INFERNAL1/a [1.1.4 | Dec 2020] NAME SAM-III ACC RF01767 DESC SAM-III riboswitch aptamer (SMK box) STATES 255 NODES 72 CLEN 82 W 132 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 16:27:20 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/SO_sanity_check/RF01767/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 25 EFFN 2.377319 CKSUM 3560452150 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.10 NC 44.90 EFP7GF -7.3623 0.71884 ECMLC 0.69469 -5.61385 2.45175 1600000 325528 0.003686 ECMGC 0.41470 -12.49871 -1.72999 1600000 34797 0.011495 ECMLI 0.72442 -2.20069 4.97187 1600000 216651 0.005539 ECMGI 0.46234 -6.73780 2.87469 1600000 34055 0.011746 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 132 187 -7.121 -7.328 -0.047 -5.742 IL 1 1 2 1 4 9 38 134 189 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 9 38 134 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 9 38 132 187 -8.125 -0.061 -4.733 0.078 -0.736 -0.185 0.550 D 4 2 3 5 3 5 34 130 185 -6.174 -1.687 -0.566 IL 5 5 3 5 3 9 37 133 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 9 37 131 186 -8.084 -0.019 -6.738 0.575 -0.711 -1.062 0.506 D 7 5 3 8 3 5 33 129 184 -6.547 -2.060 -0.416 IL 8 8 3 8 3 8 37 132 187 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 9 36 130 185 -8.084 -0.019 -6.738 -0.008 -0.157 -0.352 0.406 D 10 8 3 11 3 5 32 128 183 -6.547 -1.097 -0.938 IL 11 11 3 11 3 8 36 131 186 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 8 35 129 184 -8.125 -0.018 -6.779 0.288 -0.017 -0.301 -0.030 D 13 11 3 14 3 4 31 127 182 -6.174 -1.687 -0.566 IL 14 14 3 14 3 7 35 130 185 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 7 34 128 183 -8.125 -0.018 -6.779 -1.455 -2.530 1.657 -1.701 D 16 14 3 17 3 4 31 126 181 -6.174 -1.687 -0.566 IL 17 17 3 17 3 7 34 129 184 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 7 33 127 182 -8.125 -0.018 -6.779 -0.793 -1.070 -0.917 1.273 D 19 17 3 20 3 3 30 125 180 -6.174 -1.687 -0.566 IL 20 20 3 20 3 6 33 128 183 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 6 32 126 181 -8.125 -0.141 -3.483 -1.789 -1.733 -2.536 1.695 D 22 20 3 23 3 3 29 124 179 -6.174 -1.687 -0.566 IL 23 23 3 23 3 6 33 127 182 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 24 23 3 26 3 6 32 125 181 -8.005 -0.020 -6.659 0.679 -0.978 -0.067 -0.095 D 25 23 3 26 3 3 29 123 178 -7.047 -1.883 -0.471 IL 26 26 3 26 3 6 32 126 181 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - c - - - ML 27 26 3 29 3 5 31 124 180 -3.731 -0.128 -6.687 -0.557 0.942 -1.519 0.070 D 28 26 3 29 3 3 28 123 178 -6.892 -0.784 -1.284 IL 29 29 3 29 3 5 31 125 180 -1.407 -0.788 -4.514 0.000 0.000 0.000 0.000 [ MATL 10 ] 13 - A - - - ML 30 29 3 32 3 4 30 123 178 -8.125 -0.018 -6.779 1.497 -1.725 -1.281 -1.112 D 31 29 3 32 3 2 27 121 176 -6.174 -1.687 -0.566 IL 32 32 3 32 3 4 30 124 179 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 14 - A - - - ML 33 32 3 35 3 3 29 122 177 -8.125 -0.492 -1.809 1.781 -2.699 -2.298 -2.274 D 34 32 3 35 3 2 27 120 175 -6.174 -1.687 -0.566 IL 35 35 3 35 3 4 30 123 179 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 15 - u - - - ML 36 35 3 38 3 3 29 122 177 -1.453 -0.762 -4.468 0.141 -0.563 -0.013 0.298 D 37 35 3 38 3 1 26 119 174 -8.121 -1.005 -1.006 IL 38 38 3 38 3 3 29 122 177 -0.848 -1.568 -3.225 0.000 0.000 0.000 0.000 [ MATL 13 ] 20 - g - - - ML 39 38 3 41 3 2 27 119 175 -8.130 -0.137 -3.523 0.539 -1.222 0.555 -0.623 D 40 38 3 41 3 1 26 118 174 -6.960 -0.247 -2.743 IL 41 41 3 41 3 3 28 120 175 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 148 - G - - MR 42 41 3 44 3 3 27 119 174 -8.419 -0.018 -6.737 -1.728 -2.970 1.755 -2.358 D 43 41 3 44 3 0 23 116 172 -7.012 -1.488 -0.653 IR 44 44 3 44 3 2 27 119 174 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 147 - U - - MR 45 44 3 47 3 3 26 118 173 -8.454 -0.017 -6.772 -1.684 -1.646 -2.427 1.671 D 46 44 3 47 3 0 22 115 170 -6.799 -1.976 -0.440 IR 47 47 3 47 3 2 26 118 173 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 146 - A - - MR 48 47 3 50 3 3 26 117 172 -8.454 -0.017 -6.772 1.761 -2.586 -2.197 -2.150 D 49 47 3 50 3 0 22 115 170 -6.799 -1.429 -0.691 IR 50 50 3 50 3 2 25 117 172 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 145 - u - - MR 51 50 3 53 3 2 25 116 171 -8.479 -0.017 -6.796 0.231 -0.428 -0.693 0.551 D 52 50 3 53 3 0 21 114 169 -6.619 -1.203 -0.848 IR 53 53 3 53 3 2 24 116 171 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 144 - a - - MR 54 53 3 56 3 1 24 115 170 -8.506 -0.070 -4.487 0.662 -0.414 -1.054 0.246 D 55 53 3 56 3 0 20 112 168 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 24 115 170 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 143 - a - - MR 57 56 3 59 3 2 23 114 169 -8.453 -0.043 -5.227 0.966 -0.911 -0.523 -0.290 D 58 56 3 59 3 0 19 111 166 -6.802 -1.980 -0.439 IR 59 59 3 59 3 1 23 114 169 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 142 - u - - MR 60 59 3 62 3 1 22 113 168 -8.428 -0.205 -2.947 0.487 -0.652 -1.047 0.563 D 61 59 3 62 3 0 19 111 166 -6.963 -2.141 -0.386 IR 62 62 3 62 3 1 23 113 168 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 141 - a - - MR 63 62 3 65 3 1 23 112 167 -8.243 -0.090 -4.122 0.472 -0.336 -0.935 0.376 D 64 62 3 65 3 0 18 110 165 -7.736 -2.914 -0.213 IR 65 65 3 65 3 1 23 112 168 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 140 - a - - MR 66 65 3 68 5 1 23 111 166 -1.620 -0.615 -6.740 -6.953 -7.844 0.750 -0.334 -0.917 -0.006 D 67 65 3 68 5 0 18 110 165 -2.022 -0.790 -4.026 -5.457 -3.451 IR 68 68 3 68 5 1 22 111 166 -2.086 -0.469 -7.214 -5.381 -6.487 0.000 0.000 0.000 0.000 [ MATP 23 ] 21 136 u a - - MP 69 68 3 73 6 2 23 110 165 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -3.333 -2.933 -3.354 0.709 -2.839 -4.120 1.520 -3.311 -3.371 2.025 -3.843 -0.763 2.334 -3.514 -0.502 -2.266 ML 70 68 3 73 6 1 19 108 163 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 18 107 162 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 14 104 159 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 20 109 164 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 20 109 164 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 22 135 U A - - MP 75 74 6 79 6 2 22 108 163 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -4.580 -4.413 -4.374 -0.682 -3.237 -4.902 1.098 -3.958 -4.376 -0.480 -4.729 -2.300 3.486 -4.715 -0.904 -3.157 ML 76 74 6 79 6 1 18 106 161 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 18 105 161 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 14 102 157 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 19 107 162 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 19 107 162 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 23 134 C G - - MP 81 80 6 85 6 2 20 106 161 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -4.905 -4.841 -4.533 -1.044 -3.178 -4.898 3.647 -4.023 -4.597 -0.849 -4.817 -2.795 0.298 -4.950 -0.895 -3.425 ML 82 80 6 85 6 1 17 104 159 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 17 104 159 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 14 101 156 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 18 105 160 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 18 105 160 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 24 133 C G - - MP 87 86 6 91 6 2 18 104 159 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -4.905 -4.841 -4.533 -1.044 -3.178 -4.898 3.647 -4.023 -4.597 -0.849 -4.817 -2.795 0.298 -4.950 -0.895 -3.425 ML 88 86 6 91 6 1 16 102 157 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 16 102 157 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 13 99 155 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 17 103 158 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 17 103 158 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 25 132 C G - - MP 93 92 6 97 4 2 16 102 157 -7.121 -7.328 -0.047 -5.742 -4.029 -4.013 -3.821 -0.255 -2.623 -4.306 3.145 -3.385 -3.843 -0.059 -4.184 -2.029 0.982 -4.128 1.199 -2.700 ML 94 92 6 97 4 1 15 101 156 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 14 100 155 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 13 99 154 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 16 102 157 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 16 101 156 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - G - - - ML 99 98 6 101 3 1 14 100 155 -8.125 -0.018 -6.779 -1.922 -3.192 1.790 -2.579 D 100 98 6 101 3 0 13 98 153 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 15 100 155 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - A - - - ML 102 101 3 104 2 1 13 99 154 -8.548 -0.004 1.781 -2.699 -2.298 -2.274 D 103 101 3 104 2 0 12 98 153 -8.445 -0.004 IL 104 104 3 104 2 1 14 99 154 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 30 ] - - - - - - B 105 104 3 106 195 0 12 98 153 [ BEGL 31 ] - - - - - - S 106 105 1 107 4 0 0 63 104 -0.042 -6.923 -6.331 -6.971 [ MATP 32 ] 28 71 a u - - MP 107 106 1 111 6 2 2 63 104 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -2.804 -2.320 -2.947 2.093 -3.127 -3.968 0.694 -3.189 -2.924 1.414 -3.471 0.653 0.454 -3.197 -1.051 1.553 ML 108 106 1 111 6 1 1 61 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 109 106 1 111 6 1 1 61 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 110 106 1 111 6 0 0 58 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 111 111 5 111 6 1 1 62 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 112 112 6 112 5 1 1 62 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 70 A U - - MP 113 112 6 117 6 2 2 61 102 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -3.651 -2.642 -3.741 3.180 -4.434 -5.222 -0.172 -3.895 -3.599 1.254 -4.170 0.899 -0.418 -4.276 -2.066 -2.563 ML 114 112 6 117 6 1 1 59 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 6 117 6 1 1 59 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 6 117 6 0 0 56 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 1 60 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 60 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 69 G C - - MP 119 118 6 123 6 2 2 59 100 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -5.060 -3.247 -5.196 -0.016 -5.680 -4.815 -0.965 -5.456 -4.529 3.706 -4.845 -0.960 -1.342 -4.675 -3.020 -4.068 ML 120 118 6 123 6 1 1 57 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 1 57 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 0 55 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 58 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 58 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 31 68 G C - - MP 125 124 6 129 4 2 2 57 98 -7.121 -7.328 -0.047 -5.742 -5.060 -3.247 -5.196 -0.016 -5.680 -4.815 -0.965 -5.456 -4.529 3.706 -4.845 -0.960 -1.342 -4.675 -3.020 -4.068 ML 126 124 6 129 4 1 1 56 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 4 1 1 55 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 128 124 6 129 4 0 0 54 95 -4.568 -4.250 -2.265 -0.520 IL 129 129 5 129 4 1 1 57 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 130 130 6 130 3 1 1 57 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - A - - - ML 131 130 6 133 3 1 1 55 96 -8.506 -0.050 -5.009 1.522 -1.927 -1.002 -1.453 D 132 130 6 133 3 0 0 53 94 -5.620 -0.734 -1.403 IL 133 133 3 133 3 1 1 55 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 67 - G - - MR 134 133 3 136 3 1 1 54 95 -8.473 -0.017 -6.791 -1.849 -3.110 1.778 -2.497 D 135 133 3 136 3 0 0 52 93 -6.660 -1.151 -0.890 IR 136 136 3 136 3 1 1 54 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 66 - U - - MR 137 136 3 139 3 1 1 53 94 -8.506 -0.017 -6.824 -0.566 -1.033 -1.317 1.284 D 138 136 3 139 3 0 0 51 92 -6.390 -1.568 -0.620 IR 139 139 3 139 3 1 1 53 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 65 - A - - MR 140 139 3 142 3 1 1 52 93 -8.506 -0.017 -6.824 1.648 -2.092 -1.896 -1.464 D 141 139 3 142 3 0 0 50 91 -6.390 -1.568 -0.620 IR 142 142 3 142 3 1 1 52 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 64 - G - - MR 143 142 3 145 5 1 1 51 92 -7.235 -0.035 -7.050 -7.263 -8.154 -0.930 -1.419 1.431 -1.304 D 144 142 3 145 5 0 0 49 90 -5.352 -0.707 -2.978 -4.409 -2.404 IR 145 145 3 145 5 1 1 51 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 33 63 U A - - MP 146 145 3 150 6 2 2 50 91 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -4.580 -4.413 -4.374 -0.682 -3.237 -4.902 1.098 -3.958 -4.376 -0.480 -4.729 -2.300 3.486 -4.715 -0.904 -3.157 ML 147 145 3 150 6 1 1 48 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 3 150 6 1 1 48 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 3 150 6 0 0 44 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 49 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 49 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 34 62 u a - - MP 152 151 6 156 6 2 2 48 89 -9.176 -9.115 -0.035 -6.102 -8.171 -8.566 -3.253 -3.147 -3.297 0.515 -2.598 -4.059 1.807 -3.171 -3.294 0.804 -3.787 -0.586 2.709 -3.474 -0.018 -2.209 ML 153 151 6 156 6 1 1 46 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 46 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 42 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 47 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 47 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 35 61 C G - - MP 158 157 6 162 6 2 2 46 87 -9.161 -9.100 -0.020 -7.877 -8.156 -8.551 -4.432 -4.382 -4.136 -0.584 -2.842 -4.556 3.462 -3.645 -4.175 -0.364 -4.458 -2.352 0.976 -4.493 -0.528 -3.008 ML 159 157 6 162 6 1 1 44 85 -6.444 -6.791 -1.505 -0.832 -6.640 -4.170 0.715 -0.623 -0.333 -0.127 MR 160 157 6 162 6 1 1 43 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 40 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 45 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 45 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 36 60 g c - - MP 164 163 6 168 6 2 2 44 85 -9.161 -9.100 -0.020 -7.877 -8.156 -8.551 -3.578 -2.542 -3.611 2.360 -4.107 -4.533 0.307 -3.888 -3.603 2.700 -4.072 -0.136 0.007 -3.783 -1.644 -2.499 ML 165 163 6 168 6 1 1 42 83 -6.444 -2.887 -1.505 -1.199 -6.640 -4.170 0.251 -0.628 0.326 -0.136 MR 166 163 6 168 6 1 1 41 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 38 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 43 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 43 84 -2.499 -0.461 -6.010 -4.178 -5.284 0.000 0.000 0.000 0.000 [ MATP 45 ] 37 58 c g - - MP 170 169 6 174 4 2 2 42 83 -1.719 -7.328 -1.197 -1.977 -2.986 -2.951 -3.070 0.812 -1.720 -3.872 2.418 -2.984 -3.059 1.005 -3.579 -0.991 1.978 -3.237 0.024 -2.008 ML 171 169 6 174 4 1 1 38 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 4 1 1 36 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 35 76 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 43 83 -0.649 -4.939 -1.626 -7.424 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 52 - u - - - ML 176 175 6 178 3 1 1 19 37 -7.766 -0.024 -6.421 -0.212 -0.237 -0.844 0.792 D 177 175 6 178 3 0 0 17 36 -7.887 -1.485 -0.647 IL 178 178 3 178 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 53 - u - - - ML 179 178 3 181 3 1 1 17 36 -7.913 -0.021 -6.567 0.165 -0.452 -0.643 0.592 D 180 178 3 181 3 0 0 16 35 -7.447 -1.735 -0.527 IL 181 181 3 181 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 54 - a - - - ML 182 181 3 184 3 1 1 16 35 -7.978 -0.020 -6.632 0.490 -0.385 -0.809 0.333 D 183 181 3 184 3 0 0 15 34 -7.175 -0.609 -1.567 IL 184 184 3 184 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 55 - u - - - ML 185 184 3 187 3 1 1 15 33 -8.125 -0.018 -6.779 0.205 -0.660 -0.658 0.661 D 186 184 3 187 3 0 0 15 33 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 56 - u - - - ML 188 187 3 190 3 1 1 13 31 -8.125 -0.018 -6.779 0.087 -0.266 -0.929 0.661 D 189 187 3 190 3 0 0 13 32 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 57 - a - - - ML 191 190 3 193 2 1 1 1 1 * 0.000 0.516 -0.508 -0.542 0.239 D 192 190 3 193 2 0 0 0 0 * 0.000 IL 193 193 3 193 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 194 193 3 -1 0 0 0 0 0 [ BEGR 53 ] - - - - - - S 195 105 1 196 3 0 0 67 122 -8.125 -0.018 -6.779 IL 196 196 2 196 3 1 1 68 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 72 - G - - - ML 197 196 2 199 3 1 1 67 122 -8.125 -0.018 -6.779 -1.922 -3.192 1.790 -2.579 D 198 196 2 199 3 0 0 65 120 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 67 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 73 - U - - - ML 200 199 3 202 3 1 1 66 121 -8.125 -0.018 -6.779 -1.789 -1.733 -2.536 1.695 D 201 199 3 202 3 0 0 64 119 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 66 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 74 - A - - - ML 203 202 3 205 3 1 1 65 120 -8.125 -0.018 -6.779 1.781 -2.699 -2.298 -2.274 D 204 202 3 205 3 0 0 63 118 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 65 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 75 - A - - - ML 206 205 3 208 5 1 1 64 119 -7.235 -0.035 -7.050 -7.263 -8.154 1.781 -2.699 -2.298 -2.274 D 207 205 3 208 5 0 0 62 117 -4.959 -0.803 -4.221 -2.596 -2.508 IL 208 208 3 208 5 1 1 64 119 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 76 131 C G - - MP 209 208 3 213 6 2 2 63 118 -9.176 -9.115 -0.020 -7.892 -8.171 -8.566 -4.905 -4.841 -4.533 -1.044 -3.178 -4.898 3.647 -4.023 -4.597 -0.849 -4.817 -2.795 0.298 -4.950 -0.895 -3.425 ML 210 208 3 213 6 1 1 61 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 211 208 3 213 6 1 1 61 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 212 208 3 213 6 0 0 58 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 213 213 5 213 6 1 1 62 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 214 214 6 214 5 1 1 62 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 77 130 C G - - MP 215 214 6 219 4 2 2 61 116 -4.917 -7.328 -0.086 -5.742 -4.905 -4.841 -4.533 -1.044 -3.178 -4.898 3.647 -4.023 -4.597 -0.849 -4.817 -2.795 0.298 -4.950 -0.895 -3.425 ML 216 214 6 219 4 1 1 60 115 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 217 214 6 219 4 1 1 59 114 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 218 214 6 219 4 0 0 58 113 -4.568 -4.250 -2.265 -0.520 IL 219 219 5 219 4 1 1 61 116 -1.288 -2.837 -1.232 -5.323 0.000 0.000 0.000 0.000 IR 220 220 6 220 3 1 1 60 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 81 - G - - - ML 221 220 6 223 3 1 1 59 114 -8.125 -0.018 -6.779 -0.169 -1.462 1.072 -0.632 D 222 220 6 223 3 0 0 56 111 -6.174 -1.687 -0.566 IL 223 223 3 223 3 1 1 59 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 82 - A - - - ML 224 223 3 226 3 1 1 58 113 -8.125 -0.018 -6.779 1.142 -0.937 -0.787 -0.534 D 225 223 3 226 3 0 0 55 110 -6.174 -1.687 -0.566 IL 226 226 3 226 3 1 1 58 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 83 - A - - - ML 227 226 3 229 3 1 1 57 112 -8.125 -0.080 -4.318 1.218 -1.081 -1.020 -0.497 D 228 226 3 229 3 0 0 53 108 -6.174 -1.687 -0.566 IL 229 229 3 229 3 1 1 57 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 84 - a - - - ML 230 229 3 232 3 1 1 56 111 -1.875 -0.560 -4.347 0.747 -0.936 -1.100 0.414 D 231 229 3 232 3 0 0 49 104 -6.684 -1.375 -0.725 IL 232 232 3 232 3 1 1 58 113 -0.517 -1.796 -6.254 0.000 0.000 0.000 0.000 [ MATL 64 ] 95 - u - - - ML 233 232 3 235 3 1 1 50 105 -8.042 -0.020 -6.696 0.244 0.094 -0.864 0.262 D 234 232 3 235 3 0 0 47 101 -6.833 -1.669 -0.563 IL 235 235 3 235 3 1 1 51 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 96 - U - - - ML 236 235 3 238 3 1 1 49 104 -8.069 -0.019 -6.724 -1.015 -1.157 -1.497 1.434 D 237 235 3 238 3 0 0 44 99 -6.652 -2.165 -0.382 IL 238 238 3 238 3 1 1 50 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 97 - A - - - ML 239 238 3 241 3 1 1 48 103 -2.279 -0.548 -3.182 1.386 -1.296 -1.049 -1.010 D 240 238 3 241 3 0 0 38 93 -6.652 -2.165 -0.382 IL 241 241 3 241 3 1 1 52 106 -0.489 -1.873 -6.127 0.000 0.000 0.000 0.000 [ MATL 67 ] 126 - u - - - ML 242 241 3 244 3 1 1 16 35 -7.916 -0.021 -6.570 0.248 -0.760 -0.838 0.733 D 243 241 3 244 3 0 0 15 34 -7.434 -0.994 -1.023 IL 244 244 3 244 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 127 - a - - - ML 245 244 3 247 3 1 1 15 33 -8.053 -0.019 -6.708 0.569 -0.686 -0.723 0.367 D 246 244 3 247 3 0 0 14 33 -6.762 -0.886 -1.154 IL 247 247 3 247 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 128 - u - - - ML 248 247 3 250 3 1 1 13 31 -8.125 -0.018 -6.779 0.467 -0.857 -0.857 0.598 D 249 247 3 250 3 0 0 13 32 -6.174 -1.687 -0.566 IL 250 250 3 250 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 129 - a - - - ML 251 250 3 253 2 1 1 1 1 * 0.000 0.875 -0.976 -0.922 0.176 D 252 250 3 253 2 0 0 0 0 * 0.000 IL 253 253 3 253 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 254 253 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SAM-III ACC RF01767 DESC SAM-III riboswitch aptamer (SMK box) LENG 82 MAXL 183 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 16:27:20 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/SO_sanity_check/RF01767/CM NSEQ 25 EFFN 3.414917 CKSUM 3560452150 STATS LOCAL MSV -8.6945 0.71884 STATS LOCAL VITERBI -9.7793 0.71884 STATS LOCAL FORWARD -3.5789 0.71884 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23854 1.63748 1.35125 1.35943 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 0.00000 * 1 1.34781 1.96494 1.49047 0.98147 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.06652 4.16494 3.01953 1.46634 0.26236 1.09861 0.40547 2 0.94967 1.94971 2.22170 1.01503 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13108 4.13108 1.46634 0.26236 1.63778 0.21618 3 1.41775 1.47858 1.61873 1.10373 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.03266 4.13108 4.13108 1.46634 0.26236 0.49237 0.94463 4 1.18803 1.35993 1.58740 1.45225 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 5 2.73455 3.50588 0.16703 2.83225 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 6 2.15717 2.32498 2.10358 0.40865 6 U - - : 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 7 3.04552 2.93765 3.57698 0.13756 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.13342 4.16494 2.21301 1.46634 0.26236 1.09861 0.40547 8 0.88280 2.15660 1.41138 1.48346 8 a - - : 1.38629 1.38629 1.38629 1.38629 0.03488 4.06640 4.06640 1.46634 0.26236 1.34671 0.30123 9 1.90783 0.63278 2.64182 1.38929 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.12586 2.28763 4.08931 0.67793 0.70860 0.30119 1.34683 10 0.28143 2.79098 2.42438 2.34966 13 A - - : 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 11 0.09527 3.69488 3.37701 3.44594 14 A - - : 1.38629 1.38629 1.38629 1.38629 0.43635 4.16494 1.08449 1.46634 0.26236 1.09861 0.40547 12 1.30594 1.80987 1.35343 1.18074 15 u - - : 1.38629 1.38629 1.38629 1.38629 0.77980 0.73848 2.75415 0.93433 0.49898 0.62543 0.76579 13 0.98976 2.37594 0.92800 1.96565 20 g - - : 1.38629 1.38629 1.38629 1.38629 0.03806 3.98081 3.98081 1.46634 0.26236 0.15622 1.93359 14 2.20484 1.74339 1.19907 0.88351 21 u - - ( 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 15 3.45968 2.32925 3.29935 0.18118 22 U - - ( 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 16 3.62484 0.15226 3.47700 2.48075 23 C - - ( 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 17 3.64008 0.15120 3.48533 2.48373 24 C - - ( 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 18 3.00212 0.47824 2.80323 1.30997 25 C - - ( 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 19 3.15290 4.08489 0.08935 3.65277 26 G - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 20 0.09527 3.69488 3.37701 3.44594 27 A - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 21 1.10270 2.55811 1.38288 1.07963 28 u - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 22 0.40006 3.22400 1.42560 3.00463 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 23 2.88628 3.69299 0.11330 3.63285 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 24 2.88462 3.69067 0.11357 3.62970 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 25 0.26267 2.99663 2.16870 2.70715 32 A - - - 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 26 3.52592 2.33596 3.33411 0.17648 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 27 2.34263 1.49310 1.94448 0.62327 34 U - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 28 3.09117 0.28375 3.00170 1.88456 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 29 0.96455 2.69250 0.74906 2.54692 36 g - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 30 2.04948 0.98209 1.83332 1.08830 37 c - - < 1.38629 1.38629 1.38629 1.38629 0.95653 1.07249 1.29600 1.22050 0.34968 1.09861 0.40547 31 1.59472 1.55156 2.02697 0.79102 52 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04277 3.86641 3.86641 1.46634 0.26236 0.99173 0.46352 32 1.27145 1.72625 1.85356 0.95465 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03771 3.98987 3.98987 1.46634 0.26236 1.19896 0.35883 33 1.01851 1.66570 2.00054 1.15662 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03567 4.04428 4.04428 1.46634 0.26236 0.21545 1.64081 34 1.23903 1.90563 1.86532 0.89953 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 35 1.33184 1.57316 2.08670 0.90504 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 36 1.00408 1.76376 1.78157 1.22470 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 37 1.23702 1.99403 0.87518 1.85265 58 g - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 38 2.79294 0.84487 2.50749 0.84939 60 c - - > 1.38629 1.38629 1.38629 1.38629 0.06049 4.16494 3.14280 1.46634 0.26236 1.09861 0.40547 39 2.11735 3.19814 0.23696 2.99997 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03247 4.13692 4.13692 1.46634 0.26236 0.54212 0.87111 40 0.73303 2.24686 1.28729 1.98193 62 a - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 41 0.19887 3.53877 2.17380 3.28215 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 42 2.30041 2.49453 0.29691 2.60188 64 G - - - 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 43 0.17781 3.13004 3.00518 2.66424 65 A - - - 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 44 1.91852 2.28858 2.45819 0.40620 66 U - - - 1.38629 1.38629 1.38629 1.38629 0.06049 4.16494 3.14280 1.46634 0.26236 1.09861 0.40547 45 3.10078 4.02730 0.09458 3.59695 67 G - - - 1.38629 1.38629 1.38629 1.38629 0.03247 4.13692 4.13692 1.46634 0.26236 0.54212 0.87111 46 3.79845 0.13685 3.53232 2.57367 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 47 3.79636 0.13697 3.53130 2.57328 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 48 3.19675 2.12596 3.00674 0.23530 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 49 2.58372 1.92329 2.35124 0.38107 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 50 3.15290 4.08489 0.08935 3.65277 72 G - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 51 3.04552 2.93765 3.57698 0.13756 73 U - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 52 0.09527 3.69488 3.37701 3.44594 74 A - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 53 0.09527 3.69488 3.37701 3.44594 75 A - - , 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 54 3.69470 0.14755 3.51470 2.49413 76 C - - < 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 55 3.68732 0.14803 3.51078 2.49275 77 C - - < 1.38629 1.38629 1.38629 1.38629 0.06125 3.12624 4.16494 1.20292 0.35713 1.09861 0.40547 56 1.58308 2.57573 0.55215 1.94595 81 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 57 0.52685 2.10610 2.01088 1.87109 82 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 58 0.47272 2.23506 2.21332 1.83027 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08246 4.16494 2.75487 1.46634 0.26236 1.09861 0.40547 59 0.81922 2.15106 2.26787 1.08078 84 a - - _ 1.38629 1.38629 1.38629 1.38629 0.50435 1.09913 2.76552 1.59763 0.22612 0.79811 0.59817 60 1.21478 1.27787 2.04372 1.22062 95 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09733 4.09733 1.46634 0.26236 1.12024 0.39482 61 2.35642 2.41270 2.62287 0.29696 96 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03304 4.11954 4.11954 1.46634 0.26236 1.76780 0.18718 62 0.35376 2.40261 2.23214 2.30079 97 A - - _ 1.38629 1.38629 1.38629 1.38629 0.49715 1.36104 1.99992 1.75494 0.18985 1.76780 0.18718 63 1.21039 2.00253 2.02818 0.83160 126 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 0.56163 0.84462 64 0.95886 1.92096 1.93088 1.12336 127 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03349 4.10632 4.10632 1.46634 0.26236 0.35670 1.20391 65 1.03524 2.08227 2.04251 0.94031 128 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 66 0.72555 2.17446 2.11152 1.26862 129 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 67 2.77314 3.67285 0.12756 3.44540 130 G - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 68 2.77331 3.67311 0.12753 3.44570 131 G - - > 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 69 2.15786 2.96293 0.26165 2.76494 132 G - - ) 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 70 2.75642 3.64673 0.13061 3.41602 133 G - - ) 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 71 2.75117 3.63858 0.13158 3.40687 134 G - - ) 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 72 0.20445 3.48866 2.16533 3.22756 135 A - - ) 1.38629 1.38629 1.38629 1.38629 0.03155 4.16494 4.16494 1.46634 0.26236 1.09861 0.40547 73 0.97042 1.29027 1.57845 1.96908 136 a - - ) 1.38629 1.38629 1.38629 1.38629 0.71480 1.03355 1.86452 0.44748 1.01953 1.09861 0.40547 74 0.81511 1.61679 2.11332 1.43533 140 a - - : 1.38629 1.38629 1.38629 1.38629 0.15861 4.01477 2.05089 1.46634 0.26236 1.46173 0.26375 75 1.03119 1.62426 2.11094 1.12320 141 a - - : 1.38629 1.38629 1.38629 1.38629 0.03996 3.93301 3.93301 1.46634 0.26236 0.47853 0.96677 76 1.01790 1.89957 2.20584 0.97060 142 u - - : 1.38629 1.38629 1.38629 1.38629 0.03380 4.09733 4.09733 1.46634 0.26236 1.12024 0.39482 77 0.66081 2.09039 1.78363 1.65077 143 A - - : 1.38629 1.38629 1.38629 1.38629 0.03304 4.11954 4.11954 1.46634 0.26236 0.41766 1.07465 78 0.88463 1.68876 2.21666 1.22618 144 a - - : 1.38629 1.38629 1.38629 1.38629 0.05572 4.16494 3.25273 1.46634 0.26236 1.09861 0.40547 79 1.21879 1.70662 1.89266 0.98815 145 u - - : 1.38629 1.38629 1.38629 1.38629 0.05488 4.14153 3.28322 1.46634 0.26236 1.50181 0.25196 80 0.10445 3.60772 3.29734 3.34994 146 A - - : 1.38629 1.38629 1.38629 1.38629 0.03304 4.11969 4.11969 1.46634 0.26236 1.76627 0.18750 81 2.96107 2.86672 3.49030 0.14982 147 U - - : 1.38629 1.38629 1.38629 1.38629 0.06418 4.11969 3.08098 1.46634 0.26236 1.76627 0.18750 82 3.01136 3.92805 0.10436 3.50014 148 G - - : 1.38629 1.38629 1.38629 1.38629 0.01718 4.07268 * 1.46634 0.26236 0.00000 * //