INFERNAL1/a [1.1.4 | Dec 2020] NAME TB9Cs1H1 ACC RF01861 DESC Trypanosomatid snoRNA TB9Cs1H1 STATES 193 NODES 54 CLEN 63 W 90 ALPH RNA RF no CONS yes MAP yes DATE Fri Apr 11 10:57:22 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.746094 CKSUM 3921733990 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 59.10 NC 43.20 EFP7GF -8.4519 0.72052 ECMLC 0.62776 -6.98269 2.57225 1600000 483239 0.002483 ECMGC 0.43410 -18.27899 -4.86124 1600000 135419 0.002954 ECMLI 0.60837 -5.72226 3.69195 1600000 368575 0.003256 ECMGI 0.45087 -13.82839 -1.87992 1600000 87440 0.004575 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 90 124 -7.249 -7.456 -0.043 -5.870 IL 1 1 2 1 4 1 20 93 127 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 92 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 19 91 124 -8.619 -0.016 -6.937 1.201 -0.437 -1.382 -0.790 D 4 2 3 5 3 0 13 89 123 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 18 91 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 66 - A - - MR 6 5 3 8 3 1 18 90 123 -8.619 -0.016 -6.937 1.817 -2.942 -2.518 -2.543 D 7 5 3 8 3 0 12 88 121 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 17 90 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 65 - G - - MR 9 8 3 11 3 1 18 89 122 -8.619 -0.016 -6.937 -2.169 -3.470 1.828 -2.856 D 10 8 3 11 3 0 11 87 121 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 16 89 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 64 - A - - MR 12 11 3 14 3 1 17 88 121 -8.619 -0.016 -6.937 1.817 -2.942 -2.518 -2.543 D 13 11 3 14 3 0 10 86 120 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 15 88 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 63 - a - - MR 15 14 3 17 5 1 17 87 120 -7.342 -0.033 -7.157 -7.369 -8.261 0.745 -1.666 0.622 -1.090 D 16 14 3 17 5 0 9 85 119 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 13 87 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 62 G C - - MP 18 17 3 22 6 2 18 86 119 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -5.292 -3.361 -5.464 -0.180 -6.003 -4.901 -1.230 -5.731 -4.668 3.746 -4.970 -1.087 -1.602 -4.823 -3.300 -4.333 ML 19 17 3 22 6 1 11 84 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 11 84 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 6 81 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 13 85 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 13 85 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 61 C G - - MP 24 23 6 28 6 2 17 84 117 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -5.173 -5.132 -4.754 -1.319 -3.349 -5.083 3.705 -4.222 -4.831 -1.152 -5.017 -3.094 0.093 -5.199 -1.078 -3.652 ML 25 23 6 28 6 1 11 82 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 10 82 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 6 79 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 12 83 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 12 83 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 60 g c - - MP 30 29 6 34 6 2 16 82 115 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -3.782 -2.643 -3.791 2.250 -4.425 -4.635 0.079 -4.121 -3.801 2.888 -4.243 -0.231 -0.210 -3.907 -1.885 -2.678 ML 31 29 6 34 6 1 10 80 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 10 80 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 5 77 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 12 81 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 12 81 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 59 C G - - MP 36 35 6 40 6 2 14 80 113 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -5.173 -5.132 -4.754 -1.319 -3.349 -5.083 3.705 -4.222 -4.831 -1.152 -5.017 -3.094 0.093 -5.199 -1.078 -3.652 ML 37 35 6 40 6 1 10 78 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 9 78 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 5 75 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 11 79 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 11 79 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 58 A U - - MP 42 41 6 46 6 2 13 78 111 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -4.324 -3.230 -4.290 3.590 -4.913 -6.039 -0.576 -4.295 -4.175 0.502 -4.748 -0.630 -0.990 -5.127 -2.514 -3.103 ML 43 41 6 46 6 1 9 76 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 7 76 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 5 74 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 10 77 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 10 77 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 57 G C - - MP 48 47 6 52 4 2 11 76 109 -7.249 -7.456 -0.043 -5.870 -5.292 -3.361 -5.464 -0.180 -6.003 -4.901 -1.230 -5.731 -4.668 3.746 -4.970 -1.087 -1.602 -4.823 -3.300 -4.333 ML 49 47 6 52 4 1 8 75 109 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 4 1 6 74 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 51 47 6 52 4 0 4 73 107 -4.568 -4.250 -2.265 -0.520 IL 52 52 5 52 4 1 10 76 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 53 53 6 53 3 1 9 75 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 8 - a - - - ML 54 53 6 56 3 1 10 74 107 -8.246 -0.017 -6.900 0.611 -0.196 -1.112 0.185 D 55 53 6 56 3 0 4 72 105 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 8 74 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - a - - - ML 57 56 3 59 3 1 9 73 106 -8.246 -0.017 -6.900 0.707 0.324 -1.306 -0.492 D 58 56 3 59 3 0 3 71 104 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 8 73 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - u - - - ML 60 59 3 62 3 1 8 72 105 -8.246 -0.017 -6.900 0.160 -0.901 -0.211 0.569 D 61 59 3 62 3 0 2 70 103 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 7 72 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - A - - - ML 63 62 3 65 3 1 8 71 104 -8.246 -0.017 -6.900 1.817 -2.942 -2.518 -2.543 D 64 62 3 65 3 0 2 69 102 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 6 71 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - u - - - ML 66 65 3 68 3 1 7 70 103 -8.246 -0.017 -6.900 -0.522 -1.098 0.401 0.600 D 67 65 3 68 3 0 1 68 101 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 70 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - G - - - ML 69 68 3 71 3 1 6 69 102 -8.246 -0.017 -6.900 -2.169 -3.470 1.828 -2.856 D 70 68 3 71 3 0 0 67 101 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 5 69 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - A - - - ML 72 71 3 74 3 1 5 68 101 -8.246 -0.017 -6.900 1.817 -2.942 -2.518 -2.543 D 73 71 3 74 3 0 0 66 100 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 4 68 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - A - - - ML 75 74 3 77 3 1 5 67 100 -8.619 -0.016 -6.937 1.817 -2.942 -2.518 -2.543 D 76 74 3 77 3 0 0 65 99 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 3 67 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 56 - A - - MR 78 77 3 80 3 1 4 66 99 -8.619 -0.016 -6.937 1.261 -1.737 -0.199 -1.210 D 79 77 3 80 3 0 0 64 97 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 66 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 55 - a - - MR 81 80 3 83 3 1 3 65 98 -8.619 -0.016 -6.937 0.663 0.377 -1.314 -0.482 D 82 80 3 83 3 0 0 63 96 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 65 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 54 - A - - MR 84 83 3 86 3 1 3 64 97 -8.619 -0.016 -6.937 1.817 -2.942 -2.518 -2.543 D 85 83 3 86 3 0 0 62 95 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 64 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 53 - G - - MR 87 86 3 89 3 1 3 63 96 -8.619 -0.016 -6.937 -2.169 -3.470 1.828 -2.856 D 88 86 3 89 3 0 0 61 95 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 63 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 52 - C - - MR 90 89 3 92 3 1 2 62 95 -8.619 -0.016 -6.937 -2.432 1.768 -3.262 -1.710 D 91 89 3 92 3 0 0 60 94 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 62 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 51 - C - - MR 93 92 3 95 3 1 2 61 94 -8.619 -0.016 -6.937 -2.432 1.768 -3.262 -1.710 D 94 92 3 95 3 0 0 59 93 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 61 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 50 - G - - MR 96 95 3 98 5 1 1 60 93 -7.342 -0.033 -7.157 -7.369 -8.261 -2.169 -3.470 1.828 -2.856 D 97 95 3 98 5 0 0 58 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 60 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 49 a u - - MP 99 98 3 103 6 2 2 59 92 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -3.712 -2.602 -3.845 2.604 -4.716 -5.377 -0.412 -3.996 -3.628 1.219 -4.191 2.381 -0.629 -4.415 -2.300 -2.616 ML 100 98 3 103 6 1 1 57 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 57 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 54 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 58 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 58 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 48 C G - - MP 105 104 6 109 6 2 2 57 90 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -5.173 -5.132 -4.754 -1.319 -3.349 -5.083 3.705 -4.222 -4.831 -1.152 -5.017 -3.094 0.093 -5.199 -1.078 -3.652 ML 106 104 6 109 6 1 1 55 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 55 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 52 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 56 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 56 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 47 C G - - MP 111 110 6 115 6 2 2 55 89 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -4.135 -4.082 -3.932 -0.258 -2.723 -4.437 3.116 -3.480 -3.940 -0.051 -4.291 -2.026 1.900 -4.235 -0.380 -2.778 ML 112 110 6 115 6 1 1 53 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 53 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 50 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 54 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 54 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 46 a u - - MP 117 116 6 121 6 2 2 53 87 -9.230 -9.169 -0.019 -7.946 -8.225 -8.620 -3.689 -2.640 -3.743 2.800 -4.326 -4.864 0.070 -3.974 -3.681 2.364 -4.188 -0.174 -0.219 -4.043 -1.871 -2.592 ML 118 116 6 121 6 1 1 51 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 51 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 49 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 52 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 52 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 45 G C - - MP 123 122 6 127 4 2 2 51 85 -7.249 -7.456 -0.043 -5.870 -4.317 -2.880 -4.339 0.581 -5.173 -4.727 -0.494 -4.735 -4.179 3.382 -4.552 1.004 -0.767 -4.218 -2.492 -3.225 ML 124 122 6 127 4 1 1 50 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 49 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 48 82 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 1 51 85 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 50 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - U - - - ML 129 128 6 131 3 1 1 49 82 -8.246 -0.017 -6.900 -1.058 -0.118 -1.825 1.212 D 130 128 6 131 3 0 0 47 80 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 49 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - u - - - ML 132 131 3 134 3 1 1 48 81 -8.246 -0.017 -6.900 -0.522 -1.098 0.401 0.600 D 133 131 3 134 3 0 0 46 79 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 48 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - c - - - ML 135 134 3 137 3 1 1 47 80 -8.246 -0.017 -6.900 0.200 0.225 -0.198 -0.303 D 136 134 3 137 3 0 0 45 78 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - u - - - ML 138 137 3 140 3 1 1 46 79 -8.246 -0.017 -6.900 0.577 -0.987 -1.204 0.651 D 139 137 3 140 3 0 0 44 77 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 25 - u - - - ML 141 140 3 143 3 1 1 45 78 -8.246 -0.017 -6.900 -0.524 -1.114 0.462 0.552 D 142 140 3 143 3 0 0 43 76 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 45 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - G - - - ML 144 143 3 146 3 1 1 44 77 -8.246 -0.017 -6.900 -2.169 -3.470 1.828 -2.856 D 145 143 3 146 3 0 0 41 75 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 27 - C - - - ML 147 146 3 149 3 1 1 43 76 -8.246 -0.017 -6.900 -2.432 1.768 -3.262 -1.710 D 148 146 3 149 3 0 0 40 74 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 28 - g - - - ML 150 149 3 152 3 1 1 42 75 -8.246 -0.017 -6.900 0.155 -1.054 0.431 0.080 D 151 149 3 152 3 0 0 39 73 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 42 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - u - - - ML 153 152 3 155 3 1 1 41 74 -1.759 -0.522 -6.900 0.149 -0.901 -0.213 0.578 D 154 152 3 155 3 0 0 34 68 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 42 76 -0.784 -1.810 -2.899 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - A - - - ML 156 155 3 158 3 1 1 26 44 -8.020 -0.020 -6.674 1.742 -2.484 -2.105 -2.037 D 157 155 3 158 3 0 0 24 43 -7.569 -0.439 -1.960 IL 158 158 3 158 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - c - - - ML 159 158 3 161 3 1 1 24 43 -8.246 -0.017 -6.900 -0.009 0.985 -1.601 -0.521 D 160 158 3 161 3 0 0 23 42 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - u - - - ML 162 161 3 164 3 1 1 23 42 -8.246 -0.017 -6.900 -0.947 0.590 -1.755 0.749 D 163 161 3 164 3 0 0 22 41 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - u - - - ML 165 164 3 167 3 1 1 22 41 -8.246 -0.017 -6.900 0.183 -0.898 -0.244 0.569 D 166 164 3 167 3 0 0 21 40 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 37 - G - - - ML 168 167 3 170 3 1 1 21 40 -8.246 -0.017 -6.900 -0.696 -0.588 1.126 -0.902 D 169 167 3 170 3 0 0 20 39 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 38 - U - - - ML 171 170 3 173 3 1 1 20 38 -8.246 -0.017 -6.900 -2.020 -1.925 -2.775 1.742 D 172 170 3 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 39 - G - - - ML 174 173 3 176 3 1 1 19 37 -8.246 -0.017 -6.900 -2.169 -3.470 1.828 -2.856 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 40 - C - - - ML 177 176 3 179 3 1 1 17 36 -8.246 -0.017 -6.900 -2.432 1.768 -3.262 -1.710 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 41 - U - - - ML 180 179 3 182 3 1 1 16 35 -8.246 -0.017 -6.900 -2.020 -1.925 -2.775 1.742 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 42 - G - - - ML 183 182 3 185 3 1 1 15 33 -8.246 -0.017 -6.900 -2.169 -3.470 1.828 -2.856 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 43 - C - - - ML 186 185 3 188 3 1 1 13 31 -8.246 -0.017 -6.900 -2.432 1.768 -3.262 -1.710 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 44 - g - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.371 -0.281 0.359 0.166 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB9Cs1H1 ACC RF01861 DESC Trypanosomatid snoRNA TB9Cs1H1 LENG 63 MAXL 144 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Apr 11 10:57:23 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 4 EFFN 3.152344 CKSUM 3921733990 STATS LOCAL MSV -8.2415 0.72052 STATS LOCAL VITERBI -8.7537 0.72052 STATS LOCAL FORWARD -3.5843 0.72052 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.37515 1.38240 1.20770 1.62283 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 0.00000 * 1 0.52341 1.68920 2.41993 2.01062 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 2.81844 3.59494 0.12371 3.53359 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 3.57147 0.16538 3.38674 2.40244 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 1.11551 2.67878 0.64460 2.54170 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 3.56846 0.16560 3.38517 2.40188 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 0.22194 3.22287 2.15719 3.13383 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.81585 3.59144 0.12415 3.52882 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 0.94877 1.51720 2.19554 1.26528 8 a - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 0.87664 1.13567 2.35732 1.78415 9 a - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 10 1.27782 2.04601 1.52572 0.98178 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 11 0.10592 3.59452 3.28530 3.33538 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 12 1.79956 2.20203 1.08093 0.95511 12 u - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 13 3.05601 3.97767 0.09934 3.54864 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 0.10592 3.59452 3.28530 3.33538 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 0.10592 3.59452 3.28530 3.33538 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 0.88140 3.07552 0.72908 2.85981 16 g - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 3.57013 0.16548 3.38604 2.40219 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 2.81442 0.55679 2.57979 1.23366 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 0.73651 2.70988 0.97308 2.56713 19 a - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 2.27643 3.07058 0.22635 2.92772 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 2.20785 1.46700 2.74384 0.51899 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 1.79956 2.20203 1.08093 0.95511 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 1.25256 1.20752 1.51538 1.63186 23 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 24 0.97259 2.11863 2.26874 0.92065 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 1.80184 2.21375 1.03720 0.99083 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 3.05601 3.97767 0.09934 3.54864 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 3.27444 0.13235 3.84350 2.73780 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 1.28654 2.15790 1.06306 1.33631 28 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 1.28578 2.04621 1.52708 0.97505 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.42856 1.10134 4.12713 0.93926 0.49580 1.09861 0.40547 30 0.15140 3.26064 2.98262 2.96670 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 1.40913 0.66037 2.58533 1.81024 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 2.12150 0.94823 2.69038 0.85598 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 1.26070 2.04405 1.55012 0.98131 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 1.95044 1.80218 0.56015 2.10597 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 2.94832 2.85603 3.47719 0.15178 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 3.05601 3.97767 0.09934 3.54864 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 3.27444 0.13235 3.84350 2.73780 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 2.94832 2.85603 3.47719 0.15178 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 3.05601 3.97767 0.09934 3.54864 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 3.27444 0.13235 3.84350 2.73780 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 1.68229 1.57781 1.10922 1.28082 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 3.15489 0.39225 2.88701 1.48688 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 2.79633 1.10142 2.51693 0.64272 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 1.38021 2.74728 0.49727 2.57464 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 2.68708 3.55866 0.14154 3.34047 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 3.07863 1.96073 2.87179 0.27889 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 3.05601 3.97767 0.09934 3.54864 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 3.27444 0.13235 3.84350 2.73780 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 3.27444 0.13235 3.84350 2.73780 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 50 3.05601 3.97767 0.09934 3.54864 53 G - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 51 0.10592 3.59452 3.28530 3.33538 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 52 0.90895 1.09764 2.36311 1.77627 55 a - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 53 0.48590 2.68427 1.51832 2.32784 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 54 3.71133 0.14853 3.43447 2.50910 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 55 3.35509 2.49285 3.03120 0.18133 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 56 2.68345 3.55311 0.14226 3.33414 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 57 2.78171 0.72860 2.48974 0.98738 60 c - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 58 2.68732 3.55903 0.14149 3.34089 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 59 3.74202 0.14661 3.44893 2.51476 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 60 0.85299 2.63067 0.92883 2.23666 63 a - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 61 0.10592 3.59452 3.28530 3.33538 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 62 3.05601 3.97767 0.09934 3.54864 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 63 0.10592 3.59452 3.28530 3.33538 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.01653 4.11087 * 1.46634 0.26236 0.00000 * //