INFERNAL1/a [1.1.5 | Sep 2023] NAME MIR2907 ACC RF02027 DESC microRNA MIR2907 STATES 199 NODES 47 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 14:31:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates_3/RF02027/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.754883 CKSUM 861849724 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 60.00 NC 59.90 EFP7GF -8.7579 0.71915 ECMLC 0.64812 -5.16201 3.32624 1600000 294042 0.004081 ECMGC 0.39593 -16.93576 -2.68915 1600000 112661 0.003550 ECMLI 0.61879 -3.72270 4.81786 1600000 236789 0.005068 ECMGI 0.42803 -11.80115 0.60680 1600000 81016 0.004937 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 81 101 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 IL 1 1 2 1 6 1 19 83 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 19 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 65 g c - - MP 3 2 3 7 6 2 21 81 101 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -2.998 0.533 -3.135 1.172 -3.525 -3.805 0.551 -3.440 -3.088 2.578 -3.488 1.130 0.291 -3.191 -1.267 -2.112 ML 4 2 3 7 6 1 16 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 15 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 11 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 18 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 18 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 64 a u - - MP 9 8 6 13 6 2 19 79 99 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -3.252 -2.334 -3.358 2.593 -3.852 -4.585 0.364 -3.547 -3.251 1.679 -3.791 1.583 0.099 -3.735 -1.525 -2.220 ML 10 8 6 13 6 1 15 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 14 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 10 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 17 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 17 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 63 G C - - MP 15 14 6 19 6 2 18 77 97 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.613 -3.033 -4.701 0.285 -5.051 -4.643 -0.447 -4.933 -4.242 3.606 -4.589 -0.727 -0.836 -4.383 -2.477 -3.579 ML 16 14 6 19 6 1 14 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 13 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 10 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 15 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 15 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 62 c g - - MP 21 20 6 25 4 2 16 75 95 -6.875 -7.082 -0.056 -5.496 -3.430 -3.480 -3.361 0.066 0.922 -3.956 2.935 -3.127 -3.396 0.212 -3.803 -1.658 1.110 -3.613 -0.194 -2.341 ML 22 20 6 25 4 1 13 75 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 11 75 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 10 74 94 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 15 77 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 14 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 27 26 6 29 3 1 14 73 93 -7.896 -0.022 -6.550 1.688 -2.235 -1.881 -1.764 D 28 26 6 29 3 0 9 71 91 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 13 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - c - - - ML 30 29 3 32 3 1 14 72 92 -8.291 -0.020 -6.609 -0.385 0.602 -0.184 -0.259 D 31 29 3 32 3 0 8 71 90 -5.620 -0.734 -1.403 IL 32 32 3 32 3 1 12 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 61 - A - - MR 33 32 3 35 3 1 13 71 91 -8.291 -0.020 -6.609 1.688 -2.235 -1.881 -1.764 D 34 32 3 35 3 0 7 69 89 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 11 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 60 - c - - MR 36 35 3 38 5 1 12 70 90 -7.034 -0.041 -6.850 -7.062 -7.954 -0.702 0.741 -1.490 0.441 D 37 35 3 38 5 0 6 69 88 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 10 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 59 C G - - MP 39 38 3 43 6 2 13 69 89 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 40 38 3 43 6 1 7 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 3 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 9 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 9 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 58 c g - - MP 45 44 6 49 6 2 12 67 87 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -3.675 -3.666 -3.511 -0.019 -2.418 -4.024 2.508 -3.154 -3.546 0.208 -3.904 -1.753 1.137 -3.797 2.220 -2.438 ML 46 44 6 49 6 1 7 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 6 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 2 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 8 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 8 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 57 C G - - MP 51 50 6 55 6 2 10 65 85 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 52 50 6 55 6 1 6 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 2 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 7 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 7 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 56 u g - - MP 57 56 6 61 4 2 8 63 82 -6.875 -7.082 -0.056 -5.496 -3.954 -3.869 -3.687 -0.217 -2.488 -4.135 1.794 -3.248 -3.726 0.000 -4.033 -1.874 0.965 -4.052 2.913 -2.605 ML 58 56 6 61 4 1 5 63 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 3 63 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 2 62 82 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 7 64 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 6 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - c - - - ML 63 62 6 65 3 1 7 60 80 -7.896 -0.022 -6.550 0.297 0.573 -1.160 -0.259 D 64 62 6 65 3 0 1 59 79 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - u - - - ML 66 65 3 68 3 1 6 59 79 -7.896 -0.022 -6.550 -0.691 0.033 -1.442 0.993 D 67 65 3 68 3 0 1 58 78 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - C - - - ML 69 68 3 71 3 1 5 58 78 -7.896 -0.022 -6.550 -1.577 1.577 -2.395 -1.025 D 70 68 3 71 3 0 0 57 77 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - U - - - ML 72 71 3 74 3 1 5 57 77 -7.896 -0.022 -6.550 -1.361 -1.380 -2.088 1.581 D 73 71 3 74 3 0 0 56 75 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - C - - - ML 75 74 3 77 3 1 4 56 76 -7.896 -0.022 -6.550 -1.577 1.577 -2.395 -1.025 D 76 74 3 77 3 0 0 55 74 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - C - - - ML 78 77 3 80 3 1 3 55 74 -8.291 -0.020 -6.609 -1.577 1.577 -2.395 -1.025 D 79 77 3 80 3 0 0 54 73 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 2 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 55 - C - - MR 81 80 3 83 3 1 3 54 73 -8.291 -0.020 -6.609 -1.577 1.577 -2.395 -1.025 D 82 80 3 83 3 0 0 52 72 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 54 - U - - MR 84 83 3 86 3 1 2 53 72 -8.291 -0.020 -6.609 -1.361 -1.380 -2.088 1.581 D 85 83 3 86 3 0 0 52 71 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 53 - C - - MR 87 86 3 89 5 1 2 52 71 -7.034 -0.041 -6.850 -7.062 -7.954 -1.577 1.577 -2.395 -1.025 D 88 86 3 89 5 0 0 51 70 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 52 G C - - MP 90 89 3 94 6 2 3 51 70 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -3.544 0.425 -3.605 0.900 -4.033 -4.179 0.224 -3.960 -3.569 3.132 -3.985 -0.261 -0.052 -3.584 -1.665 -2.584 ML 91 89 3 94 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 51 C G - - MP 96 95 6 100 6 2 3 49 68 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 97 95 6 100 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 50 C G - - MP 102 101 6 106 6 2 3 47 66 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 103 101 6 106 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 49 C G - - MP 108 107 6 112 4 2 2 45 64 -6.875 -7.082 -0.056 -5.496 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 109 107 6 112 4 1 1 46 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 45 65 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 44 64 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 47 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 21 - A - - - ML 114 113 6 116 3 1 1 43 62 -8.291 -0.020 -6.609 1.009 -1.346 0.015 -0.778 D 115 113 6 116 3 0 0 41 60 -5.620 -0.734 -1.403 IL 116 116 3 116 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 48 - A - - MR 117 116 3 119 3 1 1 42 61 -8.291 -0.020 -6.609 1.688 -2.235 -1.881 -1.764 D 118 116 3 119 3 0 0 40 59 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 47 - G - - MR 120 119 3 122 3 1 1 41 60 -8.291 -0.020 -6.609 -1.435 -2.632 1.688 -2.018 D 121 119 3 122 3 0 0 39 58 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 46 - C - - MR 123 122 3 125 5 1 1 40 59 -7.034 -0.041 -6.850 -7.062 -7.954 -1.577 1.577 -2.395 -1.025 D 124 122 3 125 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 125 125 3 125 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 45 C G - - MP 126 125 3 130 6 2 2 39 58 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 127 125 3 130 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 3 130 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 3 130 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 44 u a - - MP 132 131 6 136 6 2 2 37 56 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -2.520 -2.526 -2.630 0.773 -2.248 -3.418 1.684 -2.725 0.431 0.956 -3.181 -0.777 2.259 -2.804 -0.154 -1.725 ML 133 131 6 136 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 43 c g - - MP 138 137 6 142 6 2 2 35 54 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -3.653 -3.621 -3.509 0.065 -2.430 -4.045 2.890 -3.155 -3.532 0.296 -3.904 -1.665 1.184 -3.783 1.437 -2.416 ML 139 137 6 142 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 42 G C - - MP 144 143 6 148 6 2 2 33 52 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.613 -3.033 -4.701 0.285 -5.051 -4.643 -0.447 -4.933 -4.242 3.606 -4.589 -0.727 -0.836 -4.383 -2.477 -3.579 ML 145 143 6 148 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 41 G C - - MP 150 149 6 154 6 2 2 31 50 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.613 -3.033 -4.701 0.285 -5.051 -4.643 -0.447 -4.933 -4.242 3.606 -4.589 -0.727 -0.836 -4.383 -2.477 -3.579 ML 151 149 6 154 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 40 C G - - MP 156 155 6 160 4 2 2 28 48 -6.875 -7.082 -0.056 -5.496 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 157 155 6 160 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 159 155 6 160 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 160 160 5 160 4 1 1 30 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - C - - - ML 162 161 6 164 3 1 1 26 45 -7.896 -0.022 -6.550 -1.577 1.577 -2.395 -1.025 D 163 161 6 164 3 0 0 25 44 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - a - - - ML 165 164 3 167 3 1 1 25 43 -8.291 -0.020 -6.609 0.957 -1.335 0.102 -0.761 D 166 164 3 167 3 0 0 23 42 -5.620 -0.734 -1.403 IL 167 167 3 167 3 1 1 26 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 39 - A - - MR 168 167 3 170 3 1 1 24 42 -8.291 -0.020 -6.609 1.688 -2.235 -1.881 -1.764 D 169 167 3 170 3 0 0 22 41 -6.390 -1.568 -0.620 IR 170 170 3 170 3 1 1 25 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 38 - C - - MR 171 170 3 173 5 1 1 23 41 -7.034 -0.041 -6.850 -7.062 -7.954 -1.577 1.577 -2.395 -1.025 D 172 170 3 173 5 0 0 21 40 -5.352 -0.707 -2.978 -4.409 -2.404 IR 173 173 3 173 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 30 37 C G - - MP 174 173 3 178 6 2 2 22 40 -9.080 -9.019 -0.022 -7.796 -8.075 -8.471 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 175 173 3 178 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 3 178 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 3 178 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 31 36 C G - - MP 180 179 6 184 4 2 2 20 38 -6.875 -7.082 -0.056 -5.496 -4.415 -4.309 -4.127 -0.553 -2.875 -4.556 3.507 -3.672 -4.172 -0.293 -4.447 -2.254 0.652 -4.493 -0.579 -3.017 ML 181 179 6 184 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 184 184 5 184 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - A - - - ML 186 185 6 188 3 1 1 16 35 -7.896 -0.022 -6.550 1.688 -2.235 -1.881 -1.764 D 187 185 6 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - C - - - ML 189 188 3 191 3 1 1 15 33 -7.896 -0.022 -6.550 -1.577 1.577 -2.395 -1.025 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - g - - - ML 192 191 3 194 3 1 1 13 32 -7.896 -0.022 -6.550 0.377 -1.432 0.824 -0.836 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - u - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -0.687 0.052 -1.439 0.981 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MIR2907 ACC RF02027 DESC microRNA MIR2907 LENG 65 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 14:31:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates_3/RF02027/CM NSEQ 3 EFFN 2.493164 CKSUM 861849724 STATS LOCAL MSV -8.6701 0.71915 STATS LOCAL VITERBI -8.7068 0.71915 STATS LOCAL FORWARD -3.4526 0.71915 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.71116 1.02247 1.24072 1.76924 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 0.00000 * 1 1.34187 2.44605 0.59463 2.30016 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 2 0.77641 2.72019 0.92779 2.54262 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 3 2.63908 3.32222 0.15750 3.26436 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 4 2.71659 0.39444 2.53079 1.71344 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 5 0.14331 3.31148 3.02852 3.02281 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 6 1.79022 0.86126 1.49271 1.68370 6 c - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 7 3.26888 0.22317 3.05294 2.16496 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 8 2.81858 0.96025 2.60743 0.72611 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 9 3.27104 0.22295 3.05399 2.16535 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 10 3.00601 1.61201 2.80564 0.37026 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 11 1.17963 0.89598 2.33601 1.67297 11 c - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 12 2.02768 1.33978 2.56200 0.63619 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 13 2.93390 0.18458 3.51020 2.45963 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 14 2.67784 2.63030 3.19791 0.20042 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 15 2.93390 0.18458 3.51020 2.45963 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 16 2.93390 0.18458 3.51020 2.45963 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 17 1.52861 2.75273 0.43661 2.61474 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 18 3.27062 0.22300 3.05379 2.16527 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 19 3.27079 0.22298 3.05387 2.16530 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 20 3.27005 0.22305 3.05351 2.16517 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 21 0.62485 2.49089 1.34637 2.10670 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 22 3.26722 0.22334 3.05214 2.16467 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 23 2.12956 1.55417 1.36984 0.87804 23 u - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 24 2.71925 0.65237 2.49680 1.10589 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 25 2.63168 3.31316 0.15907 3.25181 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 26 2.63123 3.31261 0.15917 3.25105 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 27 3.26782 0.22328 3.05242 2.16477 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 28 2.93390 0.18458 3.51020 2.45963 28 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 29 0.66417 2.48138 1.27899 2.09268 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 30 3.26810 0.22325 3.05256 2.16482 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 31 3.27056 0.22300 3.05376 2.16526 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 32 0.14331 3.31148 3.02852 3.02281 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 33 2.93390 0.18458 3.51020 2.45963 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 34 1.12172 2.56046 0.73140 2.15612 34 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 35 2.02398 1.32407 2.55908 0.64541 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 36 2.44679 3.22570 0.19161 3.03513 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 37 2.44880 3.22851 0.19106 3.03849 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 38 2.93390 0.18458 3.51020 2.45963 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 39 0.14331 3.31148 3.02852 3.02281 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 40 2.44270 3.21997 0.19271 3.02831 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 41 3.45150 0.18867 3.14938 2.32930 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 42 3.45430 0.18844 3.15064 2.32983 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 43 1.95835 2.66046 0.34869 2.48438 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 44 0.73190 2.11371 1.37902 1.92146 44 a - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 45 2.44869 3.22835 0.19110 3.03829 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 46 2.93390 0.18458 3.51020 2.45963 46 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 47 2.77422 3.66203 0.13622 3.23730 47 G - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 48 0.14331 3.31148 3.02852 3.02281 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 49 2.44425 3.22213 0.19229 3.03089 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 50 2.44534 3.22367 0.19200 3.03271 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 51 2.44680 3.22571 0.19160 3.03515 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 52 2.85438 0.34560 2.57048 1.84443 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 53 2.93390 0.18458 3.51020 2.45963 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 54 2.67784 2.63030 3.19791 0.20042 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 55 2.93390 0.18458 3.51020 2.45963 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 56 2.16324 2.98503 0.26080 2.74770 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 57 2.44540 3.22375 0.19198 3.03281 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 58 2.01288 2.76856 0.31717 2.58449 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 59 2.44891 3.22866 0.19104 3.03866 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 60 2.04190 0.77981 2.61123 1.08387 60 c - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 61 0.14331 3.31148 3.02852 3.02281 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 62 1.24456 2.69350 0.57740 2.48971 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 63 3.47542 0.18669 3.16002 2.33379 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 64 2.76649 1.73442 2.51912 0.38554 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.03998 3.93248 3.93248 1.46634 0.26236 1.09861 0.40547 65 2.54053 0.67858 2.25238 1.17541 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.02019 3.91269 * 1.46634 0.26236 0.00000 * //