INFERNAL1/a [1.1.4 | Dec 2020] NAME HOXA11-AS1_1 ACC RF02137 DESC HOXA11 antisense RNA 1 conserved region 1 STATES 292 NODES 98 CLEN 96 W 189 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:49:46 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 2.230225 CKSUM 3868784332 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.90 NC 32.50 EFP7GF -7.4437 0.71834 ECMLC 0.66189 -10.30204 -1.34670 1600000 450249 0.002665 ECMGC 0.37084 -18.67271 -6.54938 1600000 35855 0.011156 ECMLI 0.48644 -10.43061 0.69679 1600000 269104 0.004459 ECMGI 0.42488 -8.11922 2.11359 1600000 30922 0.012936 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 189 278 -7.066 -7.273 -0.049 -5.687 IL 1 1 2 1 4 8 43 191 280 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 8 42 191 280 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 8 42 190 279 -5.469 -0.067 -5.469 -0.624 -1.055 1.244 -0.995 D 4 2 3 5 3 4 38 186 275 -11.551 -1.585 -0.585 IL 5 5 3 5 3 9 44 195 285 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 7 41 188 277 -5.469 -0.067 -5.469 -0.856 -0.873 -0.352 1.083 D 7 5 3 8 3 3 37 185 274 -11.551 -1.585 -0.585 IL 8 8 3 8 3 9 43 194 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 7 40 187 276 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 10 8 3 11 3 3 36 184 272 -11.551 -1.585 -0.585 IL 11 11 3 11 3 8 42 193 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 6 40 186 274 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 13 11 3 14 3 2 35 183 271 -11.551 -1.585 -0.585 IL 14 14 3 14 3 8 41 192 281 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 6 39 185 273 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 16 14 3 17 3 2 34 181 270 -11.551 -1.585 -0.585 IL 17 17 3 17 3 7 41 190 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 5 38 183 272 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 19 17 3 20 3 1 34 180 268 -11.551 -1.585 -0.585 IL 20 20 3 20 3 7 40 189 278 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 5 37 182 270 -5.469 -0.067 -5.469 -1.246 1.198 -1.425 -0.132 D 22 20 3 23 3 1 33 179 267 -11.551 -1.585 -0.585 IL 23 23 3 23 3 6 39 188 277 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 4 36 181 269 -5.469 -0.067 -5.469 -1.040 -1.044 1.371 -1.175 D 25 23 3 26 3 1 32 178 265 -11.551 -1.585 -0.585 IL 26 26 3 26 3 6 38 187 275 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 4 36 179 267 -5.469 -0.067 -5.469 -0.803 -1.822 1.481 -1.500 D 28 26 3 29 3 0 31 176 264 -11.551 -1.585 -0.585 IL 29 29 3 29 3 5 37 185 274 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 4 35 178 266 -5.469 -0.067 -5.469 -0.786 -0.299 -0.677 0.987 D 31 29 3 32 3 0 30 175 263 -11.551 -1.585 -0.585 IL 32 32 3 32 3 5 37 184 273 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 3 34 177 265 -5.469 -0.067 -5.469 -0.461 -1.632 1.347 -1.294 D 34 32 3 35 3 0 30 174 261 -11.551 -1.585 -0.585 IL 35 35 3 35 3 5 36 183 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 3 33 176 263 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 37 35 3 38 3 0 29 172 260 -11.551 -1.585 -0.585 IL 38 38 3 38 3 4 35 181 270 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 3 32 174 262 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 40 38 3 41 3 0 28 171 258 -11.551 -1.585 -0.585 IL 41 41 3 41 3 4 34 180 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 42 41 3 44 3 2 32 173 260 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 43 41 3 44 3 0 27 170 257 -11.551 -1.585 -0.585 IL 44 44 3 44 3 3 34 179 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 2 31 172 259 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 46 44 3 47 3 0 27 168 255 -11.551 -1.585 -0.585 IL 47 47 3 47 3 3 33 178 266 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 2 30 170 257 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 49 47 3 50 3 0 26 167 254 -11.551 -1.585 -0.585 IL 50 50 3 50 3 3 32 176 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 2 29 169 256 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 52 50 3 53 3 0 25 166 253 -11.551 -1.585 -0.585 IL 53 53 3 53 3 3 31 175 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 54 53 3 56 3 1 29 168 255 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 55 53 3 56 3 0 24 165 251 -11.551 -1.585 -0.585 IL 56 56 3 56 3 2 30 174 261 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 28 166 253 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 58 56 3 59 3 0 23 163 250 -11.551 -1.585 -0.585 IL 59 59 3 59 3 2 30 172 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 60 59 3 62 3 1 27 165 252 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 61 59 3 62 3 0 23 162 248 -11.551 -1.585 -0.585 IL 62 62 3 62 3 2 29 171 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 26 164 250 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 64 62 3 65 3 0 22 161 247 -11.551 -1.585 -0.585 IL 65 65 3 65 3 2 28 170 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 66 65 3 68 3 1 26 163 249 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 67 65 3 68 3 0 21 159 245 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 27 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - A - - - ML 69 68 3 71 3 1 25 161 247 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 70 68 3 71 3 0 20 158 244 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 27 167 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 72 71 3 74 3 1 24 160 246 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 73 71 3 74 3 0 20 157 242 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 26 166 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - C - - - ML 75 74 3 77 3 1 23 159 244 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 76 74 3 77 3 0 19 155 241 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 25 165 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - a - - - ML 78 77 3 80 3 1 23 157 243 -5.469 -0.067 -5.469 0.769 -0.778 -0.376 -0.086 D 79 77 3 80 3 0 18 154 240 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 24 163 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 22 156 241 -3.350 -0.186 -5.469 -1.706 1.567 -1.890 -1.119 D 82 80 3 83 3 0 18 153 238 -11.551 -1.585 -0.585 IL 83 83 3 83 3 2 22 156 241 -4.173 -0.083 -11.817 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - G - - - ML 84 83 3 86 3 1 21 155 240 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 85 83 3 86 3 0 17 152 237 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 23 161 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - U - - - ML 87 86 3 89 3 1 21 154 239 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 88 86 3 89 3 0 16 150 236 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 22 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - A - - - ML 90 89 3 92 3 1 20 152 237 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 91 89 3 92 3 0 15 149 234 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 22 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 93 92 3 95 3 1 19 151 236 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 94 92 3 95 3 0 15 148 233 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 21 157 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - U - - - ML 96 95 3 98 3 1 18 150 235 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 97 95 3 98 3 0 14 146 231 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 20 156 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 99 98 3 101 3 1 18 148 233 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 100 98 3 101 3 0 13 145 230 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 19 154 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - G - - - ML 102 101 3 104 3 1 17 147 232 -5.469 -0.067 -5.469 -0.927 -1.290 1.223 -0.453 D 103 101 3 104 3 0 13 144 228 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 19 153 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - C - - - ML 105 104 3 107 3 1 16 146 230 -5.469 -0.067 -5.469 -1.302 1.345 -0.993 -0.860 D 106 104 3 107 3 0 12 142 227 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 18 152 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - C - - - ML 108 107 3 110 3 1 16 144 229 -5.469 -0.067 -5.469 -1.287 1.247 -1.468 -0.225 D 109 107 3 110 3 0 11 141 225 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 17 151 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 111 110 3 113 3 1 15 143 227 -5.469 -0.067 -5.469 -0.461 -1.632 1.347 -1.294 D 112 110 3 113 3 0 10 140 224 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 17 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - G - - - ML 114 113 3 116 3 1 14 142 226 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 115 113 3 116 3 0 10 138 222 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 16 148 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - U - - - ML 117 116 3 119 3 1 14 140 224 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 118 116 3 119 3 0 9 137 221 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 15 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - G - - - ML 120 119 3 122 3 1 13 139 223 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 121 119 3 122 3 0 8 136 219 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 15 145 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - U - - - ML 123 122 3 125 3 1 12 138 221 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 124 122 3 125 3 0 8 134 218 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 14 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - A - - - ML 126 125 3 128 3 1 12 136 220 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 127 125 3 128 3 0 7 133 216 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 13 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - A - - - ML 129 128 3 131 3 1 11 135 218 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 130 128 3 131 3 0 7 132 215 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 13 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - C - - - ML 132 131 3 134 3 1 10 133 217 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 133 131 3 134 3 0 6 130 213 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 12 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - U - - - ML 135 134 3 137 3 1 10 132 215 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 136 134 3 137 3 0 5 129 212 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 11 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - C - - - ML 138 137 3 140 3 1 9 131 214 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 139 137 3 140 3 0 5 127 210 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 11 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - A - - - ML 141 140 3 143 3 1 9 129 212 -5.469 -0.067 -5.469 1.640 -1.940 -1.678 -1.686 D 142 140 3 143 3 0 4 126 208 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 10 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - U - - - ML 144 143 3 146 3 1 8 128 210 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 145 143 3 146 3 0 4 125 207 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 10 134 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 147 146 3 149 3 1 7 127 209 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 148 146 3 149 3 0 3 123 205 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 9 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - U - - - ML 150 149 3 152 3 1 7 125 207 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 151 149 3 152 3 0 2 122 204 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 8 132 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - U - - - ML 153 152 3 155 3 1 6 124 206 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 154 152 3 155 3 0 2 121 202 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 8 130 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - G - - - ML 156 155 3 158 3 1 6 122 204 -5.469 -0.067 -5.469 -0.528 -0.614 1.044 -0.760 D 157 155 3 158 3 0 1 119 201 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 7 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - G - - - ML 159 158 3 161 3 1 5 121 203 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 160 158 3 161 3 0 1 118 199 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 7 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - C - - - ML 162 161 3 164 3 1 5 120 201 -5.469 -0.067 -5.469 -1.706 1.567 -1.890 -1.119 D 163 161 3 164 3 0 1 116 197 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 6 126 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - U - - - ML 165 164 3 167 3 1 4 118 199 -5.469 -0.067 -5.469 -1.476 -1.181 -1.625 1.524 D 166 164 3 167 3 0 0 115 196 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 6 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 168 167 3 170 3 1 4 117 198 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 169 167 3 170 3 0 0 114 194 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 5 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - G - - - ML 171 170 3 173 3 1 3 115 196 -5.469 -0.067 -5.469 -0.881 -1.865 1.506 -1.546 D 172 170 3 173 3 0 0 112 193 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 4 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - G - - - ML 174 173 3 176 3 1 3 114 195 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 175 173 3 176 3 0 0 111 191 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 4 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - G - - - ML 177 176 3 179 3 1 2 113 193 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 178 176 3 179 3 0 0 109 189 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 3 119 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - G - - - ML 180 179 3 182 3 1 1 111 191 -5.469 -0.175 -3.451 -0.927 -0.632 1.210 -0.956 D 181 179 3 182 3 0 0 108 188 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 3 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - G - - - ML 183 182 3 185 3 1 2 110 190 -5.366 -0.072 -5.366 -0.350 -1.443 1.252 -1.103 D 184 182 3 185 3 0 0 106 186 -12.563 -1.371 -0.706 IL 185 185 3 185 3 1 3 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - C - - - ML 186 185 3 188 3 1 2 108 188 -5.412 -0.069 -5.412 -1.592 1.527 -1.767 -1.023 D 187 185 3 188 3 0 0 104 183 -12.202 -2.236 -0.345 IL 188 188 3 188 3 1 3 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - C - - - ML 189 188 3 191 3 1 1 107 187 -5.412 -0.069 -5.412 -1.592 1.527 -1.767 -1.023 D 190 188 3 191 3 0 0 102 182 -12.202 -2.236 -0.345 IL 191 191 3 191 3 1 3 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - U - - - ML 192 191 3 194 3 1 1 106 185 -5.412 -0.069 -5.412 -0.986 -0.171 -1.145 1.107 D 193 191 3 194 3 0 0 101 180 -12.202 -2.236 -0.345 IL 194 194 3 194 3 1 2 112 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - C - - - ML 195 194 3 197 3 1 1 104 183 -5.412 -0.069 -5.412 -1.152 1.137 -1.324 -0.071 D 196 194 3 197 3 0 0 99 178 -12.202 -2.236 -0.345 IL 197 197 3 197 3 1 2 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - C - - - ML 198 197 3 200 3 1 1 103 182 -5.412 -0.069 -5.412 -1.592 1.527 -1.767 -1.023 D 199 197 3 200 3 0 0 98 177 -12.202 -2.236 -0.345 IL 200 200 3 200 3 1 2 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - C - - - ML 201 200 3 203 3 1 1 101 180 -5.412 -0.069 -5.412 -1.171 1.163 -1.344 -0.116 D 202 200 3 203 3 0 0 97 175 -12.202 -2.236 -0.345 IL 203 203 3 203 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 69 - G - - - ML 204 203 3 206 3 1 1 100 178 -2.389 -0.348 -5.412 -0.904 -0.720 1.226 -0.946 D 205 203 3 206 3 0 0 95 173 -12.202 -2.236 -0.345 IL 206 206 3 206 3 1 2 100 179 -1.139 -0.874 -13.686 0.000 0.000 0.000 0.000 [ MATL 69 ] 72 - G - - - ML 207 206 3 209 3 1 1 98 177 -5.412 -0.069 -5.412 -1.479 -2.125 1.647 -1.837 D 208 206 3 209 3 0 0 94 172 -12.202 -2.236 -0.345 IL 209 209 3 209 3 1 2 105 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 73 - c - - - ML 210 209 3 212 3 1 1 97 175 -5.412 -0.069 -5.412 -0.092 0.737 -0.856 -0.246 D 211 209 3 212 3 0 0 92 170 -12.202 -2.236 -0.345 IL 212 212 3 212 3 1 2 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 74 - G - - - ML 213 212 3 215 3 1 1 95 173 -5.412 -0.069 -5.412 -0.864 -0.559 1.152 -0.865 D 214 212 3 215 3 0 0 91 168 -12.202 -2.236 -0.345 IL 215 215 3 215 3 1 1 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 75 - C - - - ML 216 215 3 218 3 1 1 94 172 -5.412 -0.069 -5.412 -1.592 1.527 -1.767 -1.023 D 217 215 3 218 3 0 0 89 167 -12.202 -2.236 -0.345 IL 218 218 3 218 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 76 - G - - - ML 219 218 3 221 3 1 1 92 170 -5.412 -0.114 -4.259 -0.735 -1.710 1.439 -1.386 D 220 218 3 221 3 0 0 88 165 -12.202 -2.236 -0.345 IL 221 221 3 221 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 77 - C - - - ML 222 221 3 224 3 1 1 91 168 -5.370 -0.200 -3.251 -1.509 1.495 -1.678 -0.953 D 223 221 3 224 3 0 0 87 163 -12.536 -2.570 -0.266 IL 224 224 3 224 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 78 - g - - - ML 225 224 3 227 3 1 1 89 166 -5.249 -0.078 -5.249 -0.345 -0.552 0.687 -0.119 D 226 224 3 227 3 0 0 86 163 -13.180 -2.061 -0.396 IL 227 227 3 227 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 79 - G - - - ML 228 227 3 230 3 1 1 88 164 -5.294 -0.075 -5.294 -0.678 -1.529 1.376 -1.207 D 229 227 3 230 3 0 0 85 162 -12.976 -0.412 -2.010 IL 230 230 3 230 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 80 - c - - - ML 231 230 3 233 3 1 1 86 162 -5.469 -0.067 -5.469 -0.282 0.920 -1.004 -0.345 D 232 230 3 233 3 0 0 82 158 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 93 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 81 - G - - - ML 234 233 3 236 3 1 1 84 161 -5.469 -0.067 -5.469 -0.481 -1.028 1.181 -0.928 D 235 233 3 236 3 0 0 81 156 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 82 - A - - - ML 237 236 3 239 3 1 1 83 159 -5.469 -0.067 -5.469 1.111 -1.232 -0.189 -0.896 D 238 236 3 239 3 0 0 79 155 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 83 - G - - - ML 240 239 3 242 3 1 1 81 157 -5.469 -0.067 -5.469 -0.092 -1.431 1.150 -1.082 D 241 239 3 242 3 0 0 78 153 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 84 - G - - - ML 243 242 3 245 3 1 1 79 155 -5.469 -0.115 -4.206 -0.869 -0.375 1.084 -0.834 D 244 242 3 245 3 0 0 76 151 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 87 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 85 - c - - - ML 246 245 3 248 3 1 1 78 153 -5.423 -0.069 -5.423 -0.408 0.602 -0.037 -0.408 D 247 245 3 248 3 0 0 75 149 -12.104 -0.875 -1.138 IL 248 248 3 248 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 86 - u - - - ML 249 248 3 251 3 1 1 76 151 -5.469 -0.067 -5.469 -0.487 0.012 -0.884 0.796 D 250 248 3 251 3 0 0 72 146 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 84 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 87 - G - - - ML 252 251 3 254 3 1 1 74 149 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 253 251 3 254 3 0 0 70 144 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 88 - G - - - ML 255 254 3 257 3 1 1 73 147 -5.469 -0.067 -5.469 -0.746 -0.834 1.031 -0.323 D 256 254 3 257 3 0 0 69 142 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 89 - G - - - ML 258 257 3 260 3 1 1 71 144 -5.469 -0.067 -5.469 -1.568 -2.251 1.676 -1.964 D 259 257 3 260 3 0 0 67 140 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 90 - g - - - ML 261 260 3 263 3 1 1 69 142 -5.469 -0.067 -5.469 -0.320 -0.838 0.960 -0.527 D 262 260 3 263 3 0 0 65 137 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 91 - u - - - ML 264 263 3 266 3 1 1 67 140 -5.469 -0.067 -5.469 -0.634 -0.134 -0.350 0.731 D 265 263 3 266 3 0 0 63 135 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 92 - G - - - ML 267 266 3 269 3 1 1 65 138 -5.469 -0.067 -5.469 -0.385 -0.997 1.130 -0.878 D 268 266 3 269 3 0 0 61 132 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 93 - c - - - ML 270 269 3 272 3 1 1 63 135 -5.469 -0.067 -5.469 -0.754 0.778 -0.354 -0.136 D 271 269 3 272 3 0 0 58 130 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 94 - G - - - ML 273 272 3 275 3 1 1 61 132 -5.469 -0.067 -5.469 -0.221 -1.120 1.003 -0.562 D 274 272 3 275 3 0 0 56 127 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 95 - C - - - ML 276 275 3 278 3 1 1 58 130 -5.469 -0.067 -5.469 -1.433 1.390 -1.622 -0.547 D 277 275 3 278 3 0 0 53 123 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 96 - C - - - ML 279 278 3 281 3 1 1 56 126 -5.469 -0.067 -5.469 -1.388 1.350 -1.575 -0.449 D 280 278 3 281 3 0 0 50 119 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 66 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 97 - C - - - ML 282 281 3 284 3 1 1 53 123 -5.469 -0.067 -5.469 -1.246 1.198 -1.425 -0.132 D 283 281 3 284 3 0 0 45 114 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 98 - c - - - ML 285 284 3 287 3 1 1 49 118 -5.469 -0.186 -3.350 -0.368 0.447 -0.317 0.083 D 286 284 3 287 3 0 0 32 101 -11.551 -1.585 -0.585 IL 287 287 3 287 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 96 ] 99 - g - - - ML 288 287 3 290 2 1 1 1 1 * 0.000 -0.333 0.099 0.219 -0.042 D 289 287 3 290 2 0 0 0 0 * 0.000 IL 290 290 3 290 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 97 ] - - - - - - E 291 290 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME HOXA11-AS1_1 ACC RF02137 DESC HOXA11 antisense RNA 1 conserved region 1 LENG 96 MAXL 189 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 19:49:46 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 15 EFFN 2.230225 STATS LOCAL MSV -8.8916 0.71834 STATS LOCAL VITERBI -10.1312 0.71834 STATS LOCAL FORWARD -3.3494 0.71834 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.60244 1.30680 1.20659 1.47536 1.38629 1.38629 1.38629 1.38629 0.02783 4.89790 3.91273 0.39730 1.11515 0.00000 * 1 1.81906 2.11774 0.52405 2.07621 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 2 1.97958 1.99170 1.62997 0.63587 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 3 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 4 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 5 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 6 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 7 2.24966 0.55623 2.37418 1.47794 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 8 2.10684 2.11027 0.43631 2.20042 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 9 1.94313 2.64908 0.36007 2.42583 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 10 1.93117 1.59385 1.85572 0.70211 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 11 1.70586 2.51766 0.45285 2.28352 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 12 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 13 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 14 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 15 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 16 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 17 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 18 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 19 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 20 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 21 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 22 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 23 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 24 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 25 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 26 0.85318 1.92528 1.64695 1.44617 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 27 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.12861 2.32170 3.79104 0.05705 2.89214 1.09861 0.40547 28 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 29 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 30 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 31 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 32 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 33 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 34 2.02853 2.28070 0.53843 1.70049 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 35 2.28862 0.45367 2.07493 1.98242 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 36 2.27803 0.52217 2.40402 1.54211 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 37 1.70586 2.51766 0.45285 2.28352 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 38 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 39 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 40 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 41 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 42 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 43 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 44 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 45 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 46 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 47 0.24972 2.73092 2.54921 2.55521 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 48 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 49 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 50 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 51 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 52 1.75238 1.81161 0.66233 1.91326 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 53 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 54 2.56887 0.30006 2.69611 2.16163 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 55 2.40914 2.20508 2.51262 0.33016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 56 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 57 1.99674 2.67876 0.34251 2.45824 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 58 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 59 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 60 2.02910 1.82402 0.54769 2.04882 - G - - : 1.38629 1.38629 1.38629 1.38629 0.12106 3.79104 2.39202 1.46634 0.26236 1.09861 0.40547 61 1.62905 2.38618 0.51834 2.15077 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04970 3.71968 3.71968 1.46634 0.26236 0.95002 0.48895 62 2.48995 0.32769 2.61133 2.09505 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 63 2.48995 0.32769 2.61132 2.09505 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 64 2.06988 1.50455 2.17965 0.61878 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 65 2.18476 0.59837 2.30401 1.43577 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 66 2.48995 0.32769 2.61132 2.09505 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 67 2.19784 0.58030 2.31770 1.46652 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 68 2.01317 1.88537 0.53634 2.04193 - G - - : 1.38629 1.38629 1.38629 1.38629 0.24132 1.65582 3.75165 0.60558 0.78912 1.54990 0.23860 69 2.41119 2.85929 0.24462 2.65958 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 70 1.45012 0.87569 1.97987 1.55686 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 71 1.98517 1.77373 0.58753 1.98599 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 72 2.48995 0.32769 2.61132 2.09505 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04810 3.75165 3.75165 1.46634 0.26236 1.54990 0.23860 73 1.89580 2.57137 0.38901 2.34713 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07875 3.75165 2.95180 1.46634 0.26236 1.54990 0.23860 74 2.43252 0.34973 2.54930 2.04661 - C - - : 1.38629 1.38629 1.38629 1.38629 0.13839 3.72246 2.25312 1.46634 0.26236 1.78107 0.18447 75 1.62518 1.76913 0.91037 1.46852 - g - - : 1.38629 1.38629 1.38629 1.38629 0.05404 3.63810 3.63810 1.46634 0.26236 1.42829 0.27407 76 1.85620 2.44582 0.43264 2.22298 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05231 3.66982 3.66982 1.46634 0.26236 0.28531 1.39344 77 1.58179 0.74865 2.08251 1.62571 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 78 1.71979 2.09865 0.56761 2.02952 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 79 0.61628 2.24028 1.51741 2.00736 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 80 1.45037 2.37825 0.58938 2.13594 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 81 1.98874 1.64634 0.63469 1.96411 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07985 3.79104 2.91552 1.46634 0.26236 1.09861 0.40547 82 1.66887 0.96900 1.41190 1.66920 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04774 3.75892 3.75892 1.46634 0.26236 0.60612 0.78848 83 1.72369 1.37815 1.99925 0.83445 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 84 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 85 1.90369 1.96407 0.67172 1.61011 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 86 2.47346 2.94654 0.22424 2.74787 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 87 1.60840 1.96748 0.72054 1.75161 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 88 1.82557 1.47926 1.62918 0.87953 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 89 1.65282 2.07708 0.60296 1.99504 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 90 1.90862 0.84721 1.63184 1.48045 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 91 1.53964 2.16297 0.69078 1.77565 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 92 2.37991 0.42302 2.51047 1.76523 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 93 2.34857 0.45034 2.47791 1.69738 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 94 2.24966 0.55623 2.37418 1.47794 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04620 3.79104 3.79104 1.46634 0.26236 1.09861 0.40547 95 1.64157 1.07628 1.60634 1.32862 - c - - : 1.38629 1.38629 1.38629 1.38629 0.12861 3.79104 2.32170 1.46634 0.26236 1.09861 0.40547 96 1.61696 1.31780 1.23438 1.41569 - g - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //