INFERNAL1/a [1.1.4 | Dec 2020] NAME F6 ACC RF01791 DESC F6 TB sRNA STATES 178 NODES 40 CLEN 58 W 72 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:42:34 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 4.402344 CKSUM 3443524201 NULL 0.000 0.000 0.000 0.000 GA 46.00 TC 47.30 NC 45.10 EFP7GF -13.7419 0.71930 ECMLC 0.56990 -5.94983 3.54353 1600000 268435 0.004470 ECMGC 0.41041 -15.81001 -0.52744 1600000 211833 0.001888 ECMLI 0.55198 -4.90347 4.29595 1600000 192527 0.006233 ECMGI 0.42027 -12.31118 1.62781 1600000 140029 0.002857 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 72 91 -7.715 -7.922 -0.031 -6.337 IL 1 1 2 1 4 1 5 77 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 76 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 6 72 91 -9.041 -0.012 -7.359 -0.077 0.672 -1.126 0.000 D 4 2 3 5 3 0 1 71 90 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 4 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 59 - a - - MR 6 5 3 8 5 1 6 71 90 -7.743 -0.025 -7.559 -7.771 -8.663 0.320 0.028 -0.691 0.154 D 7 5 3 8 5 0 1 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 3 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 58 g c - - MP 9 8 3 13 6 2 6 70 89 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -1.715 -1.232 -2.064 0.971 -2.072 -0.799 1.213 -2.283 -1.144 1.603 -1.471 0.914 1.003 -2.063 0.204 -0.728 ML 10 8 3 13 6 1 2 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 2 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 2 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 2 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 57 g c - - MP 15 14 6 19 6 2 6 68 87 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -3.302 -0.724 -3.292 1.509 -3.870 -3.945 0.338 -3.817 -3.537 2.801 -3.902 0.788 0.103 -1.330 -1.489 -2.347 ML 16 14 6 19 6 1 2 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 2 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 2 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 2 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 56 a u - - MP 21 20 6 25 6 2 5 66 85 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -3.115 -0.995 -3.172 2.356 -3.564 -3.972 0.375 -3.598 -3.325 2.270 -3.782 0.583 0.160 -3.234 -1.373 -0.940 ML 22 20 6 25 6 1 2 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 2 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 2 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 2 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 55 u a - - MP 27 26 6 31 4 2 3 64 83 -7.715 -7.922 -0.031 -6.337 -0.975 -1.830 -1.814 1.037 -0.911 -1.041 1.307 -1.236 -1.881 0.847 -2.454 -0.526 1.662 -0.317 0.305 -0.308 ML 28 26 6 31 4 1 1 65 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 1 65 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 0 64 83 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 2 67 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 2 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 33 32 6 35 3 1 1 62 81 -9.041 -0.214 -2.877 1.358 -2.255 -0.096 -1.778 D 34 32 6 35 3 0 0 61 80 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 1 63 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 54 - u - - MR 36 35 3 38 5 1 2 61 80 -7.551 -0.028 -7.367 -7.579 -8.471 -0.069 0.079 -1.359 0.679 D 37 35 3 38 5 0 0 60 79 -6.336 -0.315 -3.962 -5.393 -3.388 IR 38 38 3 38 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 53 G C - - MP 39 38 3 43 6 2 3 60 79 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -4.234 -1.140 -4.161 1.479 -5.126 -4.655 -0.373 -4.708 -4.283 3.316 -4.606 -0.505 -0.634 -4.028 -2.360 -3.100 ML 40 38 3 43 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 52 C G - - MP 45 44 6 49 6 2 3 58 77 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -6.158 -6.199 -5.550 -2.370 -4.010 -5.749 3.848 -4.991 -5.707 -2.279 -5.739 -4.231 -0.721 -6.115 -1.811 -4.512 ML 46 44 6 49 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 C G - - MP 51 50 6 55 6 2 2 56 75 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -4.952 -4.999 -4.574 -1.148 -3.154 -4.926 3.355 -3.986 -4.611 -1.009 -4.872 -3.023 0.364 -4.961 1.535 -3.426 ML 52 50 6 55 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 C G - - MP 57 56 6 61 6 2 2 54 73 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -5.113 -5.167 -4.688 -1.300 -3.225 -5.007 3.568 -4.076 -4.735 -1.161 -4.969 -3.193 0.267 -5.098 0.578 -3.541 ML 58 56 6 61 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 49 C G - - MP 63 62 6 67 6 2 2 52 71 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -6.158 -6.199 -5.550 -2.370 -4.010 -5.749 3.848 -4.991 -5.707 -2.279 -5.739 -4.231 -0.721 -6.115 -1.811 -4.512 ML 64 62 6 67 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 48 G C - - MP 69 68 6 73 6 2 2 50 69 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -6.112 -3.773 -6.496 -0.784 -7.111 -5.199 -2.139 -6.728 -5.120 3.846 -5.384 -1.554 -2.501 -5.332 -4.277 -5.354 ML 70 68 6 73 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 47 u a - - MP 75 74 6 79 6 2 2 48 67 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -2.540 -2.640 -2.690 0.926 -2.350 -3.524 1.966 -2.818 -2.716 0.700 -1.065 -0.974 2.087 -2.842 0.880 -1.791 ML 76 74 6 79 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 46 G C - - MP 81 80 6 85 6 2 2 46 65 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -4.133 -0.907 -4.045 1.103 -5.027 -4.575 -0.274 -4.616 -4.227 3.273 -4.543 0.494 -0.532 -3.919 -2.255 -2.994 ML 82 80 6 85 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 45 u a - - MP 87 86 6 91 6 2 2 44 63 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -2.507 -1.350 -2.660 1.136 -2.356 -3.503 1.891 -2.805 -2.689 1.091 -3.242 -0.863 2.019 -2.803 0.591 -1.756 ML 88 86 6 91 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 44 U A - - MP 93 92 6 97 6 2 2 42 61 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -4.094 -3.971 -4.017 0.635 -3.000 -4.667 1.781 -3.676 -3.995 0.052 -4.423 -1.848 3.058 -4.269 -0.642 -2.852 ML 94 92 6 97 6 1 1 41 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 43 G C - - MP 99 98 6 103 6 2 2 40 59 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -5.336 -0.578 -5.438 -0.217 -6.372 -5.018 -1.468 -5.905 -4.851 3.703 -5.132 -1.176 -1.748 -4.834 -3.527 -4.352 ML 100 98 6 103 6 1 1 39 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 18 42 C G - - MP 105 104 6 109 6 2 2 38 57 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -4.949 -4.997 -4.572 -1.147 -3.154 -4.925 3.342 -3.985 -4.609 -1.008 -4.870 -3.022 0.364 -4.959 1.577 -3.425 ML 106 104 6 109 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 41 c g - - MP 111 110 6 115 6 2 2 36 55 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -2.766 -2.811 -2.899 0.623 -2.468 -3.733 2.192 -2.960 -2.912 1.144 -1.297 -1.023 2.141 -3.052 0.070 -1.941 ML 112 110 6 115 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 20 40 G C - - MP 117 116 6 121 6 2 2 34 53 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -6.112 -3.773 -6.496 -0.784 -7.111 -5.199 -2.139 -6.728 -5.120 3.846 -5.384 -1.554 -2.501 -5.332 -4.277 -5.354 ML 118 116 6 121 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 21 39 u a - - MP 123 122 6 127 6 2 2 32 51 -9.450 -9.389 -0.017 -8.166 -8.446 -8.841 -2.907 -2.999 -3.017 0.369 -2.529 -3.804 1.991 -3.055 -3.041 0.422 -0.263 -1.290 2.351 -3.188 0.877 -2.084 ML 124 122 6 127 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 22 38 C G - - MP 129 128 6 133 4 2 2 30 49 -7.715 -7.922 -0.031 -6.337 -6.158 -6.199 -5.550 -2.370 -4.010 -5.749 3.848 -4.991 -5.707 -2.279 -5.739 -4.231 -0.721 -6.115 -1.811 -4.512 ML 130 128 6 133 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 30 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 29 49 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - u - - - ML 135 134 6 137 3 1 1 27 46 -8.689 -0.012 -7.343 -0.680 -0.734 -0.081 0.871 D 136 134 6 137 3 0 0 27 45 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 138 137 3 140 3 1 1 26 45 -8.689 -0.012 -7.343 -2.987 -4.374 1.907 -3.727 D 139 137 3 140 3 0 0 25 44 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - A - - - ML 141 140 3 143 3 1 1 25 44 -8.689 -0.012 -7.343 1.902 -3.799 -3.305 -3.483 D 142 140 3 143 3 0 0 24 43 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - C - - - ML 144 143 3 146 3 1 1 24 43 -8.689 -0.012 -7.343 -3.429 1.881 -4.196 -2.553 D 145 143 3 146 3 0 0 23 42 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - C - - - ML 147 146 3 149 3 1 1 23 42 -8.689 -0.012 -7.343 -3.429 1.881 -4.196 -2.553 D 148 146 3 149 3 0 0 22 41 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - C - - - ML 150 149 3 152 3 1 1 22 41 -4.317 -0.084 -7.343 -3.429 1.881 -4.196 -2.553 D 151 149 3 152 3 0 0 20 39 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 23 42 -1.684 -0.642 -4.385 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - C - - - ML 153 152 3 155 3 1 1 20 39 -8.689 -0.012 -7.343 -3.429 1.881 -4.196 -2.553 D 154 152 3 155 3 0 0 20 39 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 156 155 3 158 3 1 1 19 38 -8.689 -0.012 -7.343 -3.429 1.881 -4.196 -2.553 D 157 155 3 158 3 0 0 19 37 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - G - - - ML 159 158 3 161 3 1 1 18 37 -8.689 -0.012 -7.343 -1.104 -0.493 1.283 -1.356 D 160 158 3 161 3 0 0 18 36 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - A - - - ML 162 161 3 164 3 1 1 17 35 -8.689 -0.012 -7.343 1.338 -2.245 -0.049 -1.762 D 163 161 3 164 3 0 0 17 35 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - C - - - ML 165 164 3 167 3 1 1 16 34 -8.689 -0.012 -7.343 -0.033 1.160 -2.065 -0.862 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - C - - - ML 168 167 3 170 3 1 1 14 33 -8.689 -0.630 -1.508 -3.429 1.881 -4.196 -2.553 D 169 167 3 170 3 0 0 14 33 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - C - - - ML 171 170 3 173 3 1 1 13 31 -8.077 -0.019 -6.731 -2.018 1.691 -2.848 -1.376 D 172 170 3 173 3 0 0 11 30 -8.824 -0.168 -3.216 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - c - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -1.408 0.860 -2.277 0.680 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME F6 ACC RF01791 DESC F6 TB sRNA LENG 58 MAXL 129 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:42:34 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 16 EFFN 8.246094 CKSUM 3443524201 STATS LOCAL MSV -7.9828 0.71930 STATS LOCAL VITERBI -8.3825 0.71930 STATS LOCAL FORWARD -3.8453 0.71930 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.85527 0.97266 1.18817 1.82799 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 0.00000 * 1 1.49831 0.79803 2.31891 1.47886 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 2 1.83329 1.64233 0.86954 1.48087 2 g - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 3 1.43653 2.75835 0.51713 2.27671 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 4 0.78669 2.91527 0.93134 2.33887 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 5 1.72916 1.40071 1.84110 0.87347 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 6 0.36365 3.65483 1.40129 3.41970 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 7 1.52293 3.30489 0.35373 3.14278 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 8 4.79290 0.04461 4.78781 3.61144 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 9 4.04228 0.34138 3.92604 1.37859 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 10 4.07893 0.19925 3.96393 1.93283 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 11 4.85712 0.04330 4.83018 3.62610 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 12 3.64288 4.66692 0.04632 4.63745 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 13 2.07170 1.33537 1.91231 0.76954 13 u - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 14 1.78646 3.17817 0.29849 3.01905 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 15 1.71026 1.39367 1.85478 0.88061 15 u - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 16 2.36017 1.70056 3.08209 0.38986 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 17 2.47889 4.40981 0.11572 4.32134 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 18 4.05819 0.35018 3.93558 1.35239 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 19 2.40381 1.13744 1.64438 0.92671 19 u - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 20 3.64395 4.66874 0.04624 4.63995 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 21 2.90235 1.37263 1.94345 0.60064 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 22 4.86527 0.04314 4.83549 3.62791 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 23 2.18833 2.01929 1.37185 0.69014 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 24 4.15386 5.19132 0.03119 4.66297 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 25 0.03022 4.81840 4.43731 4.61960 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 26 4.55058 0.03836 4.96121 3.90875 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 27 4.55058 0.03836 4.96121 3.90875 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 28 4.55058 0.03836 4.96121 3.90875 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.07559 2.76102 4.64881 0.27940 1.41157 1.09861 0.40547 29 4.55058 0.03836 4.96121 3.90875 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 30 4.55058 0.03836 4.96121 3.90875 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 31 2.70831 1.66989 0.36572 2.96840 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 32 0.37702 3.65206 1.36571 3.41248 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 33 1.44712 0.43029 3.46614 2.48655 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 34 4.55058 0.03836 4.96121 3.90875 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.52301 4.64881 0.92207 1.46634 0.26236 1.09861 0.40547 35 3.69339 0.08853 4.23230 3.09408 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03179 4.15759 4.15759 1.46634 0.26236 0.04702 3.08061 36 2.92708 0.68229 3.58978 0.88338 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 37 3.88418 4.97934 0.03717 4.70517 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 38 0.89155 2.89798 0.76183 2.68776 39 g - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 39 4.70725 0.05730 4.55515 3.32012 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 40 1.08661 1.93251 0.90162 2.18973 41 g - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 41 2.96421 4.07809 0.09483 3.81971 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 42 4.44694 0.07345 4.27014 3.09835 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 43 0.42324 3.26183 1.59816 2.25867 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 44 1.16467 1.84822 1.05741 1.69771 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 45 3.27191 0.37174 2.98795 1.50445 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 46 1.11409 2.37452 0.84013 1.91683 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 47 4.70935 0.05725 4.55635 3.32050 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 48 3.88573 4.98219 0.03709 4.70818 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 49 2.98242 4.11173 0.09247 3.85043 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 50 2.96568 4.08091 0.09462 3.82290 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 51 3.89277 4.99509 0.03672 4.72189 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 52 3.41623 0.34564 3.13676 1.53261 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.18810 4.64881 1.82081 1.46634 0.26236 1.09861 0.40547 53 1.48184 1.26717 2.59666 0.87555 54 u - - - 1.38629 1.38629 1.38629 1.38629 0.02285 4.48356 4.48356 1.46634 0.26236 0.11178 2.24663 54 1.19902 1.50643 1.43688 1.43068 55 a - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 55 2.98023 1.11989 2.71585 0.58563 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 56 2.87049 0.60185 2.56522 1.14373 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 57 1.81762 1.19455 1.45128 1.20238 58 c - - > 1.38629 1.38629 1.38629 1.38629 0.01933 4.64881 4.64881 1.46634 0.26236 1.09861 0.40547 58 1.15155 1.31125 1.91758 1.31898 59 a - - : 1.38629 1.38629 1.38629 1.38629 0.00971 4.63919 * 1.46634 0.26236 0.00000 * //