INFERNAL1/a [1.1.5 | Sep 2023] NAME g2 ACC RF01798 DESC G2 STATES 205 NODES 48 CLEN 67 W 82 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 20:51:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01798/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.300781 CKSUM 4215728969 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 102.40 NC 47.30 EFP7GF -6.6037 0.72250 ECMLC 0.55398 -7.47572 3.13859 1600000 429436 0.002794 ECMGC 0.41869 -17.17430 -2.41044 1600000 193481 0.002067 ECMLI 0.53660 -5.73445 4.10142 1600000 235162 0.005103 ECMGI 0.44736 -11.85268 0.68989 1600000 109366 0.003657 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 101 -6.664 -6.871 -0.065 -5.285 IL 1 1 2 1 4 1 11 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 10 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 10 82 101 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 4 2 3 5 3 0 5 81 100 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 10 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 9 81 100 -8.112 -0.022 -6.430 -1.021 -1.103 -1.725 1.454 D 7 5 3 8 3 0 4 80 99 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 8 82 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 67 - C - - MR 9 8 3 11 3 1 9 80 99 -8.112 -0.022 -6.430 -1.132 1.408 -1.926 -0.673 D 10 8 3 11 3 0 3 78 97 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 7 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 66 - U - - MR 12 11 3 14 3 1 8 79 98 -8.112 -0.022 -6.430 -1.021 -1.103 -1.725 1.454 D 13 11 3 14 3 0 2 77 96 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 7 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 65 - C - - MR 15 14 3 17 3 1 7 78 97 -8.112 -0.022 -6.430 -1.132 1.408 -1.926 -0.673 D 16 14 3 17 3 0 1 76 95 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 6 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 64 - C - - MR 18 17 3 20 3 1 7 77 96 -8.112 -0.022 -6.430 -1.132 1.408 -1.926 -0.673 D 19 17 3 20 3 0 1 75 94 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 5 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 63 - C - - MR 21 20 3 23 5 1 7 76 95 -6.868 -0.046 -6.683 -6.896 -7.787 -1.132 1.408 -1.926 -0.673 D 22 20 3 23 5 0 0 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 23 23 3 23 5 1 4 76 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 62 u g - - MP 24 23 3 28 6 2 8 75 94 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.586 -3.481 -3.401 0.132 -2.331 -3.912 1.939 -3.049 -3.437 0.419 -3.783 -1.497 1.170 -3.716 2.593 -2.335 ML 25 23 3 28 6 1 2 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 3 28 6 1 2 73 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 3 28 6 0 0 71 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 3 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 3 74 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 61 C G - - MP 30 29 6 34 6 2 8 73 92 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.041 -3.894 -3.812 -0.180 -2.654 -4.288 3.355 -3.411 -3.849 0.151 -4.159 -1.836 0.905 -4.140 -0.353 -2.708 ML 31 29 6 34 6 1 2 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 2 71 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 69 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 3 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 3 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 60 a u - - MP 36 35 6 40 6 2 7 71 90 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.400 -2.539 -3.441 2.995 -3.588 -4.624 0.690 -3.504 -3.354 1.507 -3.881 -0.087 0.269 -3.875 -1.255 -2.303 ML 37 35 6 40 6 1 2 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 2 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 3 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 3 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 59 G C - - MP 42 41 6 46 6 2 7 69 88 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 43 41 6 46 6 1 2 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 2 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 2 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 2 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 58 C G - - MP 48 47 6 52 6 2 6 67 86 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.041 -3.894 -3.812 -0.180 -2.654 -4.288 3.355 -3.411 -3.849 0.151 -4.159 -1.836 0.905 -4.140 -0.353 -2.708 ML 49 47 6 52 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 2 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 2 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 57 G C - - MP 54 53 6 58 6 2 6 65 84 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 55 53 6 58 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 2 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 2 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 56 G C - - MP 60 59 6 64 6 2 6 63 82 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 61 59 6 64 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 55 G C - - MP 66 65 6 70 6 2 5 61 80 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 67 65 6 70 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 54 G C - - MP 72 71 6 76 6 2 5 59 78 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 73 71 6 76 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 53 G C - - MP 78 77 6 82 6 2 4 57 76 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 79 77 6 82 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 52 g u - - MP 84 83 6 88 4 2 2 55 74 -6.606 -7.851 -0.097 -4.305 -3.303 -2.211 -3.439 1.304 -3.897 -4.643 0.431 -3.511 -3.198 1.777 -3.705 2.651 0.069 -3.903 -1.507 -2.216 ML 85 83 6 88 4 1 1 54 73 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 54 73 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 52 71 -12.737 -14.007 -2.036 -0.404 IL 88 88 5 88 4 1 1 54 73 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 51 - A - - MR 90 89 6 92 5 1 1 53 72 -6.868 -0.046 -6.683 -6.896 -7.787 1.578 -1.854 -1.538 -1.350 D 91 89 6 92 5 0 0 51 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 92 92 3 92 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 50 C G - - MP 93 92 3 97 6 2 2 52 71 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.041 -3.894 -3.812 -0.180 -2.654 -4.288 3.355 -3.411 -3.849 0.151 -4.159 -1.836 0.905 -4.140 -0.353 -2.708 ML 94 92 3 97 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 3 97 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 3 97 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 49 U A - - MP 99 98 6 103 6 2 2 50 69 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.693 -3.493 -3.582 0.171 -2.640 -4.190 1.674 -3.297 -3.594 0.518 -3.990 -1.405 3.020 -3.859 -0.328 -2.462 ML 100 98 6 103 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 48 U A - - MP 105 104 6 109 6 2 2 48 67 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.693 -3.493 -3.582 0.171 -2.640 -4.190 1.674 -3.297 -3.594 0.518 -3.990 -1.405 3.020 -3.859 -0.328 -2.462 ML 106 104 6 109 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 47 a u - - MP 111 110 6 115 6 2 2 46 65 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.400 -2.539 -3.441 2.995 -3.588 -4.624 0.690 -3.504 -3.354 1.507 -3.881 -0.087 0.269 -3.875 -1.255 -2.303 ML 112 110 6 115 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 46 U A - - MP 117 116 6 121 6 2 2 44 63 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.693 -3.493 -3.582 0.171 -2.640 -4.190 1.674 -3.297 -3.594 0.518 -3.990 -1.405 3.020 -3.859 -0.328 -2.462 ML 118 116 6 121 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 45 C G - - MP 123 122 6 127 4 2 2 42 61 -6.606 -7.851 -0.097 -4.305 -4.041 -3.894 -3.812 -0.180 -2.654 -4.288 3.355 -3.411 -3.849 0.151 -4.159 -1.836 0.905 -4.140 -0.353 -2.708 ML 124 122 6 127 4 1 1 41 60 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 41 60 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 39 58 -12.737 -14.007 -2.036 -0.404 IL 127 127 5 127 4 1 1 41 60 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 44 - A - - MR 129 128 6 131 3 1 1 40 59 -8.112 -0.022 -6.430 1.578 -1.854 -1.538 -1.350 D 130 128 6 131 3 0 0 38 57 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 40 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 43 - G - - MR 132 131 3 134 3 1 1 39 58 -8.112 -0.022 -6.430 -1.025 -2.148 1.555 -1.533 D 133 131 3 134 3 0 0 37 56 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 39 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 42 - C - - MR 135 134 3 137 3 1 1 38 57 -8.112 -0.022 -6.430 -1.132 1.408 -1.926 -0.673 D 136 134 3 137 3 0 0 36 55 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 38 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 41 - U - - MR 138 137 3 140 3 1 1 37 56 -8.112 -0.022 -6.430 -1.021 -1.103 -1.725 1.454 D 139 137 3 140 3 0 0 35 54 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 37 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 40 - C - - MR 141 140 3 143 3 1 1 36 55 -8.112 -0.022 -6.430 -1.132 1.408 -1.926 -0.673 D 142 140 3 143 3 0 0 34 53 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 36 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 39 - C - - MR 144 143 3 146 5 1 1 35 54 -6.868 -0.046 -6.683 -6.896 -7.787 -1.132 1.408 -1.926 -0.673 D 145 143 3 146 5 0 0 33 52 -5.352 -0.707 -2.978 -4.409 -2.404 IR 146 146 3 146 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 20 38 G C - - MP 147 146 3 151 6 2 2 34 53 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 148 146 3 151 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 37 a u - - MP 153 152 6 157 6 2 2 32 51 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.400 -2.539 -3.441 2.995 -3.588 -4.624 0.690 -3.504 -3.354 1.507 -3.881 -0.087 0.269 -3.875 -1.255 -2.303 ML 154 152 6 157 6 1 1 30 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 31 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 36 U A - - MP 159 158 6 163 6 2 2 30 49 -9.006 -8.945 -0.023 -7.721 -8.001 -8.396 -3.693 -3.493 -3.582 0.171 -2.640 -4.190 1.674 -3.297 -3.594 0.518 -3.990 -1.405 3.020 -3.859 -0.328 -2.462 ML 160 158 6 163 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 29 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 23 35 G C - - MP 165 164 6 169 4 2 2 28 47 -6.664 -6.871 -0.065 -5.285 -4.237 -2.857 -4.303 0.525 -4.521 -4.485 -0.006 -4.499 -3.978 3.489 -4.355 -0.543 -0.408 -4.132 -2.019 -3.188 ML 166 164 6 169 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 30 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 24 - C - - - ML 171 170 6 173 3 1 1 25 44 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 172 170 6 173 3 0 0 24 43 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 25 - A - - - ML 174 173 3 176 3 1 1 24 43 -7.703 -0.025 -6.357 1.578 -1.854 -1.538 -1.350 D 175 173 3 176 3 0 0 23 42 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 26 - U - - - ML 177 176 3 179 3 1 1 23 41 -7.703 -0.025 -6.357 -1.021 -1.103 -1.725 1.454 D 178 176 3 179 3 0 0 22 40 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 27 - C - - - ML 180 179 3 182 3 1 1 21 40 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 181 179 3 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 28 - C - - - ML 183 182 3 185 3 1 1 20 39 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 29 - C - - - ML 186 185 3 188 3 1 1 19 38 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 30 - C - - - ML 189 188 3 191 3 1 1 18 36 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 31 - A - - - ML 192 191 3 194 3 1 1 16 35 -7.703 -0.025 -6.357 1.578 -1.854 -1.538 -1.350 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 32 - C - - - ML 195 194 3 197 3 1 1 15 33 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 33 - C - - - ML 198 197 3 200 3 1 1 13 32 -7.703 -0.025 -6.357 -1.132 1.408 -1.926 -0.673 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 34 - C - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -1.132 1.408 -1.926 -0.673 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 47 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME g2 ACC RF01798 DESC G2 LENG 67 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 20:51:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01798/CM NSEQ 2 EFFN 1.667969 CKSUM 4215728969 STATS LOCAL MSV -7.6722 0.72250 STATS LOCAL VITERBI -9.4296 0.72250 STATS LOCAL FORWARD -3.3203 0.72250 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.67508 1.03754 1.42440 1.52450 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.42180 0.31181 2.98629 2.05071 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.28586 2.30660 2.78716 0.30501 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.61384 1.41742 2.36077 0.52753 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.84738 0.34410 2.57537 1.85138 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.51792 2.37265 1.54785 2.31969 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.36239 2.86946 0.23664 2.81675 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.84883 0.34387 2.57596 1.85160 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.36198 2.86907 0.23676 2.81617 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.36172 2.86881 0.23684 2.81579 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.36147 2.86856 0.23691 2.81544 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.36125 2.86835 0.23698 2.81512 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.36106 2.86817 0.23703 2.81486 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 1.77464 2.53664 0.41036 2.43145 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.82082 0.34841 2.56435 1.84727 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.59735 1.64383 2.30840 0.45749 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.60210 1.64382 2.31011 0.45667 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.51845 2.37145 1.54781 2.31773 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.60525 1.64381 2.31124 0.45612 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.84548 0.34440 2.57458 1.85109 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.35749 2.86467 0.23810 2.80977 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.51826 2.37188 1.54783 2.31843 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.60728 1.64381 2.31197 0.45577 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.36197 2.86906 0.23676 2.81616 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.42180 0.31181 2.98629 2.05071 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.22854 2.88675 2.64606 2.55597 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.28586 2.30660 2.78716 0.30501 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.42180 0.31181 2.98629 2.05071 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.42180 0.31181 2.98629 2.05071 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.42180 0.31181 2.98629 2.05071 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.42180 0.31181 2.98629 2.05071 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.22854 2.88675 2.64606 2.55597 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.42180 0.31181 2.98629 2.05071 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.42180 0.31181 2.98629 2.05071 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.42180 0.31181 2.98629 2.05071 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 3.03497 0.27672 2.69976 2.06804 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.51861 2.49006 1.48040 2.36236 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.55359 1.80300 2.18912 0.43792 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 3.04101 0.27593 2.70214 2.06921 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.42180 0.31181 2.98629 2.05071 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.42180 0.31181 2.98629 2.05071 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.28586 2.30660 2.78716 0.30501 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.42180 0.31181 2.98629 2.05071 42 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.32911 3.14990 0.23049 2.72395 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.22854 2.88675 2.64606 2.55597 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.12415 2.74082 0.29848 2.60369 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.51915 2.48849 1.48044 2.36017 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.54901 1.80276 2.18772 0.43877 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.51907 2.48874 1.48043 2.36052 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.51901 2.48889 1.48043 2.36073 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.12501 2.74181 0.29812 2.60500 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.22854 2.88675 2.64606 2.55597 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.64908 1.61715 2.34263 0.45453 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 3.02998 0.27737 2.69778 2.06707 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 3.03053 0.27730 2.69800 2.06718 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.03121 0.27721 2.69827 2.06731 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 3.03203 0.27710 2.69860 2.06747 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 3.03304 0.27697 2.69899 2.06767 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.12562 2.74251 0.29787 2.60593 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 3.03575 0.27661 2.70007 2.06819 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.55302 1.80297 2.18894 0.43802 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.12726 2.74442 0.29719 2.60846 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 1.91305 2.53601 0.38580 2.37212 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.42180 0.31181 2.98629 2.05071 63 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.42180 0.31181 2.98629 2.05071 64 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 2.42180 0.31181 2.98629 2.05071 65 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.28586 2.30660 2.78716 0.30501 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 2.42180 0.31181 2.98629 2.05071 67 C - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //