INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs4H2 ACC RF01862 DESC Trypanosomatid snoRNA TB10Cs4H2 STATES 205 NODES 53 CLEN 67 W 90 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 23:27:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01862/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.527344 CKSUM 2628033162 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 54.50 NC 48.70 EFP7GF -9.5472 0.72126 ECMLC 0.59893 -6.76952 2.58128 1600000 324651 0.003696 ECMGC 0.44632 -15.76900 -3.36915 1600000 101290 0.003949 ECMLI 0.59257 -5.41862 3.57738 1600000 247913 0.004840 ECMGI 0.45338 -12.33650 -0.66814 1600000 79351 0.005041 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 90 120 -7.174 -7.381 -0.045 -5.795 IL 1 1 2 1 4 1 17 93 122 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 92 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 90 120 -8.553 -0.016 -6.871 1.120 -0.332 -1.297 -0.678 D 4 2 3 5 3 0 12 89 118 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 91 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 70 - a - - MR 6 5 3 8 3 1 16 89 119 -8.553 -0.016 -6.871 0.483 -0.105 -1.084 0.263 D 7 5 3 8 3 0 10 87 117 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 90 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 69 - g - - MR 9 8 3 11 3 1 15 88 118 -8.553 -0.016 -6.871 0.228 -0.988 0.295 0.134 D 10 8 3 11 3 0 9 86 116 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 89 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 68 - U - - MR 12 11 3 14 3 1 15 87 117 -8.553 -0.016 -6.871 -1.885 -1.813 -2.636 1.715 D 13 11 3 14 3 0 8 85 115 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 88 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 67 - A - - MR 15 14 3 17 3 1 14 86 116 -8.553 -0.016 -6.871 1.797 -2.800 -2.390 -2.386 D 16 14 3 17 3 0 7 84 114 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 12 87 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 66 - G - - MR 18 17 3 20 3 1 14 85 115 -8.553 -0.016 -6.871 -2.026 -3.309 1.807 -2.697 D 19 17 3 20 3 0 6 83 113 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 12 86 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 65 - A - - MR 21 20 3 23 3 1 13 84 114 -8.553 -0.016 -6.871 1.797 -2.800 -2.390 -2.386 D 22 20 3 23 3 0 6 83 112 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 11 85 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 64 - G - - MR 24 23 3 26 5 1 13 83 113 -7.279 -0.034 -7.095 -7.307 -8.199 -2.026 -3.309 1.807 -2.697 D 25 23 3 26 5 0 5 82 111 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 9 84 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 2 63 C G - - MP 27 26 3 31 6 2 14 82 112 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -5.016 -4.962 -4.625 -1.158 -3.248 -4.975 3.673 -4.105 -4.694 -0.975 -4.900 -2.918 0.214 -5.053 -0.970 -3.519 ML 28 26 3 31 6 1 7 81 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 6 80 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 2 78 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 8 82 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 9 82 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 3 62 G C - - MP 33 32 6 37 6 2 13 80 110 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -4.293 -2.861 -4.319 0.591 -5.105 -4.677 -0.442 -4.709 -4.149 3.406 -4.520 0.815 -0.720 -4.182 -2.441 -3.210 ML 34 32 6 37 6 1 6 79 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 6 78 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 1 76 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 8 80 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 8 80 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 4 61 c g - - MP 39 38 6 43 6 2 12 78 108 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.538 -3.520 -3.493 0.168 -2.562 -4.139 2.321 -3.231 -3.497 0.352 -3.933 -1.554 2.270 -3.724 1.280 -2.403 ML 40 38 6 43 6 1 6 77 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 5 76 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 1 74 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 7 78 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 8 78 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 5 60 C G - - MP 45 44 6 49 6 2 11 76 106 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -5.016 -4.962 -4.625 -1.158 -3.248 -4.975 3.673 -4.105 -4.694 -0.975 -4.900 -2.918 0.214 -5.053 -0.970 -3.519 ML 46 44 6 49 6 1 5 75 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 5 74 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 1 72 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 7 76 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 7 76 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 59 u a - - MP 51 50 6 55 6 2 10 74 104 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.726 -3.713 -3.632 -0.044 -2.633 -4.222 1.673 -3.331 -3.649 0.147 -4.053 -1.768 2.804 -3.889 1.341 -2.547 ML 52 50 6 55 6 1 5 73 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 73 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 1 70 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 6 74 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 6 74 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 58 C G - - MP 57 56 6 61 6 2 8 72 102 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -4.016 -3.959 -3.835 -0.152 -2.662 -4.358 3.045 -3.408 -3.843 0.065 -4.205 -1.908 1.964 -4.127 -0.322 -2.688 ML 58 56 6 61 6 1 4 71 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 3 71 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 69 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 5 72 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 5 72 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 57 U G - - MP 63 62 6 67 4 2 7 70 100 -7.174 -7.381 -0.045 -5.795 -4.528 -4.465 -4.130 -0.760 -2.763 -4.485 1.532 -3.573 -4.175 -0.640 -4.423 -2.454 0.626 -4.570 3.242 -3.025 ML 64 62 6 67 4 1 3 70 99 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 1 69 99 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 68 97 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 5 71 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 4 70 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 9 - G - - - ML 69 68 6 71 3 1 5 68 98 -8.176 -0.018 -6.830 -2.026 -3.309 1.807 -2.697 D 70 68 6 71 3 0 0 66 96 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 69 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 10 - U - - - ML 72 71 3 74 3 1 5 67 97 -8.176 -0.018 -6.830 -1.885 -1.813 -2.636 1.715 D 73 71 3 74 3 0 0 65 95 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 68 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 11 - C - - - ML 75 74 3 77 3 1 4 66 96 -8.176 -0.018 -6.830 -2.260 1.739 -3.092 -1.571 D 76 74 3 77 3 0 0 64 94 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 67 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 12 - U - - - ML 78 77 3 80 3 1 4 65 95 -8.176 -0.018 -6.830 -1.885 -1.813 -2.636 1.715 D 79 77 3 80 3 0 0 63 93 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 2 66 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - A - - - ML 81 80 3 83 3 1 3 64 94 -8.176 -0.018 -6.830 1.797 -2.800 -2.390 -2.386 D 82 80 3 83 3 0 0 63 92 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 2 65 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - A - - - ML 84 83 3 86 3 1 2 63 93 -8.553 -0.016 -6.871 1.797 -2.800 -2.390 -2.386 D 85 83 3 86 3 0 0 62 91 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 64 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 56 - A - - MR 87 86 3 89 3 1 2 62 92 -8.553 -0.016 -6.871 1.797 -2.800 -2.390 -2.386 D 88 86 3 89 3 0 0 60 90 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 63 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 55 - C - - MR 90 89 3 92 3 1 2 61 91 -8.553 -0.016 -6.871 -2.260 1.739 -3.092 -1.571 D 91 89 3 92 3 0 0 59 89 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 62 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 54 - U - - MR 93 92 3 95 3 1 1 60 90 -8.553 -0.016 -6.871 -1.885 -1.813 -2.636 1.715 D 94 92 3 95 3 0 0 58 88 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 61 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 53 - U - - MR 96 95 3 98 3 1 1 59 89 -8.553 -0.016 -6.871 -1.885 -1.813 -2.636 1.715 D 97 95 3 98 3 0 0 57 87 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 60 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 52 - U - - MR 99 98 3 101 3 1 1 58 88 -8.553 -0.016 -6.871 -1.885 -1.813 -2.636 1.715 D 100 98 3 101 3 0 0 57 86 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 59 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 51 - A - - MR 102 101 3 104 5 1 1 57 87 -7.279 -0.034 -7.095 -7.307 -8.199 1.797 -2.800 -2.390 -2.386 D 103 101 3 104 5 0 0 56 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 57 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 15 50 C G - - MP 105 104 3 109 6 2 2 56 86 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -5.016 -4.962 -4.625 -1.158 -3.248 -4.975 3.673 -4.105 -4.694 -0.975 -4.900 -2.918 0.214 -5.053 -0.970 -3.519 ML 106 104 3 109 6 1 1 55 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 54 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 51 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 56 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 55 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 16 49 G C - - MP 111 110 6 115 6 2 2 54 84 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -4.024 -2.741 -4.026 1.597 -4.687 -4.597 -0.089 -4.392 -3.978 3.255 -4.371 -0.363 -0.387 -3.996 -2.080 -2.921 ML 112 110 6 115 6 1 1 53 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 52 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 50 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 54 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 53 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 17 48 c g - - MP 117 116 6 121 6 2 2 52 82 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.312 -2.819 -3.381 0.663 -2.869 -4.110 2.488 -3.301 -3.320 1.091 -3.763 1.563 0.959 -3.567 -0.553 -2.275 ML 118 116 6 121 6 1 1 51 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 50 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 48 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 52 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 51 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 18 47 c g - - MP 123 122 6 127 6 2 2 50 80 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.563 -3.051 -3.535 0.620 -2.965 -4.224 2.422 -3.462 -3.571 2.316 -4.004 -0.843 0.945 -3.668 -0.584 -2.423 ML 124 122 6 127 6 1 1 49 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 48 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 46 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 50 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 50 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 19 46 g c - - MP 129 128 6 133 6 2 2 48 78 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.197 -2.896 -3.224 0.710 -2.712 -3.960 2.058 -3.215 -3.277 2.133 -3.745 -0.824 1.136 -3.350 0.909 -2.175 ML 130 128 6 133 6 1 1 47 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 46 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 44 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 48 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 48 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 20 45 c g - - MP 135 134 6 139 6 2 2 46 76 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -3.908 -3.849 -3.763 -0.057 -2.645 -4.320 2.795 -3.372 -3.767 0.160 -4.149 -1.802 2.326 -4.038 -0.306 -2.622 ML 136 134 6 139 6 1 1 45 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 44 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 42 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 46 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 46 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 21 44 G C - - MP 141 140 6 145 6 2 2 44 74 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -4.026 -2.742 -4.027 1.594 -4.689 -4.598 -0.091 -4.393 -3.979 3.257 -4.372 -0.364 -0.389 -3.997 -2.082 -2.922 ML 142 140 6 145 6 1 1 43 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 43 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 40 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 44 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 44 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 22 43 C G - - MP 147 146 6 151 6 2 2 42 72 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -5.016 -4.962 -4.625 -1.158 -3.248 -4.975 3.673 -4.105 -4.694 -0.975 -4.900 -2.918 0.214 -5.053 -0.970 -3.519 ML 148 146 6 151 6 1 1 41 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 41 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 39 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 42 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 42 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 23 42 g c - - MP 153 152 6 157 4 2 2 40 70 -7.174 -7.381 -0.322 -2.419 -2.844 -2.288 0.222 1.699 -3.157 -3.740 0.790 -3.280 -3.041 2.532 -3.522 -0.161 0.541 -3.002 -0.988 -1.986 ML 154 152 6 157 4 1 1 40 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 39 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 38 68 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 41 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 40 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 24 - a - - - ML 159 158 6 161 3 1 1 38 68 -7.927 -0.021 -6.581 0.336 -0.090 -0.100 -0.209 D 160 158 6 161 3 0 0 37 67 -7.605 -0.426 -1.997 IL 161 161 3 161 3 1 1 39 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 25 - u - - - ML 162 161 3 164 3 1 1 37 67 -8.176 -0.018 -6.830 -0.883 0.548 -1.683 0.752 D 163 161 3 164 3 0 0 35 65 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 26 - G - - - ML 165 164 3 167 3 1 1 36 66 -8.176 -0.018 -6.830 -2.026 -3.309 1.807 -2.697 D 166 164 3 167 3 0 0 34 63 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 27 - C - - - ML 168 167 3 170 3 1 1 35 65 -2.622 -0.271 -6.830 -1.047 1.050 -1.881 0.231 D 169 167 3 170 3 0 0 30 60 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 37 67 -0.900 -1.187 -5.332 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - u - - - ML 171 170 3 173 3 1 1 24 43 -8.176 -0.018 -6.830 -0.376 -0.118 -0.300 0.581 D 172 170 3 173 3 0 0 23 42 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - g - - - ML 174 173 3 176 3 1 1 23 42 -8.176 -0.018 -6.830 0.264 -0.323 0.306 -0.390 D 175 173 3 176 3 0 0 22 41 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - c - - - ML 177 176 3 179 3 1 1 22 41 -8.176 -0.018 -6.830 0.056 0.911 -1.502 -0.459 D 178 176 3 179 3 0 0 21 40 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 180 179 3 182 3 1 1 21 40 -8.176 -0.018 -6.830 -0.603 -1.018 -0.333 1.038 D 181 179 3 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - a - - - ML 183 182 3 185 3 1 1 20 38 -8.176 -0.018 -6.830 0.780 0.190 -1.245 -0.474 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - U - - - ML 186 185 3 188 3 1 1 19 37 -8.176 -0.018 -6.830 0.018 -0.992 -1.356 1.066 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - g - - - ML 189 188 3 191 3 1 1 17 36 -8.176 -0.018 -6.830 0.228 -0.988 0.295 0.134 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - U - - - ML 192 191 3 194 3 1 1 16 35 -8.176 -0.018 -6.830 -1.885 -1.813 -2.636 1.715 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - C - - - ML 195 194 3 197 3 1 1 15 33 -8.176 -0.018 -6.830 -2.260 1.739 -3.092 -1.571 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - G - - - ML 198 197 3 200 3 1 1 13 31 -8.176 -0.018 -6.830 -0.595 -0.466 1.018 -0.764 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - u - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -0.332 -0.180 0.180 0.251 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs4H2 ACC RF01862 DESC Trypanosomatid snoRNA TB10Cs4H2 LENG 67 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 23:27:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01862/CM NSEQ 4 EFFN 3.347656 CKSUM 2628033162 STATS LOCAL MSV -8.2084 0.72126 STATS LOCAL VITERBI -9.0403 0.72126 STATS LOCAL FORWARD -3.3162 0.72126 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55268 1.37129 1.25957 1.38325 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 0.54943 1.60851 2.43342 2.00398 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 3.65189 0.15263 3.47627 2.46874 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 2.34869 3.16180 0.20656 3.02049 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 2.57618 1.11156 2.35676 0.69282 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 3.64927 0.15281 3.47487 2.46825 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 2.79124 1.65031 2.58049 0.39909 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.83774 0.57427 2.60624 1.18904 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 3.30830 1.79904 3.15058 0.28086 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 3.12882 4.05830 0.09172 3.62704 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 3.02117 2.91717 3.55201 0.14098 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 3.36351 0.12147 3.92825 2.81197 11 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 3.02117 2.91717 3.55201 0.14098 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 0.09782 3.66980 3.35405 3.41833 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 0.09782 3.66980 3.35405 3.41833 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 3.65181 0.15264 3.47623 2.46873 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 1.55610 2.89197 0.40025 2.75787 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 2.28415 0.91021 1.08640 1.84346 17 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 2.27574 0.98549 1.01457 1.82347 18 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 2.17425 1.26567 1.11270 1.28886 19 g - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 2.76573 0.75724 2.53177 0.94522 20 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 1.55774 2.89131 0.39990 2.75671 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 3.64283 0.15325 3.47144 2.46703 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 1.13178 2.25107 0.79999 2.09621 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.23562 4.12713 1.64097 1.46634 0.26236 1.09861 0.40547 24 1.15230 1.42267 1.43185 1.58888 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04002 3.93153 3.93153 1.46634 0.26236 0.15397 1.94699 25 2.15758 0.94755 2.72949 0.84059 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 3.12882 4.05830 0.09172 3.62704 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 2.29909 0.58316 2.90051 1.24994 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.23631 1.63816 4.12713 1.12125 0.39434 1.09861 0.40547 28 1.71833 1.45088 1.57750 0.96817 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 1.21406 1.59832 1.12182 1.74247 32 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.37444 0.66896 2.60200 1.82852 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 1.93233 2.21580 1.61720 0.60209 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 0.80023 1.20880 2.38134 1.83387 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 1.39417 2.19644 2.45564 0.58887 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 1.23595 2.14823 1.13894 1.29978 37 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 3.02117 2.91717 3.55201 0.14098 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 3.36351 0.12147 3.92825 2.81197 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 1.95666 1.71724 0.58629 2.09786 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 1.69004 1.49439 1.21378 1.22407 41 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 2.33495 0.89816 1.55726 1.25472 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 2.74654 3.63665 0.13184 3.41046 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 2.99181 0.45505 2.70549 1.39212 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 1.05169 2.70003 0.68597 2.52761 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 1.90748 1.19236 0.90552 1.93994 46 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 2.06920 1.08604 0.90640 2.02353 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 2.08598 2.12427 0.83709 1.12910 48 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 3.00055 0.45472 2.70848 1.39040 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 2.75800 3.65455 0.12972 3.43069 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 0.09782 3.66980 3.35405 3.41833 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 3.02117 2.91717 3.55201 0.14098 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 3.02117 2.91717 3.55201 0.14098 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 3.02117 2.91717 3.55201 0.14098 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 3.36351 0.12147 3.92825 2.81197 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 0.09782 3.66980 3.35405 3.41833 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 2.38121 3.33365 0.19324 3.04461 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 1.32449 2.77311 0.51562 2.59749 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 0.69890 2.74707 1.01766 2.55989 59 a - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 57 2.75026 3.64245 0.13115 3.41701 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 58 1.08141 2.52748 0.72248 2.34886 61 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 59 3.25298 0.35097 2.98303 1.57650 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 60 2.75802 3.65456 0.12971 3.43071 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 61 3.12882 4.05830 0.09172 3.62704 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 62 0.09782 3.66980 3.35405 3.41833 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 63 3.12882 4.05830 0.09172 3.62704 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 64 0.09782 3.66980 3.35405 3.41833 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 65 3.02117 2.91717 3.55201 0.14098 68 U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 66 1.23595 2.14823 1.13894 1.29978 69 g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 67 1.03052 1.44074 2.21361 1.21361 70 a - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //