# STOCKHOLM 1.0
#=GF ID lincRNA-p21_2
#=GF AC RF01890
#=GF DE LincRNA-p21 conserved region 2
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 70.0
#=GF NC 68.7
#=GF TC 73.9
#=GF SE Predicted; CMfinder; Eberhardt R
#=GF SS Predicted; CMfinder;
#=GF TP Gene; lncRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 26.30 -Z 2958934 CM SEQDB
#=GF DR SO; 0001463; lincRNA;
#=GF DR GO; 0042981; regulation of apoptotic process;
#=GF RN [1]
#=GF RM 20673990
#=GF RT A large intergenic noncoding RNA induced by p53 mediates global gene
#=GF RT repression in the p53 response.
#=GF RA Huarte M, Guttman M, Feldser D, Garber M, Koziol MJ, Kenzelmann-Broz D,
#=GF RA Khalil AM, Zuk O, Amit I, Rabani M, Attardi LD, Regev A, Lander ES, Jacks
#=GF RA T, Rinn JL
#=GF RL Cell. 2010;142:409-419.
#=GF CC LincRNA-p21 is an large intergenic non-coding RNA. Transcription of
#=GF CC lincRNA-p21 is induced by p53. It interacts with heterogeneous nuclear
#=GF CC riboprotein K (hnRNP-K) and has an important role in the p53-dependent
#=GF CC apoptotic responses to DNA damage [1].
#=GF WK Long_non-coding_RNA
#=GF SQ 2

AC167363.3/76459-76510     GUGGAGCUGUGGUUAGUUCCUUUGUGUGGCUUAACUGUUGGCCCAGUUUUCC
AABR05094644.1/38118-38169 GUGAAGCUGUGGUUCGUUCCUUUGUGUGGCUUAACUGUUGGCCCAGUUUUCC
#=GC SS_cons               ::::::::::::::::::::::::::::::::::::::::::::::::::::
#=GC RF                    GUGgAGCUGUGGUUaGUUCCUUUGUGUGGCUUAACUGUUGGCCCAGUUUUCC
//
