INFERNAL1/a [1.1.5 | Sep 2023] NAME DLEU2_3 ACC RF02107 DESC Deleted in lymphocytic leukemia 2 conserved region 3 STATES 232 NODES 78 CLEN 76 W 156 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 03:07:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02107/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 24 EFFN 4.127930 CKSUM 2145299227 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 60.60 NC 56.20 EFP7GF -9.5026 0.71863 ECMLC 0.55902 -10.72646 0.47067 1600000 627487 0.001912 ECMGC 0.36614 -15.22430 -1.07948 1600000 71000 0.005634 ECMLI 0.44348 -10.39353 2.85943 1600000 428251 0.002802 ECMGI 0.40227 -7.34678 4.70422 1600000 50981 0.007846 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 156 239 -7.648 -7.855 -0.032 -6.269 IL 1 1 2 1 4 5 34 158 241 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 34 158 241 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 5 34 156 239 -5.984 -0.046 -5.984 1.601 -1.916 -2.012 -1.140 D 4 2 3 5 3 1 29 153 236 -11.551 -1.585 -0.585 IL 5 5 3 5 3 7 35 163 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 5 33 155 238 -5.984 -0.046 -5.984 1.150 -0.881 -0.529 -0.877 D 7 5 3 8 3 1 28 152 235 -11.551 -1.585 -0.585 IL 8 8 3 8 3 6 35 161 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 4 32 154 237 -5.984 -0.046 -5.984 1.866 -3.254 -2.945 -3.045 D 10 8 3 11 3 1 28 151 233 -11.551 -1.585 -0.585 IL 11 11 3 11 3 5 34 160 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 4 31 152 235 -5.984 -0.090 -4.481 -2.362 -3.363 1.844 -3.089 D 13 11 3 14 3 0 27 149 232 -11.551 -1.585 -0.585 IL 14 14 3 14 3 6 33 159 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 4 31 151 234 -5.941 -0.048 -5.941 -1.440 1.288 -0.751 -0.750 D 16 14 3 17 3 0 26 148 230 -12.239 -2.273 -0.335 IL 17 17 3 17 3 5 33 158 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 4 30 150 233 -5.941 -0.048 -5.941 1.607 -1.911 -1.988 -1.197 D 19 17 3 20 3 0 26 147 230 -12.239 -2.273 -0.335 IL 20 20 3 20 3 5 32 156 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - g - - - ML 21 20 3 23 3 3 29 149 231 -3.456 -0.164 -5.941 -0.656 -1.221 0.898 0.101 D 22 20 3 23 3 0 26 147 229 -12.239 -0.771 -1.273 IL 23 23 3 23 3 4 30 149 231 -4.603 -0.061 -12.247 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - A - - - ML 24 23 3 26 3 3 29 148 230 -5.984 -0.046 -5.984 1.122 -0.552 -1.231 -0.484 D 25 23 3 26 3 0 24 144 227 -11.551 -1.585 -0.585 IL 26 26 3 26 3 4 30 154 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - A - - - ML 27 26 3 29 3 3 28 146 229 -5.984 -0.046 -5.984 1.394 -1.545 -1.642 -0.497 D 28 26 3 29 3 0 23 143 226 -11.551 -1.585 -0.585 IL 29 29 3 29 3 3 29 153 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 30 29 3 32 3 2 27 145 227 -5.984 -0.046 -5.984 -0.701 -1.449 -1.730 1.442 D 31 29 3 32 3 0 23 142 224 -11.551 -1.585 -0.585 IL 32 32 3 32 3 3 29 152 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - U - - - ML 33 32 3 35 3 2 26 144 226 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 34 32 3 35 3 0 22 141 223 -11.551 -1.585 -0.585 IL 35 35 3 35 3 3 28 150 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - U - - - ML 36 35 3 38 3 2 25 142 225 -5.984 -0.046 -5.984 -0.757 -0.809 -0.804 1.180 D 37 35 3 38 3 0 21 139 221 -11.551 -1.585 -0.585 IL 38 38 3 38 3 3 27 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - A - - - ML 39 38 3 41 3 1 25 141 223 -5.984 -0.046 -5.984 1.866 -3.254 -2.945 -3.045 D 40 38 3 41 3 0 21 138 220 -11.551 -1.585 -0.585 IL 41 41 3 41 3 2 26 148 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - C - - - ML 42 41 3 44 3 1 24 140 222 -5.984 -0.046 -5.984 -2.182 1.555 -2.423 -0.611 D 43 41 3 44 3 0 20 137 219 -11.551 -1.585 -0.585 IL 44 44 3 44 3 2 25 147 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 45 44 3 47 3 1 23 139 220 -5.984 -0.046 -5.984 1.717 -2.563 -1.566 -2.284 D 46 44 3 47 3 0 20 136 217 -11.551 -1.585 -0.585 IL 47 47 3 47 3 2 24 145 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 48 47 3 50 3 1 22 137 219 -5.984 -0.046 -5.984 1.562 -2.173 -0.862 -1.859 D 49 47 3 50 3 0 19 134 216 -11.551 -1.585 -0.585 IL 50 50 3 50 3 2 23 144 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 51 50 3 53 3 1 21 136 218 -5.984 -0.395 -2.159 1.650 -2.369 -1.216 -2.072 D 52 50 3 53 3 0 18 133 214 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 24 143 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - c - - - ML 54 53 3 56 3 1 22 135 217 -5.647 -0.059 -5.647 -1.261 0.933 -1.444 0.384 D 55 53 3 56 3 0 18 131 212 -13.981 -4.016 -0.092 IL 56 56 3 56 3 1 23 142 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - a - - - ML 57 56 3 59 3 1 21 134 215 -5.647 -0.059 -5.647 0.506 -0.791 -0.203 0.180 D 58 56 3 59 3 0 18 131 212 -13.981 -4.016 -0.092 IL 59 59 3 59 3 1 22 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - G - - - ML 60 59 3 62 3 1 20 133 214 -5.647 -0.059 -5.647 -0.450 -1.427 1.224 -0.836 D 61 59 3 62 3 0 18 131 212 -13.981 -0.480 -1.822 IL 62 62 3 62 3 1 22 139 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - C - - - ML 63 62 3 65 3 1 19 131 212 -5.924 -0.048 -5.924 -2.313 1.664 -2.565 -1.117 D 64 62 3 65 3 0 16 129 210 -12.445 -0.641 -1.479 IL 65 65 3 65 3 1 21 138 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 66 65 3 68 3 1 18 130 211 -5.984 -0.099 -4.301 1.266 -1.350 -0.695 -0.773 D 67 65 3 68 3 0 14 127 208 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 20 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - u - - - ML 69 68 3 71 3 1 18 129 209 -5.932 -0.048 -5.932 -0.935 -0.499 -0.357 0.992 D 70 68 3 71 3 0 14 126 206 -12.348 -2.382 -0.308 IL 71 71 3 71 3 1 19 136 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - U - - - ML 72 71 3 74 3 1 17 127 208 -5.932 -0.048 -5.932 -1.226 -0.521 -1.018 1.252 D 73 71 3 74 3 0 13 125 205 -12.348 -0.699 -1.382 IL 74 74 3 74 3 1 19 134 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - U - - - ML 75 74 3 77 3 1 16 126 206 -5.984 -0.046 -5.984 -1.854 -0.643 -2.061 1.508 D 76 74 3 77 3 0 12 123 203 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 18 133 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 16 125 205 -5.984 -0.046 -5.984 -0.705 -0.084 -1.290 1.024 D 79 77 3 80 3 0 11 122 202 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 17 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - G - - - ML 81 80 3 83 3 1 15 123 204 -5.984 -0.046 -5.984 -0.042 -1.608 1.143 -1.023 D 82 80 3 83 3 0 11 120 200 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 16 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 84 83 3 86 3 1 14 122 202 -5.984 -0.046 -5.984 -1.783 -0.446 -1.987 1.445 D 85 83 3 86 3 0 10 119 199 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 15 129 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - U - - - ML 87 86 3 89 3 1 13 121 201 -5.984 -0.046 -5.984 -2.030 -1.071 -2.244 1.617 D 88 86 3 89 3 0 10 118 198 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 14 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 90 89 3 92 3 1 12 120 199 -5.984 -0.136 -3.756 -2.340 1.644 -2.593 -0.967 D 91 89 3 92 3 0 9 117 196 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 14 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - C - - - ML 93 92 3 95 3 1 12 118 198 -5.897 -0.049 -5.897 -2.590 1.774 -2.824 -1.870 D 94 92 3 95 3 0 9 116 196 -12.707 -0.513 -1.741 IL 95 95 3 95 3 1 13 125 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - U - - - ML 96 95 3 98 3 1 11 117 196 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 97 95 3 98 3 0 7 114 193 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 12 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - U - - - ML 99 98 3 101 3 1 10 116 195 -5.984 -0.046 -5.984 -1.598 -1.504 -0.892 1.474 D 100 98 3 101 3 0 6 113 192 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 11 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - G - - - ML 102 101 3 104 3 1 9 114 193 -5.984 -0.104 -4.217 -1.633 -2.365 1.642 -1.463 D 103 101 3 104 3 0 6 112 190 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 11 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - c - - - ML 105 104 3 107 3 1 9 113 192 -5.928 -0.048 -5.928 -0.486 0.768 -1.206 0.202 D 106 104 3 107 3 0 5 111 189 -12.400 -0.667 -1.434 IL 107 107 3 107 3 1 10 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - A - - - ML 108 107 3 110 3 1 8 112 190 -5.984 -0.046 -5.984 1.049 -0.721 -0.743 -0.462 D 109 107 3 110 3 0 4 109 187 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 9 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 111 110 3 113 3 1 7 110 189 -5.984 -0.089 -4.502 -0.779 -2.522 1.596 -2.190 D 112 110 3 113 3 0 4 108 186 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 9 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 114 113 3 116 3 1 7 109 187 -5.942 -0.048 -5.942 -1.894 -0.893 -2.103 1.566 D 115 113 3 116 3 0 3 107 185 -12.227 -0.779 -1.261 IL 116 116 3 116 3 1 8 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - A - - - ML 117 116 3 119 3 1 7 108 186 -5.984 -0.046 -5.984 1.707 -2.532 -1.510 -2.250 D 118 116 3 119 3 0 2 104 182 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 8 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - C - - - ML 120 119 3 122 3 1 6 106 184 -5.984 -0.046 -5.984 -1.905 1.331 -2.122 -0.018 D 121 119 3 122 3 0 1 103 181 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 7 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 123 122 3 125 3 1 6 105 183 -5.984 -0.046 -5.984 1.716 -2.561 -1.561 -2.282 D 124 122 3 125 3 0 1 102 179 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 7 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - c - - - ML 126 125 3 128 3 1 5 104 181 -5.984 -0.046 -5.984 -1.032 0.955 -1.522 0.291 D 127 125 3 128 3 0 0 100 178 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 6 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - C - - - ML 129 128 3 131 3 1 5 102 180 -5.984 -0.046 -5.984 -2.182 1.555 -2.423 -0.611 D 130 128 3 131 3 0 0 99 176 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 6 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - U - - - ML 132 131 3 134 3 1 4 101 178 -5.984 -0.046 -5.984 -1.055 -1.561 -1.936 1.545 D 133 131 3 134 3 0 0 98 175 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 5 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - U - - - ML 135 134 3 137 3 1 4 99 177 -5.984 -0.046 -5.984 -2.027 -1.065 -2.241 1.616 D 136 134 3 137 3 0 0 96 173 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - U - - - ML 138 137 3 140 3 1 3 98 175 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 139 137 3 140 3 0 0 95 172 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 4 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - C - - - ML 141 140 3 143 3 1 2 97 173 -5.984 -0.046 -5.984 -2.764 1.800 -3.005 -2.020 D 142 140 3 143 3 0 0 94 170 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 3 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - A - - - ML 144 143 3 146 3 1 1 95 172 -5.984 -0.108 -4.146 1.866 -3.254 -2.945 -3.045 D 145 143 3 146 3 0 0 92 169 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 3 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 147 146 3 149 3 1 2 94 170 -5.924 -0.048 -5.924 1.038 -0.743 -0.701 -0.447 D 148 146 3 149 3 0 0 91 168 -12.445 -0.641 -1.479 IL 149 149 3 149 3 1 3 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - A - - - ML 150 149 3 152 3 1 1 92 169 -5.984 -0.046 -5.984 1.866 -3.254 -2.945 -3.045 D 151 149 3 152 3 0 0 89 165 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 2 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 153 152 3 155 3 1 1 91 167 -5.984 -0.046 -5.984 1.246 -0.914 -1.338 -0.510 D 154 152 3 155 3 0 0 88 163 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 2 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - G - - - ML 156 155 3 158 3 1 1 89 165 -5.984 -0.046 -5.984 -0.941 -2.608 1.637 -2.282 D 157 155 3 158 3 0 0 86 162 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 2 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - A - - - ML 159 158 3 161 3 1 1 88 164 -5.984 -0.046 -5.984 1.716 -2.559 -1.559 -2.280 D 160 158 3 161 3 0 0 85 160 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - C - - - ML 162 161 3 164 3 1 1 87 162 -5.984 -0.046 -5.984 -1.281 1.420 -1.961 -0.610 D 163 161 3 164 3 0 0 83 158 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 165 164 3 167 3 1 1 85 160 -5.984 -0.046 -5.984 1.583 -1.235 -1.982 -1.615 D 166 164 3 167 3 0 0 82 157 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - U - - - ML 168 167 3 170 3 1 1 84 159 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 169 167 3 170 3 0 0 80 155 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - C - - - ML 171 170 3 173 3 1 1 82 157 -5.984 -0.046 -5.984 -0.820 1.155 -0.934 -0.548 D 172 170 3 173 3 0 0 79 153 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - U - - - ML 174 173 3 176 3 1 1 81 155 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 175 173 3 176 3 0 0 77 151 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - U - - - ML 177 176 3 179 3 1 1 79 153 -5.984 -0.046 -5.984 -2.508 -2.035 -2.697 1.777 D 178 176 3 179 3 0 0 75 149 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - C - - - ML 180 179 3 182 3 1 1 77 152 -5.984 -0.046 -5.984 -2.340 1.644 -2.593 -0.967 D 181 179 3 182 3 0 0 74 148 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - A - - - ML 183 182 3 185 3 1 1 76 150 -5.984 -0.046 -5.984 1.866 -3.254 -2.945 -3.045 D 184 182 3 185 3 0 0 72 146 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - U - - - ML 186 185 3 188 3 1 1 74 148 -5.984 -0.046 -5.984 -1.865 -1.658 -1.382 1.597 D 187 185 3 188 3 0 0 71 144 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - C - - - ML 189 188 3 191 3 1 1 73 146 -5.984 -0.046 -5.984 -2.162 1.542 -2.401 -0.566 D 190 188 3 191 3 0 0 69 142 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - A - - - ML 192 191 3 194 3 1 1 71 144 -5.984 -0.046 -5.984 1.419 -1.577 -1.677 -0.560 D 193 191 3 194 3 0 0 67 140 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - A - - - ML 195 194 3 197 3 1 1 69 142 -5.984 -0.046 -5.984 1.662 -2.401 -1.274 -2.107 D 196 194 3 197 3 0 0 66 138 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - G - - - ML 198 197 3 200 3 1 1 68 140 -3.037 -0.279 -4.217 -0.701 -2.480 1.575 -2.146 D 199 197 3 200 3 0 0 65 137 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 68 140 -5.124 -0.042 -12.768 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - u - - - ML 201 200 3 203 3 1 1 67 139 -5.928 -0.048 -5.928 -0.632 -0.284 -0.803 0.971 D 202 200 3 203 3 0 0 64 136 -12.400 -0.667 -1.434 IL 203 203 3 203 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - A - - - ML 204 203 3 206 3 1 1 65 137 -5.984 -0.046 -5.984 1.866 -3.254 -2.945 -3.045 D 205 203 3 206 3 0 0 61 133 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - G - - - ML 207 206 3 209 3 1 1 63 135 -5.984 -0.160 -3.490 -1.619 -2.339 1.633 -1.415 D 208 206 3 209 3 0 0 59 131 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - G - - - ML 210 209 3 212 3 1 1 61 132 -5.874 -0.050 -5.874 -0.565 -1.107 1.213 -0.887 D 211 209 3 212 3 0 0 58 129 -12.898 -0.438 -1.933 IL 212 212 3 212 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - U - - - ML 213 212 3 215 3 1 1 59 130 -5.984 -0.046 -5.984 -0.635 -1.173 -0.898 1.249 D 214 212 3 215 3 0 0 54 125 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 74 - A - - - ML 216 215 3 218 3 1 1 57 127 -5.984 -0.046 -5.984 1.203 -0.175 -1.523 -1.108 D 217 215 3 218 3 0 0 51 122 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 75 - A - - - ML 219 218 3 221 3 1 1 54 124 -5.984 -0.046 -5.984 1.346 -1.436 -0.919 -0.839 D 220 218 3 221 3 0 0 48 118 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 76 - G - - - ML 222 221 3 224 3 1 1 51 121 -5.984 -0.046 -5.984 -1.523 -1.203 1.554 -1.832 D 223 221 3 224 3 0 0 44 113 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 77 - A - - - ML 225 224 3 227 3 1 1 47 117 -5.984 -0.087 -4.544 1.570 -1.843 -1.944 -1.023 D 226 224 3 227 3 0 0 32 101 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 78 - c - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 -0.304 0.638 -0.474 -0.130 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DLEU2_3 ACC RF02107 DESC Deleted in lymphocytic leukemia 2 conserved region 3 LENG 76 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 03:07:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02107/CM NSEQ 24 EFFN 4.127930 CKSUM 2145299227 STATS LOCAL MSV -8.3884 0.71863 STATS LOCAL VITERBI -9.1493 0.71863 STATS LOCAL FORWARD -3.3672 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.12358 1.54781 1.72435 1.25919 1.38629 1.38629 1.38629 1.38629 0.01851 5.30108 4.31590 0.39730 1.11515 0.00000 * 1 0.27670 2.71404 2.78099 2.17621 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 2 0.58885 1.99710 1.75323 1.99442 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 3 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 4 3.02345 3.71710 0.10794 3.52746 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06249 4.14756 3.10617 1.46634 0.26236 1.09861 0.40547 5 2.38425 0.49323 1.90705 1.90600 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03309 4.11816 4.11816 1.46634 0.26236 1.57550 0.23181 6 0.27255 2.71108 2.76427 2.21569 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03309 4.11816 4.11816 1.46634 0.26236 1.57550 0.23181 7 1.84130 2.23253 0.76358 1.31626 - g - - : 1.38629 1.38629 1.38629 1.38629 0.11360 2.39565 4.11816 0.04204 3.19018 0.53411 0.88235 8 0.60827 1.76921 2.23984 1.72168 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 9 0.41993 2.45717 2.52450 1.73085 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 10 1.87232 2.39043 2.58568 0.38669 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 11 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 12 1.91125 1.94727 1.94378 0.56867 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 13 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 14 2.89902 0.30846 3.06575 1.80958 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 15 0.19613 3.16271 2.47147 2.96955 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 16 0.30365 2.89261 1.98407 2.67454 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 17 0.24269 3.02824 2.22925 2.82219 - A - - : 1.38629 1.38629 1.38629 1.38629 0.27414 4.14756 1.49625 1.46634 0.26236 1.09861 0.40547 18 2.26027 0.73931 2.38701 1.11984 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04073 3.91416 3.91416 1.46634 0.26236 2.78331 0.06383 19 1.03549 1.93435 1.52673 1.26166 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04073 3.91416 3.91416 1.46634 0.26236 2.78331 0.06383 20 1.69812 2.37519 0.53800 1.96567 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04073 3.91416 3.91416 1.46634 0.26236 0.33244 1.26292 21 2.98985 0.23297 3.16436 2.16035 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03350 4.10603 4.10603 1.46634 0.26236 0.44443 1.02497 22 0.50888 2.32174 1.86813 1.92199 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06886 4.14756 2.98099 1.46634 0.26236 1.09861 0.40547 23 2.03459 1.73217 1.63342 0.69896 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03330 4.11199 4.11199 1.46634 0.26236 1.65076 0.21307 24 2.23579 1.74716 2.09170 0.51861 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03330 4.11199 4.11199 1.46634 0.26236 0.48419 0.95762 25 2.67135 1.83180 2.81499 0.34135 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 26 1.87477 1.44447 2.28027 0.67632 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 27 1.41563 2.50105 0.59379 2.09559 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 28 2.62217 1.69540 2.76327 0.38457 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 29 2.79320 2.12894 2.94147 0.26524 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 30 3.00792 0.24686 3.18365 2.05632 - C - - : 1.38629 1.38629 1.38629 1.38629 0.09413 4.14756 2.60319 1.46634 0.26236 1.09861 0.40547 31 3.18165 0.15693 3.34340 2.68235 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03414 4.08756 4.08756 1.46634 0.26236 0.35550 1.20672 32 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 33 2.49391 2.42859 2.00463 0.36450 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 34 2.51841 3.02570 0.24819 2.40044 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07212 4.14756 2.92284 1.46634 0.26236 1.09861 0.40547 35 1.72311 0.85427 2.22238 1.24639 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10884 4.10884 1.46634 0.26236 0.46227 0.99385 36 0.65889 1.88590 1.90136 1.70640 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 37 1.92619 3.13442 0.27972 2.90443 - G - - : 1.38629 1.38629 1.38629 1.38629 0.06182 4.14756 3.12026 1.46634 0.26236 1.09861 0.40547 38 2.69933 2.00553 2.84387 0.30116 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03307 4.11881 4.11881 1.46634 0.26236 0.53997 0.87411 39 0.20281 3.14136 2.43270 2.94610 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 40 2.70660 0.46377 2.85702 1.39881 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 41 0.19663 3.16111 2.46856 2.96779 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 42 2.10187 0.72410 2.44125 1.18429 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 43 2.89902 0.30846 3.06575 1.80958 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 44 2.11759 2.46831 2.72792 0.31527 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 45 2.79126 2.12454 2.93949 0.26621 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 46 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 47 3.30226 0.13877 3.46913 2.78667 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 48 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07503 4.14756 2.87387 1.46634 0.26236 1.09861 0.40547 49 0.66651 1.90151 1.87206 1.69633 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03350 4.10603 4.10603 1.46634 0.26236 0.44443 1.02497 50 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 51 0.52285 2.01969 2.31376 1.73962 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 52 2.03822 3.19411 0.25187 2.96823 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 53 0.19689 3.16026 2.46701 2.96685 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 54 2.27417 0.40192 2.74524 1.80879 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 55 0.28914 2.24237 2.76037 2.50567 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 56 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 57 1.95474 0.58589 2.03392 1.76628 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 58 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 59 3.12494 2.79698 3.25597 0.15487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 60 3.00792 0.24686 3.18365 2.05632 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 61 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 62 2.67913 2.53540 2.34399 0.27945 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 63 2.88490 0.31751 3.05041 1.77880 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 64 0.40276 2.47971 2.54864 1.77449 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 65 0.23413 3.05063 2.26938 2.84667 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 66 1.87237 3.10542 0.29445 2.87361 - G - - : 1.38629 1.38629 1.38629 1.38629 0.19317 2.10476 2.92284 0.02910 3.55136 1.09861 0.40547 67 1.82469 1.58329 1.94297 0.71303 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10884 4.10884 1.46634 0.26236 0.46227 0.99385 68 0.09317 3.64212 3.42746 3.49680 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 69 2.50835 3.00791 0.25428 2.36738 - G - - : 1.38629 1.38629 1.38629 1.38629 0.11075 4.14756 2.41877 1.46634 0.26236 1.09861 0.40547 70 1.77774 2.15383 0.54518 2.00098 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03470 4.07151 4.07151 1.46634 0.26236 0.30380 1.33944 71 1.82659 2.19954 2.00869 0.52084 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 72 0.55245 1.50728 2.44205 2.15443 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 73 0.45314 2.38136 2.02343 1.96795 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 74 2.44187 2.22002 0.30901 2.65610 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03212 4.14756 4.14756 1.46634 0.26236 1.09861 0.40547 75 0.29803 2.66342 2.73369 2.09531 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06046 4.14756 3.14959 1.46634 0.26236 1.09861 0.40547 76 1.59705 0.94374 1.71505 1.47673 - c - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //