INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs2H2 ACC RF01863 DESC Trypanosomatid snoRNA TB10Cs2H2 STATES 205 NODES 53 CLEN 67 W 83 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 21:02:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01863/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.385742 CKSUM 461995240 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 103.40 NC 41.00 EFP7GF -7.9662 0.71904 ECMLC 0.65757 -6.15133 2.78330 1600000 427276 0.002808 ECMGC 0.49103 -14.27134 -2.46148 1600000 131980 0.003031 ECMLI 0.63155 -4.27875 4.16649 1600000 248617 0.004827 ECMGI 0.52164 -9.82687 0.50597 1600000 87679 0.004562 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 83 102 -6.706 -6.913 -0.063 -5.327 IL 1 1 2 1 4 1 15 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 15 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 15 83 102 -7.741 -0.024 -6.395 -1.217 1.445 -2.016 -0.739 D 4 2 3 5 3 0 10 81 101 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 14 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 14 82 101 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 7 5 3 8 3 0 9 80 100 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 13 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 1 13 81 100 -7.741 -0.024 -6.395 -1.217 1.445 -2.016 -0.739 D 10 8 3 11 3 0 8 79 99 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 12 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 12 80 99 -8.147 -0.022 -6.465 1.603 -1.928 -1.604 -1.430 D 13 11 3 14 3 0 7 78 98 -5.620 -0.734 -1.403 IL 14 14 3 14 3 1 11 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 67 - U - - MR 15 14 3 17 3 1 11 79 98 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 16 14 3 17 3 0 6 77 96 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 10 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 66 - U - - MR 18 17 3 20 3 1 11 78 97 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 19 17 3 20 3 0 5 76 95 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 9 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 65 - U - - MR 21 20 3 23 3 1 10 77 96 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 22 20 3 23 3 0 4 75 94 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 9 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 64 - A - - MR 24 23 3 26 3 1 9 76 95 -8.147 -0.022 -6.465 1.603 -1.928 -1.604 -1.430 D 25 23 3 26 3 0 3 74 93 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 8 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 63 - G - - MR 27 26 3 29 3 1 9 75 94 -8.147 -0.022 -6.465 -1.105 -2.244 1.585 -1.628 D 28 26 3 29 3 0 2 73 92 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 7 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 62 - A - - MR 30 29 3 32 3 1 8 74 93 -8.147 -0.022 -6.465 1.603 -1.928 -1.604 -1.430 D 31 29 3 32 3 0 2 72 92 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 7 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 61 - C - - MR 33 32 3 35 5 1 8 73 92 -6.901 -0.045 -6.716 -6.928 -7.820 -1.217 1.445 -2.016 -0.739 D 34 32 3 35 5 0 1 71 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 35 35 3 35 5 1 5 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 5 60 G C - - MP 36 35 3 40 6 2 9 72 91 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 37 35 3 40 6 1 3 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 3 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 4 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 5 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 59 G C - - MP 42 41 6 46 6 2 9 70 89 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 43 41 6 46 6 1 3 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 3 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 4 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 58 G C - - MP 48 47 6 52 6 2 8 67 87 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 49 47 6 52 6 1 2 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 2 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 3 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 4 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 57 A U - - MP 54 53 6 58 6 2 7 65 85 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.450 -2.574 -3.489 3.050 -3.661 -4.699 0.619 -3.550 -3.399 1.451 -3.929 -0.112 0.199 -3.942 -1.324 -2.347 ML 55 53 6 58 6 1 2 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 2 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 3 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 3 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 9 56 G C - - MP 60 59 6 64 6 2 5 63 83 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 61 59 6 64 6 1 2 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 10 55 U A - - MP 66 65 6 70 4 2 4 61 81 -6.706 -6.913 -0.063 -5.327 -3.757 -3.562 -3.640 0.108 -2.682 -4.242 1.635 -3.344 -3.651 0.440 -4.044 -1.473 3.070 -3.922 -0.369 -2.513 ML 67 65 6 70 4 1 1 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 61 81 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 60 80 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 2 63 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 2 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 11 - U - - - ML 72 71 6 74 3 1 3 59 78 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 73 71 6 74 3 0 0 58 77 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 12 - C - - - ML 75 74 3 77 3 1 2 58 77 -7.741 -0.024 -6.395 -1.217 1.445 -2.016 -0.739 D 76 74 3 77 3 0 0 57 76 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - U - - - ML 78 77 3 80 3 1 2 57 76 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 79 77 3 80 3 0 0 56 75 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - G - - - ML 81 80 3 83 3 1 2 56 75 -7.741 -0.024 -6.395 -1.105 -2.244 1.585 -1.628 D 82 80 3 83 3 0 0 54 74 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 15 - U - - - ML 84 83 3 86 3 1 1 55 74 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 85 83 3 86 3 0 0 53 73 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 16 - A - - - ML 87 86 3 89 3 1 1 54 73 -7.741 -0.024 -6.395 1.603 -1.928 -1.604 -1.430 D 88 86 3 89 3 0 0 52 72 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 17 - C - - - ML 90 89 3 92 3 1 1 52 72 -7.741 -0.024 -6.395 -1.217 1.445 -2.016 -0.739 D 91 89 3 92 3 0 0 51 70 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 18 - G - - - ML 93 92 3 95 3 1 1 51 70 -8.147 -0.022 -6.465 -1.105 -2.244 1.585 -1.628 D 94 92 3 95 3 0 0 50 69 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 54 - U - - MR 96 95 3 98 3 1 1 50 69 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 97 95 3 98 3 0 0 49 68 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 53 - U - - MR 99 98 3 101 3 1 1 49 68 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 100 98 3 101 3 0 0 48 67 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 52 - U - - MR 102 101 3 104 3 1 1 48 67 -8.147 -0.022 -6.465 -1.086 -1.156 -1.796 1.481 D 103 101 3 104 3 0 0 47 66 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 51 - A - - MR 105 104 3 107 3 1 1 47 66 -8.147 -0.022 -6.465 1.603 -1.928 -1.604 -1.430 D 106 104 3 107 3 0 0 46 65 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 50 - G - - MR 108 107 3 110 3 1 1 46 65 -8.147 -0.022 -6.465 -1.105 -2.244 1.585 -1.628 D 109 107 3 110 3 0 0 45 64 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 49 - C - - MR 111 110 3 113 3 1 1 45 64 -8.147 -0.022 -6.465 -1.217 1.445 -2.016 -0.739 D 112 110 3 113 3 0 0 44 63 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 48 - G - - MR 114 113 3 116 3 1 1 44 63 -8.147 -0.022 -6.465 -1.105 -2.244 1.585 -1.628 D 115 113 3 116 3 0 0 43 62 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 47 - A - - MR 117 116 3 119 5 1 1 43 62 -6.901 -0.045 -6.716 -6.928 -7.820 1.603 -1.928 -1.604 -1.430 D 118 116 3 119 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 119 119 3 119 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 19 46 C G - - MP 120 119 3 124 6 2 2 42 61 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.111 -3.973 -3.871 -0.250 -2.695 -4.339 3.388 -3.459 -3.909 0.065 -4.214 -1.916 0.859 -4.207 -0.394 -2.766 ML 121 119 3 124 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 3 124 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 3 124 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 20 45 C G - - MP 126 125 6 130 6 2 2 40 59 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.111 -3.973 -3.871 -0.250 -2.695 -4.339 3.388 -3.459 -3.909 0.065 -4.214 -1.916 0.859 -4.207 -0.394 -2.766 ML 127 125 6 130 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 21 44 g u - - MP 132 131 6 136 6 2 2 38 57 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.345 -2.231 -3.486 1.284 -3.979 -4.720 0.358 -3.551 -3.231 1.721 -3.740 2.725 -0.003 -3.975 -1.581 -2.251 ML 133 131 6 136 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 22 43 C G - - MP 138 137 6 142 6 2 2 36 55 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.111 -3.973 -3.871 -0.250 -2.695 -4.339 3.388 -3.459 -3.909 0.065 -4.214 -1.916 0.859 -4.207 -0.394 -2.766 ML 139 137 6 142 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 23 42 U A - - MP 144 143 6 148 6 2 2 34 53 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.757 -3.562 -3.640 0.108 -2.682 -4.242 1.635 -3.344 -3.651 0.440 -4.044 -1.473 3.070 -3.922 -0.369 -2.513 ML 145 143 6 148 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 24 41 g u - - MP 150 149 6 154 6 2 2 32 51 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.345 -2.231 -3.486 1.284 -3.979 -4.720 0.358 -3.551 -3.231 1.721 -3.740 2.725 -0.003 -3.975 -1.581 -2.251 ML 151 149 6 154 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 25 40 A U - - MP 156 155 6 160 6 2 2 30 49 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.450 -2.574 -3.489 3.050 -3.661 -4.699 0.619 -3.550 -3.399 1.451 -3.929 -0.112 0.199 -3.942 -1.324 -2.347 ML 157 155 6 160 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 26 39 G C - - MP 162 161 6 166 6 2 2 28 47 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 163 161 6 166 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 27 38 u g - - MP 168 167 6 172 6 2 2 26 45 -9.020 -8.959 -0.022 -7.736 -8.015 -8.410 -3.654 -3.554 -3.454 0.067 -2.359 -3.954 1.914 -3.086 -3.491 0.339 -3.830 -1.568 1.132 -3.778 2.663 -2.385 ML 169 167 6 172 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 28 37 G C - - MP 174 173 6 178 4 2 2 24 43 -6.706 -6.913 -0.063 -5.327 -4.310 -2.891 -4.380 0.479 -4.625 -4.517 -0.093 -4.584 -4.032 3.515 -4.402 -0.578 -0.492 -4.181 -2.109 -3.263 ML 175 173 6 178 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 4 1 1 24 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 177 173 6 178 4 0 0 23 43 -4.568 -4.250 -2.265 -0.520 IL 178 178 5 178 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 179 179 6 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 29 - G - - - ML 180 179 6 182 3 1 1 21 40 -7.741 -0.024 -6.395 -1.105 -2.244 1.585 -1.628 D 181 179 6 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 30 - U - - - ML 183 182 3 185 3 1 1 20 39 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 31 - A - - - ML 186 185 3 188 3 1 1 19 38 -7.741 -0.024 -6.395 1.603 -1.928 -1.604 -1.430 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - U - - - ML 189 188 3 191 3 1 1 18 36 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - U - - - ML 192 191 3 194 3 1 1 16 35 -7.741 -0.024 -6.395 -1.086 -1.156 -1.796 1.481 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - G - - - ML 195 194 3 197 3 1 1 15 33 -7.741 -0.024 -6.395 -1.105 -2.244 1.585 -1.628 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 35 - C - - - ML 198 197 3 200 3 1 1 13 32 -7.741 -0.024 -6.395 -1.217 1.445 -2.016 -0.739 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 36 - U - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -1.086 -1.156 -1.796 1.481 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs2H2 ACC RF01863 DESC Trypanosomatid snoRNA TB10Cs2H2 LENG 67 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 21:02:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01863/CM NSEQ 3 EFFN 1.819336 CKSUM 461995240 STATS LOCAL MSV -7.9744 0.71904 STATS LOCAL VITERBI -9.0733 0.71904 STATS LOCAL FORWARD -3.3878 0.71904 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.61920 1.40633 1.29657 1.26079 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 0.00000 * 1 2.52201 0.28049 3.09062 2.13019 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 2 2.36198 2.36904 2.86765 0.28056 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 3 2.52201 0.28049 3.09062 2.13019 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 4 0.20804 2.97083 2.72167 2.64793 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 5 2.41179 2.95658 0.21899 2.90003 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 6 2.41404 2.95890 0.21837 2.90336 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 7 2.41479 2.95968 0.21815 2.90448 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 8 0.47026 2.46197 1.61101 2.40561 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 9 2.41470 2.95958 0.21818 2.90435 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 10 2.68743 1.69935 2.40356 0.41742 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 11 2.36198 2.36904 2.86765 0.28056 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 12 2.52201 0.28049 3.09062 2.13019 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 13 2.36198 2.36904 2.86765 0.28056 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 14 2.41896 3.25470 0.20661 2.82929 14 G - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 15 2.36198 2.36904 2.86765 0.28056 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 16 0.20804 2.97083 2.72167 2.64793 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 17 2.52201 0.28049 3.09062 2.13019 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 18 2.41896 3.25470 0.20661 2.82929 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 19 2.92328 0.31688 2.66613 1.90848 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 20 2.92768 0.31624 2.66801 1.90918 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 21 1.80648 2.62287 0.38252 2.51286 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 22 2.92937 0.31599 2.66874 1.90945 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 23 2.68780 1.69936 2.40370 0.41736 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 24 1.80635 2.62265 0.38261 2.51255 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 25 0.47040 2.46161 1.61098 2.40505 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 26 2.41386 2.95872 0.21841 2.90310 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 27 2.69276 1.45264 2.44948 0.49100 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 28 2.41343 2.95827 0.21853 2.90246 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 29 2.41896 3.25470 0.20661 2.82929 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 30 2.36198 2.36904 2.86765 0.28056 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 31 0.20804 2.97083 2.72167 2.64793 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 32 2.36198 2.36904 2.86765 0.28056 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 33 2.36198 2.36904 2.86765 0.28056 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 34 2.41896 3.25470 0.20661 2.82929 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 35 2.52201 0.28049 3.09062 2.13019 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 36 2.36198 2.36904 2.86765 0.28056 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 37 3.11448 0.25641 2.78880 2.11793 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 38 1.95823 2.62209 0.35770 2.44231 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 39 3.11583 0.25625 2.78935 2.11820 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 40 2.63479 1.87484 2.27635 0.39716 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 41 2.72959 1.68496 2.42717 0.41398 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 42 0.47465 2.58273 1.53611 2.44058 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 43 2.18478 2.83630 0.27339 2.68742 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 44 2.73281 1.68498 2.42837 0.41349 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 45 2.18616 2.83799 0.27286 2.68959 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 46 2.18713 2.83916 0.27249 2.69111 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 47 0.20804 2.97083 2.72167 2.64793 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 48 2.41896 3.25470 0.20661 2.82929 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 49 2.52201 0.28049 3.09062 2.13019 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 50 2.41896 3.25470 0.20661 2.82929 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 51 0.20804 2.97083 2.72167 2.64793 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 52 2.36198 2.36904 2.86765 0.28056 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 53 2.36198 2.36904 2.86765 0.28056 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 54 2.36198 2.36904 2.86765 0.28056 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 55 0.47475 2.58240 1.53610 2.44014 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 56 3.11925 0.25584 2.79075 2.11886 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 57 2.63712 1.87500 2.27710 0.39676 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 58 3.12303 0.25539 2.79229 2.11959 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 59 3.12565 0.25508 2.79335 2.12010 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 60 3.12896 0.25469 2.79470 2.12073 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 61 2.52201 0.28049 3.09062 2.13019 61 C - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 62 0.20804 2.97083 2.72167 2.64793 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 63 2.41896 3.25470 0.20661 2.82929 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 64 0.20804 2.97083 2.72167 2.64793 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 65 2.36198 2.36904 2.86765 0.28056 65 U - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 66 2.36198 2.36904 2.86765 0.28056 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.04589 3.79746 3.79746 1.46634 0.26236 1.09861 0.40547 67 2.36198 2.36904 2.86765 0.28056 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.02321 3.77478 * 1.46634 0.26236 0.00000 * //