INFERNAL1/a [1.1.4 | Dec 2020] NAME HOTAIR_3 ACC RF01906 DESC HOTAIR conserved region 3 STATES 298 NODES 100 CLEN 98 W 192 ALPH RNA RF no CONS yes MAP yes DATE Sat Apr 5 14:18:46 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 2.195557 CKSUM 7048104 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 81.00 NC 68.00 EFP7GF -6.8081 0.71828 ECMLC 0.80424 -8.69380 -1.28516 1600000 464340 0.002584 ECMGC 0.40574 -18.41342 -7.95746 1600000 27830 0.014373 ECMLI 0.58055 -9.22651 0.41078 1600000 322873 0.003717 ECMGI 0.48610 -7.40761 1.16468 1600000 25809 0.015498 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 192 281 -7.053 -7.260 -0.049 -5.674 IL 1 1 2 1 4 12 48 194 283 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 12 47 194 283 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 12 47 192 281 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 4 2 3 5 3 7 43 189 278 -11.551 -1.585 -0.585 IL 5 5 3 5 3 13 49 198 288 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 11 46 191 280 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 7 5 3 8 3 7 42 188 277 -11.551 -1.585 -0.585 IL 8 8 3 8 3 13 48 197 287 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 11 45 190 279 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 10 8 3 11 3 6 41 187 275 -11.551 -1.585 -0.585 IL 11 11 3 11 3 12 47 195 285 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 10 44 188 277 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 13 11 3 14 3 6 40 185 274 -11.551 -1.585 -0.585 IL 14 14 3 14 3 11 46 194 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 9 44 187 276 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 16 14 3 17 3 5 39 184 272 -11.551 -1.585 -0.585 IL 17 17 3 17 3 11 46 193 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 9 43 186 274 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 19 17 3 20 3 5 39 183 271 -11.551 -1.585 -0.585 IL 20 20 3 20 3 10 45 192 281 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 8 42 185 273 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 22 20 3 23 3 4 38 181 270 -11.551 -1.585 -0.585 IL 23 23 3 23 3 10 44 190 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 8 41 183 272 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 25 23 3 26 3 4 37 180 268 -11.551 -1.585 -0.585 IL 26 26 3 26 3 9 43 189 278 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 7 41 182 270 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 28 26 3 29 3 3 36 179 267 -11.551 -1.585 -0.585 IL 29 29 3 29 3 9 42 188 277 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 7 40 181 269 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 31 29 3 32 3 3 35 178 265 -11.551 -1.585 -0.585 IL 32 32 3 32 3 8 42 187 275 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 6 39 179 267 -5.458 -0.067 -5.458 -0.377 -1.571 1.303 -1.230 D 34 32 3 35 3 2 35 176 264 -11.551 -1.585 -0.585 IL 35 35 3 35 3 8 41 185 274 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 36 35 3 38 3 6 38 178 266 -5.458 -0.067 -5.458 -0.910 -1.866 1.512 -1.550 D 37 35 3 38 3 2 34 175 263 -11.551 -1.585 -0.585 IL 38 38 3 38 3 7 40 184 273 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 6 38 177 264 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 40 38 3 41 3 2 33 174 261 -11.551 -1.585 -0.585 IL 41 41 3 41 3 7 39 183 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 5 37 176 263 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 43 41 3 44 3 1 32 172 260 -11.551 -1.585 -0.585 IL 44 44 3 44 3 6 39 181 270 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 5 36 174 262 -5.458 -0.067 -5.458 -0.541 -0.547 -0.982 1.085 D 46 44 3 47 3 1 32 171 258 -11.551 -1.585 -0.585 IL 47 47 3 47 3 6 38 180 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 4 35 173 260 -5.458 -0.067 -5.458 -1.293 1.343 -0.999 -0.850 D 49 47 3 50 3 1 31 170 257 -11.551 -1.585 -0.585 IL 50 50 3 50 3 6 37 179 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 51 50 3 53 3 4 34 172 259 -3.122 -0.214 -5.458 -0.544 -1.663 1.379 -1.329 D 52 50 3 53 3 0 30 169 256 -11.551 -1.585 -0.585 IL 53 53 3 53 3 5 35 172 259 -4.430 -0.069 -12.074 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 3 34 171 258 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 55 53 3 56 3 0 29 167 254 -11.551 -1.585 -0.585 IL 56 56 3 56 3 5 35 177 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 57 56 3 59 3 3 33 169 256 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 58 56 3 59 3 0 29 166 253 -11.551 -1.585 -0.585 IL 59 59 3 59 3 4 35 175 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - C - - - ML 60 59 3 62 3 3 32 168 255 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 61 59 3 62 3 0 28 165 251 -11.551 -1.585 -0.585 IL 62 62 3 62 3 4 34 174 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - C - - - ML 63 62 3 65 3 2 31 167 253 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 64 62 3 65 3 0 27 163 250 -11.551 -1.585 -0.585 IL 65 65 3 65 3 4 33 173 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 66 65 3 68 3 2 31 165 252 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 67 65 3 68 3 0 26 162 249 -11.551 -1.585 -0.585 IL 68 68 3 68 3 3 32 171 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - C - - - ML 69 68 3 71 3 2 30 164 250 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 70 68 3 71 3 0 26 161 247 -11.551 -1.585 -0.585 IL 71 71 3 71 3 3 32 170 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - C - - - ML 72 71 3 74 3 2 29 163 249 -5.458 -0.067 -5.458 -1.358 1.331 -1.542 -0.413 D 73 71 3 74 3 0 25 160 246 -11.551 -1.585 -0.585 IL 74 74 3 74 3 3 31 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - A - - - ML 75 74 3 77 3 1 28 161 248 -5.458 -0.067 -5.458 1.302 -1.376 -0.580 -1.059 D 76 74 3 77 3 0 24 158 244 -11.551 -1.585 -0.585 IL 77 77 3 77 3 2 30 167 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 28 160 246 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 79 77 3 80 3 0 23 157 243 -11.551 -1.585 -0.585 IL 80 80 3 80 3 2 29 166 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 81 80 3 83 3 1 27 159 245 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 82 80 3 83 3 0 23 156 241 -11.551 -1.585 -0.585 IL 83 83 3 83 3 2 29 165 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 84 83 3 86 3 1 26 157 243 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 85 83 3 86 3 0 22 154 240 -11.551 -1.585 -0.585 IL 86 86 3 86 3 2 28 164 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 87 86 3 89 3 1 25 156 242 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 88 86 3 89 3 0 21 153 238 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 27 162 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - A - - - ML 90 89 3 92 3 1 25 155 240 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 91 89 3 92 3 0 21 152 237 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 26 161 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - G - - - ML 93 92 3 95 3 1 24 154 239 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 94 92 3 95 3 0 20 150 235 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 25 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 23 152 237 -5.458 -0.067 -5.458 -1.418 1.385 -1.605 -0.544 D 97 95 3 98 3 0 19 149 234 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 25 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 99 98 3 101 3 1 22 151 236 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 100 98 3 101 3 0 18 148 233 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 24 157 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 102 101 3 104 3 1 21 150 234 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 103 101 3 104 3 0 18 147 231 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 23 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - U - - - ML 105 104 3 107 3 1 20 148 233 -5.458 -0.105 -4.400 -1.455 -1.164 -1.603 1.516 D 106 104 3 107 3 0 17 145 230 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 22 154 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 108 107 3 110 3 1 20 147 231 -5.422 -0.111 -4.305 -1.391 -1.111 -1.535 1.491 D 109 107 3 110 3 0 17 144 229 -11.996 -0.971 -1.030 IL 110 110 3 110 3 1 22 153 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - C - - - ML 111 110 3 113 3 1 19 146 230 -5.419 -0.069 -5.419 -1.306 1.311 -1.485 -0.402 D 112 110 3 113 3 0 15 143 227 -12.026 -0.943 -1.060 IL 113 113 3 113 3 1 21 152 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 114 113 3 116 3 1 19 144 229 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 115 113 3 116 3 0 14 141 225 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 20 150 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - c - - - ML 117 116 3 119 3 1 18 143 227 -5.458 -0.067 -5.458 -1.099 0.981 -1.271 0.194 D 118 116 3 119 3 0 13 140 224 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 20 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 120 119 3 122 3 1 17 142 226 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 121 119 3 122 3 0 13 138 222 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 19 148 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - C - - - ML 123 122 3 125 3 1 16 140 224 -5.458 -0.067 -5.458 -1.307 1.353 -1.029 -0.859 D 124 122 3 125 3 0 12 137 221 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 18 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - u - - - ML 126 125 3 128 3 1 16 139 223 -5.458 -0.067 -5.458 -0.525 -0.093 -0.905 0.875 D 127 125 3 128 3 0 11 136 219 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 17 145 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 129 128 3 131 3 1 15 137 221 -5.458 -0.067 -5.458 -0.234 -1.493 1.228 -1.147 D 130 128 3 131 3 0 11 134 217 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 17 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - c - - - ML 132 131 3 134 3 1 14 136 219 -5.458 -0.067 -5.458 -0.807 0.673 0.211 -0.564 D 133 131 3 134 3 0 10 133 216 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 16 142 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - c - - - ML 135 134 3 137 3 1 14 135 218 -5.458 -0.067 -5.458 0.190 0.725 -0.944 -0.542 D 136 134 3 137 3 0 9 132 214 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 15 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 13 133 216 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 139 137 3 140 3 0 9 130 213 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 15 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - G - - - ML 141 140 3 143 3 1 12 132 215 -5.458 -0.067 -5.458 -0.868 -1.843 1.499 -1.524 D 142 140 3 143 3 0 8 129 211 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 14 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 144 143 3 146 3 1 12 131 213 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 145 143 3 146 3 0 7 127 210 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 13 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - A - - - ML 147 146 3 149 3 1 11 129 212 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 148 146 3 149 3 0 7 126 208 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 12 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - C - - - ML 150 149 3 152 3 1 10 128 210 -5.458 -0.067 -5.458 -0.701 1.133 -1.208 -0.397 D 151 149 3 152 3 0 6 125 207 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 12 134 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - G - - - ML 153 152 3 155 3 1 9 127 209 -5.458 -0.067 -5.458 -0.846 -1.153 1.092 -0.214 D 154 152 3 155 3 0 6 124 206 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 11 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - U - - - ML 156 155 3 158 3 1 9 125 207 -4.141 -0.183 -3.995 -0.990 0.054 -1.153 1.006 D 157 155 3 158 3 0 5 123 205 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 9 125 207 -3.132 -0.176 -10.775 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - G - - - ML 159 158 3 161 3 1 8 124 206 -5.399 -0.070 -5.399 -0.224 -1.415 1.197 -1.070 D 160 158 3 161 3 0 4 122 203 -12.216 -0.787 -1.250 IL 161 161 3 161 3 1 10 131 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - G - - - ML 162 161 3 164 3 1 8 123 205 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 163 161 3 164 3 0 3 119 201 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 9 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - C - - - ML 165 164 3 167 3 1 7 121 203 -5.458 -0.067 -5.458 -1.436 1.399 -1.623 -0.582 D 166 164 3 167 3 0 3 118 199 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 9 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - c - - - ML 168 167 3 170 3 1 6 120 201 -5.458 -0.067 -5.458 -0.059 0.427 -0.282 -0.196 D 169 167 3 170 3 0 2 117 198 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 8 127 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - G - - - ML 171 170 3 173 3 1 6 119 200 -5.458 -0.067 -5.458 -0.616 -0.703 1.118 -0.828 D 172 170 3 173 3 0 1 115 196 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 7 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - U - - - ML 174 173 3 176 3 1 5 117 198 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 175 173 3 176 3 0 1 114 195 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 7 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - G - - - ML 177 176 3 179 3 1 5 116 197 -5.458 -0.067 -5.458 -0.399 -1.584 1.314 -1.244 D 178 176 3 179 3 0 0 112 193 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 6 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - G - - - ML 180 179 3 182 3 1 4 114 195 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 181 179 3 182 3 0 0 111 191 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 6 121 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - C - - - ML 183 182 3 185 3 1 4 113 193 -5.458 -0.067 -5.458 -1.358 1.331 -1.542 -0.413 D 184 182 3 185 3 0 0 110 190 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 5 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - A - - - ML 186 185 3 188 3 1 3 111 192 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 187 185 3 188 3 0 0 108 188 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 5 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - U - - - ML 189 188 3 191 3 1 3 110 190 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 190 188 3 191 3 0 0 107 186 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 4 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - U - - - ML 192 191 3 194 3 1 3 109 189 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 193 191 3 194 3 0 0 105 185 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 4 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 67 - U - - - ML 195 194 3 197 3 1 2 107 187 -5.458 -0.067 -5.458 -1.057 -0.962 -0.815 1.285 D 196 194 3 197 3 0 0 104 183 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 3 114 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - C - - - ML 198 197 3 200 3 1 2 106 185 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 199 197 3 200 3 0 0 102 181 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - U - - - ML 201 200 3 203 3 1 2 104 184 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 202 200 3 203 3 0 0 101 180 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - G - - - ML 204 203 3 206 3 1 1 103 182 -5.458 -0.067 -5.458 -0.484 -0.977 1.164 -0.898 D 205 203 3 206 3 0 0 99 178 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 2 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - G - - - ML 207 206 3 209 3 1 1 101 180 -5.458 -0.067 -5.458 -0.659 -1.119 1.274 -1.033 D 208 206 3 209 3 0 0 98 176 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - U - - - ML 210 209 3 212 3 1 1 100 179 -5.458 -0.067 -5.458 -0.625 -0.828 -0.694 1.118 D 211 209 3 212 3 0 0 96 175 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - C - - - ML 213 212 3 215 3 1 1 98 177 -5.458 -0.067 -5.458 -1.683 1.559 -1.865 -1.099 D 214 212 3 215 3 0 0 95 173 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 2 105 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 74 - U - - - ML 216 215 3 218 3 1 1 97 175 -5.458 -0.110 -4.307 -1.455 -1.164 -1.603 1.516 D 217 215 3 218 3 0 0 94 172 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 75 - U - - - ML 219 218 3 221 3 1 1 95 173 -5.417 -0.069 -5.417 -1.112 -0.557 -1.269 1.289 D 220 218 3 221 3 0 0 93 170 -12.043 -0.927 -1.078 IL 221 221 3 221 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 76 - G - - - ML 222 221 3 224 3 1 1 94 172 -5.458 -0.067 -5.458 -1.551 -2.226 1.671 -1.939 D 223 221 3 224 3 0 0 90 168 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 77 - U - - - ML 225 224 3 227 3 1 1 92 170 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 226 224 3 227 3 0 0 89 166 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 78 - A - - - ML 228 227 3 230 3 1 1 91 168 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 229 227 3 230 3 0 0 87 164 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 79 - A - - - ML 231 230 3 233 3 1 1 89 166 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 232 230 3 233 3 0 0 86 162 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 80 - A - - - ML 234 233 3 236 3 1 1 88 164 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 235 233 3 236 3 0 0 84 160 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 81 - C - - - ML 237 236 3 239 3 1 1 86 163 -5.458 -0.067 -5.458 -1.384 1.355 -1.569 -0.469 D 238 236 3 239 3 0 0 82 158 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 82 - A - - - ML 240 239 3 242 3 1 1 84 161 -5.458 -0.067 -5.458 1.632 -1.913 -1.651 -1.659 D 241 239 3 242 3 0 0 81 157 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 83 - C - - - ML 243 242 3 245 3 1 1 83 159 -5.458 -0.067 -5.458 -1.286 1.257 -1.467 -0.254 D 244 242 3 245 3 0 0 79 155 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 84 - u - - - ML 246 245 3 248 3 1 1 81 157 -5.458 -0.067 -5.458 -0.293 0.114 -0.792 0.608 D 247 245 3 248 3 0 0 77 153 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 1 89 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 85 - G - - - ML 249 248 3 251 3 1 1 80 155 -5.458 -0.067 -5.458 -0.633 -1.713 1.415 -1.383 D 250 248 3 251 3 0 0 76 151 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 87 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 86 - G - - - ML 252 251 3 254 3 1 1 78 153 -5.458 -0.067 -5.458 -0.581 -1.684 1.394 -1.351 D 253 251 3 254 3 0 0 74 149 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 87 - a - - - ML 255 254 3 257 3 1 1 76 151 -5.458 -0.067 -5.458 0.781 -0.775 -0.470 -0.035 D 256 254 3 257 3 0 0 72 146 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 84 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 88 - C - - - ML 258 257 3 260 3 1 1 74 149 -5.458 -0.067 -5.458 -1.060 1.147 -0.910 -0.372 D 259 257 3 260 3 0 0 70 144 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 89 - U - - - ML 261 260 3 263 3 1 1 73 147 -5.458 -0.067 -5.458 -1.455 -1.164 -1.603 1.516 D 262 260 3 263 3 0 0 69 142 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 90 - c - - - ML 264 263 3 266 3 1 1 71 145 -5.458 -0.067 -5.458 -0.813 0.829 -0.626 0.009 D 265 263 3 266 3 0 0 67 140 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 91 - U - - - ML 267 266 3 269 3 1 1 69 142 -5.458 -0.067 -5.458 -1.023 -0.945 -0.746 1.258 D 268 266 3 269 3 0 0 65 138 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 92 - u - - - ML 270 269 3 272 3 1 1 67 140 -5.458 -0.067 -5.458 -0.232 -0.731 -0.493 0.876 D 271 269 3 272 3 0 0 63 135 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 93 - U - - - ML 273 272 3 275 3 1 1 65 138 -5.458 -0.067 -5.458 -0.691 -0.543 -1.058 1.146 D 274 272 3 275 3 0 0 61 133 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 94 - G - - - ML 276 275 3 278 3 1 1 63 135 -5.458 -0.067 -5.458 -0.946 -1.328 1.260 -0.539 D 277 275 3 278 3 0 0 58 130 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 95 - G - - - ML 279 278 3 281 3 1 1 61 133 -5.458 -0.067 -5.458 -0.555 -1.155 1.099 -0.457 D 280 278 3 281 3 0 0 56 127 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 96 - G - - - ML 282 281 3 284 3 1 1 59 130 -5.458 -0.067 -5.458 -0.946 -1.328 1.260 -0.539 D 283 281 3 284 3 0 0 53 123 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 97 - g - - - ML 285 284 3 287 3 1 1 56 127 -5.458 -0.067 -5.458 -0.041 -0.933 0.754 -0.289 D 286 284 3 287 3 0 0 50 120 -11.551 -1.585 -0.585 IL 287 287 3 287 3 1 1 66 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 96 ] 98 - c - - - ML 288 287 3 290 3 1 1 53 123 -5.458 -0.120 -4.129 -1.069 0.916 -1.239 0.279 D 289 287 3 290 3 0 0 45 114 -11.551 -1.585 -0.585 IL 290 290 3 290 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 97 ] 99 - c - - - ML 291 290 3 293 3 1 1 49 118 -5.407 -0.070 -5.407 -0.542 0.771 -0.944 0.121 D 292 290 3 293 3 0 0 30 100 -12.140 -2.174 -0.362 IL 293 293 3 293 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 98 ] 100 - U - - - ML 294 293 3 296 2 1 1 1 1 * 0.000 -1.366 -1.090 -1.508 1.481 D 295 293 3 296 2 0 0 0 0 * 0.000 IL 296 296 3 296 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 99 ] - - - - - - E 297 296 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME HOTAIR_3 ACC RF01906 DESC HOTAIR conserved region 3 LENG 98 MAXL 192 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sat Apr 5 14:18:46 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 17 EFFN 2.195557 STATS LOCAL MSV -8.7662 0.71828 STATS LOCAL VITERBI -10.0577 0.71828 STATS LOCAL FORWARD -3.3900 0.71828 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51164 1.43907 1.38309 1.23271 1.38629 1.38629 1.38629 1.38629 0.02809 4.88879 3.90362 0.39730 1.11515 0.00000 * 1 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 2 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 3 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 4 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 5 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 6 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 7 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 8 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 9 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 10 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 11 1.64748 2.47536 0.48324 2.23914 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 12 2.01708 2.67961 0.33832 2.46042 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 13 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 14 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 15 1.76136 1.76542 2.06678 0.63397 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 16 2.28233 0.45540 2.07897 1.97542 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 17 1.76324 2.53926 0.43063 2.30771 - G - - : 1.38629 1.38629 1.38629 1.38629 0.14806 2.16393 3.78318 0.04752 3.07021 1.09861 0.40547 18 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 19 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 20 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 21 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 22 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 23 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 24 2.32736 0.46398 2.45522 1.67222 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 25 0.48384 2.33991 1.78811 2.12047 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 26 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 27 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 28 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 29 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 30 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 31 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 32 2.36934 0.42649 2.49882 1.76330 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 33 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 34 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 35 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07271 3.78318 3.04955 1.46634 0.26236 1.09861 0.40547 36 2.35066 2.15636 2.45040 0.35284 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07678 3.75824 2.98415 1.46634 0.26236 0.67311 0.71359 37 2.29142 0.47742 2.41566 1.66500 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04787 3.75623 3.75623 1.46634 0.26236 0.65349 0.73444 38 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 39 2.14801 0.70606 2.26697 1.25151 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 40 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 41 2.29216 0.44851 2.09946 1.98157 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 42 1.75050 1.45067 2.01346 0.78007 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 43 1.54824 2.42105 0.53498 2.18151 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 44 1.94542 0.91950 1.24038 1.77739 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 45 1.25462 0.88397 2.04067 1.76179 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 46 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 47 1.98795 2.66348 0.34757 2.44280 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 48 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 49 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 50 1.87250 0.60121 2.22338 1.66141 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 51 1.97294 2.18554 0.62936 1.53432 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 52 2.07238 1.34874 2.18542 0.68892 - U - - : 1.38629 1.38629 1.38629 1.38629 0.12714 2.87021 2.76931 0.12123 2.17003 1.09861 0.40547 53 1.54153 2.36728 0.55658 2.12826 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04855 3.74240 3.74240 1.46634 0.26236 0.54559 0.86631 54 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 55 2.38170 0.41629 2.51155 1.78990 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 56 1.42705 1.09003 1.58208 1.52221 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 57 1.81330 1.87344 0.61167 1.96010 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 58 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 59 1.66315 2.48399 0.47566 2.24836 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 60 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 61 2.32736 0.46398 2.45522 1.67222 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 62 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 63 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 64 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 65 2.11895 2.05276 1.95151 0.49528 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 66 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 67 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 68 1.72175 2.06321 0.57977 2.00863 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 69 1.84287 2.16212 0.50348 2.10262 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 70 1.81975 1.95993 1.86731 0.61152 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 71 2.55301 0.30538 2.67911 2.14824 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 72 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07608 3.78318 2.98563 1.46634 0.26236 1.09861 0.40547 73 2.15741 1.77264 2.26610 0.49302 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75503 3.75503 1.46634 0.26236 0.64231 0.74671 74 2.46104 2.92911 0.22815 2.73023 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 75 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 76 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 77 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 78 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 79 2.34543 0.44728 2.47404 1.71156 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 80 0.25509 2.71254 2.53042 2.53631 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 81 2.27744 0.51530 2.40298 1.56216 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 82 1.58948 1.30717 1.93560 0.96483 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 83 1.82533 2.57358 0.40540 2.34485 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 84 1.78886 2.55342 0.41998 2.32301 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 85 0.84524 1.92379 1.71174 1.41083 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 86 2.12098 0.59091 2.01712 1.64389 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 87 2.39498 2.19329 2.49758 0.33548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 88 1.94992 0.81141 1.82051 1.38016 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 89 2.09519 2.04142 1.90325 0.51412 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 90 1.54681 1.89275 1.72779 0.77927 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 91 1.86492 1.76240 2.11957 0.59172 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 92 2.04174 2.30646 0.51327 1.75998 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 93 1.77092 2.18656 0.62471 1.70315 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 94 2.04174 2.30646 0.51327 1.75998 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 95 1.41490 2.03322 0.86384 1.58671 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04657 3.78318 3.78318 1.46634 0.26236 1.09861 0.40547 96 2.12727 0.75161 2.24517 1.19295 - c - - : 1.38629 1.38629 1.38629 1.38629 0.08327 3.78318 2.86205 1.46634 0.26236 1.09861 0.40547 97 1.76203 0.85203 2.04067 1.30263 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04827 3.74817 3.74817 1.46634 0.26236 1.50677 0.25055 98 2.33306 2.14167 2.43159 0.36004 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //