# STOCKHOLM 1.0
#=GF ID mycoplasma_FSE
#=GF AC RF01842
#=GF DE mycoplasma ribosomal frameshift element
#=GF AU Boursnell C; 0000-0002-3494-4451
#=GF GA 88.0
#=GF NC 46.8
#=GF TC 95.2
#=GF SE Published; PMID:7476162
#=GF SS Published; PMID:7476162
#=GF TP Cis-reg; frameshift_element;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 40.38 -Z 2958934 CM SEQDB
#=GF DR SO; 0001427; cis_regulatory_frameshift_element;
#=GF DR URL; http://recode.ucc.ie/recode/r200011;
#=GF DR GO; 0006452; translational frameshifting;
#=GF RN [1]
#=GF RM 7476162
#=GF RT Characterization of IS1221 from Mycoplasma hyorhinis: expression of its
#=GF RT putative transposase in Escherichia coli incorporates a ribosomal
#=GF RT frameshift mechanism.
#=GF RA Zheng J, McIntosh MA
#=GF RL Mol Microbiol. 1995;16:669-685.
#=GF WK Mycoplasma
#=GF SQ 3

U01217.1/534-620 AAAUGAAGUUCUAAA-AAAGUGAAAAGCCUUGGUAGAGAUCUUUGACUCAAGUCAACCAAGGCAAGAGAAAAUAAAAAAAAUUUAUAA
L33926.1/533-620 AAAUGAAGUACUAAAAAAAGUGAGAAGCCUUGGUAGAGAUCUUUGACUCAAAUCAACCAAGGCAAGAAAAAAUAAAAAAAAUUUAUAA
X17372.1/577-663 AAUCGAAGCACUAAA-AAAGUGAAAAGCCUUGGUAGAGAUCUUUGACUCAAAUCAACCAAGGCAAGAAAAAAUAAAAAAAAUUUAUAA
#=GC SS_cons     :::::::::::::::.::::::::::<<<<<<<<<<<_______________>>>>>>>>>>>:::::::::::::::::::::::::
#=GC RF          AAauGAAGuaCUAAA.AAAGUGAaAAGCCuuGGuaGaGAUCUUUGACUCAAauCaaCCaaGGCAAGAaAAAAUAAAAAAAAUUUAUAA
//
