INFERNAL1/a [1.1.5 | Sep 2023] NAME bxd_7 ACC RF01935 DESC Bithoraxoid conserved region 7 STATES 202 NODES 68 CLEN 66 W 150 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 20:24:21 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01935/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.598633 CKSUM 4161709003 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 91.00 NC 44.40 EFP7GF -8.7462 0.71882 ECMLC 0.69081 -8.83285 0.40435 1600000 708752 0.001693 ECMGC 0.35716 -19.59687 -3.73804 1600000 115334 0.003468 ECMLI 0.53224 -8.85225 2.05098 1600000 397614 0.003018 ECMGI 0.42859 -9.54986 2.48681 1600000 69580 0.005749 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 150 234 -7.199 -7.406 -0.045 -5.820 IL 1 1 2 1 4 1 23 152 236 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 22 152 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 22 150 234 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 4 2 3 5 3 0 17 147 231 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 24 156 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 21 149 233 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 7 5 3 8 3 0 17 146 230 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 23 155 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 20 148 232 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 10 8 3 11 3 0 16 144 228 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 22 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 20 146 230 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 13 11 3 14 3 0 15 143 227 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 21 153 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 19 145 229 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 16 14 3 17 3 0 14 142 225 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 21 151 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 18 144 227 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 19 17 3 20 3 0 14 140 224 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 20 150 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 18 142 226 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 22 20 3 23 3 0 13 139 222 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 19 149 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 17 141 224 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 25 23 3 26 3 0 12 138 221 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 19 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 16 140 223 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 28 26 3 29 3 0 12 136 219 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 18 146 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 15 138 221 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 31 29 3 32 3 0 11 135 218 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 17 145 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 15 137 220 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 34 32 3 35 3 0 10 134 216 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 16 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 36 35 3 38 3 1 14 136 218 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 37 35 3 38 3 0 9 132 215 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 16 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 13 134 217 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 40 38 3 41 3 0 9 131 213 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 15 141 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 13 133 215 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 43 41 3 44 3 0 8 130 212 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 14 139 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 12 132 214 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 46 44 3 47 3 0 7 128 210 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 14 138 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 1 11 130 212 -2.327 -0.359 -5.585 -1.942 1.638 -2.142 -1.318 D 49 47 3 50 3 0 7 127 209 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 12 130 212 -5.463 -0.033 -13.107 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - C - - - ML 51 50 3 53 3 1 11 129 211 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 52 50 3 53 3 0 6 126 207 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 12 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 1 10 128 209 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 55 53 3 56 3 0 5 124 206 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 12 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 57 56 3 59 3 1 9 126 208 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 58 56 3 59 3 0 5 123 204 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 11 133 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - A - - - ML 60 59 3 62 3 1 9 125 206 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 61 59 3 62 3 0 4 122 203 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 10 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 63 62 3 65 3 1 8 124 205 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 64 62 3 65 3 0 4 120 201 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 10 130 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 66 65 3 68 3 1 8 122 203 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 67 65 3 68 3 0 3 119 200 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 9 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - A - - - ML 69 68 3 71 3 1 7 121 202 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 70 68 3 71 3 0 2 118 198 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 8 127 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - U - - - ML 72 71 3 74 3 1 6 119 200 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 73 71 3 74 3 0 2 116 197 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 8 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - U - - - ML 75 74 3 77 3 1 6 118 199 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 76 74 3 77 3 0 1 115 195 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 7 125 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - G - - - ML 78 77 3 80 3 1 5 117 197 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 79 77 3 80 3 0 1 113 193 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 7 123 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - A - - - ML 81 80 3 83 3 1 5 115 195 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 82 80 3 83 3 0 0 112 192 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 6 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - C - - - ML 84 83 3 86 3 1 4 114 194 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 85 83 3 86 3 0 0 111 190 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 6 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - U - - - ML 87 86 3 89 3 1 4 112 192 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 88 86 3 89 3 0 0 109 189 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 5 119 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - U - - - ML 90 89 3 92 3 1 3 111 191 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 91 89 3 92 3 0 0 108 187 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 5 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - U - - - ML 93 92 3 95 3 1 3 110 189 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 94 92 3 95 3 0 0 106 185 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 4 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - U - - - ML 96 95 3 98 3 1 2 108 187 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 97 95 3 98 3 0 0 105 184 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - U - - - ML 99 98 3 101 3 1 2 107 186 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 100 98 3 101 3 0 0 103 182 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 3 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - G - - - ML 102 101 3 104 3 1 2 105 184 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 103 101 3 104 3 0 0 102 180 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 3 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - A - - - ML 105 104 3 107 3 1 1 104 183 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 106 104 3 107 3 0 0 100 179 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - C - - - ML 108 107 3 110 3 1 1 102 181 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 109 107 3 110 3 0 0 99 177 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 2 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - U - - - ML 111 110 3 113 3 1 1 101 179 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 112 110 3 113 3 0 0 98 175 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 114 113 3 116 3 1 1 99 178 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 115 113 3 116 3 0 0 96 174 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - U - - - ML 117 116 3 119 3 1 1 98 176 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 118 116 3 119 3 0 0 95 172 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - G - - - ML 120 119 3 122 3 1 1 97 174 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 121 119 3 122 3 0 0 93 170 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - a - - - ML 123 122 3 125 3 1 1 95 172 -5.585 -0.061 -5.585 0.762 -1.247 0.426 -0.893 D 124 122 3 125 3 0 0 92 169 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - A - - - ML 126 125 3 128 3 1 1 94 171 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 127 125 3 128 3 0 0 90 167 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - c - - - ML 129 128 3 131 3 1 1 92 169 -5.585 -0.061 -5.585 -1.188 0.910 -1.366 0.372 D 130 128 3 131 3 0 0 88 165 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - u - - - ML 132 131 3 134 3 1 1 90 167 -5.585 -0.061 -5.585 -1.102 0.280 -1.274 0.931 D 133 131 3 134 3 0 0 87 163 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 135 134 3 137 3 1 1 89 165 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 136 134 3 137 3 0 0 85 161 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - C - - - ML 138 137 3 140 3 1 1 87 164 -2.327 -0.359 -5.585 -1.942 1.638 -2.142 -1.318 D 139 137 3 140 3 0 0 83 159 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 2 89 166 -0.583 -1.589 -14.664 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - u - - - ML 141 140 3 143 3 1 1 85 161 -5.585 -0.061 -5.585 0.147 0.095 -0.765 0.306 D 142 140 3 143 3 0 0 82 157 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - u - - - ML 144 143 3 146 3 1 1 84 159 -5.585 -0.061 -5.585 -1.104 0.254 -1.276 0.948 D 145 143 3 146 3 0 0 80 155 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - u - - - ML 147 146 3 149 3 1 1 82 158 -5.585 -0.061 -5.585 -0.801 -0.912 0.177 0.819 D 148 146 3 149 3 0 0 78 153 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - G - - - ML 150 149 3 152 3 1 1 80 156 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 151 149 3 152 3 0 0 77 152 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 88 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - U - - - ML 153 152 3 155 3 1 1 79 154 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 154 152 3 155 3 0 0 75 150 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - c - - - ML 156 155 3 158 3 1 1 77 152 -5.585 -0.061 -5.585 -0.926 0.762 0.204 -0.676 D 157 155 3 158 3 0 0 73 148 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - G - - - ML 159 158 3 161 3 1 1 75 150 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 160 158 3 161 3 0 0 72 146 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - C - - - ML 162 161 3 164 3 1 1 74 148 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 163 161 3 164 3 0 0 70 143 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - A - - - ML 165 164 3 167 3 1 1 72 146 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 166 164 3 167 3 0 0 68 141 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - G - - - ML 168 167 3 170 3 1 1 70 144 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 169 167 3 170 3 0 0 66 139 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - G - - - ML 171 170 3 173 3 1 1 68 142 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 172 170 3 173 3 0 0 64 137 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - U - - - ML 174 173 3 176 3 1 1 67 139 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 175 173 3 176 3 0 0 62 134 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - C - - - ML 177 176 3 179 3 1 1 65 137 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 178 176 3 179 3 0 0 60 132 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - G - - - ML 180 179 3 182 3 1 1 63 134 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 181 179 3 182 3 0 0 58 129 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 65 - U - - - ML 183 182 3 185 3 1 1 60 132 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 184 182 3 185 3 0 0 55 126 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 66 - U - - - ML 186 185 3 188 3 1 1 58 129 -5.585 -0.061 -5.585 -1.691 -1.360 -1.852 1.596 D 187 185 3 188 3 0 0 53 123 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 67 - G - - - ML 189 188 3 191 3 1 1 56 126 -5.585 -0.061 -5.585 -1.750 -2.507 1.728 -2.223 D 190 188 3 191 3 0 0 49 119 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 68 - A - - - ML 192 191 3 194 3 1 1 53 122 -5.585 -0.061 -5.585 1.711 -2.218 -1.959 -1.973 D 193 191 3 194 3 0 0 45 114 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 69 - C - - - ML 195 194 3 197 3 1 1 48 118 -5.585 -0.061 -5.585 -1.942 1.638 -2.142 -1.318 D 196 194 3 197 3 0 0 32 101 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 70 - U - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 -1.691 -1.360 -1.852 1.596 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME bxd_7 ACC RF01935 DESC Bithoraxoid conserved region 7 LENG 66 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Mon Jul 8 20:24:21 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01935/CM NSEQ 3 EFFN 2.598633 CKSUM 4161709003 STATS LOCAL MSV -8.0579 0.71882 STATS LOCAL VITERBI -8.8194 0.71882 STATS LOCAL FORWARD -3.7081 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.53837 1.66808 1.41844 1.03685 1.38629 1.38629 1.38629 1.38629 0.02535 4.98994 4.00476 0.39730 1.11515 0.00000 * 1 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 2 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 3 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 4 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 5 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 6 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 7 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 8 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 9 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 10 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 11 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 12 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 13 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 14 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 15 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 16 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.24864 1.61294 3.87092 0.02293 3.78688 1.09861 0.40547 17 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 18 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 19 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 20 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 21 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 22 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 23 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 24 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 25 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 26 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 27 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 28 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 29 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 30 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 31 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 32 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 33 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 34 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 35 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 36 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 37 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 38 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 39 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 40 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 41 0.85789 2.25087 1.09073 2.00495 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 42 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 43 2.20942 0.75551 2.33329 1.12860 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 44 2.14998 1.19212 2.26958 0.74112 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 45 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 46 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.24864 1.61294 3.87092 1.10170 0.40392 1.09861 0.40547 47 1.28406 1.32051 1.91655 1.17449 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 48 2.15123 1.21024 2.27083 0.72918 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 49 1.94128 2.01872 1.26350 0.81873 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 50 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 51 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 52 2.02839 0.85809 1.24486 1.85470 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 53 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 54 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 55 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 56 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 57 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 58 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 59 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 60 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 61 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 62 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 63 2.59940 3.12390 0.18854 2.92750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 64 0.20053 2.92392 2.74396 2.75406 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 65 2.73263 0.25099 2.87075 2.29993 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04257 3.87092 3.87092 1.46634 0.26236 1.09861 0.40547 66 2.55830 2.32881 2.66979 0.27987 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //