6.076 -1.833 -0.164 -2.037 1.369 D 175 173 3 176 3 0 0 60 132 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - U - - - ML 177 176 3 179 3 1 1 63 134 -6.076 -0.043 -6.076 -1.699 -1.605 -0.875 1.495 D 178 176 3 179 3 0 0 58 129 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - c - - - ML 180 179 3 182 3 1 1 61 132 -6.076 -0.043 -6.076 0.183 0.421 -0.513 -0.278 D 181 179 3 182 3 0 0 56 127 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - U - - - ML 183 182 3 185 3 1 1 59 130 -6.076 -0.043 -6.076 -1.735 0.330 -1.934 1.125 D 184 182 3 185 3 0 0 54 124 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - a - - - ML 186 185 3 188 3 1 1 56 127 -6.076 -0.043 -6.076 0.897 -0.652 -0.129 -0.770 D 187 185 3 188 3 0 0 51 121 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 67 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - G - - - ML 189 188 3 191 3 1 1 54 124 -6.076 -0.043 -6.076 -0.948 -2.741 1.653 -2.414 D 190 188 3 191 3 0 0 48 118 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - a - - - ML 192 191 3 194 3 1 1 51 121 -6.076 -0.043 -6.076 0.878 -0.637 -0.104 -0.765 D 193 191 3 194 3 0 0 43 113 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 68 - A - - - ML 195 194 3 197 3 1 1 47 116 -6.076 -0.043 -6.076 1.887 -3.496 -3.161 -3.294 D 196 194 3 197 3 0 0 32 101 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 69 - G - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 -0.915 -2.724 1.645 -2.396 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MEG8_3 ACC RF02147 DESC Maternally expressed 8 exon 3 LENG 66 MAXL 143 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Mon Jul 8 04:34:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02147/CM NSEQ 10 EFFN 4.545898 CKSUM 576239823 STATS LOCAL MSV -7.9869 0.71880 STATS LOCAL VITERBI -8.8084 0.71880 STATS LOCAL FORWARD -3.6515 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.56208 1.45905 1.31824 1.23706 1.38629 1.38629 1.38629 1.38629 0.01724 5.37161 4.38643 0.39730 1.11515 0.00000 * 1 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 2 2.76846 1.83663 2.91635 0.32330 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 3 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 4 2.02549 3.27676 0.24468 3.04991 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 5 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 6 2.50824 2.46519 1.88772 0.38246 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 7 2.74106 1.76194 2.88740 0.34522 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 8 2.48740 2.11844 0.31652 2.68866 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 9 2.36330 2.37770 1.58244 0.49815 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 10 2.74333 1.76826 2.88980 0.34330 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 11 2.98327 0.30485 3.15366 1.77521 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 12 0.66533 1.82565 1.70078 1.95021 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 13 0.07860 3.80941 3.57725 3.66984 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 14 1.15447 2.79930 0.60497 2.55322 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 15 2.50824 2.46519 1.88772 0.38246 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 16 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 17 0.07860 3.80941 3.57725 3.66984 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 18 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 19 2.78095 1.86965 2.92954 0.31413 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 20 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 21 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 22 2.60297 0.82022 2.74179 0.86475 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 23 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 24 0.07860 3.80941 3.57725 3.66984 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 25 0.46012 2.75352 1.49435 2.51704 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 26 0.27379 3.02286 2.03655 2.80723 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 27 1.74110 0.83980 2.29521 1.23055 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 28 2.78095 1.86965 2.92954 0.31413 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 29 0.95270 0.87704 2.48383 2.16401 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 30 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 31 2.59117 0.88777 2.72912 0.80248 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 32 1.95522 2.48821 2.71080 0.34401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 33 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 34 3.02922 0.27697 3.20383 1.87758 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 35 2.74333 1.76826 2.88980 0.34330 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 36 1.95093 3.23824 0.26231 3.00883 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 37 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 38 0.60278 1.78903 2.28034 1.69642 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 39 2.11152 0.88433 1.33332 1.59774 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 40 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.11374 2.37851 4.21152 0.03695 3.31649 1.09861 0.40547 41 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 42 3.26025 2.90957 3.39444 0.13518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 43 2.84606 0.30609 2.08617 2.50779 - C - - : 1.38629 1.38629 1.38629 1.38629 0.09683 4.21152 2.55789 1.46634 0.26236 1.09861 0.40547 44 0.09335 3.64019 3.42572 3.49482 - A - - : 1.38629 1.38629 1.38629 1.38629 0.29902 1.41616 4.14683 0.52998 0.88822 0.32404 1.28453 45 1.02096 2.73411 0.70998 2.48713 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 46 2.51605 2.28055 0.28213 2.76756 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 47 2.00450 3.26595 0.24949 3.03836 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 48 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 49 2.41648 1.67835 0.44661 2.47351 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 50 1.59813 0.44678 2.76927 2.35039 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 51 0.92200 1.77458 1.68123 1.40008 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 52 3.42731 0.12225 3.59894 2.89598 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 53 2.63880 1.43170 2.77908 0.46592 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 54 2.00450 3.26595 0.24949 3.03836 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 55 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 56 3.11847 3.84580 0.09585 3.65709 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 57 1.22036 1.87259 0.87329 2.01311 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 58 2.65677 1.49966 2.79813 0.43743 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 59 2.56379 2.49851 1.99250 0.35037 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 60 1.25951 1.09435 1.74180 1.57870 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 61 2.58914 1.15775 2.72659 0.60645 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 62 0.76420 1.83834 1.47557 1.92029 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 63 2.04361 3.28608 0.24061 3.05988 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 64 0.77759 1.82811 1.45830 1.91636 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 65 0.07860 3.80941 3.57725 3.66984 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03010 4.21152 4.21152 1.46634 0.26236 1.09861 0.40547 66 2.02049 3.27419 0.24581 3.04716 - G - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //