INFERNAL1/a [1.1.4 | Dec 2020] NAME TB10Cs4H2 ACC RF01862 DESC Trypanosomatid snoRNA TB10Cs4H2 STATES 205 NODES 53 CLEN 67 W 91 ALPH RNA RF no CONS yes MAP yes DATE Fri Apr 11 11:07:58 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.535156 CKSUM 2628033162 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 55.10 NC 35.00 EFP7GF -9.5536 0.72129 ECMLC 0.59609 -6.81346 2.57552 1600000 323431 0.003710 ECMGC 0.43836 -16.04659 -3.41551 1600000 101557 0.003939 ECMLI 0.58994 -5.46416 3.56890 1600000 247470 0.004849 ECMGI 0.45925 -12.16155 -0.64175 1600000 79376 0.005039 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 91 121 -7.177 -7.384 -0.045 -5.798 IL 1 1 2 1 4 1 17 93 123 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 93 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 91 121 -8.555 -0.016 -6.873 1.137 -0.362 -1.306 -0.694 D 4 2 3 5 3 0 12 89 119 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 91 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 70 - a - - MR 6 5 3 8 3 1 16 90 120 -8.555 -0.016 -6.873 0.460 -0.054 -1.090 0.253 D 7 5 3 8 3 0 10 88 118 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 90 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 69 - g - - MR 9 8 3 11 3 1 15 89 119 -8.555 -0.016 -6.873 0.214 -0.972 0.258 0.182 D 10 8 3 11 3 0 9 87 117 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 89 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 68 - U - - MR 12 11 3 14 3 1 15 88 118 -8.555 -0.016 -6.873 -1.890 -1.817 -2.641 1.716 D 13 11 3 14 3 0 8 86 116 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 88 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 67 - A - - MR 15 14 3 17 3 1 14 87 117 -8.555 -0.016 -6.873 1.798 -2.806 -2.395 -2.392 D 16 14 3 17 3 0 7 85 115 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 12 87 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 66 - G - - MR 18 17 3 20 3 1 14 86 116 -8.555 -0.016 -6.873 -2.031 -3.315 1.808 -2.703 D 19 17 3 20 3 0 6 84 114 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 12 86 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 65 - A - - MR 21 20 3 23 3 1 13 85 115 -8.555 -0.016 -6.873 1.798 -2.806 -2.395 -2.392 D 22 20 3 23 3 0 6 83 113 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 11 85 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 64 - G - - MR 24 23 3 26 5 1 13 84 114 -7.282 -0.034 -7.097 -7.309 -8.201 -2.031 -3.315 1.808 -2.703 D 25 23 3 26 5 0 5 82 112 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 9 84 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 2 63 C G - - MP 27 26 3 31 6 2 14 83 113 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -5.022 -4.968 -4.630 -1.163 -3.252 -4.979 3.674 -4.109 -4.699 -0.981 -4.905 -2.925 0.209 -5.059 -0.974 -3.524 ML 28 26 3 31 6 1 7 81 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 6 1 6 81 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 3 31 6 0 2 78 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 8 82 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 9 82 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 3 62 G C - - MP 33 32 6 37 6 2 13 81 111 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -4.310 -2.870 -4.336 0.578 -5.124 -4.681 -0.457 -4.727 -4.160 3.415 -4.529 0.785 -0.735 -4.192 -2.457 -3.227 ML 34 32 6 37 6 1 6 79 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 6 79 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 1 76 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 8 80 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 8 80 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 4 61 c g - - MP 39 38 6 43 6 2 12 79 109 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.542 -3.522 -3.498 0.170 -2.564 -4.144 2.356 -3.234 -3.501 0.353 -3.937 -1.553 2.247 -3.728 1.250 -2.405 ML 40 38 6 43 6 1 6 77 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 5 77 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 1 74 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 7 78 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 8 78 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 5 60 C G - - MP 45 44 6 49 6 2 11 77 107 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -5.022 -4.968 -4.630 -1.163 -3.252 -4.979 3.674 -4.109 -4.699 -0.981 -4.905 -2.925 0.209 -5.059 -0.974 -3.524 ML 46 44 6 49 6 1 5 75 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 5 75 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 1 72 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 7 76 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 7 76 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 59 u a - - MP 51 50 6 55 6 2 10 75 105 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.714 -3.703 -3.620 -0.038 -2.624 -4.211 1.680 -3.321 -3.638 0.152 -4.042 -1.761 2.764 -3.878 1.428 -2.538 ML 52 50 6 55 6 1 5 73 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 73 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 1 70 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 6 74 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 6 74 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 58 C G - - MP 57 56 6 61 6 2 8 73 103 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -4.000 -3.942 -3.825 -0.136 -2.661 -4.354 3.013 -3.403 -3.832 0.080 -4.197 -1.891 2.018 -4.114 -0.320 -2.678 ML 58 56 6 61 6 1 4 72 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 3 71 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 69 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 5 72 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 5 72 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 57 U G - - MP 63 62 6 67 4 2 7 71 101 -7.177 -7.384 -0.045 -5.798 -4.533 -4.471 -4.134 -0.765 -2.766 -4.488 1.529 -3.576 -4.179 -0.646 -4.426 -2.460 0.623 -4.575 3.245 -3.029 ML 64 62 6 67 4 1 3 70 100 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 1 70 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 68 98 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 5 71 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 4 71 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 9 - G - - - ML 69 68 6 71 3 1 5 69 99 -8.178 -0.018 -6.832 -2.031 -3.315 1.808 -2.703 D 70 68 6 71 3 0 0 67 97 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 70 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 10 - U - - - ML 72 71 3 74 3 1 5 68 98 -8.178 -0.018 -6.832 -1.890 -1.817 -2.641 1.716 D 73 71 3 74 3 0 0 66 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 3 69 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 11 - C - - - ML 75 74 3 77 3 1 4 67 97 -8.178 -0.018 -6.832 -2.267 1.740 -3.098 -1.576 D 76 74 3 77 3 0 0 65 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 3 68 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 12 - U - - - ML 78 77 3 80 3 1 4 66 96 -8.178 -0.018 -6.832 -1.890 -1.817 -2.641 1.716 D 79 77 3 80 3 0 0 64 94 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 2 67 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - A - - - ML 81 80 3 83 3 1 3 65 95 -8.178 -0.018 -6.832 1.798 -2.806 -2.395 -2.392 D 82 80 3 83 3 0 0 63 93 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 2 66 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - A - - - ML 84 83 3 86 3 1 2 64 94 -8.555 -0.016 -6.873 1.798 -2.806 -2.395 -2.392 D 85 83 3 86 3 0 0 62 92 -5.620 -0.734 -1.403 IL 86 86 3 86 3 1 1 64 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 56 - A - - MR 87 86 3 89 3 1 2 63 93 -8.555 -0.016 -6.873 1.798 -2.806 -2.395 -2.392 D 88 86 3 89 3 0 0 61 91 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 63 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 55 - C - - MR 90 89 3 92 3 1 2 62 92 -8.555 -0.016 -6.873 -2.267 1.740 -3.098 -1.576 D 91 89 3 92 3 0 0 60 90 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 62 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 54 - U - - MR 93 92 3 95 3 1 1 61 91 -8.555 -0.016 -6.873 -1.890 -1.817 -2.641 1.716 D 94 92 3 95 3 0 0 59 89 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 61 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 53 - U - - MR 96 95 3 98 3 1 1 60 90 -8.555 -0.016 -6.873 -1.890 -1.817 -2.641 1.716 D 97 95 3 98 3 0 0 58 88 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 60 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 52 - U - - MR 99 98 3 101 3 1 1 59 89 -8.555 -0.016 -6.873 -1.890 -1.817 -2.641 1.716 D 100 98 3 101 3 0 0 57 87 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 59 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 51 - A - - MR 102 101 3 104 5 1 1 58 88 -7.282 -0.034 -7.097 -7.309 -8.201 1.798 -2.806 -2.395 -2.392 D 103 101 3 104 5 0 0 56 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 58 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 15 50 C G - - MP 105 104 3 109 6 2 2 57 87 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -5.022 -4.968 -4.630 -1.163 -3.252 -4.979 3.674 -4.109 -4.699 -0.981 -4.905 -2.925 0.209 -5.059 -0.974 -3.524 ML 106 104 3 109 6 1 1 55 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 55 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 52 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 56 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 56 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 16 49 G C - - MP 111 110 6 115 6 2 2 55 85 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.986 -2.722 -3.986 1.665 -4.643 -4.590 -0.056 -4.351 -3.952 3.222 -4.350 -0.342 -0.353 -3.972 -2.043 -2.882 ML 112 110 6 115 6 1 1 53 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 53 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 50 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 54 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 54 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 17 48 c g - - MP 117 116 6 121 6 2 2 53 83 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.315 -2.836 -3.382 0.657 -2.861 -4.114 2.510 -3.298 -3.323 1.080 -3.770 1.523 0.969 -3.569 -0.543 -2.275 ML 118 116 6 121 6 1 1 51 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 51 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 48 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 52 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 52 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 18 47 c g - - MP 123 122 6 127 6 2 2 51 81 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.565 -3.068 -3.537 0.607 -2.949 -4.227 2.453 -3.453 -3.570 2.280 -4.003 -0.862 0.958 -3.674 -0.570 -2.422 ML 124 122 6 127 6 1 1 49 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 49 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 46 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 50 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 50 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 19 46 c g - - MP 129 128 6 133 6 2 2 49 79 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.199 -2.910 -3.227 0.699 -2.700 -3.964 2.101 -3.208 -3.276 2.099 -3.746 -0.842 1.149 -3.356 0.892 -2.175 ML 130 128 6 133 6 1 1 47 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 47 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 44 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 48 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 48 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 20 45 c g - - MP 135 134 6 139 6 2 2 47 77 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -3.916 -3.857 -3.769 -0.063 -2.648 -4.325 2.815 -3.375 -3.773 0.153 -4.154 -1.809 2.303 -4.045 -0.309 -2.627 ML 136 134 6 139 6 1 1 45 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 45 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 42 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 46 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 46 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 21 44 G C - - MP 141 140 6 145 6 2 2 45 75 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -4.045 -2.751 -4.047 1.568 -4.712 -4.604 -0.109 -4.414 -3.992 3.271 -4.384 -0.375 -0.407 -4.009 -2.101 -2.941 ML 142 140 6 145 6 1 1 43 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 43 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 41 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 44 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 44 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 22 43 C G - - MP 147 146 6 151 6 2 2 43 73 -9.199 -9.138 -0.020 -7.915 -8.195 -8.590 -5.022 -4.968 -4.630 -1.163 -3.252 -4.979 3.674 -4.109 -4.699 -0.981 -4.905 -2.925 0.209 -5.059 -0.974 -3.524 ML 148 146 6 151 6 1 1 42 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 41 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 39 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 42 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 42 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 23 42 g c - - MP 153 152 6 157 4 2 2 41 71 -7.177 -7.384 -0.313 -2.457 -2.834 -2.290 0.341 1.689 -3.143 -3.740 0.792 -3.269 -3.030 2.510 -3.514 -0.166 0.545 -3.001 -0.981 -1.980 ML 154 152 6 157 4 1 1 40 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 40 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 39 69 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 42 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 41 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 24 - a - - - ML 159 158 6 161 3 1 1 39 69 -7.937 -0.021 -6.591 0.314 -0.034 -0.132 -0.204 D 160 158 6 161 3 0 0 38 68 -7.581 -0.434 -1.972 IL 161 161 3 161 3 1 1 40 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 25 - u - - - ML 162 161 3 164 3 1 1 38 68 -8.178 -0.018 -6.832 -0.888 0.584 -1.691 0.723 D 163 161 3 164 3 0 0 36 66 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 39 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 26 - G - - - ML 165 164 3 167 3 1 1 37 67 -8.178 -0.018 -6.832 -2.031 -3.315 1.808 -2.703 D 166 164 3 167 3 0 0 34 64 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 38 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 27 - C - - - ML 168 167 3 170 3 1 1 36 66 -2.513 -0.293 -6.832 -1.063 1.070 -1.898 0.206 D 169 167 3 170 3 0 0 31 61 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 38 68 -0.885 -1.202 -5.397 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - u - - - ML 171 170 3 173 3 1 1 24 43 -8.178 -0.018 -6.832 -0.379 -0.067 -0.322 0.562 D 172 170 3 173 3 0 0 23 42 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - a - - - ML 174 173 3 176 3 1 1 23 42 -8.178 -0.018 -6.832 0.306 -0.341 0.276 -0.390 D 175 173 3 176 3 0 0 22 41 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - c - - - ML 177 176 3 179 3 1 1 22 41 -8.178 -0.018 -6.832 0.026 0.934 -1.521 -0.468 D 178 176 3 179 3 0 0 21 40 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 180 179 3 182 3 1 1 21 40 -8.178 -0.018 -6.832 -0.615 -1.023 -0.364 1.055 D 181 179 3 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - a - - - ML 183 182 3 185 3 1 1 20 38 -8.178 -0.018 -6.832 0.808 0.154 -1.245 -0.486 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - U - - - ML 186 185 3 188 3 1 1 19 37 -8.178 -0.018 -6.832 -0.008 -1.000 -1.371 1.083 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - g - - - ML 189 188 3 191 3 1 1 17 36 -8.178 -0.018 -6.832 0.214 -0.972 0.258 0.182 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - U - - - ML 192 191 3 194 3 1 1 16 35 -8.178 -0.018 -6.832 -1.890 -1.817 -2.641 1.716 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - C - - - ML 195 194 3 197 3 1 1 15 33 -8.178 -0.018 -6.832 -2.267 1.740 -3.098 -1.576 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - g - - - ML 198 197 3 200 3 1 1 13 31 -8.178 -0.018 -6.832 -0.573 -0.383 0.967 -0.722 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - u - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -0.334 -0.127 0.147 0.243 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB10Cs4H2 ACC RF01862 DESC Trypanosomatid snoRNA TB10Cs4H2 LENG 67 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Apr 11 11:07:59 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 4 EFFN 3.347656 CKSUM 2628033162 STATS LOCAL MSV -8.1344 0.72129 STATS LOCAL VITERBI -9.0449 0.72129 STATS LOCAL FORWARD -3.3085 0.72129 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55251 1.36787 1.26276 1.38324 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 0.53807 1.63116 2.43937 2.01587 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 3.65189 0.15263 3.47627 2.46874 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 2.35649 3.16973 0.20473 3.02903 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 2.57168 1.08363 2.35147 0.71335 4 u - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 3.64927 0.15281 3.47487 2.46825 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 2.78620 1.64546 2.57626 0.40143 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.82360 0.59744 2.59142 1.15367 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 3.30830 1.79904 3.15058 0.28086 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 3.12882 4.05830 0.09172 3.62704 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 3.02117 2.91717 3.55201 0.14098 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 3.36351 0.12147 3.92825 2.81197 11 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 3.02117 2.91717 3.55201 0.14098 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 0.09782 3.66980 3.35405 3.41833 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 0.09782 3.66980 3.35405 3.41833 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 3.65181 0.15264 3.47623 2.46873 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 1.50561 2.86531 0.42167 2.73028 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 2.28605 0.89518 1.10851 1.83415 17 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 2.28403 0.96329 1.04026 1.81322 18 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 2.18049 1.23319 1.13769 1.29066 19 g - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 2.76840 0.74283 2.53445 0.96189 20 c - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 1.57774 2.90228 0.39174 2.76806 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 3.64283 0.15325 3.47144 2.46703 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 1.11210 2.25008 0.81486 2.09525 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.22892 4.12713 1.66878 1.46634 0.26236 1.09861 0.40547 24 1.16932 1.38093 1.45645 1.58467 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03976 3.93797 3.93797 1.46634 0.26236 0.15799 1.92319 25 2.15974 0.92138 2.73383 0.86344 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 3.12882 4.05830 0.09172 3.62704 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 2.31009 0.57001 2.91232 1.26983 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.25417 1.56873 4.12713 1.11970 0.39509 1.09861 0.40547 28 1.71985 1.41077 1.59527 0.98324 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 1.18054 1.61173 1.14596 1.74054 32 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.39872 0.65311 2.61652 1.83505 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 1.94158 2.21937 1.64170 0.59024 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 0.77934 1.23651 2.38075 1.84254 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 1.41473 2.20209 2.46695 0.57698 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 1.24614 2.13521 1.16687 1.26292 37 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 3.02117 2.91717 3.55201 0.14098 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 3.36351 0.12147 3.92825 2.81197 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 1.93461 1.65252 0.62264 2.06021 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 1.69043 1.45321 1.23907 1.23071 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 2.33319 0.91442 1.51913 1.26103 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 2.74654 3.63665 0.13184 3.41046 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 3.00275 0.44598 2.71673 1.41034 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 1.07019 2.70266 0.67259 2.53016 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 1.89629 1.21848 0.88802 1.94683 46 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 2.05886 1.11268 0.88505 2.03235 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 2.07653 2.12814 0.82253 1.15120 48 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 2.97364 0.47854 2.68109 1.34436 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 2.75800 3.65455 0.12972 3.43069 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 0.09782 3.66980 3.35405 3.41833 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 3.02117 2.91717 3.55201 0.14098 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 3.02117 2.91717 3.55201 0.14098 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 3.02117 2.91717 3.55201 0.14098 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 3.36351 0.12147 3.92825 2.81197 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 0.09782 3.66980 3.35405 3.41833 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 2.38121 3.33365 0.19324 3.04461 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 1.28459 2.75859 0.53723 2.58370 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 0.72593 2.74278 0.98337 2.55508 59 a - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 57 2.75026 3.64245 0.13115 3.41701 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 58 1.09974 2.52239 0.71162 2.34418 61 g - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 59 3.26115 0.34488 2.99133 1.59393 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 60 2.75802 3.65456 0.12971 3.43071 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 61 3.12882 4.05830 0.09172 3.62704 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 62 0.09782 3.66980 3.35405 3.41833 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 63 3.12882 4.05830 0.09172 3.62704 66 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 64 0.09782 3.66980 3.35405 3.41833 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 65 3.02117 2.91717 3.55201 0.14098 68 U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 66 1.24614 2.13521 1.16687 1.26292 69 g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 67 1.04912 1.40131 2.21859 1.22174 70 a - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //