INFERNAL1/a [1.1.5 | Sep 2023] NAME sR6 ACC RF01829 DESC sR6 snoRNA STATES 168 NODES 51 CLEN 53 W 69 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 06:44:38 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01829/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.886719 CKSUM 2391687207 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 89.20 NC 39.60 EFP7GF -4.5174 0.72863 ECMLC 0.48508 -11.10102 2.15165 1600000 743131 0.001615 ECMGC 0.36794 -17.68032 -2.07590 1600000 124611 0.003210 ECMLI 0.47971 -9.00598 3.77377 1600000 551609 0.002175 ECMGI 0.40351 -12.84824 0.55997 1600000 89478 0.004470 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 69 90 -6.848 -8.094 -0.082 -4.547 IL 1 1 2 1 4 1 19 71 91 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 71 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 53 - A - - MR 3 2 3 5 3 1 20 69 90 -8.339 -0.019 -6.657 1.712 -2.339 -1.974 -1.878 D 4 2 3 5 3 0 16 68 88 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 19 70 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 52 - A - - MR 6 5 3 8 3 1 19 68 89 -8.339 -0.019 -6.657 1.712 -2.339 -1.974 -1.878 D 7 5 3 8 3 0 15 67 87 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 19 69 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 51 - A - - MR 9 8 3 11 3 1 18 67 88 -8.339 -0.019 -6.657 1.712 -2.339 -1.974 -1.878 D 10 8 3 11 3 0 15 66 86 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 18 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 50 - U - - MR 12 11 3 14 3 1 17 66 87 -8.339 -0.019 -6.657 -1.456 -1.457 -2.188 1.610 D 13 11 3 14 3 0 14 65 85 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 17 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 49 - C - - MR 15 14 3 17 3 1 16 65 86 -8.339 -0.019 -6.657 -1.702 1.613 -2.524 -1.123 D 16 14 3 17 3 0 14 64 84 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 16 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 48 - A - - MR 18 17 3 20 3 1 15 64 85 -8.339 -0.019 -6.657 1.712 -2.339 -1.974 -1.878 D 19 17 3 20 3 0 13 63 83 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 15 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 47 - G - - MR 21 20 3 23 2 1 14 63 84 -8.337 -0.004 -1.546 -2.761 1.716 -2.147 D 22 20 3 23 2 0 13 63 83 -4.432 -0.068 IR 23 23 3 23 2 1 14 64 84 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 8 ] - - - - - - B 24 23 3 25 60 0 13 62 83 [ BEGL 9 ] - - - - - - S 25 24 1 26 4 0 0 25 44 -0.045 -6.825 -6.232 -6.872 [ MATP 10 ] 1 11 G C - - MP 26 25 1 30 6 2 2 25 44 -9.101 -9.040 -0.021 -7.817 -8.096 -8.491 -4.714 -3.081 -4.810 0.219 -5.193 -4.683 -0.565 -5.051 -4.309 3.631 -4.648 -0.778 -0.951 -4.449 -2.600 -3.687 ML 27 25 1 30 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 1 30 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 1 30 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 2 10 G C - - MP 32 31 6 36 4 2 2 23 42 -6.930 -7.137 -0.054 -5.551 -4.714 -3.081 -4.810 0.219 -5.193 -4.683 -0.565 -5.051 -4.309 3.631 -4.648 -0.778 -0.951 -4.449 -2.600 -3.687 ML 33 31 6 36 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 35 31 6 36 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 36 36 5 36 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 37 37 6 37 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 3 - A - - - ML 38 37 6 40 3 1 1 20 39 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 39 37 6 40 3 0 0 19 38 -6.174 -1.687 -0.566 IL 40 40 3 40 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 4 - U - - - ML 41 40 3 43 3 1 1 19 37 -7.948 -0.021 -6.602 -1.456 -1.457 -2.188 1.610 D 42 40 3 43 3 0 0 18 37 -6.174 -1.687 -0.566 IL 43 43 3 43 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 5 - G - - - ML 44 43 3 46 3 1 1 18 36 -7.948 -0.021 -6.602 -1.546 -2.761 1.716 -2.147 D 45 43 3 46 3 0 0 17 36 -6.174 -1.687 -0.566 IL 46 46 3 46 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 6 - A - - - ML 47 46 3 49 3 1 1 16 35 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 48 46 3 49 3 0 0 16 34 -6.174 -1.687 -0.566 IL 49 49 3 49 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 7 - U - - - ML 50 49 3 52 3 1 1 15 33 -7.948 -0.021 -6.602 -1.456 -1.457 -2.188 1.610 D 51 49 3 52 3 0 0 15 33 -6.174 -1.687 -0.566 IL 52 52 3 52 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 8 - G - - - ML 53 52 3 55 3 1 1 13 31 -7.948 -0.021 -6.602 -1.546 -2.761 1.716 -2.147 D 54 52 3 55 3 0 0 13 32 -6.174 -1.687 -0.566 IL 55 55 3 55 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 9 - A - - - ML 56 55 3 58 2 1 1 1 1 * 0.000 1.712 -2.339 -1.974 -1.878 D 57 55 3 58 2 0 0 0 0 * 0.000 IL 58 58 3 58 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 19 ] - - - - - - E 59 58 3 -1 0 0 0 0 0 [ BEGR 20 ] - - - - - - S 60 24 1 61 3 0 4 51 71 -7.948 -0.021 -6.602 IL 61 61 2 61 3 1 3 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 12 - A - - - ML 62 61 2 64 3 1 4 51 71 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 63 61 2 64 3 0 0 49 69 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 3 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 13 - A - - - ML 65 64 3 67 3 1 4 50 69 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 66 64 3 67 3 0 0 48 68 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 14 - A - - - ML 68 67 3 70 3 1 3 49 68 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 69 67 3 70 3 0 0 47 67 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 2 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 15 - U - - - ML 71 70 3 73 3 1 3 48 67 -7.948 -0.021 -6.602 -1.456 -1.457 -2.188 1.610 D 72 70 3 73 3 0 0 46 66 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 2 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 16 - A - - - ML 74 73 3 76 3 1 2 47 66 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 75 73 3 76 3 0 0 45 65 -6.174 -1.687 -0.566 IL 76 76 3 76 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 17 - G - - - ML 77 76 3 79 3 1 2 46 65 -7.948 -0.021 -6.602 -1.546 -2.761 1.716 -2.147 D 78 76 3 79 3 0 0 44 64 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 18 - A - - - ML 80 79 3 82 3 1 2 44 64 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 81 79 3 82 3 0 0 43 63 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 19 - C - - - ML 83 82 3 85 3 1 2 43 63 -7.948 -0.021 -6.602 -1.702 1.613 -2.524 -1.123 D 84 82 3 85 3 0 0 42 62 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 20 - U - - - ML 86 85 3 88 3 1 1 42 62 -7.948 -0.021 -6.602 -1.456 -1.457 -2.188 1.610 D 87 85 3 88 3 0 0 41 61 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 21 - G - - - ML 89 88 3 91 3 1 1 41 61 -7.948 -0.021 -6.602 -1.546 -2.761 1.716 -2.147 D 90 88 3 91 3 0 0 40 60 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 22 - A - - - ML 92 91 3 94 3 1 1 40 60 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 93 91 3 94 3 0 0 39 58 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 23 - A - - - ML 95 94 3 97 5 1 1 39 59 -7.079 -0.039 -6.895 -7.107 -7.998 1.712 -2.339 -1.974 -1.878 D 96 94 3 97 5 0 0 38 57 -4.959 -0.803 -4.221 -2.596 -2.508 IL 97 97 3 97 5 1 1 40 59 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 46 A U - - MP 98 97 3 102 6 2 2 38 58 -9.101 -9.040 -0.021 -7.817 -8.096 -8.491 -3.768 -2.805 -3.788 3.316 -4.115 -5.175 0.183 -3.832 -3.681 1.104 -4.227 -0.285 -0.234 -4.367 -1.757 -2.623 ML 99 97 3 102 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 3 102 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 3 102 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 45 G C - - MP 104 103 6 108 4 2 2 36 56 -6.930 -7.137 -0.054 -5.551 -4.714 -3.081 -4.810 0.219 -5.193 -4.683 -0.565 -5.051 -4.309 3.631 -4.648 -0.778 -0.951 -4.449 -2.600 -3.687 ML 105 103 6 108 4 1 1 37 56 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 4 1 1 36 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 107 103 6 108 4 0 0 35 55 -4.568 -4.250 -2.265 -0.520 IL 108 108 5 108 4 1 1 38 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 109 109 6 109 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 26 - A - - - ML 110 109 6 112 3 1 1 34 53 -8.339 -0.019 -6.657 1.712 -2.339 -1.974 -1.878 D 111 109 6 112 3 0 0 33 52 -5.620 -0.734 -1.403 IL 112 112 3 112 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 44 - A - - MR 113 112 3 115 5 1 1 33 52 -7.079 -0.039 -6.895 -7.107 -7.998 1.712 -2.339 -1.974 -1.878 D 114 112 3 115 5 0 0 31 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 115 115 3 115 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 27 43 U A - - MP 116 115 3 120 6 2 2 32 51 -9.101 -9.040 -0.021 -7.817 -8.096 -8.491 -4.161 -3.985 -4.002 -0.282 -2.950 -4.569 1.377 -3.644 -4.007 -0.024 -4.382 -1.885 3.314 -4.313 -0.627 -2.835 ML 117 115 3 120 6 1 1 30 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 3 120 6 1 1 30 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 3 120 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 31 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 28 42 G C - - MP 122 121 6 126 6 2 2 30 49 -9.101 -9.040 -0.021 -7.817 -8.096 -8.491 -4.714 -3.081 -4.810 0.219 -5.193 -4.683 -0.565 -5.051 -4.309 3.631 -4.648 -0.778 -0.951 -4.449 -2.600 -3.687 ML 123 121 6 126 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 29 41 A U - - MP 128 127 6 132 4 2 2 28 47 -6.930 -7.137 -0.054 -5.551 -3.768 -2.805 -3.788 3.316 -4.115 -5.175 0.183 -3.832 -3.681 1.104 -4.227 -0.285 -0.234 -4.367 -1.757 -2.623 ML 129 127 6 132 4 1 1 28 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 131 127 6 132 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 132 132 5 132 4 1 1 30 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 133 133 6 133 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - A - - - ML 134 133 6 136 5 1 1 25 44 -7.079 -0.039 -6.895 -7.107 -7.998 1.712 -2.339 -1.974 -1.878 D 135 133 6 136 5 0 0 24 43 -4.959 -0.803 -4.221 -2.596 -2.508 IL 136 136 3 136 5 1 1 26 45 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 31 40 G C - - MP 137 136 3 141 4 2 2 24 43 -6.930 -7.137 -0.054 -5.551 -4.714 -3.081 -4.810 0.219 -5.193 -4.683 -0.565 -5.051 -4.309 3.631 -4.648 -0.778 -0.951 -4.449 -2.600 -3.687 ML 138 136 3 141 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 139 136 3 141 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 140 136 3 141 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 141 141 5 141 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 142 142 6 142 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - A - - - ML 143 142 6 145 3 1 1 21 40 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 144 142 6 145 3 0 0 20 39 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - A - - - ML 146 145 3 148 3 1 1 20 39 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 147 145 3 148 3 0 0 19 38 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - A - - - ML 149 148 3 151 3 1 1 19 37 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 150 148 3 151 3 0 0 18 37 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - U - - - ML 152 151 3 154 3 1 1 18 36 -7.948 -0.021 -6.602 -1.456 -1.457 -2.188 1.610 D 153 151 3 154 3 0 0 17 36 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - G - - - ML 155 154 3 157 3 1 1 16 35 -7.948 -0.021 -6.602 -1.546 -2.761 1.716 -2.147 D 156 154 3 157 3 0 0 16 34 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - C - - - ML 158 157 3 160 3 1 1 15 33 -7.948 -0.021 -6.602 -1.702 1.613 -2.524 -1.123 D 159 157 3 160 3 0 0 15 33 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - A - - - ML 161 160 3 163 3 1 1 13 31 -7.948 -0.021 -6.602 1.712 -2.339 -1.974 -1.878 D 162 160 3 163 3 0 0 13 32 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - C - - - ML 164 163 3 166 2 1 1 1 1 * 0.000 -1.702 1.613 -2.524 -1.123 D 165 163 3 166 2 0 0 0 0 * 0.000 IL 166 166 3 166 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 167 166 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR6 ACC RF01829 DESC sR6 snoRNA LENG 53 MAXL 137 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 06:44:38 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01829/CM NSEQ 2 EFFN 1.472656 CKSUM 2391687207 STATS LOCAL MSV -7.5611 0.72863 STATS LOCAL VITERBI -8.6917 0.72863 STATS LOCAL FORWARD -2.9357 0.72863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.97857 1.64682 1.46009 1.61307 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.29699 2.75043 0.26323 2.70346 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.29535 2.74894 0.26376 2.70124 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.25961 2.77414 2.54474 2.43328 3 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.18504 2.22440 2.67986 0.34133 4 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.20796 3.00737 0.26795 2.58085 5 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.25961 2.77414 2.54474 2.43328 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.18504 2.22440 2.67986 0.34133 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.20796 3.00737 0.26795 2.58085 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.25961 2.77414 2.54474 2.43328 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.91075 0.30964 2.57248 1.99870 10 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.90270 0.31086 2.56942 1.99711 11 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.25961 2.77414 2.54474 2.43328 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.25961 2.77414 2.54474 2.43328 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.25961 2.77414 2.54474 2.43328 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.18504 2.22440 2.67986 0.34133 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.25961 2.77414 2.54474 2.43328 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.20796 3.00737 0.26795 2.58085 17 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.25961 2.77414 2.54474 2.43328 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.28940 0.35979 2.84722 1.94599 19 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.18504 2.22440 2.67986 0.34133 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.20796 3.00737 0.26795 2.58085 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.25961 2.77414 2.54474 2.43328 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.25961 2.77414 2.54474 2.43328 23 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.58763 2.25944 1.46817 2.21090 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.29273 2.74657 0.26461 2.69771 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.25961 2.77414 2.54474 2.43328 26 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.50358 1.57550 2.19369 0.51116 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.29178 2.74571 0.26492 2.69643 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.58754 2.25962 1.46816 2.21121 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.25961 2.77414 2.54474 2.43328 30 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.29124 2.74523 0.26510 2.69570 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.25961 2.77414 2.54474 2.43328 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.25961 2.77414 2.54474 2.43328 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.25961 2.77414 2.54474 2.43328 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.18504 2.22440 2.67986 0.34133 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.20796 3.00737 0.26795 2.58085 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.28940 0.35979 2.84722 1.94599 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.25961 2.77414 2.54474 2.43328 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.28940 0.35979 2.84722 1.94599 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.89823 0.31154 2.56771 1.99623 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.44525 1.71178 2.07688 0.49852 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.92312 0.30780 2.57716 2.00112 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.58172 2.37117 1.41164 2.26384 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.25961 2.77414 2.54474 2.43328 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.91109 0.30959 2.57261 1.99877 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.43587 1.71157 2.07429 0.50046 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.20796 3.00737 0.26795 2.58085 47 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.25961 2.77414 2.54474 2.43328 48 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.28940 0.35979 2.84722 1.94599 49 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.18504 2.22440 2.67986 0.34133 50 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.25961 2.77414 2.54474 2.43328 51 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.25961 2.77414 2.54474 2.43328 52 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.25961 2.77414 2.54474 2.43328 53 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //