INFERNAL1/a [1.1.5 | Sep 2023] NAME bablM ACC RF01784 DESC bablM sRNA STATES 219 NODES 65 CLEN 70 W 86 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 20:36:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01784/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 1.913086 CKSUM 3289045909 NULL 0.000 0.000 0.000 0.000 GA 38.00 TC 38.00 NC 37.90 EFP7GF -8.9507 0.71890 ECMLC 0.48298 -7.11436 4.98334 1600000 413772 0.002900 ECMGC 0.36737 -14.63183 -0.29731 1600000 77462 0.005164 ECMLI 0.48411 -4.63299 6.84068 1600000 310067 0.003870 ECMGI 0.40853 -9.05547 3.21465 1600000 60128 0.006652 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 86 106 -6.941 -7.148 -0.053 -5.562 IL 1 1 2 1 4 4 33 90 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 32 89 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 4 32 86 106 -7.958 -0.021 -6.612 -0.965 -1.915 1.452 -1.039 D 4 2 3 5 3 1 27 85 105 -6.174 -1.687 -0.566 IL 5 5 3 5 3 3 31 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 4 32 85 105 -7.958 -0.021 -6.612 1.716 -2.359 -1.992 -1.900 D 7 5 3 8 3 0 26 84 104 -6.174 -1.687 -0.566 IL 8 8 3 8 3 3 31 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 4 31 84 104 -7.958 -0.021 -6.612 1.716 -2.359 -1.992 -1.900 D 10 8 3 11 3 0 25 83 103 -6.174 -1.687 -0.566 IL 11 11 3 11 3 3 30 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 3 30 83 103 -7.958 -0.021 -6.612 -1.474 -1.473 -2.207 1.615 D 13 11 3 14 3 0 25 81 101 -6.174 -1.687 -0.566 IL 14 14 3 14 3 2 29 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 3 29 82 102 -7.958 -0.021 -6.612 -1.726 1.620 -2.550 -1.143 D 16 14 3 17 3 0 24 80 100 -6.174 -1.687 -0.566 IL 17 17 3 17 3 2 28 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - c - - - ML 18 17 3 20 3 3 28 81 101 -7.958 -0.021 -6.612 -0.750 0.754 -1.544 0.461 D 19 17 3 20 3 0 23 79 99 -6.174 -1.687 -0.566 IL 20 20 3 20 3 2 28 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 3 28 80 100 -7.958 -0.021 -6.612 1.286 -1.533 -0.478 -1.004 D 22 20 3 23 3 0 23 78 98 -6.174 -1.687 -0.566 IL 23 23 3 23 3 2 27 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - u - - - ML 24 23 3 26 3 2 27 79 98 -7.958 -0.021 -6.612 0.136 -0.775 -0.693 0.764 D 25 23 3 26 3 0 22 77 97 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 26 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 2 26 78 97 -7.958 -0.021 -6.612 -0.525 -0.999 -1.505 1.294 D 28 26 3 29 3 0 21 76 96 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 25 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 2 25 77 96 -7.958 -0.021 -6.612 -1.474 -1.473 -2.207 1.615 D 31 29 3 32 3 0 21 75 95 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 25 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 2 24 76 95 -7.958 -0.021 -6.612 1.716 -2.359 -1.992 -1.900 D 34 32 3 35 3 0 20 74 94 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 24 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 2 24 75 94 -7.958 -0.021 -6.612 1.403 -1.474 -1.402 -0.697 D 37 35 3 38 3 0 19 73 93 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 23 77 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 23 73 93 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 40 38 3 41 3 0 19 72 92 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 22 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 70 - G - - MR 42 41 3 44 3 1 22 72 92 -8.349 -0.019 -6.667 -0.595 -2.075 1.455 -1.480 D 43 41 3 44 3 0 17 71 90 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 21 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 69 - G - - MR 45 44 3 47 3 1 21 71 91 -8.349 -0.019 -6.667 -1.567 -2.786 1.721 -2.172 D 46 44 3 47 3 0 17 70 89 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 20 72 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 68 - U - - MR 48 47 3 50 3 1 20 70 90 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 49 47 3 50 3 0 16 69 88 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 20 71 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 67 - A - - MR 51 50 3 53 3 1 19 69 89 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 52 50 3 53 3 0 15 68 87 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 19 70 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 66 - A - - MR 54 53 3 56 3 1 18 68 88 -8.349 -0.091 -4.112 1.716 -2.359 -1.992 -1.900 D 55 53 3 56 3 0 14 67 86 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 18 69 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 65 - A - - MR 57 56 3 59 3 1 18 67 87 -8.278 -0.020 -6.596 1.681 -2.206 -1.855 -1.733 D 58 56 3 59 3 0 14 66 86 -6.874 -0.927 -1.103 IR 59 59 3 59 3 1 17 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 64 - A - - MR 60 59 3 62 3 1 17 66 86 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 61 59 3 62 3 0 12 65 84 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 17 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 63 - c - - MR 63 62 3 65 3 1 17 65 85 -8.349 -0.019 -6.667 -0.330 0.334 -0.462 0.284 D 64 62 3 65 3 0 12 64 83 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 16 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 62 - A - - MR 66 65 3 68 3 1 16 64 84 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 67 65 3 68 3 0 11 63 82 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 15 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 61 - U - - MR 69 68 3 71 3 1 15 63 83 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 70 68 3 71 3 0 10 62 81 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 14 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 60 - A - - MR 72 71 3 74 3 1 14 62 82 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 73 71 3 74 3 0 10 61 80 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 14 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 59 - U - - MR 75 74 3 77 3 1 13 61 81 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 76 74 3 77 3 0 9 60 79 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 13 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 58 - U - - MR 78 77 3 80 3 1 12 60 80 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 79 77 3 80 3 0 8 59 78 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 12 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 57 - U - - MR 81 80 3 83 3 1 11 59 79 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 82 80 3 83 3 0 8 58 77 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 11 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 56 - U - - MR 84 83 3 86 3 1 10 58 78 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 85 83 3 86 3 0 7 57 76 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 10 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 55 - G - - MR 87 86 3 89 3 1 10 57 77 -8.349 -0.019 -6.667 -0.595 -2.075 1.455 -1.480 D 88 86 3 89 3 0 6 56 75 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 9 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 54 - U - - MR 90 89 3 92 3 1 9 56 76 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 91 89 3 92 3 0 6 55 74 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 9 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 53 - U - - MR 93 92 3 95 3 1 8 55 75 -8.349 -0.019 -6.667 -1.474 -1.473 -2.207 1.615 D 94 92 3 95 3 0 5 54 73 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 8 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 52 - A - - MR 96 95 3 98 3 1 7 54 74 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 97 95 3 98 3 0 5 53 73 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 7 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 51 - A - - MR 99 98 3 101 2 1 6 53 73 -8.349 -0.004 1.716 -2.359 -1.992 -1.900 D 100 98 3 101 2 0 5 53 72 -4.432 -0.068 IR 101 101 3 101 2 1 6 54 74 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 34 ] - - - - - - B 102 101 3 103 150 0 5 52 72 [ BEGL 35 ] - - - - - - S 103 102 1 104 4 0 0 29 48 -0.045 -6.830 -6.237 -6.877 [ MATP 36 ] 14 28 U A - - MP 104 103 1 108 6 2 2 29 48 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -3.197 -3.170 -3.279 0.261 -2.772 -4.055 1.317 -3.290 -1.426 0.472 -3.808 -1.321 3.085 -3.461 -0.588 -2.275 ML 105 103 1 108 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 1 108 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 1 108 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 15 27 C G - - MP 110 109 6 114 6 2 2 27 46 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -4.543 -4.448 -4.234 -0.681 -2.953 -4.647 3.549 -3.763 -4.283 -0.440 -4.545 -2.395 0.562 -4.613 -0.659 -3.123 ML 111 109 6 114 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 16 26 A U - - MP 116 115 6 120 6 2 2 25 44 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -3.785 -2.818 -3.804 3.328 -4.139 -5.201 0.160 -3.847 -3.696 1.085 -4.244 -0.295 -0.257 -4.390 -1.781 -2.638 ML 117 115 6 120 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 17 25 A U - - MP 122 121 6 126 6 2 2 23 42 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -3.785 -2.818 -3.804 3.328 -4.139 -5.201 0.160 -3.847 -3.696 1.085 -4.244 -0.295 -0.257 -4.390 -1.781 -2.638 ML 123 121 6 126 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 18 24 u g - - MP 128 127 6 132 4 2 2 21 40 -6.941 -7.148 -0.053 -5.562 -4.080 -4.000 -3.785 -0.336 -2.545 -4.211 1.741 -3.318 -3.825 -0.141 -4.118 -2.002 0.893 -4.167 2.999 -2.697 ML 129 127 6 132 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 131 127 6 132 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 132 132 5 132 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 133 133 6 133 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 19 - C - - - ML 134 133 6 136 3 1 1 18 36 -7.958 -0.021 -6.612 -1.726 1.620 -2.550 -1.143 D 135 133 6 136 3 0 0 17 36 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 20 - a - - - ML 137 136 3 139 3 1 1 16 35 -7.958 -0.021 -6.612 0.612 -0.854 -1.044 0.520 D 138 136 3 139 3 0 0 16 34 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 21 - c - - - ML 140 139 3 142 3 1 1 15 33 -7.958 -0.021 -6.612 -0.504 0.800 -0.407 -0.323 D 141 139 3 142 3 0 0 15 33 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 22 - A - - - ML 143 142 3 145 3 1 1 13 31 -7.958 -0.021 -6.612 1.457 -1.728 -0.927 -1.230 D 144 142 3 145 3 0 0 13 32 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 23 - G - - - ML 146 145 3 148 2 1 1 1 1 * 0.000 0.130 -1.610 1.059 -1.016 D 147 145 3 148 2 0 0 0 0 * 0.000 IL 148 148 3 148 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 149 148 3 -1 0 0 0 0 0 [ BEGR 47 ] - - - - - - S 150 102 1 151 3 0 0 37 56 -7.958 -0.021 -6.612 IL 151 151 2 151 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 29 - C - - - ML 152 151 2 154 3 1 1 37 56 -7.958 -0.021 -6.612 -1.726 1.620 -2.550 -1.143 D 153 151 2 154 3 0 0 35 55 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 30 - C - - - ML 155 154 3 157 3 1 1 36 55 -7.958 -0.021 -6.612 -0.858 1.213 -1.195 -0.529 D 156 154 3 157 3 0 0 34 54 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 31 - G - - - ML 158 157 3 160 3 1 1 34 54 -7.958 -0.021 -6.612 -0.498 -0.713 1.048 -0.703 D 159 157 3 160 3 0 0 33 52 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 32 - U - - - ML 161 160 3 163 5 1 1 33 52 -7.088 -0.039 -6.903 -7.116 -8.007 -0.149 -0.894 -1.298 1.106 D 162 160 3 163 5 0 0 32 51 -4.959 -0.803 -4.221 -2.596 -2.508 IL 163 163 3 163 5 1 1 34 53 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 33 50 a u - - MP 164 163 3 168 6 2 2 32 51 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -3.346 -2.343 -3.469 2.343 -4.067 -4.742 0.185 -3.640 -3.314 1.602 -3.849 2.168 -0.073 -3.889 -1.709 -2.296 ML 165 163 3 168 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 3 168 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 3 168 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 34 49 G C - - MP 170 169 6 174 6 2 2 30 49 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -3.932 -0.564 -3.964 0.715 -4.508 -4.339 -0.072 -4.370 -3.883 3.373 -4.257 -0.420 -0.354 -3.821 -2.013 -2.930 ML 171 169 6 174 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 35 48 A U - - MP 176 175 6 180 4 2 2 28 47 -6.941 -7.148 -0.053 -5.562 -3.785 -2.818 -3.804 3.328 -4.139 -5.201 0.160 -3.847 -3.696 1.085 -4.244 -0.295 -0.257 -4.390 -1.781 -2.638 ML 177 175 6 180 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 179 175 6 180 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 180 180 5 180 4 1 1 30 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 181 181 6 181 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 36 - A - - - ML 182 181 6 184 3 1 1 26 44 -8.349 -0.019 -6.667 1.716 -2.359 -1.992 -1.900 D 183 181 6 184 3 0 0 24 43 -5.620 -0.734 -1.403 IL 184 184 3 184 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 56 ] - 47 - G - - MR 185 184 3 187 5 1 1 25 43 -7.088 -0.039 -6.903 -7.116 -8.007 -1.567 -2.786 1.721 -2.172 D 186 184 3 187 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 187 187 3 187 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 37 46 U A - - MP 188 187 3 192 6 2 2 24 42 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -4.183 -4.008 -4.022 -0.303 -2.965 -4.587 1.363 -3.661 -4.027 -0.048 -4.400 -1.907 3.325 -4.335 -0.642 -2.852 ML 189 187 3 192 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 190 187 3 192 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 191 187 3 192 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 192 192 5 192 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 193 193 6 193 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 38 45 C G - - MP 194 193 6 198 6 2 2 22 40 -9.105 -9.044 -0.021 -7.821 -8.100 -8.496 -4.543 -4.448 -4.234 -0.681 -2.953 -4.647 3.549 -3.763 -4.283 -0.440 -4.545 -2.395 0.562 -4.613 -0.659 -3.123 ML 195 193 6 198 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 6 198 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 6 198 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 39 44 C G - - MP 200 199 6 204 4 2 2 20 38 -6.941 -7.148 -0.053 -5.562 -3.877 -3.838 -3.688 -0.102 -2.531 -4.188 3.153 -3.281 -3.712 0.129 -4.059 -1.851 1.081 -3.983 0.828 -2.574 ML 201 199 6 204 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 203 199 6 204 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 204 204 5 204 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 205 205 6 205 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 40 - g - - - ML 206 205 6 208 3 1 1 16 35 -7.958 -0.021 -6.612 0.414 -1.476 0.820 -0.881 D 207 205 6 208 3 0 0 16 34 -6.174 -1.687 -0.566 IL 208 208 3 208 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 41 - U - - - ML 209 208 3 211 3 1 1 15 33 -7.958 -0.021 -6.612 -1.474 -1.473 -2.207 1.615 D 210 208 3 211 3 0 0 15 33 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 42 - U - - - ML 212 211 3 214 3 1 1 13 31 -7.958 -0.021 -6.612 -0.512 -0.995 -1.498 1.288 D 213 211 3 214 3 0 0 13 32 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 43 - U - - - ML 215 214 3 217 2 1 1 1 1 * 0.000 -1.474 -1.473 -2.207 1.615 D 216 214 3 217 2 0 0 0 0 * 0.000 IL 217 217 3 217 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 218 217 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME bablM ACC RF01784 DESC bablM sRNA LENG 70 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 20:36:08 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01784/CM NSEQ 12 EFFN 2.305664 CKSUM 3289045909 STATS LOCAL MSV -8.6239 0.71890 STATS LOCAL VITERBI -8.9789 0.71890 STATS LOCAL FORWARD -3.5687 0.71890 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.19364 1.74196 1.57641 1.15521 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 0.00000 * 1 2.18845 2.85960 0.32703 2.21134 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 2 0.15786 3.22213 2.94789 2.92422 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 3 0.15786 3.22213 2.94789 2.92422 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 4 2.59386 2.56057 3.11061 0.21886 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 5 2.82550 0.20563 3.40135 2.37239 5 C - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 6 1.99489 0.81522 2.55773 1.06726 6 c - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 7 0.45714 2.55072 1.72989 2.19305 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 8 1.29568 1.96787 1.88542 0.83294 8 u - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 9 1.81794 2.16667 2.53741 0.44004 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 10 2.59386 2.56057 3.11061 0.21886 10 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 11 0.15786 3.22213 2.94789 2.92422 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 12 0.37311 2.50121 2.45987 1.93811 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 13 2.59386 2.56057 3.11061 0.21886 13 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 14 2.47227 1.84906 2.08545 0.45575 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 15 3.18590 0.24382 2.95455 2.09617 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 16 0.34884 2.75231 1.81697 2.68536 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 17 0.34903 2.75161 1.81685 2.68434 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 18 2.92487 1.56807 2.71346 0.39813 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 19 2.82550 0.20563 3.40135 2.37239 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 20 0.94369 2.02648 2.16121 1.01108 20 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 21 1.81999 0.76708 1.67518 1.68024 21 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 22 0.33634 2.70280 2.07679 2.37223 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 23 1.31260 2.60844 0.60378 2.20285 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 24 2.10749 2.88959 0.28320 2.66659 24 G - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 25 2.90860 2.10858 2.56229 0.29181 25 U - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 26 2.90746 2.10844 2.56187 0.29196 26 U - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 27 2.36903 3.11420 0.21231 2.93184 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 28 0.48062 2.42116 1.67543 2.24853 28 A - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 29 2.82550 0.20563 3.40135 2.37239 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 30 2.11935 0.47138 2.29785 1.86257 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 31 1.82148 1.90719 0.59515 1.97877 31 G - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 32 1.51986 2.07574 2.36746 0.57612 32 U - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 33 1.02184 2.68182 0.71290 2.50828 33 g - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 34 1.90400 2.82378 0.32289 2.69424 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 35 0.34893 2.75197 1.81691 2.68487 35 A - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 36 0.15786 3.22213 2.94789 2.92422 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 37 2.94882 1.88846 2.69765 0.31618 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 38 3.17916 0.24457 2.95137 2.09501 38 C - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 39 2.71687 0.51325 2.48224 1.37906 39 C - - < 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 40 1.09511 2.50436 0.77438 2.09737 40 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 41 2.59386 2.56057 3.11061 0.21886 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 42 1.80750 2.16310 2.53121 0.44410 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 43 2.59386 2.56057 3.11061 0.21886 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 44 1.95141 2.64550 0.35213 2.47974 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 45 2.37539 3.12281 0.21042 2.94226 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 46 0.35756 2.88689 1.72589 2.70526 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 47 2.68263 3.55806 0.15133 3.13359 47 G - - - 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 48 2.91092 2.10885 2.56316 0.29151 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 49 2.92151 0.31903 2.63968 1.91114 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 50 2.71951 1.69442 2.47869 0.40566 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 51 0.15786 3.22213 2.94789 2.92422 51 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 52 0.15786 3.22213 2.94789 2.92422 52 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 53 2.59386 2.56057 3.11061 0.21886 53 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 54 2.59386 2.56057 3.11061 0.21886 54 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 55 1.88167 2.97559 0.32817 2.57169 55 G - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 56 2.59386 2.56057 3.11061 0.21886 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 57 2.59386 2.56057 3.11061 0.21886 57 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 58 2.59386 2.56057 3.11061 0.21886 58 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 59 2.59386 2.56057 3.11061 0.21886 59 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 60 0.15786 3.22213 2.94789 2.92422 60 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 61 2.59386 2.56057 3.11061 0.21886 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 62 0.15786 3.22213 2.94789 2.92422 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 63 1.66009 1.11978 1.70671 1.19711 63 c - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 64 0.15786 3.22213 2.94789 2.92422 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.10175 3.90689 2.56863 1.46634 0.26236 1.09861 0.40547 65 0.17940 3.10492 2.84231 2.79513 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.04355 3.84869 3.84869 1.46634 0.26236 0.42173 1.06685 66 0.15786 3.22213 2.94789 2.92422 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 67 0.15786 3.22213 2.94789 2.92422 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 68 2.59386 2.56057 3.11061 0.21886 68 U - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 69 2.68263 3.55806 0.15133 3.13359 69 G - - : 1.38629 1.38629 1.38629 1.38629 0.04104 3.90689 3.90689 1.46634 0.26236 1.09861 0.40547 70 1.88167 2.97559 0.32817 2.57169 70 G - - : 1.38629 1.38629 1.38629 1.38629 0.02073 3.88658 * 1.46634 0.26236 0.00000 * //