INFERNAL1/a [1.1.5 | Sep 2023] NAME STnc220 ACC RF02077 DESC Salmonella enterica sRNA STnc220 STATES 246 NODES 74 CLEN 79 W 98 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:57:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02077/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.378906 CKSUM 2594458145 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 101.70 NC 57.20 EFP7GF -6.9196 0.71876 ECMLC 0.60699 -6.60610 2.77036 1600000 355564 0.003375 ECMGC 0.39175 -12.78988 -0.73826 1600000 44923 0.008904 ECMLI 0.55270 -4.56889 5.06631 1600000 246579 0.004867 ECMGI 0.42872 -7.58163 3.26036 1600000 41759 0.009579 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 98 119 -6.703 -6.910 -0.063 -5.324 IL 1 1 2 1 4 7 36 101 122 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 6 36 100 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 7 36 98 119 -7.738 -0.024 -6.392 1.046 -1.245 -0.170 -0.680 D 4 2 3 5 3 3 31 96 117 -6.174 -1.687 -0.566 IL 5 5 3 5 3 6 35 99 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 7 35 97 118 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 7 5 3 8 3 2 30 95 116 -6.174 -1.687 -0.566 IL 8 8 3 8 3 6 34 98 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 6 34 96 117 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 10 8 3 11 3 2 30 94 115 -6.174 -1.687 -0.566 IL 11 11 3 11 3 5 34 97 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - c - - - ML 12 11 3 14 3 6 33 95 116 -7.738 -0.024 -6.392 -0.627 0.823 -1.405 0.269 D 13 11 3 14 3 2 29 93 114 -6.174 -1.687 -0.566 IL 14 14 3 14 3 5 33 96 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 6 32 94 114 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 16 14 3 17 3 2 28 92 113 -6.174 -1.687 -0.566 IL 17 17 3 17 3 4 32 95 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 5 32 93 113 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 19 17 3 20 3 1 27 91 112 -6.174 -1.687 -0.566 IL 20 20 3 20 3 4 31 94 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - u - - - ML 21 20 3 23 3 5 31 91 112 -7.738 -0.024 -6.392 -0.339 -0.753 -0.351 0.873 D 22 20 3 23 3 1 27 90 111 -6.174 -1.687 -0.566 IL 23 23 3 23 3 4 30 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - c - - - ML 24 23 3 26 3 4 30 90 111 -8.144 -0.022 -6.462 -0.627 0.823 -1.405 0.269 D 25 23 3 26 3 1 26 89 110 -5.620 -0.734 -1.403 IL 26 26 3 26 3 3 29 91 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 81 - C - - MR 27 26 3 29 3 4 29 89 110 -8.144 -0.022 -6.462 -1.210 1.443 -2.009 -0.734 D 28 26 3 29 3 0 24 88 109 -6.390 -1.568 -0.620 IR 29 29 3 29 3 3 28 90 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 80 - C - - MR 30 29 3 32 5 3 28 88 109 -6.898 -0.045 -6.713 -6.926 -7.817 -1.210 1.443 -2.009 -0.734 D 31 29 3 32 5 0 24 87 108 -5.352 -0.707 -2.978 -4.409 -2.404 IR 32 32 3 32 5 2 27 89 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 79 G C - - MP 33 32 3 37 6 4 27 87 108 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -4.304 -2.888 -4.374 0.482 -4.616 -4.515 -0.086 -4.577 -4.027 3.513 -4.398 -0.575 -0.485 -4.177 -2.102 -3.257 ML 34 32 3 37 6 2 25 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 23 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 21 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 2 26 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 2 26 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 78 C G - - MP 39 38 6 43 4 3 26 85 106 -6.703 -6.910 -0.063 -5.324 -4.105 -3.966 -3.867 -0.245 -2.691 -4.335 3.385 -3.455 -3.905 0.072 -4.210 -1.909 0.863 -4.201 -0.391 -2.761 ML 40 38 6 43 4 1 24 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 22 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 0 21 84 105 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 2 25 87 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 45 44 6 47 3 2 24 83 104 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 46 44 6 47 3 0 20 82 102 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - C - - - ML 48 47 3 50 3 2 23 82 103 -7.738 -0.024 -6.392 -1.210 1.443 -2.009 -0.734 D 49 47 3 50 3 0 19 81 101 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 23 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - A - - - ML 51 50 3 53 3 1 22 81 102 -8.144 -0.022 -6.462 1.601 -1.922 -1.599 -1.423 D 52 50 3 53 3 0 19 80 101 -5.620 -0.734 -1.403 IL 53 53 3 53 3 1 22 82 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 77 - U - - MR 54 53 3 56 3 1 21 80 101 -8.144 -0.022 -6.462 -1.081 -1.151 -1.790 1.479 D 55 53 3 56 3 0 17 78 99 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 21 81 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 76 - a - - MR 57 56 3 59 3 1 20 79 100 -2.335 -0.339 -6.462 0.981 -0.944 -0.990 0.004 D 58 56 3 59 3 0 17 76 97 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 20 80 100 -1.369 -0.771 -5.234 0.000 0.000 0.000 0.000 [ MATR 18 ] - 73 - U - - MR 60 59 3 62 3 1 19 77 97 -8.144 -0.022 -6.462 -1.081 -1.151 -1.790 1.479 D 61 59 3 62 3 0 16 75 95 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 19 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 72 - U - - MR 63 62 3 65 3 1 18 76 96 -8.144 -0.022 -6.462 -1.081 -1.151 -1.790 1.479 D 64 62 3 65 3 0 16 74 94 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 18 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 71 - U - - MR 66 65 3 68 3 1 17 75 95 -8.144 -0.022 -6.462 -1.081 -1.151 -1.790 1.479 D 67 65 3 68 3 0 15 73 93 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 17 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 70 - U - - MR 69 68 3 71 3 1 16 74 94 -8.144 -0.022 -6.462 -1.081 -1.151 -1.790 1.479 D 70 68 3 71 3 0 15 72 92 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 16 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 69 - U - - MR 72 71 3 74 2 1 15 72 93 -8.081 -0.005 -1.081 -1.151 -1.790 1.479 D 73 71 3 74 2 0 14 72 92 -4.432 -0.068 IR 74 74 3 74 2 1 16 73 94 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 23 ] - - - - - - B 75 74 3 76 111 0 14 71 92 [ BEGL 24 ] - - - - - - S 76 75 1 77 4 0 0 25 44 -0.049 -6.715 -6.122 -6.762 [ MATP 25 ] 14 24 G C - - MP 77 76 1 81 6 2 2 25 44 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -4.304 -2.888 -4.374 0.482 -4.616 -4.515 -0.086 -4.577 -4.027 3.513 -4.398 -0.575 -0.485 -4.177 -2.102 -3.257 ML 78 76 1 81 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 79 76 1 81 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 1 81 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 15 23 G C - - MP 83 82 6 87 6 2 2 23 42 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -4.304 -2.888 -4.374 0.482 -4.616 -4.515 -0.086 -4.577 -4.027 3.513 -4.398 -0.575 -0.485 -4.177 -2.102 -3.257 ML 84 82 6 87 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 22 a u - - MP 89 88 6 93 4 2 2 21 40 -6.703 -6.910 -0.063 -5.324 -3.136 -2.283 -3.232 2.607 -3.606 -4.394 0.606 -3.415 -3.153 1.788 -3.689 1.086 0.320 -3.571 -1.294 -2.117 ML 90 88 6 93 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 93 93 5 93 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 17 - C - - - ML 95 94 6 97 3 1 1 18 36 -7.738 -0.024 -6.392 -1.210 1.443 -2.009 -0.734 D 96 94 6 97 3 0 0 17 36 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 18 - A - - - ML 98 97 3 100 3 1 1 16 35 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 99 97 3 100 3 0 0 16 34 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 19 - G - - - ML 101 100 3 103 3 1 1 15 33 -7.738 -0.024 -6.392 -1.099 -2.236 1.583 -1.620 D 102 100 3 103 3 0 0 15 33 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - g - - - ML 104 103 3 106 3 1 1 13 32 -7.738 -0.024 -6.392 0.167 -1.386 0.936 -0.781 D 105 103 3 106 3 0 0 13 32 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - U - - - ML 107 106 3 109 2 1 1 1 1 * 0.000 -1.081 -1.151 -1.790 1.479 D 108 106 3 109 2 0 0 0 0 * 0.000 IL 109 109 3 109 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 33 ] - - - - - - E 110 109 3 -1 0 0 0 0 0 [ BEGR 34 ] - - - - - - S 111 75 1 112 3 0 5 60 80 -7.738 -0.024 -6.392 IL 112 112 2 112 3 1 4 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 25 - G - - - ML 113 112 2 115 3 1 5 60 80 -7.738 -0.024 -6.392 -1.099 -2.236 1.583 -1.620 D 114 112 2 115 3 0 0 58 78 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 4 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - C - - - ML 116 115 3 118 3 1 5 59 79 -7.738 -0.024 -6.392 -1.210 1.443 -2.009 -0.734 D 117 115 3 118 3 0 0 57 77 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 3 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - u - - - ML 119 118 3 121 3 1 4 58 78 -7.738 -0.024 -6.392 -0.531 0.381 -1.286 0.674 D 120 118 3 121 3 0 0 56 76 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 3 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 28 - A - - - ML 122 121 3 124 3 1 4 57 77 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 123 121 3 124 3 0 0 55 75 -6.174 -1.687 -0.566 IL 124 124 3 124 3 1 2 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 29 - G - - - ML 125 124 3 127 3 1 3 56 75 -7.738 -0.024 -6.392 -1.099 -2.236 1.583 -1.620 D 126 124 3 127 3 0 0 54 74 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 2 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - A - - - ML 128 127 3 130 3 1 3 55 74 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 129 127 3 130 3 0 0 53 73 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - U - - - ML 131 130 3 133 3 1 2 54 73 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 132 130 3 133 3 0 0 52 72 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - U - - - ML 134 133 3 136 3 1 2 53 72 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 135 133 3 136 3 0 0 51 71 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - U - - - ML 137 136 3 139 3 1 2 51 71 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 138 136 3 139 3 0 0 50 70 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 140 139 3 142 3 1 1 50 70 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 141 139 3 142 3 0 0 49 69 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - A - - - ML 143 142 3 145 3 1 1 49 69 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 144 142 3 145 3 0 0 48 68 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - g - - - ML 146 145 3 148 3 1 1 48 68 -7.738 -0.024 -6.392 0.130 -1.405 0.966 -0.800 D 147 145 3 148 3 0 0 47 67 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - A - - - ML 149 148 3 151 3 1 1 47 67 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 150 148 3 151 3 0 0 46 65 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - A - - - ML 152 151 3 154 3 1 1 46 66 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 153 151 3 154 3 0 0 45 64 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - a - - - ML 155 154 3 157 3 1 1 45 64 -7.738 -0.024 -6.392 0.981 -0.944 -0.990 0.004 D 156 154 3 157 3 0 0 44 63 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - A - - - ML 158 157 3 160 3 1 1 44 63 -7.738 -0.189 -3.084 1.601 -1.922 -1.599 -1.423 D 159 157 3 160 3 0 0 43 62 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - U - - - ML 161 160 3 163 3 1 1 43 62 -7.576 -0.027 -6.231 -0.811 -0.936 -1.498 1.353 D 162 160 3 163 3 0 0 42 61 -7.052 -0.678 -1.444 IL 163 163 3 163 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - A - - - ML 164 163 3 166 3 1 1 42 61 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 165 163 3 166 3 0 0 41 60 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - A - - - ML 167 166 3 169 3 1 1 41 60 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 168 166 3 169 3 0 0 39 59 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 44 - U - - - ML 170 169 3 172 3 1 1 40 59 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 171 169 3 172 3 0 0 38 58 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 45 - U - - - ML 173 172 3 175 3 1 1 39 58 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 174 172 3 175 3 0 0 37 57 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 46 - C - - - ML 176 175 3 178 3 1 1 37 57 -7.738 -0.024 -6.392 -1.210 1.443 -2.009 -0.734 D 177 175 3 178 3 0 0 36 56 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 47 - A - - - ML 179 178 3 181 3 1 1 36 55 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 180 178 3 181 3 0 0 35 54 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 48 - U - - - ML 182 181 3 184 3 1 1 35 54 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 183 181 3 184 3 0 0 34 53 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 49 - A - - - ML 185 184 3 187 3 1 1 34 53 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 186 184 3 187 3 0 0 33 52 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 50 - U - - - ML 188 187 3 190 3 1 1 33 52 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 189 187 3 190 3 0 0 32 51 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 51 - U - - - ML 191 190 3 193 5 1 1 32 51 -6.898 -0.045 -6.713 -6.926 -7.817 -1.081 -1.151 -1.790 1.479 D 192 190 3 193 5 0 0 31 49 -4.959 -0.803 -4.221 -2.596 -2.508 IL 193 193 3 193 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 52 68 a u - - MP 194 193 3 198 6 2 2 31 50 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -2.776 0.084 -2.890 2.400 -3.119 -3.853 0.827 -3.147 -2.889 1.874 -3.406 0.051 0.566 -3.102 -0.965 -1.896 ML 195 193 3 198 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 3 198 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 3 198 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 53 67 G C - - MP 200 199 6 204 6 2 2 29 48 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -3.718 -2.556 -3.767 0.927 -4.219 -4.344 0.236 -4.065 -3.665 3.203 -4.085 0.682 -0.068 -3.761 -1.734 -2.674 ML 201 199 6 204 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 203 199 6 204 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 204 204 5 204 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 205 205 6 205 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 54 66 C G - - MP 206 205 6 210 6 2 2 27 46 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -4.105 -3.966 -3.867 -0.245 -2.691 -4.335 3.385 -3.455 -3.905 0.072 -4.210 -1.909 0.863 -4.201 -0.391 -2.761 ML 207 205 6 210 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 208 205 6 210 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 209 205 6 210 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 210 210 5 210 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 211 211 6 211 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 55 65 U A - - MP 212 211 6 216 6 2 2 25 44 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -3.752 -3.556 -3.635 0.113 -2.678 -4.238 1.638 -3.340 -3.646 0.447 -4.040 -1.468 3.066 -3.917 -0.365 -2.509 ML 213 211 6 216 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 214 211 6 216 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 215 211 6 216 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 216 216 5 216 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 217 217 6 217 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 56 64 C G - - MP 218 217 6 222 6 2 2 23 42 -9.019 -8.958 -0.022 -7.735 -8.014 -8.409 -4.105 -3.966 -3.867 -0.245 -2.691 -4.335 3.385 -3.455 -3.905 0.072 -4.210 -1.909 0.863 -4.201 -0.391 -2.761 ML 219 217 6 222 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 220 217 6 222 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 221 217 6 222 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 222 222 5 222 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 223 223 6 223 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 57 63 C G - - MP 224 223 6 228 4 2 2 21 40 -6.703 -6.910 -0.063 -5.324 -4.105 -3.966 -3.867 -0.245 -2.691 -4.335 3.385 -3.455 -3.905 0.072 -4.210 -1.909 0.863 -4.201 -0.391 -2.761 ML 225 223 6 228 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 226 223 6 228 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 227 223 6 228 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 228 228 5 228 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 229 229 6 229 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 58 - g - - - ML 230 229 6 232 3 1 1 18 36 -7.738 -0.024 -6.392 -0.359 -1.082 0.831 -0.046 D 231 229 6 232 3 0 0 17 36 -6.174 -1.687 -0.566 IL 232 232 3 232 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 59 - U - - - ML 233 232 3 235 3 1 1 16 35 -7.738 -0.024 -6.392 -1.081 -1.151 -1.790 1.479 D 234 232 3 235 3 0 0 16 34 -6.174 -1.687 -0.566 IL 235 235 3 235 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 60 - A - - - ML 236 235 3 238 3 1 1 15 33 -7.738 -0.024 -6.392 1.601 -1.922 -1.599 -1.423 D 237 235 3 238 3 0 0 15 33 -6.174 -1.687 -0.566 IL 238 238 3 238 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 61 - C - - - ML 239 238 3 241 3 1 1 13 32 -7.738 -0.024 -6.392 -1.210 1.443 -2.009 -0.734 D 240 238 3 241 3 0 0 13 32 -6.174 -1.687 -0.566 IL 241 241 3 241 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 62 - A - - - ML 242 241 3 244 2 1 1 1 1 * 0.000 1.601 -1.922 -1.599 -1.423 D 243 241 3 244 2 0 0 0 0 * 0.000 IL 244 244 3 244 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 245 244 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME STnc220 ACC RF02077 DESC Salmonella enterica sRNA STnc220 LENG 79 MAXL 171 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:57:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02077/CM NSEQ 4 EFFN 1.667969 CKSUM 2594458145 STATS LOCAL MSV -8.0352 0.71876 STATS LOCAL VITERBI -9.5123 0.71876 STATS LOCAL FORWARD -3.5652 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29382 1.49300 1.60417 1.20389 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 0.00000 * 1 0.62708 2.32179 1.49958 1.93429 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 2 2.28586 2.30660 2.78716 0.30501 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 3 0.22854 2.88675 2.64606 2.55597 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 4 1.90236 0.75984 2.45254 1.21413 4 c - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 5 0.22854 2.88675 2.64606 2.55597 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 6 2.28586 2.30660 2.78716 0.30501 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 7 1.67258 1.95699 1.63704 0.74149 7 u - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 8 1.90236 0.75984 2.45254 1.21413 8 c - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 9 2.36006 2.86718 0.23733 2.81343 9 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 10 2.84834 0.34395 2.57576 1.85153 10 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 11 2.28586 2.30660 2.78716 0.30501 11 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 12 2.42180 0.31181 2.98629 2.05071 12 C - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 13 0.22854 2.88675 2.64606 2.55597 13 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 14 2.36726 2.87424 0.23519 2.82371 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 15 2.36540 2.87241 0.23575 2.82105 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 16 0.82423 2.33389 1.04081 2.19515 16 a - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 17 2.42180 0.31181 2.98629 2.05071 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 18 0.22854 2.88675 2.64606 2.55597 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 19 2.32911 3.14990 0.23049 2.72395 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 20 1.28695 2.43388 0.68654 2.01830 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 21 2.28586 2.30660 2.78716 0.30501 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 22 2.41415 1.51900 2.13978 0.55522 22 U - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 23 3.02586 0.27792 2.69615 2.06626 23 C - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 24 3.01709 0.27908 2.69265 2.06454 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 25 2.32911 3.14990 0.23049 2.72395 25 G - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 26 2.42180 0.31181 2.98629 2.05071 26 C - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 27 1.81935 1.08701 2.35176 0.90277 27 u - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 28 0.22854 2.88675 2.64606 2.55597 28 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 29 2.32911 3.14990 0.23049 2.72395 29 G - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 30 0.22854 2.88675 2.64606 2.55597 30 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 31 2.28586 2.30660 2.78716 0.30501 31 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 32 2.28586 2.30660 2.78716 0.30501 32 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 33 2.28586 2.30660 2.78716 0.30501 33 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 34 2.28586 2.30660 2.78716 0.30501 34 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 35 0.22854 2.88675 2.64606 2.55597 35 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 36 1.31570 2.44942 0.66450 2.03380 36 G - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 37 0.22854 2.88675 2.64606 2.55597 37 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 38 0.22854 2.88675 2.64606 2.55597 38 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 39 0.67459 2.08699 2.12663 1.39700 39 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 40 0.22854 2.88675 2.64606 2.55597 40 A - - , 1.38629 1.38629 1.38629 1.38629 0.18655 3.78579 1.91396 1.46634 0.26236 1.09861 0.40547 41 2.06782 2.12985 2.55400 0.39021 41 U - - , 1.38629 1.38629 1.38629 1.38629 0.05325 3.65248 3.65248 1.46634 0.26236 0.26826 1.44694 42 0.22854 2.88675 2.64606 2.55597 42 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 43 0.22854 2.88675 2.64606 2.55597 43 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 44 2.28586 2.30660 2.78716 0.30501 44 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 45 2.28586 2.30660 2.78716 0.30501 45 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 46 2.42180 0.31181 2.98629 2.05071 46 C - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 47 0.22854 2.88675 2.64606 2.55597 47 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 48 2.28586 2.30660 2.78716 0.30501 48 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 49 0.22854 2.88675 2.64606 2.55597 49 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 50 2.28586 2.30660 2.78716 0.30501 50 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 51 2.28586 2.30660 2.78716 0.30501 51 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 52 0.79253 2.13209 1.23458 1.98226 52 a - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 53 2.01581 2.58718 0.34677 2.47001 53 G - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 54 2.84978 0.34372 2.57635 1.85175 54 C - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 55 2.60845 1.64380 2.31239 0.45557 55 U - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 56 2.84870 0.34389 2.57591 1.85158 56 C - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 57 2.84812 0.34398 2.57567 1.85150 57 C - - < 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 58 1.69681 2.20300 0.75551 1.44185 58 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 59 2.28586 2.30660 2.78716 0.30501 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 60 0.22854 2.88675 2.64606 2.55597 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 61 2.42180 0.31181 2.98629 2.05071 61 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 62 0.22854 2.88675 2.64606 2.55597 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 63 2.12475 2.74151 0.29823 2.60460 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 64 2.12481 2.74158 0.29820 2.60470 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 65 0.51903 2.48884 1.48043 2.36066 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 66 2.12435 2.74104 0.29840 2.60399 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 67 2.69311 0.49156 2.40232 1.46901 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 68 2.20271 1.19814 1.93572 0.81324 68 u - - > 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 69 2.28586 2.30660 2.78716 0.30501 69 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 70 2.28586 2.30660 2.78716 0.30501 70 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 71 2.28586 2.30660 2.78716 0.30501 71 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 72 2.28586 2.30660 2.78716 0.30501 72 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 73 2.28586 2.30660 2.78716 0.30501 73 U - - , 1.38629 1.38629 1.38629 1.38629 0.34731 1.30667 3.78579 0.75208 0.63749 1.09861 0.40547 74 0.67459 2.08699 2.12663 1.39700 76 A - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 75 2.28586 2.30660 2.78716 0.30501 77 U - - , 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 76 2.12744 2.74463 0.29712 2.60873 78 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 77 3.04321 0.27564 2.70301 2.06964 79 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 78 2.42180 0.31181 2.98629 2.05071 80 C - - : 1.38629 1.38629 1.38629 1.38629 0.04644 3.78579 3.78579 1.46634 0.26236 1.09861 0.40547 79 2.42180 0.31181 2.98629 2.05071 81 C - - : 1.38629 1.38629 1.38629 1.38629 0.02349 3.76283 * 1.46634 0.26236 0.00000 * //