INFERNAL1/a [1.1.5 | Sep 2023] NAME F6 ACC RF01791 DESC F6 TB sRNA STATES 175 NODES 39 CLEN 57 W 72 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 01:38:15 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01791/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 4.699219 CKSUM 3443524201 NULL 0.000 0.000 0.000 0.000 GA 46.00 TC 46.00 NC 45.80 EFP7GF -14.1101 0.71931 ECMLC 0.57834 -5.73850 3.57980 1600000 262821 0.004566 ECMGC 0.41761 -15.37885 -0.55735 1600000 195068 0.002051 ECMLI 0.55636 -4.82211 4.28828 1600000 190757 0.006291 ECMGI 0.41400 -12.73395 1.50763 1600000 145439 0.002750 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 72 91 -7.785 -7.992 -0.030 -6.406 IL 1 1 2 1 4 1 5 77 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 4 76 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 5 72 91 -9.105 -0.011 -7.423 -0.066 0.672 -1.136 -0.006 D 4 2 3 5 3 0 0 71 90 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 3 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 59 - a - - MR 6 5 3 8 5 1 5 71 90 -7.805 -0.024 -7.620 -7.832 -8.724 0.336 0.008 -0.693 0.155 D 7 5 3 8 5 0 0 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 2 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 58 g c - - MP 9 8 3 13 6 2 6 70 89 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -1.722 -1.164 -2.098 0.943 -2.104 -0.728 1.195 -2.294 -1.113 1.575 -1.414 0.991 0.971 -2.075 0.211 -0.721 ML 10 8 3 13 6 1 1 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 1 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 57 g c - - MP 15 14 6 19 6 2 5 68 87 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -3.353 -0.663 -3.339 1.519 -3.937 -3.987 0.297 -3.869 -3.588 2.799 -3.947 0.828 0.061 -1.261 -1.537 -2.389 ML 16 14 6 19 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 56 a u - - MP 21 20 6 25 6 2 4 66 85 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -3.177 -0.962 -3.228 2.373 -3.642 -4.026 0.316 -3.662 -3.386 2.278 -3.839 0.610 0.102 -3.286 -1.437 -0.900 ML 22 20 6 25 6 1 1 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 55 u a - - MP 27 26 6 31 4 2 3 64 83 -7.785 -7.992 -0.030 -6.406 -0.955 -1.848 -1.832 1.019 -0.867 -0.970 1.289 -1.191 -1.899 0.829 -2.472 -0.544 1.649 -0.252 0.316 -0.271 ML 28 26 6 31 4 1 1 65 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 1 64 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 0 63 83 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 1 66 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 1 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 33 32 6 35 3 1 1 62 81 -9.105 -0.204 -2.945 1.361 -2.339 -0.060 -1.869 D 34 32 6 35 3 0 0 61 79 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 1 63 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 54 - u - - MR 36 35 3 38 5 1 1 61 80 -7.622 -0.027 -7.437 -7.650 -8.541 -0.086 0.092 -1.404 0.691 D 37 35 3 38 5 0 0 60 78 -6.334 -0.315 -3.960 -5.391 -3.385 IR 38 38 3 38 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 53 G C - - MP 39 38 3 43 6 2 2 60 79 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -4.277 -1.083 -4.200 1.505 -5.191 -4.694 -0.417 -4.753 -4.327 3.317 -4.647 -0.533 -0.677 -4.065 -2.407 -3.137 ML 40 38 3 43 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 52 C G - - MP 45 44 6 49 6 2 2 58 77 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -6.300 -6.354 -5.664 -2.527 -4.109 -5.845 3.862 -5.110 -5.837 -2.445 -5.841 -4.400 -0.847 -6.249 -1.926 -4.641 ML 46 44 6 49 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 C G - - MP 51 50 6 55 6 2 2 56 75 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -5.068 -5.125 -4.667 -1.268 -3.225 -5.003 3.371 -4.064 -4.708 -1.134 -4.958 -3.157 0.279 -5.064 1.571 -3.519 ML 52 50 6 55 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 C G - - MP 57 56 6 61 6 2 2 54 73 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -5.210 -5.274 -4.766 -1.403 -3.285 -5.072 3.583 -4.141 -4.816 -1.271 -5.041 -3.309 0.195 -5.184 0.610 -3.619 ML 58 56 6 61 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 49 C G - - MP 63 62 6 67 6 2 2 52 71 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -6.300 -6.354 -5.664 -2.527 -4.109 -5.845 3.862 -5.110 -5.837 -2.445 -5.841 -4.400 -0.847 -6.249 -1.926 -4.641 ML 64 62 6 67 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 48 G C - - MP 69 68 6 73 6 2 2 50 69 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -6.230 -3.833 -6.656 -0.872 -7.265 -5.242 -2.265 -6.876 -5.182 3.856 -5.441 -1.623 -2.626 -5.404 -4.415 -5.513 ML 70 68 6 73 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 47 u a - - MP 75 74 6 79 6 2 2 48 67 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -2.572 -2.673 -2.722 0.920 -2.379 -3.557 1.970 -2.848 -2.748 0.669 -0.991 -1.004 2.088 -2.875 0.917 -1.822 ML 76 74 6 79 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 46 G C - - MP 81 80 6 85 6 2 2 46 65 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -4.205 -0.849 -4.113 1.085 -5.122 -4.624 -0.340 -4.691 -4.291 3.301 -4.601 0.402 -0.598 -3.976 -2.327 -3.060 ML 82 80 6 85 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 45 u a - - MP 87 86 6 91 6 2 2 44 63 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -2.516 -1.298 -2.671 1.143 -2.370 -3.515 1.892 -2.819 -2.700 1.077 -3.254 -0.886 2.013 -2.814 0.621 -1.770 ML 88 86 6 91 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 44 U A - - MP 93 92 6 97 6 2 2 42 61 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -4.172 -4.048 -4.088 0.638 -3.053 -4.734 1.764 -3.735 -4.065 -0.017 -4.489 -1.917 3.084 -4.344 -0.692 -2.917 ML 94 92 6 97 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 43 G C - - MP 99 98 6 103 6 2 2 40 59 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -5.453 -0.510 -5.573 -0.308 -6.520 -5.074 -1.590 -6.036 -4.922 3.717 -5.199 -1.250 -1.870 -4.921 -3.657 -4.484 ML 100 98 6 103 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 18 42 C G - - MP 105 104 6 109 6 2 2 38 57 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -5.071 -5.127 -4.669 -1.269 -3.225 -5.004 3.385 -4.065 -4.710 -1.135 -4.959 -3.158 0.279 -5.066 1.523 -3.521 ML 106 104 6 109 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 41 c g - - MP 111 110 6 115 6 2 2 36 55 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -2.867 -2.900 -2.995 0.576 -2.528 -3.828 2.218 -3.030 -3.001 1.136 -1.549 -1.078 2.186 -3.150 0.064 -2.016 ML 112 110 6 115 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 20 40 G C - - MP 117 116 6 121 6 2 2 34 53 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -6.230 -3.833 -6.656 -0.872 -7.265 -5.242 -2.265 -6.876 -5.182 3.856 -5.441 -1.623 -2.626 -5.404 -4.415 -5.513 ML 118 116 6 121 6 1 1 33 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 21 39 u a - - MP 123 122 6 127 6 2 2 32 51 -9.486 -9.425 -0.016 -8.202 -8.482 -8.877 -2.985 -3.074 -3.090 0.308 -2.583 -3.873 2.000 -3.116 -3.113 0.361 -0.164 -1.356 2.362 -3.264 0.923 -2.151 ML 124 122 6 127 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 22 38 C G - - MP 129 128 6 133 4 2 2 30 48 -7.785 -7.992 -0.030 -6.406 -6.300 -6.354 -5.664 -2.527 -4.109 -5.845 3.862 -5.110 -5.837 -2.445 -5.841 -4.400 -0.847 -6.249 -1.926 -4.641 ML 130 128 6 133 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - u - - - ML 135 134 6 137 3 1 1 27 46 -8.755 -0.012 -7.409 -0.708 -0.740 -0.041 0.861 D 136 134 6 137 3 0 0 26 45 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 138 137 3 140 3 1 1 26 45 -8.755 -0.012 -7.409 -3.097 -4.495 1.914 -3.839 D 139 137 3 140 3 0 0 25 44 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - A - - - ML 141 140 3 143 3 1 1 25 43 -8.755 -0.012 -7.409 1.910 -3.921 -3.418 -3.613 D 142 140 3 143 3 0 0 24 43 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - C - - - ML 144 143 3 146 3 1 1 24 42 -8.755 -0.012 -7.409 -3.562 1.891 -4.313 -2.671 D 145 143 3 146 3 0 0 23 42 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - C - - - ML 147 146 3 149 3 1 1 23 41 -8.755 -0.012 -7.409 -3.562 1.891 -4.313 -2.671 D 148 146 3 149 3 0 0 22 41 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - C - - - ML 150 149 3 152 3 1 1 22 40 -4.657 -0.067 -7.409 -3.562 1.891 -4.313 -2.671 D 151 149 3 152 3 0 0 20 38 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 23 41 -1.643 -0.665 -4.343 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - C - - - ML 153 152 3 155 3 1 1 20 38 -8.755 -0.012 -7.409 -3.562 1.891 -4.313 -2.671 D 154 152 3 155 3 0 0 20 38 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 156 155 3 158 3 1 1 19 37 -8.755 -0.012 -7.409 -3.562 1.891 -4.313 -2.671 D 157 155 3 158 3 0 0 18 37 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - G - - - ML 159 158 3 161 3 1 1 17 36 -8.755 -0.012 -7.409 -1.171 -0.476 1.302 -1.432 D 160 158 3 161 3 0 0 17 36 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - A - - - ML 162 161 3 164 3 1 1 16 34 -8.755 -0.012 -7.409 1.348 -2.333 -0.029 -1.859 D 163 161 3 164 3 0 0 16 35 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - C - - - ML 165 164 3 167 3 1 1 14 33 -8.755 -0.012 -7.409 -0.027 1.178 -2.137 -0.918 D 166 164 3 167 3 0 0 15 33 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - C - - - ML 168 167 3 170 3 1 1 10 20 -1.484 -0.652 -7.409 -3.562 1.891 -4.313 -2.671 D 169 167 3 170 3 0 0 8 18 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 10 20 -2.721 -0.278 -5.421 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - c - - - ML 171 170 3 173 2 1 1 1 1 * 0.000 -1.476 0.851 -2.350 0.714 D 172 170 3 173 2 0 0 0 0 * 0.000 IL 173 173 3 173 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 174 173 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME F6 ACC RF01791 DESC F6 TB sRNA LENG 57 MAXL 127 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 01:38:15 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01791/CM NSEQ 16 EFFN 9.136719 CKSUM 3443524201 STATS LOCAL MSV -7.8440 0.71931 STATS LOCAL VITERBI -8.2556 0.71931 STATS LOCAL FORWARD -3.9038 0.71931 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.85000 0.98541 1.17703 1.82459 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 0.00000 * 1 1.48939 0.79477 2.33297 1.48811 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 2 1.85944 1.65100 0.84629 1.49889 2 g - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 3 1.41977 2.81862 0.51457 2.29476 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 4 0.76380 3.03069 0.93232 2.38393 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 5 1.74930 1.39072 1.87301 0.85909 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 6 0.36335 3.78447 1.37171 3.56616 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 7 1.49733 3.38458 0.35312 3.22164 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 8 4.92111 0.03870 4.92903 3.75334 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 9 4.16448 0.33464 4.05884 1.37993 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 10 4.19282 0.19119 4.08754 1.95093 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 11 4.98669 0.03753 4.97296 3.76869 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 12 3.72698 4.76454 0.04221 4.74019 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 13 2.10093 1.33540 1.93616 0.75428 13 u - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 14 1.79174 3.26632 0.28705 3.10759 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 15 1.70230 1.39642 1.87724 0.87409 15 u - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 16 2.36307 1.73332 3.20640 0.37299 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 17 2.47897 4.54456 0.11201 4.46426 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 18 4.17959 0.32368 4.06748 1.41019 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 19 2.48165 1.12374 1.69081 0.89903 19 u - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 20 3.72786 4.76606 0.04215 4.74228 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 21 3.05784 1.37631 1.95529 0.58165 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 22 4.99423 0.03740 4.97795 3.77041 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 23 2.24641 2.02935 1.33471 0.69401 23 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 24 4.25945 5.31177 0.02795 4.76770 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 25 0.02664 4.94619 4.56047 4.74185 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 26 4.66032 0.03436 5.05319 4.02162 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 27 4.66032 0.03436 5.05319 4.02162 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 28 4.66032 0.03436 5.05319 4.02162 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06166 2.97974 4.71185 0.32264 1.28821 1.09861 0.40547 29 4.66032 0.03436 5.05319 4.02162 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 30 4.66032 0.03436 5.05319 4.02162 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 31 2.80786 1.64248 0.35649 3.07825 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 32 0.37227 3.78355 1.34816 3.56233 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 33 1.43572 0.41694 3.58451 2.58700 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 34 4.66032 0.03436 5.05319 4.02162 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.53779 0.89901 4.71185 0.04360 3.15442 1.09861 0.40547 35 3.03056 0.68972 3.70040 0.85501 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 36 4.01982 5.11918 0.03231 4.84697 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 37 0.88347 3.04657 0.73255 2.83958 39 g - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 38 4.79952 0.05236 4.65706 3.40272 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 39 1.05359 1.94787 0.90459 2.26306 41 g - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 40 3.06557 4.20745 0.08437 3.94255 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 41 4.57524 0.06494 4.41106 3.20829 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 42 0.40286 3.38600 1.63656 2.27206 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 43 1.16855 1.85214 1.04780 1.70609 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 44 3.35908 0.34540 3.07665 1.55505 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 45 1.11264 2.44075 0.81652 1.95019 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 46 4.80246 0.05230 4.65875 3.40326 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 47 4.02200 5.12316 0.03221 4.85121 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 48 3.07885 4.23348 0.08280 3.96608 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 49 3.06787 4.21213 0.08408 3.94746 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 50 4.03056 5.13889 0.03182 4.86795 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 51 3.49509 0.33979 3.21697 1.52484 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.17742 4.71185 1.87354 1.46634 0.26236 1.09861 0.40547 52 1.49844 1.25525 2.66464 0.86300 54 u - - - 1.38629 1.38629 1.38629 1.38629 0.02124 4.55567 4.55567 1.46634 0.26236 0.11069 2.25586 53 1.19872 1.48777 1.45315 1.43249 55 a - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 54 3.09652 1.12606 2.83135 0.55940 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 55 2.93311 0.59838 2.62574 1.12492 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 56 1.84915 1.18485 1.46217 1.18711 58 c - - > 1.38629 1.38629 1.38629 1.38629 0.01814 4.71185 4.71185 1.46634 0.26236 1.09861 0.40547 57 1.13678 1.32556 1.92222 1.31971 59 a - - : 1.38629 1.38629 1.38629 1.38629 0.00911 4.70282 * 1.46634 0.26236 0.00000 * //