{"rfam": {"acc": "RF01807", "id": "GIR1", "description": "GIR1 branching ribozyme", "comment": "GIR1 branching ribozyme also namend lariat-capping (LC) ribozyme is a natural ribozyme with similarity to group I introns, the LC ribozyme catalyzes cleavage by a 2\u00e2\u20ac\u00b2,5\u00e2\u20ac\u00b2 branching reaction, leaving the 3\u00e2\u20ac\u00b2 product with a 3-nt lariat cap that functionally substitutes for a conventional mRNA cap in the downstream pre-mRNA encoding a homing endonuclease. The structure of GIR1 branching ribozyme has been reported in PDB: 4P8Z [4].", "curation": {"author": "Gardner PP, Moore B, Ontiveros-Palacios N", "seed_source": "Predicted; Infernal;", "num_seed": 13, "num_full": 0, "num_species": 12, "type": "Gene; ribozyme;", "structure_source": "Published; PMID:16141078"}, "cm": {"build_command": "cmbuild -F CM SEED", "calibrate_command": "cmcalibrate --mpi CM", "search_command": "cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB", "cutoffs": {"gathering": 100.0, "trusted": 117.2, "noise": 61.1}}, "release": {"date": "2026-01-16", "number": "15.1"}, "clan": {"acc": null, "id": null}}}