INFERNAL1/a [1.1.5 | Sep 2023] NAME HOTAIR_3 ACC RF01906 DESC HOTAIR conserved region 3 STATES 298 NODES 100 CLEN 98 W 192 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 06:35:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01906/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 2.195557 CKSUM 7048104 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 81.00 NC 68.10 EFP7GF -6.8101 0.71826 ECMLC 0.80272 -8.71746 -1.28705 1600000 467248 0.002568 ECMGC 0.41059 -18.27700 -7.94331 1600000 27843 0.014366 ECMLI 0.58105 -9.21642 0.40739 1600000 321888 0.003728 ECMGI 0.48149 -7.51411 1.14071 1600000 25813 0.015496 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 192 281 -7.053 -7.260 -0.049 -5.674 IL 1 1 2 1 4 12 48 194 283 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 12 47 194 283 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 12 47 192 281 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 4 2 3 5 3 7 43 189 278 -11.551 -1.585 -0.585 IL 5 5 3 5 3 13 49 198 288 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 11 46 191 280 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 7 5 3 8 3 7 42 188 277 -11.551 -1.585 -0.585 IL 8 8 3 8 3 13 48 197 287 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 10 45 190 279 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 10 8 3 11 3 6 41 187 275 -11.551 -1.585 -0.585 IL 11 11 3 11 3 12 47 195 285 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 10 44 188 277 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 13 11 3 14 3 6 40 185 274 -11.551 -1.585 -0.585 IL 14 14 3 14 3 11 46 194 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 9 44 187 276 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 16 14 3 17 3 5 39 184 272 -11.551 -1.585 -0.585 IL 17 17 3 17 3 11 46 193 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 9 43 186 274 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 19 17 3 20 3 5 39 183 271 -11.551 -1.585 -0.585 IL 20 20 3 20 3 10 45 192 281 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 8 42 185 273 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 22 20 3 23 3 4 38 181 270 -11.551 -1.585 -0.585 IL 23 23 3 23 3 10 44 190 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 8 41 183 272 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 25 23 3 26 3 4 37 180 268 -11.551 -1.585 -0.585 IL 26 26 3 26 3 9 43 189 278 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 7 41 182 270 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 28 26 3 29 3 3 36 179 267 -11.551 -1.585 -0.585 IL 29 29 3 29 3 9 42 188 277 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 7 40 181 269 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 31 29 3 32 3 3 35 178 265 -11.551 -1.585 -0.585 IL 32 32 3 32 3 8 42 187 275 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 6 39 179 267 -5.458 -0.067 -5.458 -0.367 -1.566 1.298 -1.225 D 34 32 3 35 3 2 35 176 264 -11.551 -1.585 -0.585 IL 35 35 3 35 3 8 41 185 274 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 36 35 3 38 3 6 38 178 266 -5.458 -0.067 -5.458 -0.923 -1.873 1.516 -1.557 D 37 35 3 38 3 2 34 175 263 -11.551 -1.585 -0.585 IL 38 38 3 38 3 7 40 184 273 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 6 38 177 264 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 40 38 3 41 3 2 33 174 261 -11.551 -1.585 -0.585 IL 41 41 3 41 3 7 39 183 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 5 37 176 263 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 43 41 3 44 3 1 32 172 260 -11.551 -1.585 -0.585 IL 44 44 3 44 3 6 39 181 270 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 5 36 174 262 -5.458 -0.067 -5.458 -0.555 -0.544 -0.988 1.090 D 46 44 3 47 3 1 32 171 258 -11.551 -1.585 -0.585 IL 47 47 3 47 3 6 38 180 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 4 35 173 260 -5.458 -0.067 -5.458 -1.288 1.340 -0.990 -0.847 D 49 47 3 50 3 1 31 170 257 -11.551 -1.585 -0.585 IL 50 50 3 50 3 6 37 179 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 51 50 3 53 3 4 34 172 259 -3.155 -0.209 -5.458 -0.553 -1.668 1.382 -1.335 D 52 50 3 53 3 0 30 169 256 -11.551 -1.585 -0.585 IL 53 53 3 53 3 4 35 172 259 -4.391 -0.071 -12.035 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 3 34 171 258 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 55 53 3 56 3 0 29 167 254 -11.551 -1.585 -0.585 IL 56 56 3 56 3 5 35 177 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 57 56 3 59 3 3 33 169 256 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 58 56 3 59 3 0 29 166 253 -11.551 -1.585 -0.585 IL 59 59 3 59 3 4 35 175 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - C - - - ML 60 59 3 62 3 3 32 168 255 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 61 59 3 62 3 0 28 165 251 -11.551 -1.585 -0.585 IL 62 62 3 62 3 4 34 174 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - C - - - ML 63 62 3 65 3 2 31 167 253 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 64 62 3 65 3 0 27 163 250 -11.551 -1.585 -0.585 IL 65 65 3 65 3 4 33 173 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 66 65 3 68 3 2 31 165 252 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 67 65 3 68 3 0 26 162 249 -11.551 -1.585 -0.585 IL 68 68 3 68 3 3 32 171 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - C - - - ML 69 68 3 71 3 2 30 164 250 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 70 68 3 71 3 0 26 161 247 -11.551 -1.585 -0.585 IL 71 71 3 71 3 3 32 170 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - C - - - ML 72 71 3 74 3 2 29 163 249 -5.458 -0.067 -5.458 -1.364 1.337 -1.549 -0.427 D 73 71 3 74 3 0 25 160 246 -11.551 -1.585 -0.585 IL 74 74 3 74 3 3 31 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - A - - - ML 75 74 3 77 3 1 28 161 248 -5.458 -0.067 -5.458 1.312 -1.386 -0.602 -1.071 D 76 74 3 77 3 0 24 158 244 -11.551 -1.585 -0.585 IL 77 77 3 77 3 2 30 167 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 28 160 246 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 79 77 3 80 3 0 23 157 243 -11.551 -1.585 -0.585 IL 80 80 3 80 3 2 29 166 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 81 80 3 83 3 1 27 159 245 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 82 80 3 83 3 0 23 156 241 -11.551 -1.585 -0.585 IL 83 83 3 83 3 2 29 165 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 84 83 3 86 3 1 26 157 243 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 85 83 3 86 3 0 22 154 240 -11.551 -1.585 -0.585 IL 86 86 3 86 3 2 28 164 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 87 86 3 89 3 1 25 156 242 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 88 86 3 89 3 0 21 153 238 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 27 162 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - A - - - ML 90 89 3 92 3 1 25 155 240 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 91 89 3 92 3 0 21 152 237 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 26 161 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - G - - - ML 93 92 3 95 3 1 24 154 239 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 94 92 3 95 3 0 20 150 235 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 25 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 23 152 237 -5.458 -0.067 -5.458 -1.424 1.389 -1.610 -0.555 D 97 95 3 98 3 0 19 149 234 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 25 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 99 98 3 101 3 1 22 151 236 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 100 98 3 101 3 0 18 148 233 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 24 157 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 102 101 3 104 3 1 21 150 234 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 103 101 3 104 3 0 18 147 231 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 23 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - U - - - ML 105 104 3 107 3 1 20 148 233 -5.458 -0.106 -4.387 -1.455 -1.164 -1.603 1.516 D 106 104 3 107 3 0 17 145 230 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 22 154 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 108 107 3 110 3 1 20 147 231 -5.421 -0.112 -4.291 -1.390 -1.110 -1.534 1.491 D 109 107 3 110 3 0 17 144 229 -12.002 -0.965 -1.036 IL 110 110 3 110 3 1 22 153 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - C - - - ML 111 110 3 113 3 1 19 146 230 -5.418 -0.069 -5.418 -1.308 1.314 -1.487 -0.408 D 112 110 3 113 3 0 15 143 227 -12.033 -0.937 -1.067 IL 113 113 3 113 3 1 21 152 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 114 113 3 116 3 1 19 144 229 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 115 113 3 116 3 0 14 141 225 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 20 150 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - c - - - ML 117 116 3 119 3 1 18 143 227 -5.458 -0.067 -5.458 -1.100 0.983 -1.272 0.192 D 118 116 3 119 3 0 13 140 224 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 20 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 120 119 3 122 3 1 17 142 226 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 121 119 3 122 3 0 13 138 222 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 19 148 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - C - - - ML 123 122 3 125 3 1 16 140 224 -5.458 -0.067 -5.458 -1.302 1.350 -1.020 -0.856 D 124 122 3 125 3 0 12 137 221 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 18 146 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - u - - - ML 126 125 3 128 3 1 16 139 223 -5.458 -0.067 -5.458 -0.521 -0.105 -0.904 0.879 D 127 125 3 128 3 0 11 136 219 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 17 145 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 129 128 3 131 3 1 15 137 221 -5.458 -0.067 -5.458 -0.256 -1.505 1.240 -1.160 D 130 128 3 131 3 0 11 134 217 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 17 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - c - - - ML 132 131 3 134 3 1 14 136 219 -5.458 -0.067 -5.458 -0.809 0.684 0.198 -0.565 D 133 131 3 134 3 0 10 133 216 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 16 142 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - c - - - ML 135 134 3 137 3 1 14 135 218 -5.458 -0.067 -5.458 0.179 0.734 -0.948 -0.544 D 136 134 3 137 3 0 9 132 214 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 15 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 13 133 216 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 139 137 3 140 3 0 9 130 213 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 15 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - G - - - ML 141 140 3 143 3 1 12 132 215 -5.458 -0.067 -5.458 -0.861 -1.839 1.496 -1.520 D 142 140 3 143 3 0 8 129 211 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 14 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 144 143 3 146 3 1 12 131 213 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 145 143 3 146 3 0 7 127 210 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 13 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 147 146 3 149 3 1 11 129 212 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 148 146 3 149 3 0 7 126 208 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 12 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - C - - - ML 150 149 3 152 3 1 10 128 210 -5.458 -0.067 -5.458 -0.709 1.134 -1.210 -0.394 D 151 149 3 152 3 0 6 125 207 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 12 134 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - G - - - ML 153 152 3 155 3 1 9 127 209 -5.458 -0.067 -5.458 -0.847 -1.154 1.094 -0.216 D 154 152 3 155 3 0 6 124 206 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 11 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - U - - - ML 156 155 3 158 3 1 9 125 207 -4.182 -0.178 -4.030 -0.992 0.041 -1.155 1.014 D 157 155 3 158 3 0 5 123 205 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 9 125 207 -3.072 -0.184 -10.716 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - G - - - ML 159 158 3 161 3 1 8 124 206 -5.401 -0.070 -5.401 -0.224 -1.418 1.198 -1.073 D 160 158 3 161 3 0 4 122 203 -12.196 -0.802 -1.230 IL 161 161 3 161 3 1 10 131 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - G - - - ML 162 161 3 164 3 1 8 123 205 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 163 161 3 164 3 0 3 119 201 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 9 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - C - - - ML 165 164 3 167 3 1 7 121 203 -5.458 -0.067 -5.458 -1.434 1.397 -1.621 -0.577 D 166 164 3 167 3 0 3 118 199 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 9 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - c - - - ML 168 167 3 170 3 1 6 120 201 -5.458 -0.067 -5.458 -0.073 0.434 -0.278 -0.195 D 169 167 3 170 3 0 2 117 198 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 8 127 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - G - - - ML 171 170 3 173 3 1 6 119 200 -5.458 -0.067 -5.458 -0.610 -0.693 1.111 -0.821 D 172 170 3 173 3 0 1 115 196 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 7 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - U - - - ML 174 173 3 176 3 1 5 117 198 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 175 173 3 176 3 0 1 114 195 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 7 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - G - - - ML 177 176 3 179 3 1 5 116 197 -5.458 -0.067 -5.458 -0.390 -1.578 1.309 -1.238 D 178 176 3 179 3 0 0 112 193 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 6 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - G - - - ML 180 179 3 182 3 1 4 114 195 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 181 179 3 182 3 0 0 111 191 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 6 121 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - C - - - ML 183 182 3 185 3 1 4 113 193 -5.458 -0.067 -5.458 -1.364 1.337 -1.549 -0.427 D 184 182 3 185 3 0 0 110 190 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 5 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - A - - - ML 186 185 3 188 3 1 3 111 192 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 187 185 3 188 3 0 0 108 188 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 5 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - U - - - ML 189 188 3 191 3 1 3 110 190 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 190 188 3 191 3 0 0 107 186 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 4 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - U - - - ML 192 191 3 194 3 1 3 109 189 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 193 191 3 194 3 0 0 105 185 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 4 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 67 - U - - - ML 195 194 3 197 3 1 2 107 187 -5.458 -0.067 -5.458 -1.053 -0.960 -0.807 1.282 D 196 194 3 197 3 0 0 104 183 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 3 114 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - C - - - ML 198 197 3 200 3 1 2 106 185 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 199 197 3 200 3 0 0 102 181 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - U - - - ML 201 200 3 203 3 1 2 104 184 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 202 200 3 203 3 0 0 101 180 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - G - - - ML 204 203 3 206 3 1 1 103 182 -5.458 -0.067 -5.458 -0.482 -0.994 1.168 -0.905 D 205 203 3 206 3 0 0 99 178 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 2 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - G - - - ML 207 206 3 209 3 1 1 101 180 -5.458 -0.067 -5.458 -0.671 -1.117 1.277 -1.037 D 208 206 3 209 3 0 0 98 176 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - U - - - ML 210 209 3 212 3 1 1 100 179 -5.458 -0.067 -5.458 -0.618 -0.825 -0.686 1.113 D 211 209 3 212 3 0 0 96 175 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - C - - - ML 213 212 3 215 3 1 1 98 177 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 214 212 3 215 3 0 0 95 173 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 2 105 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 74 - U - - - ML 216 215 3 218 3 1 1 97 175 -5.458 -0.108 -4.335 -1.455 -1.164 -1.603 1.516 D 217 215 3 218 3 0 0 94 172 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 75 - U - - - ML 219 218 3 221 3 1 1 95 173 -5.419 -0.069 -5.419 -1.113 -0.554 -1.270 1.288 D 220 218 3 221 3 0 0 93 170 -12.029 -0.940 -1.063 IL 221 221 3 221 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 76 - G - - - ML 222 221 3 224 3 1 1 94 172 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 223 221 3 224 3 0 0 90 168 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 77 - U - - - ML 225 224 3 227 3 1 1 92 170 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 226 224 3 227 3 0 0 89 166 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 78 - A - - - ML 228 227 3 230 3 1 1 91 168 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 229 227 3 230 3 0 0 87 164 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 79 - A - - - ML 231 230 3 233 3 1 1 89 166 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 232 230 3 233 3 0 0 86 162 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 80 - A - - - ML 234 233 3 236 3 1 1 88 164 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 235 233 3 236 3 0 0 84 160 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 81 - C - - - ML 237 236 3 239 3 1 1 86 163 -5.458 -0.067 -5.458 -1.381 1.352 -1.566 -0.463 D 238 236 3 239 3 0 0 82 158 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 82 - A - - - ML 240 239 3 242 3 1 1 84 161 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 241 239 3 242 3 0 0 81 157 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 83 - C - - - ML 243 242 3 245 3 1 1 83 159 -5.458 -0.067 -5.458 -1.282 1.253 -1.463 -0.246 D 244 242 3 245 3 0 0 79 155 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 84 - u - - - ML 246 245 3 248 3 1 1 81 157 -5.458 -0.067 -5.458 -0.287 0.123 -0.790 0.597 D 247 245 3 248 3 0 0 77 153 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 1 89 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 85 - G - - - ML 249 248 3 251 3 1 1 80 155 -5.458 -0.067 -5.458 -0.625 -1.708 1.412 -1.378 D 250 248 3 251 3 0 0 76 151 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 87 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 86 - G - - - ML 252 251 3 254 3 1 1 78 153 -5.458 -0.067 -5.458 -0.584 -1.686 1.396 -1.353 D 253 251 3 254 3 0 0 74 149 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 87 - a - - - ML 255 254 3 257 3 1 1 76 151 -5.458 -0.067 -5.458 0.774 -0.773 -0.465 -0.028 D 256 254 3 257 3 0 0 72 146 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 84 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 88 - C - - - ML 258 257 3 260 3 1 1 74 149 -5.458 -0.067 -5.458 -1.063 1.152 -0.907 -0.385 D 259 257 3 260 3 0 0 70 144 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 89 - U - - - ML 261 260 3 263 3 1 1 73 147 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 262 260 3 263 3 0 0 69 142 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 90 - c - - - ML 264 263 3 266 3 1 1 71 145 -5.458 -0.067 -5.458 -0.818 0.832 -0.641 0.016 D 265 263 3 266 3 0 0 67 140 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 91 - U - - - ML 267 266 3 269 3 1 1 69 142 -5.458 -0.067 -5.458 -1.028 -0.947 -0.756 1.262 D 268 266 3 269 3 0 0 65 138 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 92 - u - - - ML 270 269 3 272 3 1 1 67 140 -5.458 -0.067 -5.458 -0.250 -0.734 -0.503 0.889 D 271 269 3 272 3 0 0 63 135 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 93 - U - - - ML 273 272 3 275 3 1 1 65 138 -5.458 -0.067 -5.458 -0.687 -0.550 -1.058 1.148 D 274 272 3 275 3 0 0 61 133 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 94 - G - - - ML 276 275 3 278 3 1 1 63 135 -5.458 -0.067 -5.458 -0.942 -1.322 1.255 -0.528 D 277 275 3 278 3 0 0 58 130 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 95 - G - - - ML 279 278 3 281 3 1 1 61 133 -5.458 -0.067 -5.458 -0.558 -1.152 1.096 -0.449 D 280 278 3 281 3 0 0 56 127 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 96 - G - - - ML 282 281 3 284 3 1 1 59 130 -5.458 -0.067 -5.458 -0.942 -1.322 1.255 -0.528 D 283 281 3 284 3 0 0 53 123 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 97 - g - - - ML 285 284 3 287 3 1 1 56 127 -5.458 -0.067 -5.458 -0.053 -0.935 0.760 -0.286 D 286 284 3 287 3 0 0 50 120 -11.551 -1.585 -0.585 IL 287 287 3 287 3 1 1 66 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 96 ] 98 - c - - - ML 288 287 3 290 3 1 1 53 123 -5.458 -0.121 -4.114 -1.067 0.912 -1.237 0.284 D 289 287 3 290 3 0 0 45 114 -11.551 -1.585 -0.585 IL 290 290 3 290 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 97 ] 99 - c - - - ML 291 290 3 293 3 1 1 49 118 -5.407 -0.070 -5.407 -0.559 0.785 -0.954 0.114 D 292 290 3 293 3 0 0 30 100 -12.148 -2.182 -0.359 IL 293 293 3 293 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 98 ] 100 - U - - - ML 294 293 3 296 2 1 1 1 1 * 0.000 -1.364 -1.089 -1.506 1.480 D 295 293 3 296 2 0 0 0 0 * 0.000 IL 296 296 3 296 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 99 ] - - - - - - E 297 296 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HOTAIR_3 ACC RF01906 DESC HOTAIR conserved region 3 LENG 98 MAXL 192 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Tue Jul 9 06:35:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01906/CM NSEQ 17 EFFN 2.195557 CKSUM 7048104 STATS LOCAL MSV -8.7135 0.71826 STATS LOCAL VITERBI -10.0582 0.71826 STATS LOCAL FORWARD -3.3914 0.71826 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51214 1.43858 1.38326 1.23258 1.38629 1.38629 1.38629 1.38629 0.02809 4.88879 3.90362 0.39730 1.11515 0.00000 * 1 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 2 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 3 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 4 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 5 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 6 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 7 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 8 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 9 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 10 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 11 1.64079 2.47168 0.48652 2.23522 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 12 2.02606 2.68458 0.33553 2.46585 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 13 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 14 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 15 1.77095 1.76350 2.07114 0.63047 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 16 2.27922 0.45762 2.07248 1.97348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 17 1.76934 2.54263 0.42807 2.31135 - G - - : 1.38629 1.38629 1.38629 1.38629 0.14509 2.18654 3.78318 0.04883 3.04367 1.09861 0.40547 18 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 19 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 20 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 21 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 22 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 23 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 24 2.33205 0.45956 2.46011 1.68246 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 25 0.47709 2.34691 1.80356 2.12831 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 26 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 27 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 28 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 29 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 30 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 31 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 32 2.37300 0.42343 2.50259 1.77118 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 33 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 34 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 35 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07316 3.78318 3.04077 1.46634 0.26236 1.09861 0.40547 36 2.34991 2.15574 2.44960 0.35314 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07732 3.75781 2.97461 1.46634 0.26236 0.66882 0.71808 37 2.29286 0.47565 2.41711 1.66938 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04789 3.75577 3.75577 1.46634 0.26236 0.64913 0.73919 38 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 39 2.14871 0.70464 2.26770 1.25341 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 40 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 41 2.28911 0.45064 2.09309 1.97966 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 42 1.74759 1.45925 2.01276 0.77702 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 43 1.56342 2.42931 0.52663 2.19023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 44 1.94727 0.91226 1.24920 1.77794 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 45 1.26239 0.87721 2.04337 1.76324 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 46 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 47 1.98317 2.66084 0.34912 2.43991 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 48 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 49 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 50 1.87773 0.60010 2.22521 1.65936 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 51 1.97347 2.18649 0.62828 1.53616 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 52 2.07382 1.35811 2.18685 0.68344 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12363 2.89899 2.79332 0.12667 2.12884 1.09861 0.40547 53 1.54148 2.36913 0.55592 2.13008 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04848 3.74395 3.74395 1.46634 0.26236 0.55576 0.85247 54 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 55 2.38000 0.41767 2.50980 1.78625 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 56 1.43685 1.08557 1.57915 1.52113 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 57 1.80926 1.86632 0.61614 1.95539 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 58 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 59 1.65656 2.48036 0.47883 2.24448 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 60 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 61 2.33205 0.45956 2.46011 1.68246 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 62 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 63 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 64 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 65 2.11616 2.05143 1.94589 0.49742 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 66 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 67 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 68 1.72007 2.07518 0.57637 2.01381 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 69 1.85118 2.16031 0.50119 2.10497 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 70 1.81476 1.95807 1.86180 0.61508 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 71 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 72 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07506 3.78318 3.00454 1.46634 0.26236 1.09861 0.40547 73 2.15754 1.77041 2.26638 0.49357 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04788 3.75600 3.75600 1.46634 0.26236 0.65132 0.73681 74 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 75 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 76 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 77 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 78 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 79 2.34345 0.44906 2.47198 1.70727 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 80 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 81 2.27501 0.51802 2.40043 1.55673 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 82 1.58499 1.30072 1.93396 0.97249 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 83 1.81968 2.57046 0.40762 2.34146 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 84 1.79129 2.55477 0.41899 2.32446 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 85 0.85007 1.92188 1.70843 1.40596 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 86 2.12325 0.58775 2.01517 1.65295 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 87 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 88 1.95315 0.80941 1.83052 1.37546 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 89 2.09851 2.04300 1.91004 0.51141 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 90 1.55925 1.89534 1.73491 0.76998 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 91 1.86243 1.76752 2.11936 0.59088 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 92 2.03937 2.30237 0.51660 1.75259 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 93 1.77295 2.18461 0.62631 1.69779 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 94 2.03937 2.30237 0.51660 1.75259 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 95 1.42301 2.03436 0.85981 1.58472 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 96 2.12611 0.75439 2.24395 1.18953 - c - - : 1.38629 1.38629 1.38629 1.38629 0.08391 3.78318 2.85188 1.46634 0.26236 1.09861 0.40547 97 1.77410 0.84205 2.04770 1.30747 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04830 3.74757 3.74757 1.46634 0.26236 1.51244 0.24894 98 2.33200 2.14079 2.43046 0.36048 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //