INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-1251 ACC RF01938 DESC microRNA mir-1251 STATES 202 NODES 49 CLEN 66 W 82 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 04:12:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01938/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 1.603027 CKSUM 2958127241 NULL 0.000 0.000 0.000 0.000 GA 81.00 TC 81.60 NC 69.20 EFP7GF -7.5650 0.71915 ECMLC 0.69149 -4.86160 3.24393 1600000 326098 0.003680 ECMGC 0.45420 -15.01645 -2.59113 1600000 112988 0.003540 ECMLI 0.69346 -3.00234 4.50260 1600000 218474 0.005493 ECMGI 0.51420 -9.77042 0.42547 1600000 75677 0.005286 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 102 -6.808 -7.015 -0.312 -2.490 IL 1 1 2 1 4 1 20 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 20 82 102 -7.612 -0.026 -6.266 -0.870 -0.983 -1.562 1.383 D 4 2 3 5 3 0 14 80 100 -7.316 -2.829 -0.229 IL 5 5 3 5 3 1 19 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 19 81 101 -7.612 -0.026 -6.266 -0.840 -1.925 1.472 -1.311 D 7 5 3 8 3 0 13 79 99 -7.316 -2.829 -0.229 IL 8 8 3 8 3 1 19 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 18 80 100 -8.029 -0.023 -6.346 -0.840 -1.925 1.472 -1.311 D 10 8 3 11 3 0 13 78 98 -6.414 -1.528 -0.641 IL 11 11 3 11 3 1 18 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 66 - U - - MR 12 11 3 14 3 1 18 79 99 -8.029 -0.023 -6.346 -0.870 -0.983 -1.562 1.383 D 13 11 3 14 3 0 12 77 97 -7.401 -2.579 -0.274 IR 14 14 3 14 3 1 17 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 65 - A - - MR 15 14 3 17 3 1 17 78 98 -8.029 -0.023 -6.346 1.515 -1.681 -1.382 -1.164 D 16 14 3 17 3 0 12 76 96 -7.401 -2.579 -0.274 IR 17 17 3 17 3 1 16 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 64 - C - - MR 18 17 3 20 3 1 16 77 97 -8.029 -0.023 -6.346 -0.938 1.309 -1.719 -0.521 D 19 17 3 20 3 0 12 75 95 -7.401 -2.579 -0.274 IR 20 20 3 20 3 1 16 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 63 - A - - MR 21 20 3 23 3 1 15 76 96 -8.029 -0.023 -6.346 1.515 -1.681 -1.382 -1.164 D 22 20 3 23 3 0 11 75 95 -7.401 -0.575 -1.631 IR 23 23 3 23 3 1 14 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 62 - G - - MR 24 23 3 26 3 1 14 75 95 -8.234 -0.020 -6.551 -1.303 -2.477 1.651 -1.862 D 25 23 3 26 3 0 9 74 93 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 14 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 61 - A - - MR 27 26 3 29 5 1 13 74 94 -6.981 -0.042 -6.796 -7.008 -7.900 1.656 -2.111 -1.770 -1.629 D 28 26 3 29 5 0 9 73 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 29 29 3 29 5 1 12 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 4 60 A U - - MP 30 29 3 34 6 2 13 73 93 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 31 29 3 34 6 1 10 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 8 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 6 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 11 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 11 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 59 C G - - MP 36 35 6 40 4 2 11 71 91 -6.808 -7.015 -0.059 -5.429 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 37 35 6 40 4 1 9 71 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 4 1 7 71 91 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 39 35 6 40 4 0 5 70 90 -4.568 -4.250 -2.265 -0.520 IL 40 40 5 40 4 1 10 73 93 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 41 41 6 41 3 1 10 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 6 - U - - - ML 42 41 6 44 3 1 9 69 88 -8.234 -0.020 -6.551 -1.250 -1.289 -1.970 1.543 D 43 41 6 44 3 0 5 68 87 -5.620 -0.734 -1.403 IL 44 44 3 44 3 1 8 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 58 - U - - MR 45 44 3 47 5 1 8 68 87 -6.981 -0.042 -6.796 -7.008 -7.900 -1.250 -1.289 -1.970 1.543 D 46 44 3 47 5 0 3 66 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 47 47 3 47 5 1 6 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 57 C G - - MP 48 47 3 52 6 2 8 67 86 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 49 47 3 52 6 1 4 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 3 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 1 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 5 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 5 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 56 U A - - MP 54 53 6 58 4 2 6 65 84 -6.808 -7.015 -0.059 -5.429 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 55 53 6 58 4 1 3 65 85 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 2 65 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 64 83 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 5 66 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 4 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 9 - A - - - ML 60 59 6 62 3 1 5 62 82 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 61 59 6 62 3 0 0 61 81 -5.620 -0.734 -1.403 IL 62 62 3 62 3 1 3 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 55 - C - - MR 63 62 3 65 5 1 5 61 81 -6.981 -0.042 -6.796 -7.008 -7.900 -1.431 1.529 -2.242 -0.909 D 64 62 3 65 5 0 0 60 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 65 65 3 65 5 1 2 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 10 54 G C - - MP 66 65 3 70 6 2 6 60 80 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.492 -2.976 -4.571 0.364 -4.880 -4.594 -0.306 -4.793 -4.160 3.572 -4.515 -0.667 -0.699 -4.303 -2.330 -3.452 ML 67 65 3 70 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 3 70 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 3 70 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 2 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 11 53 C G - - MP 72 71 6 76 6 2 5 58 78 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 73 71 6 76 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 2 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 12 52 U A - - MP 78 77 6 82 6 2 4 56 76 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 79 77 6 82 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 13 51 G C - - MP 84 83 6 88 4 2 2 54 74 -6.808 -7.015 -0.059 -5.429 -3.946 -2.674 -3.991 0.786 -4.517 -4.444 0.005 -4.314 -3.845 3.332 -4.244 0.469 -0.296 -3.916 -1.980 -2.894 ML 85 83 6 88 4 1 1 55 74 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 54 74 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 53 73 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 1 56 76 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - c - - - ML 90 89 6 92 3 1 2 52 71 -7.835 -0.023 -6.489 -0.180 0.942 -1.353 -0.314 D 91 89 6 92 3 0 0 50 70 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 15 - C - - - ML 93 92 3 95 3 1 1 51 70 -7.835 -0.023 -6.489 -1.431 1.529 -2.242 -0.909 D 94 92 3 95 3 0 0 49 69 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 16 - A - - - ML 96 95 3 98 3 1 1 50 69 -8.234 -0.020 -6.551 1.170 -1.133 -1.133 -0.256 D 97 95 3 98 3 0 0 48 67 -5.620 -0.734 -1.403 IL 98 98 3 98 3 1 1 50 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 50 - U - - MR 99 98 3 101 3 1 1 49 68 -8.234 -0.020 -6.551 -1.250 -1.289 -1.970 1.543 D 100 98 3 101 3 0 0 47 66 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 49 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 49 - C - - MR 102 101 3 104 3 1 1 48 67 -8.234 -0.020 -6.551 -1.431 1.529 -2.242 -0.909 D 103 101 3 104 3 0 0 46 65 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 48 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 48 - G - - MR 105 104 3 107 5 1 1 47 66 -6.981 -0.042 -6.796 -7.008 -7.900 -0.134 -1.648 1.193 -1.047 D 106 104 3 107 5 0 0 45 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 47 A U - - MP 108 107 3 112 6 2 2 46 65 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 109 107 3 112 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 46 A U - - MP 114 113 6 118 6 2 2 44 63 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 115 113 6 118 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 45 g u - - MP 120 119 6 124 6 2 2 42 61 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.455 -2.289 -3.608 1.227 -4.191 -4.921 0.170 -3.654 -3.316 1.575 -3.829 2.891 -0.191 -4.160 -1.770 -2.344 ML 121 119 6 124 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 44 G C - - MP 126 125 6 130 6 2 2 40 59 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.492 -2.976 -4.571 0.364 -4.880 -4.594 -0.306 -4.793 -4.160 3.572 -4.515 -0.667 -0.699 -4.303 -2.330 -3.452 ML 127 125 6 130 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 21 43 C G - - MP 132 131 6 136 6 2 2 38 57 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 133 131 6 136 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 22 42 G C - - MP 138 137 6 142 6 2 2 36 55 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.492 -2.976 -4.571 0.364 -4.880 -4.594 -0.306 -4.793 -4.160 3.572 -4.515 -0.667 -0.699 -4.303 -2.330 -3.452 ML 139 137 6 142 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 23 41 C G - - MP 144 143 6 148 6 2 2 34 53 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 145 143 6 148 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 24 40 U A - - MP 150 149 6 154 6 2 2 32 51 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 151 149 6 154 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 31 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 25 39 u g - - MP 156 155 6 160 4 2 2 30 49 -6.808 -7.015 -0.059 -5.429 -3.831 -3.740 -3.592 -0.101 -2.434 -4.061 1.845 -3.181 -3.630 0.138 -3.950 -1.749 1.034 -3.940 2.820 -2.515 ML 157 155 6 160 4 1 1 30 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 159 155 6 160 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 160 160 5 160 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - C - - - ML 162 161 6 164 3 1 1 27 46 -8.234 -0.020 -6.551 -1.431 1.529 -2.242 -0.909 D 163 161 6 164 3 0 0 26 44 -5.620 -0.734 -1.403 IL 164 164 3 164 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 38 - A - - MR 165 164 3 167 3 1 1 26 45 -8.234 -0.020 -6.551 1.235 -0.808 -1.158 -0.675 D 166 164 3 167 3 0 0 24 43 -6.390 -1.568 -0.620 IR 167 167 3 167 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 37 - c - - MR 168 167 3 170 3 1 1 25 44 -8.234 -0.020 -6.551 -0.180 0.942 -1.353 -0.314 D 169 167 3 170 3 0 0 23 42 -6.390 -1.568 -0.620 IR 170 170 3 170 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 36 - A - - MR 171 170 3 173 5 1 1 24 43 -6.981 -0.042 -6.796 -7.008 -7.900 1.656 -2.111 -1.770 -1.629 D 172 170 3 173 5 0 0 23 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 173 173 3 173 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 27 35 U A - - MP 174 173 3 178 6 2 2 23 42 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 175 173 3 178 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 3 178 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 3 178 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 28 34 C G - - MP 180 179 6 184 4 2 2 21 40 -6.808 -7.015 -0.059 -5.429 -3.662 -3.686 -3.590 -0.097 -0.304 -4.187 3.248 -3.361 -3.627 0.072 -4.023 -1.817 0.922 -3.845 -0.416 -2.560 ML 181 179 6 184 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 184 184 5 184 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 29 - C - - - ML 186 185 6 188 3 1 1 18 36 -7.835 -0.023 -6.489 -0.831 1.068 -1.630 0.025 D 187 185 6 188 3 0 0 17 36 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 30 - U - - - ML 189 188 3 191 3 1 1 16 35 -7.835 -0.023 -6.489 -1.250 -1.289 -1.970 1.543 D 190 188 3 191 3 0 0 16 34 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 31 - U - - - ML 192 191 3 194 3 1 1 15 33 -7.835 -0.023 -6.489 -1.250 -1.289 -1.970 1.543 D 193 191 3 194 3 0 0 15 33 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 32 - C - - - ML 195 194 3 197 3 1 1 13 32 -7.835 -0.023 -6.489 -1.431 1.529 -2.242 -0.909 D 196 194 3 197 3 0 0 13 32 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 33 - U - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 -1.250 -1.289 -1.970 1.543 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-1251 ACC RF01938 DESC microRNA mir-1251 LENG 66 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 04:12:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01938/CM NSEQ 7 EFFN 2.231934 CKSUM 2958127241 STATS LOCAL MSV -8.0897 0.71915 STATS LOCAL VITERBI -8.6871 0.71915 STATS LOCAL FORWARD -3.7069 0.71915 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51123 1.30804 1.39662 1.34102 1.38629 1.38629 1.38629 1.38629 0.23424 3.87142 1.67131 1.46634 0.26236 0.00000 * 1 2.22181 2.25429 2.71908 0.32753 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 2.40026 0.09507 2 2.25240 3.05981 0.25344 2.63346 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 2.40026 0.09507 3 2.25240 3.05981 0.25344 2.63346 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 0.20015 1.70711 4 0.36568 2.70426 1.78510 2.63698 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 5 3.13690 0.25450 2.90752 2.06617 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 6 2.56000 2.53250 3.07531 0.22682 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 7 3.13969 0.25418 2.90882 2.06665 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 8 2.91070 1.85911 2.65397 0.32937 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 9 0.16421 3.18586 2.91519 2.88424 9 A - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 10 2.55024 3.18428 0.17846 3.12420 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 11 3.14261 0.25384 2.91019 2.06715 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 12 2.91114 1.85913 2.65416 0.32931 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 13 2.18948 2.87153 0.26491 2.74672 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 14 1.59451 0.61777 2.51237 1.73290 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 15 2.78151 0.21492 3.35684 2.33711 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 16 0.50868 2.28894 2.30311 1.62258 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 17 0.36502 2.70659 1.78548 2.64039 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 18 0.36475 2.70750 1.78563 2.64173 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 19 1.89567 2.84459 0.32059 2.71961 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 20 2.55108 3.18524 0.17826 3.12555 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 21 3.14112 0.25401 2.90949 2.06689 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 22 2.55029 3.18433 0.17845 3.12428 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 23 3.13945 0.25420 2.90871 2.06661 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 24 2.90796 1.85898 2.65280 0.32972 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 25 2.88916 1.55067 2.67455 0.41048 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 26 2.78151 0.21492 3.35684 2.33711 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 27 2.90696 1.85893 2.65237 0.32984 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 28 2.79668 0.34394 2.60362 1.85782 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 29 2.16258 0.54011 2.73864 1.43704 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 30 2.56000 2.53250 3.07532 0.22682 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 31 2.56000 2.53250 3.07531 0.22682 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 32 2.78151 0.21492 3.35684 2.33711 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 33 2.56000 2.53250 3.07532 0.22682 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 34 1.75258 2.77044 0.37364 2.57946 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 35 0.37296 2.84107 1.69635 2.66509 35 A - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 36 0.16421 3.18586 2.91519 2.88424 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 37 1.59451 0.61777 2.51237 1.73290 37 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 38 0.45473 1.99953 2.34038 2.01222 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 39 2.08518 2.85076 0.29289 2.63374 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 40 0.37422 2.83569 1.69589 2.65841 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 41 2.34307 3.07604 0.21974 2.89861 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 42 3.32950 0.21076 3.01838 2.25060 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 43 2.34408 3.07739 0.21943 2.90024 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 44 3.33379 0.21035 3.02024 2.25141 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 45 2.93511 1.86350 2.64581 0.32740 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 46 2.87528 2.07417 2.52207 0.30429 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 47 2.87844 2.07452 2.52323 0.30386 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 48 1.55534 2.73572 0.46713 2.33061 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 49 2.78151 0.21492 3.35684 2.33711 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 50 2.56000 2.53250 3.07532 0.22682 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 51 2.97393 0.37785 2.69094 1.63093 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 52 0.37352 2.83869 1.69615 2.66213 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 53 2.34705 3.08136 0.21852 2.90510 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 54 3.34713 0.20909 3.02600 2.25395 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 55 2.78151 0.21492 3.35684 2.33711 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 56 0.37326 2.83981 1.69624 2.66352 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 57 2.34862 3.08346 0.21804 2.90766 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 58 2.56000 2.53250 3.07532 0.22682 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 59 2.34600 3.07995 0.21884 2.90337 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 60 2.87630 2.07428 2.52245 0.30415 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 61 0.16421 3.18586 2.91519 2.88424 61 A - - : 1.38629 1.38629 1.38629 1.38629 0.04255 3.87142 3.87142 1.46634 0.26236 1.09861 0.40547 62 2.64511 3.51526 0.15806 3.09078 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.23424 3.87142 1.67131 1.46634 0.26236 1.09861 0.40547 63 0.24772 2.81536 2.58185 2.47813 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 2.40026 0.09507 64 2.33760 0.34137 2.89800 1.98407 64 C - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 2.40026 0.09507 65 0.24772 2.81536 2.58185 2.47813 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68850 3.68850 1.46634 0.26236 2.40026 0.09507 66 2.22181 2.25429 2.71908 0.32753 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.02599 3.66317 * 1.46634 0.26236 0.00000 * //