INFERNAL1/a [1.1.5 | Sep 2023] NAME MIR1223 ACC RF01941 DESC microRNA MIR1223 STATES 310 NODES 80 CLEN 102 W 150 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 08:29:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01941/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 2.045898 CKSUM 524510449 NULL 0.000 0.000 0.000 0.000 GA 77.00 TC 79.50 NC 75.70 EFP7GF -8.2433 0.71858 ECMLC 0.67314 -5.24958 2.57408 1600000 232467 0.005162 ECMGC 0.44008 -13.88815 -4.01500 1600000 30835 0.012972 ECMLI 0.70338 -2.87266 4.37141 1600000 195909 0.006125 ECMGI 0.51423 -7.42906 0.96329 1600000 29943 0.013359 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 150 211 -6.995 -7.202 -0.051 -5.616 IL 1 1 2 1 4 10 50 153 213 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 10 49 152 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 10 49 151 211 -8.008 -0.020 -6.662 0.394 0.070 -0.671 0.012 D 4 2 3 5 3 5 44 149 209 -6.174 -1.687 -0.566 IL 5 5 3 5 3 9 48 151 212 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 10 48 150 210 -8.396 -0.018 -6.713 -0.749 -1.000 -1.016 1.270 D 7 5 3 8 3 5 43 148 209 -5.620 -0.734 -1.403 IL 8 8 3 8 3 8 47 150 210 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 120 - G - - MR 9 8 3 11 3 9 47 149 209 -8.396 -0.018 -6.713 -1.674 -2.908 1.744 -2.296 D 10 8 3 11 3 4 41 147 207 -6.390 -1.568 -0.620 IR 11 11 3 11 3 8 46 149 209 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 119 - a - - MR 12 11 3 14 5 9 46 148 208 -7.132 -0.038 -6.947 -7.159 -8.051 0.445 -0.823 -0.339 0.360 D 13 11 3 14 5 3 40 146 206 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 6 44 148 208 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 118 G C - - MP 15 14 3 19 6 10 46 147 207 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.513 -2.574 -3.541 1.043 -3.870 -1.528 0.357 -3.968 -3.607 3.215 -3.988 -0.414 0.072 -3.419 -1.522 -2.591 ML 16 14 3 19 6 5 41 145 205 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 5 41 144 205 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 2 36 141 201 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 6 43 146 206 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 6 43 146 206 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 117 G C - - MP 21 20 6 25 6 9 44 145 205 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.326 -2.887 -4.371 0.874 -4.926 -4.619 -0.307 -4.690 -4.121 3.488 -4.490 -0.547 -0.632 -4.194 -2.321 -3.258 ML 22 20 6 25 6 5 40 143 203 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 4 39 143 203 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 1 36 139 200 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 5 42 144 204 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 6 42 144 204 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 116 a u - - MP 27 26 6 31 6 8 42 143 203 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -2.894 -2.529 -2.968 2.826 -3.042 -3.847 0.822 -3.233 -3.071 1.518 -3.580 -0.494 0.531 -1.220 -0.946 -2.070 ML 28 26 6 31 6 4 39 141 202 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 3 38 141 201 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 1 35 138 199 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 5 40 142 203 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 5 40 142 202 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 115 g c - - MP 33 32 6 37 4 6 40 141 201 -6.995 -7.202 -0.051 -5.616 -2.305 -1.988 -2.449 1.196 -2.549 -3.216 1.114 -2.788 -1.178 2.298 -3.011 0.531 0.894 -2.532 -0.549 -0.246 ML 34 32 6 37 4 3 38 140 200 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 2 36 139 200 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 1 35 138 198 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 5 39 141 201 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 4 39 140 201 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - g - - - ML 39 38 6 41 3 5 38 139 199 -8.008 -0.020 -6.662 -0.293 -0.011 0.296 -0.054 D 40 38 6 41 3 1 34 137 197 -6.174 -1.687 -0.566 IL 41 41 3 41 3 4 38 139 200 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - u - - - ML 42 41 3 44 3 4 37 138 198 -8.396 -0.018 -6.713 -0.458 -0.905 -0.201 0.902 D 43 41 3 44 3 0 33 136 197 -5.620 -0.734 -1.403 IL 44 44 3 44 3 3 37 138 199 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 114 - c - - MR 45 44 3 47 3 4 37 137 197 -8.396 -0.018 -6.713 -0.567 0.805 -1.011 0.114 D 46 44 3 47 3 0 31 135 195 -6.390 -1.568 -0.620 IR 47 47 3 47 3 3 36 137 198 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 113 - c - - MR 48 47 3 50 5 3 36 136 196 -4.129 -0.114 -6.947 -7.159 -8.051 -0.052 0.172 0.090 -0.244 D 49 47 3 50 5 0 30 134 194 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 2 34 136 196 -2.603 -0.424 -6.114 -4.281 -5.387 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 111 u a - - MP 51 50 3 55 6 5 35 135 195 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.421 -3.389 -3.377 0.282 -2.466 -4.022 2.214 -3.130 -3.387 0.499 -3.821 -1.427 2.447 -3.604 0.858 -2.295 ML 52 50 3 55 6 1 31 133 193 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 30 133 193 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 26 129 190 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 2 33 134 194 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 2 33 134 194 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 110 C G - - MP 57 56 6 61 6 4 34 133 193 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.231 -3.178 -3.249 0.331 -2.526 -3.938 3.049 -3.128 -0.826 0.544 -3.718 -1.286 1.114 -3.459 -0.291 -2.233 ML 58 56 6 61 6 1 30 131 192 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 29 131 191 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 26 128 189 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 31 132 193 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 31 132 192 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 109 a u - - MP 63 62 6 67 4 2 32 131 191 -6.995 -7.202 -0.051 -5.616 -3.055 -0.702 -3.128 2.422 -3.475 -4.044 0.601 -3.445 -3.180 2.278 -3.672 -0.058 0.348 -3.284 -1.228 -2.123 ML 64 62 6 67 4 1 29 130 190 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 27 129 189 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 25 128 188 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 31 131 191 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 30 130 191 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - G - - - ML 69 68 6 71 3 2 30 129 189 -8.008 -0.020 -6.662 0.211 -1.616 1.018 -1.024 D 70 68 6 71 3 0 25 126 187 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 29 129 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - C - - - ML 72 71 3 74 3 1 29 128 188 -8.008 -0.020 -6.662 -1.848 1.652 -2.675 -1.240 D 73 71 3 74 3 0 24 126 186 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 28 128 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - A - - - ML 75 74 3 77 3 1 28 127 187 -8.008 -0.020 -6.662 1.737 -2.460 -2.083 -2.011 D 76 74 3 77 3 0 23 125 185 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 28 127 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - A - - - ML 78 77 3 80 3 1 28 126 186 -8.396 -0.018 -6.713 1.440 -1.548 -1.472 -0.773 D 79 77 3 80 3 0 22 124 185 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 26 126 187 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 108 - C - - MR 81 80 3 83 3 1 27 125 185 -8.396 -0.018 -6.713 -1.229 1.349 -2.056 -0.349 D 82 80 3 83 3 0 20 123 183 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 25 125 186 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 107 - g - - MR 84 83 3 86 3 1 26 124 184 -8.396 -0.018 -6.713 0.535 -1.480 0.725 -0.889 D 85 83 3 86 3 0 19 122 182 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 25 124 185 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 106 - U - - MR 87 86 3 89 3 1 26 123 183 -8.396 -0.018 -6.713 -1.037 -0.670 -1.775 1.374 D 88 86 3 89 3 0 18 121 181 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 24 123 184 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 105 - C - - MR 90 89 3 92 5 1 25 122 182 -7.132 -0.038 -6.947 -7.159 -8.051 -1.848 1.652 -2.675 -1.240 D 91 89 3 92 5 0 17 120 180 -5.352 -0.707 -2.978 -4.409 -2.404 IR 92 92 3 92 5 1 22 122 182 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 104 g u - - MP 93 92 3 97 6 2 26 121 181 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.565 -2.362 -3.739 1.591 -4.579 -5.176 -0.199 -3.818 -3.430 1.378 -3.956 2.942 -0.472 -4.331 -2.125 -2.460 ML 94 92 3 97 6 1 19 119 179 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 3 97 6 1 19 118 179 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 3 97 6 0 14 115 175 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 21 120 181 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 21 120 180 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 103 G C - - MP 99 98 6 103 6 2 25 119 179 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.831 -3.137 -4.939 0.140 -5.358 -4.729 -0.701 -5.188 -4.386 3.659 -4.716 -0.839 -1.084 -4.526 -2.743 -3.814 ML 100 98 6 103 6 1 19 117 177 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 18 117 177 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 14 113 173 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 20 118 179 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 21 118 178 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 102 G C - - MP 105 104 6 109 6 2 24 117 177 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.831 -3.137 -4.939 0.140 -5.358 -4.729 -0.701 -5.188 -4.386 3.659 -4.716 -0.839 -1.084 -4.526 -2.743 -3.814 ML 106 104 6 109 6 1 18 115 175 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 18 115 175 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 13 111 172 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 20 116 177 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 20 116 176 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 101 U A - - MP 111 110 6 115 6 2 22 115 175 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.296 -4.123 -4.122 -0.411 -3.042 -4.677 1.289 -3.745 -4.126 -0.172 -4.494 -2.019 3.376 -4.443 -0.715 -2.939 ML 112 110 6 115 6 1 18 113 174 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 17 113 173 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 13 110 170 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 19 114 175 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 19 114 174 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 100 G C - - MP 117 116 6 121 6 2 20 113 173 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.831 -3.137 -4.939 0.140 -5.358 -4.729 -0.701 -5.188 -4.386 3.659 -4.716 -0.839 -1.084 -4.526 -2.743 -3.814 ML 118 116 6 121 6 1 17 111 172 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 15 111 171 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 13 109 169 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 18 112 173 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 18 112 172 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 99 c g - - MP 123 122 6 127 4 2 19 111 171 -6.995 -7.202 -0.051 -5.616 -3.388 -3.364 -3.352 0.294 -2.455 -4.003 2.337 -3.115 -3.361 0.500 -3.800 -1.414 2.163 -3.576 1.230 -2.276 ML 124 122 6 127 4 1 16 110 171 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 14 109 170 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 12 108 169 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 17 111 171 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 17 111 171 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 22 - u - - - ML 129 128 6 131 3 1 17 109 169 -8.396 -0.018 -6.713 -0.393 -0.979 0.403 0.494 D 130 128 6 131 3 0 12 107 168 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 16 109 170 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 98 - U - - MR 132 131 3 134 5 1 17 108 168 -7.132 -0.038 -6.947 -7.159 -8.051 -0.889 -0.305 -1.635 1.220 D 133 131 3 134 5 0 10 106 167 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 14 108 168 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 97 U A - - MP 135 134 3 139 6 2 17 107 167 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.484 -3.509 -3.472 0.046 -0.705 -4.135 1.573 -3.295 -3.492 0.203 -3.941 -1.652 3.054 -3.692 -0.399 -2.419 ML 136 134 3 139 6 1 12 105 165 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 11 105 165 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 7 101 162 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 13 106 167 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 13 106 166 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 96 G C - - MP 141 140 6 145 6 2 16 105 165 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.831 -3.137 -4.939 0.140 -5.358 -4.729 -0.701 -5.188 -4.386 3.659 -4.716 -0.839 -1.084 -4.526 -2.743 -3.814 ML 142 140 6 145 6 1 11 103 164 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 10 103 163 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 7 100 160 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 12 104 165 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 12 104 164 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 95 a u - - MP 147 146 6 151 6 2 14 103 163 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.432 -2.481 -3.530 2.955 -4.101 -4.870 0.132 -3.704 -3.410 1.483 -3.967 1.139 -0.125 -3.975 -1.759 -2.375 ML 148 146 6 151 6 1 10 101 162 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 9 101 162 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 6 99 159 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 11 102 163 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 11 102 163 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 94 C G - - MP 153 152 6 157 4 2 12 101 161 -6.995 -7.202 -0.051 -5.616 -4.050 -4.015 -3.828 -0.255 -2.622 -4.301 3.273 -3.391 -3.856 -0.030 -4.184 -2.018 0.975 -4.140 0.552 -2.708 ML 154 152 6 157 4 1 9 100 161 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 7 99 160 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 6 98 159 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 11 101 161 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 10 101 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 27 - U - - - ML 159 158 6 161 3 1 11 99 159 -8.396 -0.018 -6.713 -0.801 -0.020 -1.558 1.071 D 160 158 6 161 3 0 6 97 158 -5.620 -0.734 -1.403 IL 161 161 3 161 3 1 9 99 160 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 93 - A - - MR 162 161 3 164 5 1 11 98 158 -7.132 -0.038 -6.947 -7.159 -8.051 1.737 -2.460 -2.083 -2.011 D 163 161 3 164 5 0 4 96 157 -5.352 -0.707 -2.978 -4.409 -2.404 IR 164 164 3 164 5 1 8 98 158 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 28 92 C G - - MP 165 164 3 169 6 2 11 97 157 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.900 -3.869 -3.710 -0.129 -2.547 -4.210 3.133 -3.299 -3.733 0.089 -4.081 -1.885 1.065 -4.007 0.990 -2.595 ML 166 164 3 169 6 1 6 95 155 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 3 169 6 1 6 95 155 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 3 169 6 0 2 91 152 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 7 96 157 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 7 96 156 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 29 91 U A - - MP 171 170 6 175 6 2 10 95 155 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -4.296 -4.123 -4.122 -0.411 -3.042 -4.677 1.289 -3.745 -4.126 -0.172 -4.494 -2.019 3.376 -4.443 -0.715 -2.939 ML 172 170 6 175 6 1 6 93 154 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 5 93 153 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 2 90 150 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 7 94 155 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 7 94 155 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 30 90 A U - - MP 177 176 6 181 6 2 9 93 153 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.873 -2.883 -3.885 3.382 -4.264 -5.334 0.041 -3.922 -3.774 0.991 -4.325 -0.346 -0.376 -4.508 -1.899 -2.714 ML 178 176 6 181 6 1 5 91 152 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 4 91 152 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 2 89 149 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 6 92 153 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 6 92 153 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 31 89 c g - - MP 183 182 6 187 4 2 7 91 151 -6.995 -7.202 -0.051 -5.616 -3.787 -3.775 -3.622 -0.079 -2.506 -4.140 2.855 -3.244 -3.648 0.127 -4.009 -1.828 1.091 -3.909 1.753 -2.527 ML 184 182 6 187 4 1 4 90 151 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 4 1 3 89 150 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 186 182 6 187 4 0 2 88 149 -4.568 -4.250 -2.265 -0.520 IL 187 187 5 187 4 1 6 91 152 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 188 188 6 188 3 1 5 91 151 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - a - - - ML 189 188 6 191 3 1 6 89 149 -8.396 -0.018 -6.713 0.773 -0.921 -1.073 0.364 D 190 188 6 191 3 0 1 87 148 -5.620 -0.734 -1.403 IL 191 191 3 191 3 1 4 89 150 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 88 - U - - MR 192 191 3 194 5 1 5 88 148 -7.132 -0.038 -6.947 -7.159 -8.051 -1.567 -1.549 -2.305 1.641 D 193 191 3 194 5 0 0 86 147 -5.352 -0.707 -2.978 -4.409 -2.404 IR 194 194 3 194 5 1 3 88 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 33 87 A U - - MP 195 194 3 199 6 2 6 87 147 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.873 -2.883 -3.885 3.382 -4.264 -5.334 0.041 -3.922 -3.774 0.991 -4.325 -0.346 -0.376 -4.508 -1.899 -2.714 ML 196 194 3 199 6 1 2 85 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 3 199 6 1 2 85 145 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 3 199 6 0 0 82 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 3 86 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 3 86 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 34 86 c g - - MP 201 200 6 205 6 2 5 85 145 -9.126 -9.065 -0.021 -7.841 -8.121 -8.516 -3.697 -3.629 -3.578 0.119 -2.523 -4.156 2.651 -3.231 -3.587 0.365 -3.980 -1.602 2.369 -3.839 -0.195 -2.457 ML 202 200 6 205 6 1 2 83 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 2 83 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 81 141 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 2 84 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 2 84 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 35 85 C G - - MP 207 206 6 211 4 2 3 83 144 -6.995 -7.202 -0.051 -5.616 -4.082 -4.046 -3.854 -0.284 -2.640 -4.322 3.297 -3.412 -3.883 -0.058 -4.207 -2.048 0.953 -4.169 0.476 -2.733 ML 208 206 6 211 4 1 1 82 143 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 4 1 1 81 142 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 210 206 6 211 4 0 0 80 141 -4.568 -4.250 -2.265 -0.520 IL 211 211 5 211 4 1 2 83 144 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 212 212 6 212 3 1 1 83 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - C - - - ML 213 212 6 215 3 1 2 81 142 -8.008 -0.020 -6.662 -0.994 1.134 -1.814 0.028 D 214 212 6 215 3 0 0 79 139 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 82 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - g - - - ML 216 215 3 218 3 1 1 80 141 -8.008 -0.446 -1.933 0.284 -1.580 0.959 -0.988 D 217 215 3 218 3 0 0 78 139 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 81 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - A - - - ML 219 218 3 221 3 1 2 79 140 -7.589 -0.027 -6.243 1.089 -1.173 -0.366 -0.613 D 220 218 3 221 3 0 0 77 138 -7.940 -3.453 -0.145 IL 221 221 3 221 3 1 1 80 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 39 - A - - - ML 222 221 3 224 3 1 1 78 139 -7.589 -0.027 -6.243 1.063 -1.160 -0.320 -0.597 D 223 221 3 224 3 0 0 77 138 -7.940 -0.327 -2.332 IL 224 224 3 224 3 1 1 79 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 40 - u - - - ML 225 224 3 227 3 1 1 77 138 -8.008 -0.020 -6.662 -0.048 -0.334 0.026 0.289 D 226 224 3 227 3 0 0 75 136 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 78 139 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 41 - c - - - ML 228 227 3 230 3 1 1 76 137 -8.008 -0.020 -6.662 -0.408 0.526 -0.597 0.196 D 229 227 3 230 3 0 0 74 135 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 77 138 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 42 - a - - - ML 231 230 3 233 3 1 1 75 136 -8.008 -0.168 -3.234 0.256 -0.898 0.183 0.181 D 232 230 3 233 3 0 0 73 134 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 76 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 43 - a - - - ML 234 233 3 236 3 1 1 75 135 -7.862 -0.022 -6.516 0.495 -0.439 -0.944 0.416 D 235 233 3 236 3 0 0 72 133 -7.114 -2.627 -0.267 IL 236 236 3 236 3 1 1 75 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 44 - g - - - ML 237 236 3 239 3 1 1 74 134 -7.862 -0.022 -6.516 0.022 -0.160 0.316 -0.243 D 238 236 3 239 3 0 0 72 133 -7.114 -0.642 -1.506 IL 239 239 3 239 3 1 1 74 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 45 - c - - - ML 240 239 3 242 3 1 1 73 133 -8.008 -0.020 -6.662 -0.017 0.370 -1.156 0.346 D 241 239 3 242 3 0 0 70 131 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 73 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 46 - u - - - ML 243 242 3 245 3 1 1 72 132 -8.008 -0.020 -6.662 -0.080 -0.169 0.068 0.159 D 244 242 3 245 3 0 0 69 130 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 72 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 47 - a - - - ML 246 245 3 248 3 1 1 71 131 -8.008 -0.020 -6.662 0.799 -0.515 -0.327 -0.391 D 247 245 3 248 3 0 0 68 129 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 71 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 48 - u - - - ML 249 248 3 251 3 1 1 70 130 -8.008 -0.020 -6.662 0.228 -0.325 -0.347 0.315 D 250 248 3 251 3 0 0 67 128 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 70 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 49 - u - - - ML 252 251 3 254 3 1 1 69 129 -8.008 -0.020 -6.662 -0.092 -0.547 -1.208 0.960 D 253 251 3 254 3 0 0 66 127 -6.174 -1.687 -0.566 IL 254 254 3 254 3 1 1 69 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 50 - u - - - ML 255 254 3 257 3 1 1 68 128 -8.008 -0.020 -6.662 0.129 -0.141 -0.387 0.304 D 256 254 3 257 3 0 0 65 126 -6.174 -1.687 -0.566 IL 257 257 3 257 3 1 1 68 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 51 - a - - - ML 258 257 3 260 3 1 1 67 127 -8.008 -0.020 -6.662 0.864 -1.421 0.320 -0.842 D 259 257 3 260 3 0 0 65 125 -6.174 -1.687 -0.566 IL 260 260 3 260 3 1 1 67 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 52 - A - - - ML 261 260 3 263 3 1 1 66 126 -8.008 -0.455 -1.907 1.480 -1.790 -0.956 -1.299 D 262 260 3 263 3 0 0 64 124 -6.174 -1.687 -0.566 IL 263 263 3 263 3 1 1 67 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 53 - a - - - ML 264 263 3 266 3 1 1 65 126 -7.580 -0.027 -6.234 0.651 -0.725 -0.849 0.344 D 265 263 3 266 3 0 0 63 123 -7.959 -2.057 -0.404 IL 266 266 3 266 3 1 1 66 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 54 - U - - - ML 267 266 3 269 3 1 1 64 125 -7.682 -0.025 -6.336 -0.603 -0.320 -1.326 1.099 D 268 266 3 269 3 0 0 62 122 -7.725 -1.149 -0.878 IL 269 269 3 269 3 1 1 65 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 55 - g - - - ML 270 269 3 272 3 1 1 63 124 -7.862 -0.022 -6.516 -0.310 -0.724 0.767 -0.174 D 271 269 3 272 3 0 0 60 120 -7.114 -2.627 -0.267 IL 272 272 3 272 3 1 1 64 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 56 - c - - - ML 273 272 3 275 3 1 1 62 123 -7.862 -0.022 -6.516 -0.333 0.495 -0.079 -0.235 D 274 272 3 275 3 0 0 59 119 -7.114 -2.627 -0.267 IL 275 275 3 275 3 1 1 63 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 57 - a - - - ML 276 275 3 278 3 1 1 61 122 -7.862 -0.022 -6.516 0.718 -0.512 -0.947 0.183 D 277 275 3 278 3 0 0 57 118 -7.114 -2.627 -0.267 IL 278 278 3 278 3 1 1 62 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 58 - u - - - ML 279 278 3 281 3 1 1 60 121 -7.862 -0.113 -3.816 -0.226 -0.213 -0.111 0.440 D 280 278 3 281 3 0 0 56 117 -7.114 -2.627 -0.267 IL 281 281 3 281 3 1 1 61 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 59 - a - - - ML 282 281 3 284 3 1 1 59 120 -7.772 -0.024 -6.426 0.400 0.120 -0.945 0.103 D 283 281 3 284 3 0 0 55 115 -7.459 -2.972 -0.206 IL 284 284 3 284 3 1 1 60 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 60 - g - - - ML 285 284 3 287 3 1 1 59 119 -2.920 -0.571 -2.360 0.045 -0.875 0.411 0.129 D 286 284 3 287 3 0 0 54 114 -7.459 -1.557 -0.612 IL 287 287 3 287 3 1 1 63 123 -0.494 -1.881 -5.762 0.000 0.000 0.000 0.000 [ MATL 72 ] 69 - c - - - ML 288 287 3 290 3 1 1 55 116 -7.589 -0.027 -6.243 -0.528 0.812 -1.291 0.191 D 289 287 3 290 3 0 0 52 113 -7.940 -3.453 -0.145 IL 290 290 3 290 3 1 1 56 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 70 - g - - - ML 291 290 3 293 3 1 1 54 115 -7.589 -0.027 -6.243 -0.317 -1.086 0.889 -0.194 D 292 290 3 293 3 0 0 52 112 -7.940 -3.453 -0.145 IL 293 293 3 293 3 1 1 55 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 71 - c - - - ML 294 293 3 296 3 1 1 53 114 -7.589 -0.027 -6.243 -0.200 0.347 -0.537 0.224 D 295 293 3 296 3 0 0 52 112 -7.940 -0.327 -2.332 IL 296 296 3 296 3 1 1 54 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 72 - a - - - ML 297 296 3 299 3 1 1 52 113 -8.008 -0.020 -6.662 0.556 -0.275 -1.001 0.268 D 298 296 3 299 3 0 0 49 109 -6.174 -1.687 -0.566 IL 299 299 3 299 3 1 1 53 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 73 - c - - - ML 300 299 3 302 3 1 1 51 112 -8.008 -0.020 -6.662 -0.767 0.682 -1.562 0.555 D 301 299 3 302 3 0 0 47 107 -6.174 -1.687 -0.566 IL 302 302 3 302 3 1 1 52 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 77 ] 74 - G - - - ML 303 302 3 305 3 1 1 50 111 -2.178 -0.379 -6.662 -0.090 -1.785 1.222 -1.195 D 304 302 3 305 3 0 0 40 101 -6.174 -1.687 -0.566 IL 305 305 3 305 3 1 1 54 115 -0.441 -1.999 -6.271 0.000 0.000 0.000 0.000 [ MATL 78 ] 84 - u - - - ML 306 305 3 308 2 1 1 1 1 * 0.000 -0.745 0.544 -1.532 0.678 D 307 305 3 308 2 0 0 0 0 * 0.000 IL 308 308 3 308 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 79 ] - - - - - - E 309 308 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MIR1223 ACC RF01941 DESC microRNA MIR1223 LENG 102 MAXL 223 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 08:29:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01941/CM NSEQ 10 EFFN 3.041992 CKSUM 524510449 STATS LOCAL MSV -9.0241 0.71858 STATS LOCAL VITERBI -10.2301 0.71858 STATS LOCAL FORWARD -3.6095 0.71858 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42818 1.41148 1.36991 1.33810 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 0.00000 * 1 1.09874 1.28942 1.89236 1.42478 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 2 2.14060 2.28612 2.21023 0.39887 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 3 1.95616 2.36145 0.37791 2.53802 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 4 2.13072 3.18365 0.23139 3.07087 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 5 0.54709 2.34156 1.67411 1.98258 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 6 1.76056 1.97937 0.73421 1.56060 6 g - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 7 1.70314 1.35037 1.09479 1.49550 7 g - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 8 1.85020 2.15962 1.51232 0.67919 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 9 2.53487 1.20034 2.31129 0.65296 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 10 2.58000 0.48481 1.99457 1.75831 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 11 0.78843 2.45852 1.02467 2.29299 11 a - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 12 1.26053 2.75180 0.58330 2.35781 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 13 3.22179 0.13927 3.79290 2.69428 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 14 0.11100 3.55033 3.24504 3.28663 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 15 0.30506 2.68676 2.65453 2.08358 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 16 1.62515 3.25740 0.33316 3.03715 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 17 2.78877 3.55141 0.12862 3.48969 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 18 2.78846 3.55100 0.12867 3.48914 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 19 3.34151 2.18711 3.13008 0.21238 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 20 2.78718 3.54929 0.12890 3.48680 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 21 2.51909 1.09381 2.29888 0.72534 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 22 1.78937 2.20464 1.02537 1.01065 22 u - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 23 2.81009 1.56810 2.62231 0.41745 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 24 2.78891 3.55160 0.12859 3.48996 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 25 0.52150 2.99576 1.22020 2.79361 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 26 2.99914 0.38532 2.78525 1.56915 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 27 2.15753 1.38144 2.69655 0.56963 27 U - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 28 2.91847 0.47430 2.70361 1.35985 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 29 3.34396 2.18732 3.13129 0.21217 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 30 0.23402 3.16643 2.11549 3.08074 30 A - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 31 2.90783 0.67824 2.70177 0.99207 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 32 0.79477 2.14716 2.25754 1.11813 32 a - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 33 0.23399 3.16659 2.11553 3.08097 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 34 2.69227 0.84427 2.45282 0.87622 34 c - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 35 3.02156 0.36994 2.80766 1.60867 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 36 2.34992 0.48513 2.94887 1.44134 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 37 1.19795 2.72170 0.62585 2.32669 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.38564 4.02070 1.19717 1.46634 0.26236 1.09861 0.40547 38 0.55461 2.34441 1.66162 1.96632 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05142 3.68648 3.68648 1.46634 0.26236 2.93578 0.05455 39 0.57387 2.33193 1.62232 1.95117 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05142 3.68648 3.68648 1.46634 0.26236 0.11225 2.24263 40 1.46347 1.61802 1.31861 1.19479 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 41 1.79438 0.92977 1.82067 1.28299 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 42 1.21503 2.10357 1.20696 1.26524 42 g - - _ 1.38629 1.38629 1.38629 1.38629 0.15596 4.02070 2.06775 1.46634 0.26236 1.09861 0.40547 43 1.00979 1.71424 2.12752 1.08924 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04108 3.90582 3.90582 1.46634 0.26236 2.20270 0.11710 44 1.42704 1.47099 1.07902 1.65887 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04108 3.90582 3.90582 1.46634 0.26236 0.24975 1.50956 45 1.43395 1.05124 2.31921 1.15907 45 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 46 1.49645 1.47959 1.28393 1.30417 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 47 0.77942 1.75212 1.61944 1.77247 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 48 1.22809 1.61386 1.62044 1.17048 48 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 49 1.49177 1.82874 2.36043 0.65387 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 50 1.30890 1.46318 1.64939 1.18346 50 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 51 0.72625 2.59498 1.10432 2.20550 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 52 0.28111 2.90714 2.15005 2.60448 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.39359 4.02070 1.17952 1.46634 0.26236 1.09861 0.40547 53 0.89797 1.95602 2.05803 1.12862 53 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05182 3.67894 3.67894 1.46634 0.26236 1.46235 0.26356 54 1.97618 1.64725 2.48916 0.53470 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04759 3.76208 3.76208 1.46634 0.26236 0.71873 0.66821 55 1.73181 1.95250 0.73621 1.59853 55 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04108 3.90582 3.90582 1.46634 0.26236 2.20270 0.11710 56 1.75936 0.93237 1.39907 1.67451 56 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04108 3.90582 3.90582 1.46634 0.26236 2.20270 0.11710 57 0.83547 1.77111 2.14143 1.27763 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04108 3.90582 3.90582 1.46634 0.26236 2.20270 0.11710 58 1.61883 1.52062 1.42133 1.07323 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.11580 3.90582 2.41660 1.46634 0.26236 2.20270 0.11710 59 1.08868 1.24762 2.13846 1.35356 59 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04420 3.83422 3.83422 1.46634 0.26236 2.52438 0.08350 60 1.39594 2.08323 1.02467 1.31321 60 g - - _ 1.38629 1.38629 1.38629 1.38629 0.53021 1.72414 1.45590 2.04378 0.13873 1.03515 0.43877 61 1.92002 0.69963 2.47060 1.30162 69 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05142 3.68648 3.68648 1.46634 0.26236 2.93578 0.05455 62 1.74350 2.29025 0.64946 1.60184 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05142 3.68648 3.68648 1.46634 0.26236 2.93578 0.05455 63 1.60548 1.06497 1.77641 1.25448 71 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05142 3.68648 3.68648 1.46634 0.26236 0.11225 2.24263 64 0.96302 1.57277 2.17917 1.21181 72 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 65 2.12556 0.81618 2.70318 0.99014 73 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 66 1.52019 2.89563 0.43936 2.50570 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.35024 1.28178 4.02070 1.85915 0.16937 1.09861 0.40547 67 2.10375 0.92222 2.67293 0.88839 84 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 68 2.16723 2.96981 0.25846 2.78141 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 69 0.98048 2.62250 0.76247 2.45650 86 g - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 70 3.31851 2.44845 2.98129 0.19039 87 U - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 71 2.90571 2.82034 3.43336 0.15850 88 U - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 72 2.08891 2.86365 0.28780 2.67061 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 73 3.30722 2.44671 2.97653 0.19136 90 U - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 74 0.24008 3.32571 2.02435 3.09204 91 A - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 75 2.09437 2.87017 0.28526 2.68322 92 G - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 76 0.11100 3.55033 3.24504 3.28663 93 A - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 77 2.14954 2.94687 0.26452 2.75853 94 G - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 78 3.00666 1.95075 2.79099 0.29167 95 U - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 79 3.68979 0.15290 3.39913 2.48408 96 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 80 0.40896 2.79358 1.61152 2.59197 97 A - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 81 2.24269 1.62945 2.77093 0.45384 98 U - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 82 1.13228 2.46832 0.70936 2.29244 99 g - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 83 3.67384 0.15395 3.39166 2.48112 100 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 84 0.24070 3.32116 2.02366 3.08691 101 A - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 85 3.68264 0.15336 3.39579 2.48276 102 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 86 3.68959 0.15291 3.39904 2.48405 103 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 87 3.24689 2.08194 3.05065 0.23688 104 U - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 88 3.22179 0.13927 3.79290 2.69428 105 C - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 89 2.38276 1.95626 2.90208 0.34051 106 U - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 90 0.98868 2.63915 0.79790 2.24210 107 g - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 91 2.58469 0.33479 3.18249 1.78612 108 C - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 92 2.52482 1.04975 2.26177 0.76414 109 u - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 93 1.73886 2.53789 0.43048 2.35334 110 G - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 94 0.91140 2.47960 0.88022 2.30689 111 g - - > 1.38629 1.38629 1.38629 1.38629 0.11148 2.43553 4.02070 0.36909 1.17559 1.09861 0.40547 95 1.48636 1.20439 1.25798 1.66229 113 c - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 96 1.94792 0.71809 2.18349 1.35830 114 c - - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 97 1.86910 0.99951 1.78036 1.17408 115 c - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 98 2.45511 1.68177 2.15150 0.49136 116 U - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 99 3.29718 0.26790 3.01111 1.90521 117 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 100 2.78772 0.38771 2.48419 1.73479 118 C - - > 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 101 1.05686 2.04528 1.62128 1.12250 119 a - - : 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 102 3.01286 3.92972 0.10419 3.50177 120 G - - : 1.38629 1.38629 1.38629 1.38629 0.01844 4.00260 * 1.46634 0.26236 0.00000 * //