INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-142 ACC RF01896 DESC microRNA mir-142 STATES 259 NODES 69 CLEN 85 W 101 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 16:36:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01896/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 37 EFFN 1.630493 CKSUM 301532000 NULL 0.000 0.000 0.000 0.000 GA 57.00 TC 57.00 NC 54.40 EFP7GF -6.9752 0.71876 ECMLC 0.61732 -6.82716 2.32141 1600000 340332 0.003526 ECMGC 0.49346 -12.54395 -1.85054 1600000 78298 0.005109 ECMLI 0.60410 -4.34812 3.89666 1600000 174689 0.006869 ECMGI 0.53027 -7.55582 1.68971 1600000 53855 0.007427 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 101 121 -6.820 -7.027 -0.325 -2.434 IL 1 1 2 1 4 1 23 105 126 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 23 104 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 23 101 121 -7.612 -0.026 -6.266 -0.938 1.309 -1.719 -0.521 D 4 2 3 5 3 0 16 99 119 -7.359 -2.514 -0.288 IL 5 5 3 5 3 1 22 103 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 23 100 120 -7.630 -0.026 -6.284 1.528 -1.714 -1.411 -1.199 D 7 5 3 8 3 0 16 98 118 -7.302 -2.455 -0.302 IL 8 8 3 8 3 1 21 102 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 22 99 119 -7.647 -0.026 -6.301 -0.910 -2.010 1.505 -1.395 D 10 8 3 11 3 0 15 97 117 -7.243 -2.126 -0.388 IL 11 11 3 11 3 1 21 101 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 21 98 118 -7.680 -0.025 -6.334 -0.981 -1.071 -1.683 1.436 D 13 11 3 14 3 0 15 96 116 -7.121 -2.262 -0.350 IL 14 14 3 14 3 1 20 100 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 21 97 117 -7.697 -0.025 -6.351 -1.012 -2.133 1.549 -1.518 D 16 14 3 17 3 0 14 95 115 -7.051 -2.564 -0.280 IL 17 17 3 17 3 1 20 99 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - C - - - ML 18 17 3 20 3 1 20 96 116 -7.697 -0.025 -6.351 -0.576 1.029 -1.069 -0.300 D 19 17 3 20 3 0 14 94 114 -7.051 -2.564 -0.280 IL 20 20 3 20 3 1 19 98 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 19 95 115 -7.697 -0.025 -6.351 1.348 -1.345 -1.214 -0.669 D 22 20 3 23 3 0 14 93 113 -7.051 -2.564 -0.280 IL 23 23 3 23 3 1 18 97 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - g - - - ML 24 23 3 26 3 1 19 94 114 -7.697 -0.025 -6.351 -0.294 -0.671 0.877 -0.476 D 25 23 3 26 3 0 13 92 112 -7.051 -2.564 -0.280 IL 26 26 3 26 3 1 18 96 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 18 93 113 -7.697 -0.025 -6.351 -0.782 -0.715 -1.496 1.296 D 28 26 3 29 3 0 13 91 111 -7.051 -2.564 -0.280 IL 29 29 3 29 3 1 17 95 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 17 92 112 -7.697 -0.025 -6.351 -1.118 1.401 -1.912 -0.662 D 31 29 3 32 3 0 12 90 110 -7.051 -1.957 -0.444 IL 32 32 3 32 3 1 17 94 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 16 91 111 -7.727 -0.024 -6.381 1.594 -1.900 -1.579 -1.400 D 34 32 3 35 3 0 12 89 109 -6.918 -1.676 -0.559 IL 35 35 3 35 3 1 16 93 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - c - - - ML 36 35 3 38 3 1 15 90 109 -7.766 -0.024 -6.420 -0.603 0.709 -1.377 0.403 D 37 35 3 38 3 0 11 88 108 -6.721 -2.234 -0.362 IL 38 38 3 38 3 1 15 92 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 14 89 108 -8.170 -0.186 -3.087 -0.910 1.206 -1.708 -0.227 D 40 38 3 41 3 0 11 87 107 -5.977 -1.090 -0.959 IL 41 41 3 41 3 1 15 90 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 86 - U - - MR 42 41 3 44 3 1 16 88 107 -8.007 -0.024 -6.325 -0.426 -0.700 -0.897 1.073 D 43 41 3 44 3 0 9 85 105 -7.507 -2.685 -0.253 IR 44 44 3 44 3 1 15 89 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 85 - G - - MR 45 44 3 47 3 1 16 87 106 -8.007 -0.024 -6.325 -0.793 -1.869 1.449 -1.255 D 46 44 3 47 3 0 9 85 104 -7.507 -2.160 -0.376 IR 47 47 3 47 3 1 14 88 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 84 - U - - MR 48 47 3 50 3 1 15 86 105 -8.040 -0.023 -6.357 -0.890 -0.998 -1.583 1.393 D 49 47 3 50 3 0 8 83 103 -7.405 -2.583 -0.274 IR 50 50 3 50 3 1 14 87 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 83 - C - - MR 51 50 3 53 3 1 15 85 104 -8.040 -0.023 -6.357 -0.963 1.323 -1.746 -0.540 D 52 50 3 53 3 0 8 83 102 -7.405 -2.298 -0.339 IR 53 53 3 53 3 1 13 86 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 82 - A - - MR 54 53 3 56 3 1 14 84 103 -8.055 -0.023 -6.373 1.536 -1.736 -1.432 -1.223 D 55 53 3 56 3 0 7 82 101 -7.352 -2.530 -0.285 IR 56 56 3 56 3 1 13 85 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 81 - U - - MR 57 56 3 59 3 1 13 83 102 -8.055 -0.023 -6.373 -0.547 -0.248 -1.268 1.041 D 58 56 3 59 3 0 7 81 100 -7.352 -2.233 -0.356 IR 59 59 3 59 3 1 12 84 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 80 - G - - MR 60 59 3 62 3 1 13 82 101 -8.072 -0.023 -6.389 -0.935 -2.040 1.517 -1.425 D 61 59 3 62 3 0 7 80 99 -7.294 -2.471 -0.298 IR 62 62 3 62 3 1 12 83 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 79 - U - - MR 63 62 3 65 3 1 12 81 100 -8.072 -0.023 -6.389 -0.947 -1.044 -1.646 1.421 D 64 62 3 65 3 0 6 79 98 -7.294 -2.471 -0.298 IR 65 65 3 65 3 1 11 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 78 - G - - MR 66 65 3 68 3 1 12 80 99 -8.072 -0.023 -6.389 -0.367 -0.964 1.045 -0.624 D 67 65 3 68 3 0 6 78 98 -7.294 -2.108 -0.393 IR 68 68 3 68 3 1 11 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 77 - A - - MR 69 68 3 71 3 1 11 79 98 -8.092 -0.022 -6.410 1.564 -1.812 -1.500 -1.304 D 70 68 3 71 3 0 5 77 97 -7.217 -1.333 -0.745 IR 71 71 3 71 3 1 10 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 76 - G - - MR 72 71 3 74 3 1 10 78 97 -8.166 -0.021 -6.484 -1.148 -2.295 1.601 -1.679 D 73 71 3 74 3 0 4 76 96 -6.883 -1.440 -0.683 IR 74 74 3 74 3 1 9 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 75 - U - - MR 75 74 3 77 3 1 10 77 96 -8.201 -0.021 -6.519 -1.188 -1.238 -1.905 1.521 D 76 74 3 77 3 0 4 75 95 -6.684 -1.122 -0.914 IR 77 77 3 77 3 1 8 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 74 - A - - MR 78 77 3 80 3 1 9 76 95 -8.244 -0.020 -6.562 1.427 -1.625 -0.925 -1.116 D 79 77 3 80 3 0 3 74 94 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 7 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 73 - G - - MR 81 80 3 83 5 1 9 75 94 -6.991 -0.042 -6.806 -7.018 -7.910 -1.327 -2.506 1.658 -1.891 D 82 80 3 83 5 0 2 73 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 6 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 14 72 C G - - MP 84 83 3 88 6 2 10 74 93 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.313 -4.197 -4.042 -0.452 -2.814 -4.484 3.471 -3.600 -4.084 -0.175 -4.369 -2.141 0.723 -4.397 -0.516 -2.932 ML 85 83 3 88 6 1 4 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 4 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 5 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 5 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 71 A U - - MP 90 89 6 94 6 2 10 72 91 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 91 89 6 94 6 1 3 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 3 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 5 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 5 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 16 70 U A - - MP 96 95 6 100 6 2 9 70 89 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.949 -3.765 -3.813 -0.079 -2.809 -4.399 1.514 -3.487 -3.821 0.214 -4.206 -1.672 3.199 -4.109 -0.491 -2.668 ML 97 95 6 100 6 1 3 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 5 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 17 69 A U - - MP 102 101 6 106 6 2 9 68 87 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 103 101 6 106 6 1 3 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 3 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 4 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 18 68 A U - - MP 108 107 6 112 6 2 8 66 85 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 109 107 6 112 6 1 3 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 3 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 4 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 4 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 19 67 A U - - MP 114 113 6 118 6 2 8 64 83 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 115 113 6 118 6 1 2 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 3 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 4 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 20 66 G C - - MP 120 119 6 124 6 2 7 62 81 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.514 -2.986 -4.595 0.349 -4.911 -4.603 -0.332 -4.819 -4.175 3.578 -4.529 -0.678 -0.724 -4.317 -2.357 -3.475 ML 121 119 6 124 6 1 2 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 3 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 3 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 21 65 U A - - MP 126 125 6 130 6 2 6 60 79 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.949 -3.765 -3.813 -0.079 -2.809 -4.399 1.514 -3.487 -3.821 0.214 -4.206 -1.672 3.199 -4.109 -0.491 -2.668 ML 127 125 6 130 6 1 2 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 2 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 3 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 3 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 22 64 A U - - MP 132 131 6 136 6 2 5 58 77 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 133 131 6 136 6 1 2 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 2 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 2 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 2 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 23 63 G C - - MP 138 137 6 142 4 2 3 56 75 -6.820 -7.027 -0.058 -5.441 -4.514 -2.986 -4.595 0.349 -4.911 -4.603 -0.332 -4.819 -4.175 3.578 -4.529 -0.678 -0.724 -4.317 -2.357 -3.475 ML 139 137 6 142 4 1 1 56 76 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 56 75 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 54 74 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 2 57 77 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 24 - A - - - ML 144 143 6 146 3 1 2 53 73 -7.846 -0.022 -6.500 1.427 -1.625 -0.925 -1.116 D 145 143 6 146 3 0 0 52 72 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 25 - A - - - ML 147 146 3 149 3 1 2 52 72 -8.244 -0.020 -6.562 1.218 -0.908 -0.973 -0.662 D 148 146 3 149 3 0 0 51 70 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 62 - C - - MR 150 149 3 152 3 1 1 51 71 -8.244 -0.020 -6.562 -1.057 1.294 -1.865 -0.335 D 151 149 3 152 3 0 0 50 69 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 61 - U - - MR 153 152 3 155 5 1 1 50 70 -6.991 -0.042 -6.806 -7.018 -7.910 -1.270 -1.305 -1.992 1.551 D 154 152 3 155 5 0 0 49 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 26 60 A U - - MP 156 155 3 160 6 2 2 49 69 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 157 155 3 160 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 27 59 g u - - MP 162 161 6 166 6 2 2 47 67 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.092 -0.534 -3.325 1.257 -3.862 -4.140 0.330 -3.456 -3.047 1.794 -3.453 2.552 0.043 -3.568 -1.538 -2.144 ML 163 161 6 166 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 28 58 C G - - MP 168 167 6 172 6 2 2 45 65 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.125 -4.055 -3.883 -0.313 -2.677 -4.340 3.378 -3.455 -3.925 -0.041 -4.231 -2.046 0.889 -4.207 -0.103 -2.775 ML 169 167 6 172 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 29 57 A U - - MP 174 173 6 178 6 2 2 43 63 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 175 173 6 178 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 39 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 30 56 C G - - MP 180 179 6 184 6 2 2 41 61 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.313 -4.197 -4.042 -0.452 -2.814 -4.484 3.471 -3.600 -4.084 -0.175 -4.369 -2.141 0.723 -4.397 -0.516 -2.932 ML 181 179 6 184 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 31 55 U A - - MP 186 185 6 190 6 2 2 39 59 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.949 -3.765 -3.813 -0.079 -2.809 -4.399 1.514 -3.487 -3.821 0.214 -4.206 -1.672 3.199 -4.109 -0.491 -2.668 ML 187 185 6 190 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 32 54 A U - - MP 192 191 6 196 6 2 2 37 57 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.602 -2.684 -3.633 3.193 -3.878 -4.925 0.410 -3.687 -3.534 1.284 -4.072 -0.192 -0.009 -4.144 -1.532 -2.479 ML 193 191 6 196 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 6 1 1 36 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 195 191 6 196 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 196 196 5 196 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 197 197 6 197 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 33 53 C G - - MP 198 197 6 202 4 2 2 35 55 -6.820 -7.027 -0.125 -3.907 -4.313 -4.197 -4.042 -0.452 -2.814 -4.484 3.471 -3.600 -4.084 -0.175 -4.369 -2.141 0.723 -4.397 -0.516 -2.932 ML 199 197 6 202 4 1 1 36 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 200 197 6 202 4 1 1 35 55 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 201 197 6 202 4 0 0 34 54 -4.568 -4.250 -2.265 -0.520 IL 202 202 5 202 4 1 1 37 57 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 203 203 6 203 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 34 - U - - - ML 204 203 6 206 3 1 1 33 52 -7.787 -0.023 -6.441 -1.165 -1.220 -1.880 1.513 D 205 203 6 206 3 0 0 31 51 -6.599 -1.039 -0.991 IL 206 206 3 206 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 35 - A - - - ML 207 206 3 209 3 1 1 32 51 -7.846 -0.022 -6.500 1.662 -2.134 -1.790 -1.654 D 208 206 3 209 3 0 0 30 50 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 36 - A - - - ML 210 209 3 212 3 1 1 31 50 -7.846 -0.331 -2.318 1.235 -0.991 -0.928 -0.696 D 211 209 3 212 3 0 0 29 49 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 37 - A - - - ML 213 212 3 215 3 1 1 30 49 -7.543 -0.028 -6.197 1.077 -0.700 -0.921 -0.422 D 214 212 3 215 3 0 0 28 47 -7.560 -0.442 -1.952 IL 215 215 3 215 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 38 - C - - - ML 216 215 3 218 3 1 1 28 47 -7.846 -0.022 -6.500 -0.864 1.246 -1.399 -0.515 D 217 215 3 218 3 0 0 27 46 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 39 - a - - - ML 219 218 3 221 3 1 1 27 46 -7.846 -0.022 -6.500 0.535 -0.653 -0.456 0.246 D 220 218 3 221 3 0 0 26 45 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 40 - g - - - ML 222 221 3 224 3 1 1 26 45 -7.846 -0.022 -6.500 -0.142 -0.141 0.204 0.049 D 223 221 3 224 3 0 0 25 44 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 41 - C - - - ML 225 224 3 227 3 1 1 25 44 -7.846 -0.022 -6.500 -0.678 1.042 -1.293 -0.141 D 226 224 3 227 3 0 0 24 43 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 42 - a - - - ML 228 227 3 230 3 1 1 24 43 -4.800 -0.069 -6.500 0.627 -0.783 -0.838 0.396 D 229 227 3 230 3 0 0 22 41 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 26 44 -1.536 -0.732 -4.236 0.000 0.000 0.000 0.000 [ MATL 59 ] 44 - c - - - ML 231 230 3 233 3 1 1 22 41 -7.846 -0.022 -6.500 -0.270 0.670 -0.903 0.063 D 232 230 3 233 3 0 0 21 40 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 45 - u - - - ML 234 233 3 236 3 1 1 21 40 -7.846 -0.022 -6.500 -0.375 -0.797 -0.579 0.988 D 235 233 3 236 3 0 0 20 39 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 46 - g - - - ML 237 236 3 239 3 1 1 20 39 -7.846 -0.022 -6.500 0.081 -0.560 0.511 -0.253 D 238 236 3 239 3 0 0 19 38 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 47 - c - - - ML 240 239 3 242 3 1 1 19 38 -7.846 -0.022 -6.500 -0.152 0.275 -0.161 -0.005 D 241 239 3 242 3 0 0 18 37 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 48 - A - - - ML 243 242 3 245 3 1 1 18 36 -7.846 -0.022 -6.500 1.161 -0.904 -1.100 -0.391 D 244 242 3 245 3 0 0 17 36 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 49 - g - - - ML 246 245 3 248 3 1 1 16 35 -7.846 -0.022 -6.500 -0.034 -0.153 0.358 -0.249 D 247 245 3 248 3 0 0 16 34 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 50 - a - - - ML 249 248 3 251 3 1 1 15 33 -7.846 -0.022 -6.500 0.489 -1.042 0.371 -0.291 D 250 248 3 251 3 0 0 15 33 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 51 - G - - - ML 252 251 3 254 3 1 1 13 32 -7.846 -0.022 -6.500 -0.494 -1.187 1.112 -0.536 D 253 251 3 254 3 0 0 13 32 -6.174 -1.687 -0.566 IL 254 254 3 254 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 52 - U - - - ML 255 254 3 257 2 1 1 1 1 * 0.000 -0.508 -0.926 -1.422 1.261 D 256 254 3 257 2 0 0 0 0 * 0.000 IL 257 257 3 257 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 258 257 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-142 ACC RF01896 DESC microRNA mir-142 LENG 85 MAXL 176 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 16:36:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01896/CM NSEQ 37 EFFN 2.208618 CKSUM 301532000 STATS LOCAL MSV -8.8998 0.71876 STATS LOCAL VITERBI -9.6493 0.71876 STATS LOCAL FORWARD -3.1604 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29421 1.54248 1.45108 1.28115 1.38629 1.38629 1.38629 1.38629 0.24195 3.86870 1.63980 1.46634 0.26236 0.00000 * 1 2.30892 0.35219 2.86781 1.96140 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.05184 3.67859 3.67859 1.46634 0.26236 1.97360 0.14961 2 0.24666 2.81912 2.58523 2.48222 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.05108 3.69285 3.69285 1.46634 0.26236 1.91849 0.15879 3 2.28681 3.10029 0.24283 2.67411 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.05035 3.70705 3.70705 1.46634 0.26236 1.57230 0.23265 4 2.29863 2.31705 2.80069 0.30074 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.04898 3.73384 3.73384 1.46634 0.26236 1.73533 0.19400 5 2.37459 3.20304 0.21802 2.77736 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 2.13374 0.12601 6 1.96182 0.54806 2.25856 1.73258 6 C - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 2.13374 0.12601 7 0.38213 2.45916 2.37488 1.97283 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 2.13374 0.12601 8 1.70153 1.89737 0.67407 1.84513 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 2.13374 0.12601 9 2.09521 1.97858 2.59989 0.40886 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 2.13374 0.12601 10 2.47231 0.29554 3.03898 2.09075 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.04828 3.74794 3.74794 1.46634 0.26236 1.41244 0.27912 11 0.20619 2.97885 2.72888 2.65672 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.04708 3.77255 3.77255 1.46634 0.26236 1.12914 0.39054 12 1.93094 0.81356 2.48562 1.11341 12 c - - : 1.38629 1.38629 1.38629 1.38629 0.04559 3.80399 3.80399 1.46634 0.26236 1.79180 0.18231 13 2.23324 0.44355 2.80410 1.65807 13 C - - : 1.38629 1.38629 1.38629 1.38629 0.04559 3.80399 3.80399 1.46634 0.26236 0.40544 1.09865 14 3.12298 0.25781 2.89333 2.05695 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 15 0.37005 2.69305 1.77567 2.62753 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 16 2.89699 1.84979 2.63943 0.33388 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 17 0.36992 2.69351 1.77574 2.62821 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 18 0.36996 2.69337 1.77572 2.62800 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 19 0.37001 2.69318 1.77569 2.62771 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 20 2.54234 3.17175 0.18049 3.11164 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 21 2.89517 1.84971 2.63865 0.33412 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 22 0.37017 2.69264 1.77560 2.62692 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 23 2.54153 3.17083 0.18068 3.11034 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 24 0.33100 2.69854 2.11367 2.36769 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 25 0.47836 2.07165 2.15889 1.97495 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 26 0.37014 2.69273 1.77562 2.62706 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 27 1.61041 2.66078 0.43126 2.51815 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 28 2.97874 0.32506 2.74307 1.81841 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 29 0.36984 2.69377 1.77578 2.62858 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 30 3.12945 0.25705 2.89634 2.05806 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 31 2.89653 1.84977 2.63923 0.33394 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 32 0.37004 2.69308 1.77567 2.62757 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 33 3.12711 0.25732 2.89525 2.05766 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.09254 3.86870 2.69563 1.46634 0.26236 1.09861 0.40547 34 2.45917 2.44911 2.96986 0.25256 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04480 3.82096 3.82096 1.46634 0.26236 0.48170 0.96163 35 0.16630 3.17425 2.90474 2.87145 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 36 0.46740 2.13835 2.11884 1.99989 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.30276 3.86870 1.42570 1.46634 0.26236 1.09861 0.40547 37 0.57691 1.91112 2.11424 1.77356 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05500 3.62094 3.62094 1.46634 0.26236 0.16025 1.91010 38 2.22895 0.40074 2.54550 1.93726 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 39 0.99299 1.87696 1.71334 1.21667 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 40 1.54075 1.46530 1.18625 1.38866 40 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 41 2.02237 0.55856 2.42527 1.57420 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 42 0.92178 1.99310 2.02374 1.09734 42 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08155 2.85730 3.86870 0.61587 0.77690 1.09861 0.40547 43 1.64517 0.84323 2.07362 1.38242 44 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 44 1.73630 2.03366 1.82055 0.63292 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 45 1.36993 1.79407 0.95634 1.63324 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 46 1.54789 1.14304 1.46982 1.43343 47 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 47 0.52137 2.07235 2.26467 1.73422 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 48 1.45979 1.47276 1.06688 1.63813 49 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 49 1.03827 2.18902 1.07809 1.64164 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 50 1.85875 2.31576 0.52619 1.86699 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 51 1.85497 2.16377 2.54314 0.43073 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 52 2.33377 3.06243 0.22250 2.88628 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 53 2.85467 2.06214 2.50564 0.30976 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 54 0.37903 2.82217 1.68669 2.64692 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 55 2.33512 3.06422 0.22208 2.88847 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 56 2.85800 2.06251 2.50685 0.30930 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 57 2.17085 2.90489 0.26565 2.74174 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 58 2.73044 1.46160 2.46606 0.48123 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 59 2.86512 2.06329 2.50945 0.30833 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 60 2.54919 2.52355 3.06404 0.22944 61 U - - - 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 61 2.36218 0.38688 2.94058 1.74999 62 C - - - 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 62 3.31354 0.21339 3.00418 2.24250 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 63 2.85320 2.06198 2.50510 0.30997 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 64 0.37924 2.82130 1.68662 2.64583 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 65 3.31631 0.21312 3.00539 2.24303 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 66 2.85520 2.06220 2.50583 0.30969 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 67 2.85621 2.06231 2.50620 0.30955 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 68 2.85748 2.06245 2.50666 0.30938 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 69 0.37862 2.82389 1.68683 2.64906 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 70 2.86127 2.06287 2.50804 0.30885 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 71 2.33892 3.06927 0.22090 2.89466 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 72 2.63306 3.50150 0.16029 3.07700 73 G - - : 1.38629 1.38629 1.38629 1.38629 0.04267 3.86870 3.86870 1.46634 0.26236 1.09861 0.40547 73 0.33100 2.69854 2.11367 2.36769 74 A - - : 1.38629 1.38629 1.38629 1.38629 0.08151 3.86870 2.85793 1.46634 0.26236 1.09861 0.40547 74 2.47896 2.46545 2.99060 0.24725 75 U - - : 1.38629 1.38629 1.38629 1.38629 0.07660 3.83152 2.95537 1.46634 0.26236 1.55767 0.23652 75 2.48787 3.33458 0.19021 2.90956 76 G - - : 1.38629 1.38629 1.38629 1.38629 0.11436 3.80066 2.45678 1.46634 0.26236 1.81635 0.17748 76 0.22424 2.90366 2.66126 2.57444 77 A - - : 1.38629 1.38629 1.38629 1.38629 0.06783 3.73521 3.17698 1.46634 0.26236 2.19536 0.11802 77 1.76980 2.14225 0.55718 1.97027 78 G - - : 1.38629 1.38629 1.38629 1.38629 0.04982 3.71721 3.71721 1.46634 0.26236 2.27530 0.10844 78 2.26864 2.29251 2.76889 0.31088 79 U - - : 1.38629 1.38629 1.38629 1.38629 0.04982 3.71721 3.71721 1.46634 0.26236 2.27530 0.10844 79 2.30858 3.12584 0.23638 2.69978 80 G - - : 1.38629 1.38629 1.38629 1.38629 0.06512 3.71721 3.25081 1.46634 0.26236 2.27530 0.10844 80 1.88044 1.57617 2.39004 0.59950 81 U - - : 1.38629 1.38629 1.38629 1.38629 0.05057 3.70266 3.70266 1.46634 0.26236 2.33457 0.10187 81 0.24128 2.83861 2.60276 2.50345 82 A - - : 1.38629 1.38629 1.38629 1.38629 0.06544 3.70266 3.25237 1.46634 0.26236 2.33457 0.10187 82 2.33197 0.34346 2.89207 1.97961 83 C - - : 1.38629 1.38629 1.38629 1.38629 0.05131 3.68854 3.68854 1.46634 0.26236 2.38820 0.09629 83 2.21752 2.25080 2.71451 0.32910 84 U - - : 1.38629 1.38629 1.38629 1.38629 0.08187 3.68854 2.92615 1.46634 0.26236 2.38820 0.09629 84 2.18549 2.98077 0.27566 2.55418 85 G - - : 1.38629 1.38629 1.38629 1.38629 0.05286 3.65953 3.65953 1.46634 0.26236 2.48800 0.08673 85 1.79680 1.96405 2.10606 0.55832 86 U - - : 1.38629 1.38629 1.38629 1.38629 0.02678 3.63344 * 1.46634 0.26236 0.00000 * //