# STOCKHOLM 1.0
#=GF ID STnc70
#=GF AC RF02069
#=GF DE Enterobacterial sRNA STnc70
#=GF AU Barquist LE; 0000-0003-4732-2667
#=GF GA 40.0
#=GF NC 39.5
#=GF TC 41.1
#=GF SE Burge SW
#=GF SS Predicted; Pfold; Burge SW
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 27.29 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 18725932
#=GF RT Deep sequencing analysis of small noncoding RNA and mRNA targets of the
#=GF RT global post-transcriptional regulator, Hfq.
#=GF RA Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT,
#=GF RA Hinton JC, Vogel J
#=GF RL PLoS Genet. 2008;4:e1000163.
#=GF WK Non-coding_RNA
#=GF SQ 2

AM933173.1/660477-660625   GAGCGCAACACUUAGCCAGCAUAUACGCUAUGGAUUUCGAGUUGCAGACAAUACGUCUGUAAUUUGCAAGACGAGUCGUACUGGCUCUGAAGUUACCUACGGGUAGUUCAGGUAAUGGGGCCGCCUGUCAGGCGGCCUUUUUACUUUAG
CP000880.1/2252604-2252456 GAGCGCAACACUUAGCCAGCAUAUACUCUGUGCAUUUCGAGUUGCAGACAACGGGUCUGUAAUUUGAAAGAGGAGUUGUACUGGCUCUGAAGUUACCUACGGGUAGUUCAGGUAAUGGGGCCGCCUGUCAGGUGGCCUUUUUACUUUAG
#=GC SS_cons               :::::::::::::<<<<<<---------------<<<<<<<<<<<<<<<_____>>>>>>>>>>>>>>>----------->>>>>>::::::::<<<____>>>:::::::<<<--<<<<<<<<<<___>>>>>>>>>>-->>>:::::
#=GC RF                    GAGCGCAACACUUaGCCaGCAUAUACuCUaUGgAuuuCgaguugCaGaCAAuagGuCuGuaauuuGaaaGAgGAGUuGUACuGGCuCUGAAGUUaCCUACGGGuAGUUCAGGuaAUggGGCCgCCuGUCaGGcGGCCuuUUuaCUUUAG
//
