# STOCKHOLM 1.0
#=GF ID FMR1-AS1_1
#=GF AC RF02117
#=GF DE FMR1 antisense RNA 1 conserved region 1
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 40.0
#=GF NC 37.3
#=GF TC 42.2
#=GF SE Predicted; CMfinder; Eberhardt R
#=GF SS Predicted; CMfinder;
#=GF TP Gene; lncRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 21.58 -Z 2958934 CM SEQDB
#=GF DR SO; 0001463; lincRNA;
#=GF DR GO; 0043066; negative regulation of apoptotic process;
#=GF RN [1]
#=GF RM 17921506
#=GF RT An antisense transcript spanning the CGG repeat region of FMR1 is
#=GF RT upregulated in premutation carriers but silenced in full mutation
#=GF RT individuals.
#=GF RA Ladd PD, Smith LE, Rabaia NA, Moore JM, Georges SA, Hansen RS, Hagerman
#=GF RA RJ, Tassone F, Tapscott SJ, Filippova GN
#=GF RL Hum Mol Genet. 2007;16:3174-3187.
#=GF RN [2]
#=GF RM 18213394
#=GF RT A novel RNA transcript with antiapoptotic function is silenced in fragile
#=GF RT X syndrome.
#=GF RA Khalil AM, Faghihi MA, Modarresi F, Brothers SP, Wahlestedt C
#=GF RL PLoS One. 2008;3:e1486.
#=GF WK FMR1-AS1_gene
#=GF SQ 20

EU251067.1/765-710           UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
L29074.1/12293-12348         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
S76590.1/130-185             UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU251068.1/661-606           UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU251065.1/1307-1252         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU048202.1/1404-1349         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU048200.1/1946-1891         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU048204.1/1862-1807         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU048203.1/1300-1245         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU251066.1/925-870           UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
EU048201.1/1564-1509         UAGUCCAAAAGGUCUUUCCUGUUUGCUAUGGCCUUGAGGAAUGUGGCCCUAGAUCC
AAPY01387897.1/898-953       UAGUCCAAUGGGUCAUUCCUGUUUACUAUGGCCUCAAGGAAUGUGGCCCUUGACCC
ABRR01160656.1/1096-1151     UAGUUCAAUAGGUCAUUCCUGUUUACCGUGGCCUCAAGGAAUGUGGCCCUUGAUCU
AAHX01006829.1/49696-49641   UAGUUCAAUGGGUCAUUUCUGUUUACUAUAGCCUCAAGGAAUAUGGCCCUUGAUCC
ABDC01376791.1/857-912       UAAUCCAAUGGGUCACUCCUGUUUACUAUGACCUUAAGGAAUGUGACCCUUGAUCU
ABRP01270137.1/1706-1761     UAGUCCAAAGGGUCAUCCCUGUUUACUGGGGCCUCAAGGAAUGUGACCCUUGAUCU
ACBE01510376.1/2136-2191     UAUUCCAAUGGGUCACUCCUGUGUACUGUGGCCUCAAGGAAUGUGGCCCUCGAUCC
AAKN02048760.1/1433-1378     UAAUCCAAUGGGUCACUUCUGUUUACUAUGGUCUCAAGGAUUGUAGUCCUUGACCC
AAEX03027029.1/301027-301082 UAUUCCAAUGGUUCAUUUUUGUGUACUGUGGCCUCAAGGAAUGUGGCCUUUGAUCC
AAPE02015618.1/29221-29166   UAGUCCAAUAAGUCAUUCUUAUUUACUGUGGCCUCAAGGAAUGUGACCCUUGGUCU
#=GC SS_cons                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#=GC RF                      UAGUCCAAugGGUCaUUCCUGUUUaCUAUGGCCUcaAGGAAUGUGGCCCUuGAUCC
//
