INFERNAL1/a [1.1.5 | Sep 2023] NAME DLEU2_4 ACC RF02108 DESC Deleted in lymphocytic leukemia 2 conserved region 4 STATES 178 NODES 60 CLEN 58 W 128 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 01:06:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02108/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 21 EFFN 6.503540 CKSUM 2744231131 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 40.20 NC 39.60 EFP7GF -13.9451 0.71898 ECMLC 0.59782 -9.73871 1.07055 1600000 768387 0.001562 ECMGC 0.38173 -17.63384 -2.36666 1600000 135860 0.002944 ECMLI 0.56831 -8.43098 1.93168 1600000 433341 0.002769 ECMGI 0.42245 -11.37992 1.57526 1600000 95264 0.004199 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 128 207 -8.149 -8.356 -0.023 -6.770 IL 1 1 2 1 4 1 22 131 209 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 130 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 21 129 208 -6.444 -0.034 -6.444 -2.322 0.380 -2.541 1.219 D 4 2 3 5 3 0 16 126 204 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 23 136 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 20 127 206 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 7 5 3 8 3 0 15 124 203 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 22 135 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 20 126 205 -6.444 -0.034 -6.444 -1.087 -1.765 1.502 -1.315 D 10 8 3 11 3 0 15 123 202 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 21 133 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 1 19 125 203 -6.444 -0.034 -6.444 -1.125 1.293 -2.090 -0.223 D 13 11 3 14 3 0 14 122 200 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 20 132 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 18 124 202 -6.444 -0.034 -6.444 -0.767 -2.027 -2.385 1.573 D 16 14 3 17 3 0 13 121 199 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 20 131 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 17 122 201 -6.444 -0.034 -6.444 -0.665 -3.114 1.636 -2.780 D 19 17 3 20 3 0 13 119 198 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 19 130 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - g - - - ML 21 20 3 23 3 1 16 121 199 -6.444 -0.034 -6.444 0.138 -1.626 0.937 -0.597 D 22 20 3 23 3 0 12 118 196 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 18 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 16 120 198 -4.231 -0.097 -6.444 -0.674 -2.089 1.375 -0.878 D 25 23 3 26 3 0 11 117 195 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 16 120 198 -4.284 -0.076 -11.928 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - C - - - ML 27 26 3 29 3 1 15 119 197 -6.444 -0.034 -6.444 -2.142 1.424 -1.700 -0.355 D 28 26 3 29 3 0 11 116 194 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 16 126 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 30 29 3 32 3 1 14 118 195 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 31 29 3 32 3 0 10 115 192 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 15 125 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - A - - - ML 33 32 3 35 3 1 13 116 194 -6.444 -0.078 -4.603 1.738 -2.639 -2.882 -1.441 D 34 32 3 35 3 0 9 114 191 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 15 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - A - - - ML 36 35 3 38 3 1 12 115 193 -6.400 -0.035 -6.400 1.718 -1.458 -2.790 -2.308 D 37 35 3 38 3 0 9 113 190 -12.447 -0.640 -1.481 IL 38 38 3 38 3 1 14 123 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - G - - - ML 39 38 3 41 3 1 11 114 191 -6.444 -0.034 -6.444 -0.938 -3.231 1.695 -2.903 D 40 38 3 41 3 0 7 111 188 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 13 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 42 41 3 44 3 1 11 112 190 -6.444 -0.034 -6.444 -2.758 -1.113 -3.008 1.707 D 43 41 3 44 3 0 6 110 187 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 12 120 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 45 44 3 47 3 1 10 111 188 -6.444 -0.084 -4.479 1.482 -1.844 -1.195 -1.026 D 46 44 3 47 3 0 6 109 186 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 11 119 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - G - - - ML 48 47 3 50 3 1 9 110 187 -6.395 -0.035 -6.395 -0.723 -1.543 1.482 -1.952 D 49 47 3 50 3 0 5 108 185 -12.528 -0.597 -1.562 IL 50 50 3 50 3 1 10 118 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - G - - - ML 51 50 3 53 3 1 8 109 186 -6.444 -0.034 -6.444 0.262 -2.677 1.290 -2.328 D 52 50 3 53 3 0 4 106 182 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 10 116 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 1 7 107 184 -6.444 -0.034 -6.444 -0.848 -3.193 1.677 -2.862 D 55 53 3 56 3 0 3 104 181 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 9 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - G - - - ML 57 56 3 59 3 1 7 106 183 -6.444 -0.034 -6.444 -3.037 -4.238 1.911 -3.967 D 58 56 3 59 3 0 3 103 180 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 8 114 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - G - - - ML 60 59 3 62 3 1 6 105 181 -4.498 -0.147 -4.252 -0.658 -1.778 1.189 -0.332 D 61 59 3 62 3 0 2 102 179 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 7 105 181 -3.960 -0.096 -11.604 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - C - - - ML 63 62 3 65 3 1 6 104 180 -6.383 -0.035 -6.383 -2.817 1.621 -3.089 -0.591 D 64 62 3 65 3 0 1 102 178 -12.682 -0.524 -1.716 IL 65 65 3 65 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - U - - - ML 66 65 3 68 3 1 5 102 179 -3.501 -0.152 -6.444 -2.753 -1.097 -3.002 1.705 D 67 65 3 68 3 0 0 99 176 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 6 102 179 -5.118 -0.042 -12.762 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - g - - - ML 69 68 3 71 3 1 5 101 178 -6.444 -0.034 -6.444 -0.720 -0.301 0.843 -0.345 D 70 68 3 71 3 0 0 98 174 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 6 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - U - - - ML 72 71 3 74 3 1 4 100 176 -6.444 -0.034 -6.444 -1.797 -1.074 -1.152 1.479 D 73 71 3 74 3 0 0 97 173 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 5 108 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - U - - - ML 75 74 3 77 3 1 4 99 175 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 76 74 3 77 3 0 0 96 171 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 5 107 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - U - - - ML 78 77 3 80 3 1 3 97 173 -6.444 -0.034 -6.444 -0.709 -0.731 -1.745 1.315 D 79 77 3 80 3 0 0 94 170 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 4 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - U - - - ML 81 80 3 83 3 1 3 96 172 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 82 80 3 83 3 0 0 93 168 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 4 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 31 - A - - - ML 84 83 3 86 3 1 2 95 170 -6.444 -0.034 -6.444 1.601 -2.262 -2.483 -0.789 D 85 83 3 86 3 0 0 91 167 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 3 103 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 32 - U - - - ML 87 86 3 89 3 1 2 93 169 -6.444 -0.034 -6.444 -1.101 -1.127 -2.094 1.507 D 88 86 3 89 3 0 0 90 165 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 3 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - U - - - ML 90 89 3 92 3 1 2 92 167 -6.444 -0.034 -6.444 -2.752 -1.095 -3.001 1.704 D 91 89 3 92 3 0 0 89 164 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 3 100 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - A - - - ML 93 92 3 95 3 1 1 91 166 -6.444 -0.034 -6.444 1.526 -2.716 -0.364 -2.388 D 94 92 3 95 3 0 0 87 162 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 99 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - U - - - ML 96 95 3 98 3 1 1 89 164 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 97 95 3 98 3 0 0 86 161 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 2 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - G - - - ML 99 98 3 101 3 1 1 88 163 -6.444 -0.034 -6.444 -1.983 -2.771 1.659 -1.178 D 100 98 3 101 3 0 0 85 159 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 2 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - G - - - ML 102 101 3 104 3 1 1 86 161 -6.444 -0.034 -6.444 -0.546 -1.551 1.439 -1.924 D 103 101 3 104 3 0 0 83 158 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - U - - - ML 105 104 3 107 3 1 1 85 160 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 106 104 3 107 3 0 0 82 156 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 94 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - C - - - ML 108 107 3 110 3 1 1 84 158 -6.444 -0.034 -6.444 -3.598 1.888 -3.863 -2.770 D 109 107 3 110 3 0 0 80 154 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - U - - - ML 111 110 3 113 3 1 1 82 156 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 112 110 3 113 3 0 0 79 153 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 91 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - U - - - ML 114 113 3 116 3 1 1 81 155 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 115 113 3 116 3 0 0 78 151 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 90 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - C - - - ML 117 116 3 119 3 1 1 79 153 -6.444 -0.034 -6.444 -3.228 1.786 -3.537 -1.475 D 118 116 3 119 3 0 0 76 150 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - A - - - ML 120 119 3 122 3 1 1 78 152 -6.444 -0.034 -6.444 1.939 -4.404 -3.929 -4.228 D 121 119 3 122 3 0 0 75 148 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 87 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - U - - - ML 123 122 3 125 3 1 1 76 150 -6.444 -0.034 -6.444 -3.454 -2.838 -3.659 1.883 D 124 122 3 125 3 0 0 74 147 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 126 125 3 128 3 1 1 75 148 -6.444 -0.110 -4.013 -2.862 -1.386 -3.118 1.750 D 127 125 3 128 3 0 0 72 145 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 84 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - U - - - ML 129 128 3 131 3 1 1 74 147 -4.224 -0.098 -6.369 -2.199 0.349 -2.412 1.214 D 130 128 3 131 3 0 0 72 145 -12.852 -0.455 -1.886 IL 131 131 3 131 3 1 1 74 147 -4.203 -0.081 -11.847 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - U - - - ML 132 131 3 134 3 1 1 72 145 -6.444 -0.034 -6.444 -2.802 -1.229 -3.055 1.727 D 133 131 3 134 3 0 0 69 142 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - A - - - ML 135 134 3 137 3 1 1 71 144 -6.444 -0.034 -6.444 1.672 -3.016 -0.900 -2.709 D 136 134 3 137 3 0 0 67 140 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - U - - - ML 138 137 3 140 3 1 1 69 142 -6.444 -0.034 -6.444 -2.584 -0.633 -2.821 1.607 D 139 137 3 140 3 0 0 66 138 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - C - - - ML 141 140 3 143 3 1 1 68 140 -6.444 -0.034 -6.444 -2.513 1.271 -2.748 0.336 D 142 140 3 143 3 0 0 64 136 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - A - - - ML 144 143 3 146 3 1 1 66 138 -6.444 -0.034 -6.444 1.109 -2.418 0.503 -2.069 D 145 143 3 146 3 0 0 62 134 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - U - - - ML 147 146 3 149 3 1 1 65 136 -6.444 -0.034 -6.444 -1.337 -1.006 -2.189 1.530 D 148 146 3 149 3 0 0 61 132 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 75 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - U - - - ML 150 149 3 152 3 1 1 63 134 -6.444 -0.090 -4.345 -3.454 -2.838 -3.659 1.883 D 151 149 3 152 3 0 0 58 130 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - A - - - ML 153 152 3 155 3 1 1 61 133 -6.388 -0.035 -6.388 1.933 -4.274 -3.824 -4.096 D 154 152 3 155 3 0 0 56 126 -12.618 -2.652 -0.250 IL 155 155 3 155 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - U - - - ML 156 155 3 158 3 1 1 59 130 -6.388 -0.035 -6.388 -2.381 -0.308 -2.607 1.504 D 157 155 3 158 3 0 0 54 124 -12.618 -2.652 -0.250 IL 158 158 3 158 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - U - - - ML 159 158 3 161 3 1 1 57 128 -6.388 -0.035 -6.388 -0.796 -1.964 -2.320 1.569 D 160 158 3 161 3 0 0 53 123 -12.618 -2.652 -0.250 IL 161 161 3 161 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - A - - - ML 162 161 3 164 3 1 1 55 126 -6.388 -0.035 -6.388 1.660 -1.163 -2.617 -2.122 D 163 161 3 164 3 0 0 52 122 -12.618 -0.553 -1.652 IL 164 164 3 164 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - A - - - ML 165 164 3 167 3 1 1 53 123 -6.444 -0.034 -6.444 1.805 -3.474 -1.699 -3.206 D 166 164 3 167 3 0 0 47 117 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - A - - - ML 168 167 3 170 3 1 1 50 120 -6.444 -0.034 -6.444 1.085 -0.514 -0.535 -1.034 D 169 167 3 170 3 0 0 43 112 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - C - - - ML 171 170 3 173 3 1 1 46 115 -6.444 -0.034 -6.444 -1.806 1.272 -1.189 -0.217 D 172 170 3 173 3 0 0 32 101 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - C - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -2.893 1.615 -3.167 -0.532 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 59 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DLEU2_4 ACC RF02108 DESC Deleted in lymphocytic leukemia 2 conserved region 4 LENG 58 MAXL 128 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Mon Jul 8 01:06:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02108/CM NSEQ 21 EFFN 6.503540 CKSUM 2744231131 STATS LOCAL MSV -7.4673 0.71898 STATS LOCAL VITERBI -8.1987 0.71898 STATS LOCAL FORWARD -3.7382 0.71898 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.48944 1.73716 1.59886 0.92544 1.38629 1.38629 1.38629 1.38629 0.01304 5.64846 4.66329 0.39730 1.11515 0.00000 * 1 2.99603 1.12323 3.14729 0.54160 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 2 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 3 2.13956 2.60983 0.34496 2.29760 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 4 2.16643 0.49018 2.83497 1.54095 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 5 1.91780 2.79129 3.03919 0.29591 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 6 1.84704 3.54493 0.25229 3.31295 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 7 1.29083 2.51318 0.73673 1.80018 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 8 1.85375 2.83403 0.43308 1.99462 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06695 2.93245 4.46631 0.05270 2.96940 1.09861 0.40547 9 2.87080 0.39908 2.56484 1.63232 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 10 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 11 0.18168 3.21523 3.38398 2.38520 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05409 4.46632 3.19026 1.46634 0.26236 1.09861 0.40547 12 0.19560 2.39666 3.31994 2.98605 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02397 4.43619 4.43619 1.46634 0.26236 0.44358 1.02649 13 2.03675 3.62595 0.21134 3.39842 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 14 3.29827 2.15744 3.47157 0.20290 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 15 0.35904 2.66417 2.21426 2.09752 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05799 4.46631 3.10438 1.46634 0.26236 1.09861 0.40547 16 1.88753 2.45592 0.35934 2.73908 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02406 4.43238 4.43238 1.46634 0.26236 0.41365 1.08244 17 1.20478 3.24206 0.49205 2.99998 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 18 1.97408 3.59923 0.22392 3.37014 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 19 3.49151 4.32409 0.06154 4.13606 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 20 1.84238 2.61900 0.56190 1.61666 - G - - : 1.38629 1.38629 1.38629 1.38629 0.10175 3.11783 2.94715 0.06643 2.74457 1.09861 0.40547 21 3.33921 0.26244 3.52732 1.79590 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02425 4.42445 4.42445 1.46634 0.26236 0.36311 1.18913 22 3.29423 2.14664 3.46727 0.20478 - U - - : 1.38629 1.38629 1.38629 1.38629 0.10514 2.42686 4.46631 0.02921 3.54767 1.09861 0.40547 23 1.88559 1.59523 0.80168 1.62544 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 24 2.63195 2.13066 2.18454 0.36130 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 25 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 26 1.87807 1.89308 2.59583 0.47494 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 27 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 28 0.27649 2.95408 3.10710 1.93309 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 29 2.14922 2.16770 2.83747 0.34191 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 30 3.29368 2.14516 3.46667 0.20504 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 31 0.32857 3.26893 1.63877 3.04120 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 32 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 33 2.76109 3.30692 0.23619 2.20261 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 34 1.76504 2.46104 0.38918 2.72016 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 35 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 36 3.88053 0.07738 4.06425 3.30657 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 37 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 38 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 39 3.62386 0.14867 3.83795 2.40869 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 40 0.04244 4.43891 4.10992 4.31713 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 41 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 42 3.36985 2.34683 3.54720 0.17301 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07626 4.46631 2.78173 1.46634 0.26236 1.09861 0.40547 43 2.91020 1.14413 3.05849 0.54459 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06788 2.92759 4.41456 0.05582 2.91335 0.31557 1.30701 44 3.32858 2.23803 3.50376 0.18946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 45 0.22701 3.47677 2.01039 3.26385 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 46 3.17713 1.82484 3.34172 0.27223 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 47 3.12805 0.50513 3.29102 1.15343 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 48 0.61731 3.06215 1.03783 2.82016 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 49 2.31296 2.08351 2.90363 0.32612 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 50 3.78021 3.35324 3.92261 0.08075 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06263 4.46632 3.01144 1.46634 0.26236 1.09861 0.40547 51 0.04625 4.34895 4.03659 4.22523 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02417 4.42785 4.42785 1.46634 0.26236 1.83800 0.17333 52 3.03681 1.59986 3.19321 0.34383 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02417 4.42785 4.42785 1.46634 0.26236 1.83800 0.17333 53 1.93837 2.74758 2.99425 0.29853 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02417 4.42785 4.42785 1.46634 0.26236 1.83800 0.17333 54 0.23550 2.19257 3.20017 2.85706 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02417 4.42785 4.42785 1.46634 0.26236 0.38312 1.14485 55 0.13536 3.79397 2.56381 3.60886 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46632 4.46632 1.46634 0.26236 1.09861 0.40547 56 0.63431 1.74264 1.75705 2.10303 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 57 2.63800 0.50458 2.21012 1.53688 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02325 4.46631 4.46631 1.46634 0.26236 1.09861 0.40547 58 3.39187 0.26710 3.58150 1.75490 - C - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //