INFERNAL1/a [1.1.5 | Sep 2023] NAME MIR439 ACC RF01902 DESC microRNA MIR439 STATES 283 NODES 61 CLEN 93 W 109 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 22:30:20 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates_3/RF01902/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 0.734863 CKSUM 1141820431 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 90.20 NC 88.20 EFP7GF -6.2720 0.71904 ECMLC 0.63161 -5.28463 3.13334 1600000 244495 0.004908 ECMGC 0.41696 -15.45866 -2.72131 1600000 81023 0.004937 ECMLI 0.60004 -3.27148 4.81599 1600000 153722 0.007806 ECMGI 0.44225 -9.72107 1.36100 1600000 53770 0.007439 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 109 130 -6.350 -6.557 -0.229 -3.013 IL 1 1 2 1 4 1 24 113 134 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 112 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 23 110 130 -7.295 -0.033 -5.949 -0.370 -0.611 -1.010 1.053 D 4 2 3 5 3 0 18 108 128 -6.780 -2.293 -0.346 IL 5 5 3 5 3 1 23 111 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 23 108 129 -7.295 -0.033 -5.949 1.208 -1.113 -0.856 -0.567 D 7 5 3 8 3 0 18 107 127 -6.780 -1.433 -0.688 IL 8 8 3 8 3 1 22 110 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 22 107 127 -7.795 -0.084 -4.262 -0.319 0.660 -1.053 0.185 D 10 8 3 11 3 0 17 106 126 -5.838 -0.952 -1.103 IL 11 11 3 11 3 1 22 108 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 93 - G - - MR 12 11 3 14 3 1 22 106 126 -7.740 -0.029 -6.057 -0.245 -1.193 1.043 -0.603 D 13 11 3 14 3 0 15 104 125 -6.915 -2.093 -0.401 IR 14 14 3 14 3 1 21 107 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 92 - U - - MR 15 14 3 17 3 1 22 105 125 -7.740 -0.029 -6.057 -0.370 -0.611 -1.010 1.053 D 16 14 3 17 3 0 14 104 124 -6.915 -2.093 -0.401 IR 17 17 3 17 3 1 20 106 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 91 - G - - MR 18 17 3 20 5 1 21 104 124 -6.528 -0.058 -6.344 -6.556 -7.448 -0.245 -1.193 1.043 -0.603 D 19 17 3 20 5 0 13 103 123 -5.670 -0.768 -3.296 -2.841 -2.721 IR 20 20 3 20 5 1 18 105 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 90 c g - - MP 21 20 3 25 6 2 23 103 123 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 22 20 3 25 6 1 15 102 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 14 102 122 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 24 20 3 25 6 0 9 99 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 17 103 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 17 103 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 89 c g - - MP 27 26 6 31 6 2 22 101 121 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 28 26 6 31 6 1 14 100 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 14 100 120 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 30 26 6 31 6 0 8 97 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 16 101 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 17 101 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 88 u a - - MP 33 32 6 37 6 2 21 99 119 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.265 -2.988 -3.186 0.631 -2.365 -3.818 1.935 -2.975 -3.206 1.143 -3.613 -0.889 2.505 -3.431 -0.062 -2.100 ML 34 32 6 37 6 1 14 98 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 13 98 118 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.735 -0.638 -0.350 -0.138 D 36 32 6 37 6 0 8 95 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 16 99 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 16 99 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 87 G C - - MP 39 38 6 43 6 2 20 97 117 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.371 -2.399 -3.447 1.099 -3.612 -4.125 0.750 -3.636 -3.330 3.026 -3.788 0.299 0.404 -3.524 -1.224 -2.352 ML 40 38 6 43 6 1 13 96 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 13 96 116 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.128 0.156 -0.551 0.151 D 42 38 6 43 6 0 7 93 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 15 97 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 16 97 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 86 u a - - MP 45 44 6 49 6 2 19 95 115 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.265 -2.988 -3.186 0.631 -2.365 -3.818 1.935 -2.975 -3.206 1.143 -3.613 -0.889 2.505 -3.431 -0.062 -2.100 ML 46 44 6 49 6 1 12 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 12 94 114 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.735 -0.638 -0.350 -0.138 D 48 44 6 49 6 0 7 91 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 14 95 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 15 95 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 85 c g - - MP 51 50 6 55 6 2 17 93 113 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 52 50 6 55 6 1 12 92 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 11 92 112 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 54 50 6 55 6 0 6 89 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 14 93 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 14 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 84 G C - - MP 57 56 6 61 6 2 16 91 111 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.612 -2.569 -3.664 0.903 -3.636 -4.186 0.754 -3.772 -3.489 3.170 -3.917 -0.256 0.316 -3.704 -1.240 -2.556 ML 58 56 6 61 6 1 11 90 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 10 90 110 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.128 0.156 -0.551 0.151 D 60 56 6 61 6 0 6 87 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 13 91 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 13 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 83 a u - - MP 63 62 6 67 6 2 14 89 109 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.080 -2.318 -3.129 2.415 -3.078 -4.125 1.200 -3.183 -3.059 1.920 -3.562 0.057 0.757 -3.447 -0.758 -2.015 ML 64 62 6 67 6 1 10 88 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 9 88 108 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.117 -0.375 -0.472 0.510 D 66 62 6 67 6 0 6 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 12 89 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 12 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 82 a u - - MP 69 68 6 73 6 2 12 87 107 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.080 -2.318 -3.129 2.415 -3.078 -4.125 1.200 -3.183 -3.059 1.920 -3.562 0.057 0.757 -3.447 -0.758 -2.015 ML 70 68 6 73 6 1 9 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 8 86 106 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.117 -0.375 -0.472 0.510 D 72 68 6 73 6 0 5 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 10 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 10 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 81 c g - - MP 75 74 6 79 4 2 11 85 105 -6.280 -6.487 -0.085 -4.901 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 76 74 6 79 4 1 8 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 6 85 105 -5.022 -4.051 -1.919 -0.634 0.235 -0.642 0.354 -0.145 D 78 74 6 79 4 0 5 84 104 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 10 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 9 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - U - - - ML 81 80 6 83 3 1 9 83 103 -7.356 -0.032 -6.010 -0.465 -0.676 -1.116 1.130 D 82 80 6 83 3 0 4 81 101 -6.518 -2.031 -0.426 IL 83 83 3 83 3 1 9 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - g - - - ML 84 83 3 86 3 1 8 82 102 -7.356 -0.032 -6.010 -0.014 -0.267 0.302 -0.080 D 85 83 3 86 3 0 4 80 100 -6.518 -2.031 -0.426 IL 86 86 3 86 3 1 8 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - A - - - ML 87 86 3 89 3 1 7 81 100 -7.795 -0.028 -6.113 1.280 -1.219 -0.957 -0.675 D 88 86 3 89 3 0 3 80 99 -5.838 -0.605 -1.621 IL 89 89 3 89 3 1 7 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 80 - U - - MR 90 89 3 92 3 1 7 80 99 -7.852 -0.027 -6.169 -0.562 -0.746 -1.223 1.200 D 91 89 3 92 3 0 2 78 98 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 6 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 79 - U - - MR 93 92 3 95 3 1 6 79 98 -7.852 -0.027 -6.169 -0.562 -0.746 -1.223 1.200 D 94 92 3 95 3 0 1 77 97 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 5 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 78 - G - - MR 96 95 3 98 5 1 6 78 97 -6.630 -0.108 -6.445 -4.477 -7.549 -0.466 -1.468 1.241 -0.863 D 97 95 3 98 5 0 1 77 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 4 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 77 c g - - MP 99 98 3 103 6 2 7 77 96 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 100 98 3 103 6 1 2 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 2 75 95 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 102 98 3 103 6 0 0 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 3 77 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 3 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 76 G C - - MP 105 104 6 109 6 2 5 75 94 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.612 -2.569 -3.664 0.903 -3.636 -4.186 0.754 -3.772 -3.489 3.170 -3.917 -0.256 0.316 -3.704 -1.240 -2.556 ML 106 104 6 109 6 1 2 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 2 74 93 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.128 0.156 -0.551 0.151 D 108 104 6 109 6 0 0 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 3 75 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 3 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 75 c g - - MP 111 110 6 115 4 2 3 73 92 -6.280 -6.487 -0.085 -4.901 -3.281 -3.120 -3.164 0.499 -2.216 -3.722 2.777 -2.898 -3.206 0.937 -3.580 -1.125 1.399 -3.404 0.535 -2.096 ML 112 110 6 115 4 1 1 73 93 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 72 92 -5.022 -4.051 -1.919 -0.634 0.235 -0.642 0.354 -0.145 D 114 110 6 115 4 0 0 71 91 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 2 74 94 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 2 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - A - - - ML 117 116 6 119 3 1 2 70 90 -7.795 -0.028 -6.113 1.280 -1.219 -0.957 -0.675 D 118 116 6 119 3 0 0 69 88 -5.838 -0.605 -1.621 IL 119 119 3 119 3 1 1 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 74 - C - - MR 120 119 3 122 5 1 2 69 89 -6.630 -0.108 -6.445 -4.477 -7.549 -0.562 1.048 -1.311 -0.231 D 121 119 3 122 5 0 0 68 87 -5.352 -0.707 -2.978 -4.409 -2.404 IR 122 122 3 122 5 1 1 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 73 G C - - MP 123 122 3 127 6 2 3 68 88 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.612 -2.569 -3.664 0.903 -3.636 -4.186 0.754 -3.772 -3.489 3.170 -3.917 -0.256 0.316 -3.704 -1.240 -2.556 ML 124 122 3 127 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 3 127 6 1 1 67 86 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.128 0.156 -0.551 0.151 D 126 122 3 127 6 0 0 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 72 u a - - MP 129 128 6 133 6 2 3 66 86 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.265 -2.988 -3.186 0.631 -2.365 -3.818 1.935 -2.975 -3.206 1.143 -3.613 -0.889 2.505 -3.431 -0.062 -2.100 ML 130 128 6 133 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 65 84 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.735 -0.638 -0.350 -0.138 D 132 128 6 133 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 71 u a - - MP 135 134 6 139 6 2 2 64 84 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.265 -2.988 -3.186 0.631 -2.365 -3.818 1.935 -2.975 -3.206 1.143 -3.613 -0.889 2.505 -3.431 -0.062 -2.100 ML 136 134 6 139 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 63 82 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.735 -0.638 -0.350 -0.138 D 138 134 6 139 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 70 c g - - MP 141 140 6 145 6 2 2 62 82 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 142 140 6 145 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 61 80 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 144 140 6 145 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 69 G C - - MP 147 146 6 151 6 2 2 60 80 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.612 -2.569 -3.664 0.903 -3.636 -4.186 0.754 -3.772 -3.489 3.170 -3.917 -0.256 0.316 -3.704 -1.240 -2.556 ML 148 146 6 151 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 59 78 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.128 0.156 -0.551 0.151 D 150 146 6 151 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 68 a u - - MP 153 152 6 157 6 2 2 58 78 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.080 -2.318 -3.129 2.415 -3.078 -4.125 1.200 -3.183 -3.059 1.920 -3.562 0.057 0.757 -3.447 -0.758 -2.015 ML 154 152 6 157 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 57 76 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.117 -0.375 -0.472 0.510 D 156 152 6 157 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 67 c g - - MP 159 158 6 163 6 2 2 56 76 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.503 -3.256 -3.349 0.384 -2.363 -3.889 2.992 -3.048 -3.381 0.894 -3.734 -1.179 1.230 -3.626 -0.061 -2.263 ML 160 158 6 163 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 55 75 -7.174 -5.903 -1.812 -5.881 -0.699 -4.095 0.235 -0.642 0.354 -0.145 D 162 158 6 163 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 66 a u - - MP 165 164 6 169 4 2 2 54 74 -6.280 -6.487 -0.085 -4.901 -3.080 -2.318 -3.129 2.415 -3.078 -4.125 1.200 -3.183 -3.059 1.920 -3.562 0.057 0.757 -3.447 -0.758 -2.015 ML 166 164 6 169 4 1 1 55 74 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 54 73 -5.022 -4.051 -1.919 -0.634 0.117 -0.375 -0.472 0.510 D 168 164 6 169 4 0 0 53 73 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 56 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 29 - U - - - ML 171 170 6 173 3 1 1 52 71 -7.795 -0.028 -6.113 -0.465 -0.676 -1.116 1.130 D 172 170 6 173 3 0 0 50 69 -5.838 -0.605 -1.621 IL 173 173 3 173 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 65 - C - - MR 174 173 3 176 3 1 1 51 70 -7.852 -0.027 -6.169 -0.562 1.048 -1.311 -0.231 D 175 173 3 176 3 0 0 49 68 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 64 - C - - MR 177 176 3 179 3 1 1 50 69 -7.852 -0.027 -6.169 -0.562 1.048 -1.311 -0.231 D 178 176 3 179 3 0 0 48 67 -6.390 -1.568 -0.620 IR 179 179 3 179 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 63 - C - - MR 180 179 3 182 5 1 1 49 68 -6.630 -0.108 -6.445 -4.477 -7.549 -0.562 1.048 -1.311 -0.231 D 181 179 3 182 5 0 0 47 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 182 182 3 182 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 30 62 g c - - MP 183 182 3 187 6 2 2 48 67 -8.888 -8.827 -0.025 -7.603 -7.883 -8.278 -3.005 -2.112 -3.108 1.419 -3.295 -4.113 0.974 -3.221 -2.976 2.175 -3.476 1.809 0.606 -3.410 -0.964 -1.971 ML 184 182 3 187 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 3 187 6 1 1 46 65 -7.174 -5.903 -1.300 -5.881 -1.015 -4.095 0.128 0.156 -0.551 0.151 D 186 182 3 187 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 31 61 u a - - MP 189 188 6 193 6 2 2 46 65 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.322 -3.065 -3.241 0.561 -2.401 -3.871 1.899 -3.020 -3.260 1.038 -3.667 -0.971 2.607 -3.490 -0.098 -2.151 ML 190 188 6 193 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 32 60 a u - - MP 195 194 6 199 6 2 2 44 63 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -2.787 -2.270 -2.865 2.283 -2.817 -3.788 1.313 -3.018 -2.884 1.754 -3.393 -0.066 0.949 -3.076 -0.587 -0.867 ML 196 194 6 199 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 33 59 C G - - MP 201 200 6 205 6 2 2 42 61 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.585 -3.361 -3.421 0.292 -2.403 -3.952 3.067 -3.102 -3.454 0.763 -3.800 -1.290 1.185 -3.705 -0.102 -2.332 ML 202 200 6 205 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 34 58 C G - - MP 207 206 6 211 6 2 2 40 59 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.585 -3.361 -3.421 0.292 -2.403 -3.952 3.067 -3.102 -3.454 0.763 -3.800 -1.290 1.185 -3.705 -0.102 -2.332 ML 208 206 6 211 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 35 57 u a - - MP 213 212 6 217 6 2 2 38 57 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.322 -3.065 -3.241 0.561 -2.401 -3.871 1.899 -3.020 -3.260 1.038 -3.667 -0.971 2.607 -3.490 -0.098 -2.151 ML 214 212 6 217 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 36 56 g c - - MP 219 218 6 223 6 2 2 35 55 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.044 -2.118 -3.152 1.407 -3.382 -4.184 0.892 -3.262 -3.005 2.118 -3.506 1.984 0.527 -3.475 -1.044 -2.003 ML 220 218 6 223 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 222 218 6 223 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 223 223 5 223 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 37 55 u a - - MP 225 224 6 229 6 2 2 33 53 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.322 -3.065 -3.241 0.561 -2.401 -3.871 1.899 -3.020 -3.260 1.038 -3.667 -0.971 2.607 -3.490 -0.098 -2.151 ML 226 224 6 229 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 227 224 6 229 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 228 224 6 229 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 229 229 5 229 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 230 230 6 230 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 38 54 C G - - MP 231 230 6 235 6 2 2 31 51 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.585 -3.361 -3.421 0.292 -2.403 -3.952 3.067 -3.102 -3.454 0.763 -3.800 -1.290 1.185 -3.705 -0.102 -2.332 ML 232 230 6 235 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 233 230 6 235 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 234 230 6 235 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 235 235 5 235 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 236 236 6 236 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 39 53 G C - - MP 237 236 6 241 6 2 2 29 49 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.716 -2.617 -3.770 0.840 -3.787 -4.241 0.621 -3.896 -3.576 3.241 -3.995 -0.303 0.192 -3.776 -1.374 -2.662 ML 238 236 6 241 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 239 236 6 241 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 240 236 6 241 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 241 241 5 241 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 242 242 6 242 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 40 52 a u - - MP 243 242 6 247 6 2 2 27 47 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.119 -2.344 -3.169 2.530 -3.152 -4.193 1.123 -3.229 -3.098 1.856 -3.605 0.042 0.686 -3.501 -0.831 -2.052 ML 244 242 6 247 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 245 242 6 247 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 246 242 6 247 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 247 247 5 247 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 248 248 6 248 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 41 51 a u - - MP 249 248 6 253 6 2 2 25 45 -8.907 -8.847 -0.024 -7.623 -7.903 -8.298 -3.119 -2.344 -3.169 2.530 -3.152 -4.193 1.123 -3.229 -3.098 1.856 -3.605 0.042 0.686 -3.501 -0.831 -2.052 ML 250 248 6 253 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 251 248 6 253 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 252 248 6 253 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 253 253 5 253 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 254 254 6 254 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 42 50 c g - - MP 255 254 6 259 4 2 2 23 42 -6.350 -6.557 -0.081 -4.971 -3.349 -3.204 -3.224 0.427 -2.250 -3.776 2.851 -2.941 -3.264 0.838 -3.635 -1.212 1.365 -3.471 0.507 -2.151 ML 256 254 6 259 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 257 254 6 259 4 1 1 23 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 258 254 6 259 4 0 0 22 42 -4.568 -4.250 -2.265 -0.520 IL 259 259 5 259 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 260 260 6 260 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - U - - - ML 261 260 6 263 3 1 1 20 39 -7.419 -0.030 -6.073 -0.562 -0.746 -1.223 1.200 D 262 260 6 263 3 0 0 19 38 -6.174 -1.687 -0.566 IL 263 263 3 263 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 44 - G - - - ML 264 263 3 266 3 1 1 19 38 -7.419 -0.030 -6.073 -0.466 -1.468 1.241 -0.863 D 265 263 3 266 3 0 0 18 37 -6.174 -1.687 -0.566 IL 266 266 3 266 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 45 - U - - - ML 267 266 3 269 3 1 1 18 37 -7.419 -0.030 -6.073 -0.562 -0.746 -1.223 1.200 D 268 266 3 269 3 0 0 17 36 -6.174 -1.687 -0.566 IL 269 269 3 269 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 46 - G - - - ML 270 269 3 272 3 1 1 17 35 -7.419 -0.030 -6.073 -0.466 -1.468 1.241 -0.863 D 271 269 3 272 3 0 0 16 35 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 47 - G - - - ML 273 272 3 275 3 1 1 15 34 -7.419 -0.030 -6.073 -0.466 -1.468 1.241 -0.863 D 274 272 3 275 3 0 0 15 33 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 48 - U - - - ML 276 275 3 278 3 1 1 13 32 -7.419 -0.030 -6.073 -0.562 -0.746 -1.223 1.200 D 277 275 3 278 3 0 0 13 32 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 49 - U - - - ML 279 278 3 281 2 1 1 1 1 * 0.000 -0.562 -0.746 -1.223 1.200 D 280 278 3 281 2 0 0 0 0 * 0.000 IL 281 281 3 281 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 282 281 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MIR439 ACC RF01902 DESC microRNA MIR439 LENG 93 MAXL 191 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 22:30:20 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates_3/RF01902/CM NSEQ 7 EFFN 1.671387 CKSUM 1141820431 STATS LOCAL MSV -8.8681 0.71904 STATS LOCAL VITERBI -10.1846 0.71904 STATS LOCAL FORWARD -3.3300 0.71904 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.63273 1.38060 1.24720 1.32475 1.38629 1.38629 1.38629 1.38629 0.20042 3.69431 1.85310 1.46634 0.26236 0.00000 * 1 2.03115 2.10057 2.51435 0.40720 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.05899 3.55288 3.55288 1.46634 0.26236 2.11676 0.12831 2 0.31762 2.59974 2.38751 2.24461 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.05899 3.55288 3.55288 1.46634 0.26236 0.84382 0.56223 3 1.91288 0.66711 2.46021 1.37146 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 4 2.68830 0.40181 2.40917 1.75442 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 5 2.70065 0.39948 2.41389 1.75619 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 6 2.47464 1.55811 2.16181 0.52737 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 7 2.01802 2.53764 0.35668 2.43003 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 8 2.47777 1.55801 2.16281 0.52676 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 9 2.71151 0.39745 2.41801 1.75774 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 10 2.27153 2.71059 0.27374 2.66187 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 11 0.60811 2.22935 1.44745 2.18164 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 12 0.60811 2.22937 1.44745 2.18167 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 13 2.71209 0.39734 2.41823 1.75782 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 14 2.15772 2.20224 2.65063 0.35204 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 15 1.55291 1.55819 0.97380 1.60840 15 g - - - 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 16 0.26890 2.74338 2.51705 2.39988 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 17 2.70880 0.39795 2.41699 1.75736 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 18 2.27080 2.70995 0.27398 2.66091 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 19 2.43064 0.64596 2.15636 1.30153 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 20 0.26890 2.74338 2.51705 2.39988 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 21 2.26966 2.70894 0.27436 2.65940 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 22 2.47737 1.55802 2.16268 0.52684 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 23 2.47794 1.55800 2.16286 0.52673 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 24 2.71139 0.39747 2.41797 1.75772 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 25 2.27137 2.71045 0.27379 2.66166 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 26 0.60815 2.22928 1.44746 2.18151 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 27 2.71167 0.39742 2.41808 1.75776 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 28 0.60814 2.22930 1.44746 2.18155 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 29 2.15772 2.20224 2.65063 0.35204 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 1.74621 0.19169 30 1.72562 2.39377 0.46207 2.29588 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.05483 3.62394 3.62394 1.46634 0.26236 0.42904 1.05306 31 2.60512 1.64505 2.31262 0.45555 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 32 0.74549 2.06848 1.48175 1.76094 32 a - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 33 2.84631 0.34390 2.57629 1.85224 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 34 2.84670 0.34384 2.57645 1.85230 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 35 2.60711 1.64504 2.31333 0.45521 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 36 1.77510 2.53822 0.40988 2.43275 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 37 2.60718 1.64504 2.31336 0.45519 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 38 2.84697 0.34379 2.57656 1.85234 38 C - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 39 2.36147 2.86947 0.23682 2.81575 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 40 0.51717 2.37378 1.54924 2.32020 40 A - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 41 0.51717 2.37378 1.54924 2.32019 41 A - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 42 2.52816 0.58200 2.26800 1.35519 42 C - - < 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 43 2.28760 2.30802 2.78900 0.30442 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 44 2.33118 3.15232 0.22990 2.72639 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 45 2.28760 2.30802 2.78900 0.30442 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 46 2.33118 3.15232 0.22990 2.72639 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 47 2.33118 3.15232 0.22990 2.72639 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 48 2.28760 2.30802 2.78900 0.30442 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 49 2.28760 2.30802 2.78900 0.30442 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 50 1.82853 2.42866 0.43046 2.29280 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 51 2.54930 1.80429 2.18921 0.43809 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 52 2.54918 1.80429 2.18917 0.43811 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 53 3.02865 0.27730 2.69858 2.06759 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 54 2.12443 2.74174 0.29833 2.60392 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 55 0.51855 2.48933 1.48171 2.36018 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 56 2.64581 1.61873 2.34272 0.45439 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 57 0.51921 2.48745 1.48176 2.35756 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 58 2.11862 2.73501 0.30075 2.59503 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 59 2.11331 2.72886 0.30297 2.58693 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 60 2.17701 1.68559 1.87726 0.60097 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 61 0.52893 2.46028 1.48252 2.31985 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 62 2.41862 1.46615 2.19130 0.56498 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 63 2.42409 0.31105 2.98868 2.05252 63 C - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 64 2.42409 0.31105 2.98868 2.05252 64 C - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 65 2.42409 0.31105 2.98868 2.05252 65 C - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 66 2.41338 1.68848 2.05125 0.51565 66 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 67 2.02705 2.58425 0.34539 2.46653 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 68 2.40721 1.68850 2.05048 0.51674 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 69 2.85314 0.32364 2.53794 1.96756 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 70 2.01637 2.57475 0.35030 2.45093 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 71 0.60074 2.33023 1.40546 2.21581 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 72 0.60226 2.32441 1.40937 2.20466 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 73 2.71946 0.34758 2.49944 1.92714 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 74 2.42409 0.31105 2.98868 2.05252 74 C - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 75 1.75706 2.31126 0.48556 2.18074 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 76 2.77376 0.33740 2.51553 1.94402 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 77 1.97926 2.54166 0.36798 2.39731 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 78 2.33118 3.15232 0.22990 2.72639 78 G - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 79 2.28760 2.30802 2.78900 0.30442 79 U - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 80 2.28760 2.30802 2.78900 0.30442 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 81 2.03102 2.58778 0.34358 2.47236 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 82 2.41734 1.68846 2.05174 0.51496 82 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 83 2.41687 1.68846 2.05168 0.51504 83 U - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 84 2.88218 0.31892 2.54583 1.97585 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 85 2.02950 2.58643 0.34427 2.47013 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 86 0.59820 2.34003 1.39896 2.23473 86 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 87 2.64978 0.46922 2.36247 1.56230 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 88 0.59868 2.33815 1.40020 2.23108 88 A - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 89 2.02110 2.57896 0.34811 2.45784 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.05101 3.69431 3.69431 1.46634 0.26236 1.09861 0.40547 90 2.01560 2.57407 0.35066 2.44982 90 G - - > 1.38629 1.38629 1.38629 1.38629 0.20042 3.69431 1.85310 1.46634 0.26236 1.09861 0.40547 91 2.01978 2.78302 0.34147 2.35660 91 G - - : 1.38629 1.38629 1.38629 1.38629 0.05899 3.55288 3.55288 1.46634 0.26236 2.11676 0.12831 92 2.03115 2.10057 2.51435 0.40720 92 U - - : 1.38629 1.38629 1.38629 1.38629 0.05899 3.55288 3.55288 1.46634 0.26236 2.11676 0.12831 93 2.01978 2.78302 0.34147 2.35660 93 G - - : 1.38629 1.38629 1.38629 1.38629 0.02993 3.52382 * 1.46634 0.26236 0.00000 * //