INFERNAL1/a [1.1.5 | Sep 2023] NAME whalefall-1 ACC RF01762 DESC Whalefall-1 RNA STATES 177 NODES 46 CLEN 56 W 70 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 19:52:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01762/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 14 EFFN 4.098145 CKSUM 1860200308 NULL 0.000 0.000 0.000 0.000 GA 37.00 TC 37.00 NC 36.90 EFP7GF -14.3438 0.71925 ECMLC 0.74328 -5.93112 2.07373 1600000 460436 0.002606 ECMGC 0.39178 -20.49043 -5.62094 1600000 135543 0.002951 ECMLI 0.74063 -4.54337 2.97988 1600000 315541 0.003803 ECMGI 0.44073 -15.32677 -2.74465 1600000 102421 0.003905 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 70 89 -7.640 -7.847 -0.033 -6.261 IL 1 1 2 1 4 1 16 75 94 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 15 74 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 15 70 89 -8.617 -0.013 -7.271 -0.279 -1.630 1.099 -0.492 D 4 2 3 5 3 0 10 69 88 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 15 73 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 14 69 88 -8.617 -0.013 -7.271 -1.679 -0.653 -2.441 1.520 D 7 5 3 8 3 0 10 68 87 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 14 72 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 13 68 87 -8.972 -0.012 -7.290 1.187 -2.101 0.208 -1.582 D 10 8 3 11 3 0 9 67 86 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 13 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 57 - C - - MR 12 11 3 14 3 1 13 67 86 -8.972 -0.012 -7.290 -1.702 1.373 -2.602 -0.093 D 13 11 3 14 3 0 7 66 84 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 12 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 56 - A - - MR 15 14 3 17 3 1 12 66 85 -8.972 -0.012 -7.290 1.711 -2.672 -1.440 -2.309 D 16 14 3 17 3 0 7 65 83 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 11 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 55 - G - - MR 18 17 3 20 3 1 11 65 84 -8.972 -0.012 -7.290 -2.865 -4.241 1.898 -3.602 D 19 17 3 20 3 0 6 64 82 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 10 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 54 - G - - MR 21 20 3 23 3 1 10 64 83 -8.972 -0.012 -7.290 -2.865 -4.241 1.898 -3.602 D 22 20 3 23 3 0 5 63 81 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 9 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 53 - A - - MR 24 23 3 26 3 1 9 63 82 -8.972 -0.012 -7.290 1.892 -3.666 -3.181 -3.339 D 25 23 3 26 3 0 5 62 80 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 8 64 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 52 - G - - MR 27 26 3 29 3 1 8 62 81 -8.972 -0.012 -7.290 -1.419 -3.273 1.753 -2.724 D 28 26 3 29 3 0 4 60 79 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 8 63 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 51 - u - - MR 30 29 3 32 3 1 7 61 80 -8.972 -0.012 -7.290 -0.427 -1.170 0.039 0.836 D 31 29 3 32 3 0 4 59 78 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 7 62 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 50 - G - - MR 33 32 3 35 3 1 6 60 79 -8.972 -0.012 -7.290 -2.865 -4.241 1.898 -3.602 D 34 32 3 35 3 0 3 59 77 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 6 61 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 49 - g - - MR 36 35 3 38 3 1 5 59 78 -8.972 -0.012 -7.290 0.609 -2.132 0.936 -1.583 D 37 35 3 38 3 0 3 58 76 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 5 60 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 48 - G - - MR 39 38 3 41 3 1 4 58 77 -8.972 -0.167 -3.220 -2.865 -4.241 1.898 -3.602 D 40 38 3 41 3 0 2 57 76 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 4 59 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 47 - A - - MR 42 41 3 44 2 1 3 57 76 -8.930 -0.003 1.576 -1.951 -1.929 -1.008 D 43 41 3 44 2 0 2 56 75 -5.663 -0.029 IR 44 44 3 44 2 1 3 58 77 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 15 ] - - - - - - B 45 44 3 46 102 0 2 56 75 [ BEGL 16 ] - - - - - - S 46 45 1 47 4 0 0 31 49 -0.034 -7.224 -6.632 -7.272 [ MATP 17 ] 4 22 U A - - MP 47 46 1 51 6 2 2 31 49 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -4.691 -4.677 -4.394 -0.837 -3.069 -4.818 1.974 -3.866 -4.416 -0.673 -4.719 -2.644 3.255 -4.748 -0.732 -3.241 ML 48 46 1 51 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 49 46 1 51 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 50 46 1 51 6 0 0 27 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 51 51 5 51 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 5 21 C G - - MP 53 52 6 57 6 2 2 29 47 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -6.002 -6.030 -5.425 -2.199 -3.902 -5.644 3.831 -4.864 -5.566 -2.098 -5.626 -4.047 -0.586 -5.970 -1.688 -4.373 ML 54 52 6 57 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 6 57 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 6 20 u a - - MP 59 58 6 63 6 2 2 27 45 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -4.484 -4.441 -4.266 -0.567 -3.014 -4.763 2.692 -3.781 -4.267 -0.391 -4.614 -2.358 2.732 -4.578 -0.660 -3.091 ML 60 58 6 63 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 61 58 6 63 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 7 19 C G - - MP 65 64 6 69 6 2 2 25 43 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -6.002 -6.030 -5.425 -2.199 -3.902 -5.644 3.831 -4.864 -5.566 -2.098 -5.626 -4.047 -0.586 -5.970 -1.688 -4.373 ML 66 64 6 69 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 67 64 6 69 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 68 64 6 69 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 69 69 5 69 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 70 70 6 70 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 8 18 u a - - MP 71 70 6 75 6 2 2 23 41 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -4.487 -4.444 -4.268 -0.573 -3.015 -4.764 2.658 -3.783 -4.269 -0.397 -4.615 -2.364 2.766 -4.580 -0.662 -3.094 ML 72 70 6 75 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 73 70 6 75 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 74 70 6 75 6 0 0 19 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 75 75 5 75 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 76 76 6 76 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 9 17 C G - - MP 77 76 6 81 6 2 2 21 39 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -6.277 -6.262 -5.877 -2.557 -4.609 -6.185 3.875 -5.669 -6.108 -2.412 -2.420 -4.295 -1.346 -6.403 -2.609 -4.982 ML 78 76 6 81 6 1 1 20 38 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 79 76 6 81 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 6 81 6 0 0 18 36 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 20 38 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 10 16 C G - - MP 83 82 6 87 4 2 2 19 37 -7.640 -4.210 -0.108 -6.261 -6.002 -6.030 -5.425 -2.199 -3.902 -5.644 3.831 -4.864 -5.566 -2.098 -5.626 -4.047 -0.586 -5.970 -1.688 -4.373 ML 84 82 6 87 4 1 1 19 37 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 4 1 1 19 37 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 86 82 6 87 4 0 0 18 36 -4.568 -4.250 -2.265 -0.520 IL 87 87 5 87 4 1 1 21 38 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 88 88 6 88 3 1 1 19 37 -1.672 -0.649 -4.372 0.000 0.000 0.000 0.000 [ MATL 24 ] 11 - U - - - ML 89 88 6 91 3 1 1 16 34 -8.617 -0.013 -7.271 -1.042 -1.674 -2.319 1.585 D 90 88 6 91 3 0 0 16 34 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 12 - u - - - ML 92 91 3 94 3 1 1 14 33 -8.617 -0.013 -7.271 -0.327 0.385 -1.562 0.640 D 93 91 3 94 3 0 0 15 33 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 13 - G - - - ML 95 94 3 97 3 1 1 13 31 -8.617 -0.013 -7.271 -1.487 -2.400 1.557 -0.964 D 96 94 3 97 3 0 0 13 32 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 14 - G - - - ML 98 97 3 100 2 1 1 1 1 * 0.000 -0.620 -2.733 1.576 -2.200 D 99 97 3 100 2 0 0 0 0 * 0.000 IL 100 100 3 100 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 28 ] - - - - - - E 101 100 3 -1 0 0 0 0 0 [ BEGR 29 ] - - - - - - S 102 45 1 103 3 0 0 37 56 -8.617 -0.013 -7.271 IL 103 103 2 103 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 23 - C - - - ML 104 103 2 106 3 1 1 37 56 -8.617 -0.013 -7.271 -1.926 1.510 -2.822 -0.421 D 105 103 2 106 3 0 0 36 55 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 24 - A - - - ML 107 106 3 109 5 1 1 36 55 -7.678 -0.026 -7.493 -7.705 -8.597 1.375 -0.549 -1.771 -1.217 D 108 106 3 109 5 0 0 35 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 109 109 3 109 5 1 1 36 55 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 46 G C - - MP 110 109 3 114 6 2 2 35 54 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -5.984 -3.707 -6.324 -0.687 -6.941 -5.152 -2.000 -6.569 -5.052 3.834 -5.321 -1.479 -2.362 -5.254 -4.125 -5.185 ML 111 109 3 114 6 1 1 34 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 3 114 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 3 114 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 35 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 45 A U - - MP 116 115 6 120 6 2 2 33 52 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -5.385 -4.588 -4.908 3.807 -5.708 -6.787 -1.619 -1.553 -5.345 -0.954 -5.901 -2.082 -2.014 -5.998 -3.482 -4.067 ML 117 115 6 120 6 1 1 32 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 33 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 44 g c - - MP 122 121 6 126 6 2 2 31 50 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -3.571 -2.665 -3.542 1.950 -3.835 -4.284 0.605 -3.896 -3.728 2.675 -4.133 -0.376 1.112 -3.557 -1.367 -2.506 ML 123 121 6 126 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 43 u a - - MP 128 127 6 132 6 2 2 29 48 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -3.100 -3.050 -3.187 1.959 -2.661 -3.979 1.519 -3.181 -3.203 0.724 -3.717 -1.147 2.150 -3.352 0.606 -2.187 ML 129 127 6 132 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 29 42 c g - - MP 134 133 6 138 6 2 2 27 46 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -4.092 -4.046 -3.994 -0.221 -2.914 -4.604 2.528 -3.623 -3.979 -0.051 -4.393 -1.980 2.515 -4.249 0.765 -2.835 ML 135 133 6 138 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 6 138 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 30 41 c g - - MP 140 139 6 144 6 2 2 25 44 -9.412 -9.351 -0.053 -8.128 -5.208 -8.803 -2.989 -2.992 -3.098 1.368 -2.557 -3.913 2.553 -1.197 -3.098 0.693 -3.629 -1.116 1.632 -3.259 -0.330 -2.087 ML 141 139 6 144 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 31 40 a u - - MP 146 145 6 150 6 2 2 23 42 -9.377 -9.316 -0.017 -8.093 -8.372 -8.767 -1.009 -1.831 -0.292 1.679 -1.812 -2.676 1.345 -2.172 -1.894 0.932 -0.930 -0.499 1.456 -1.966 0.166 -1.091 ML 147 145 6 150 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 22 41 -7.414 -6.143 -1.008 -6.121 -1.255 -4.335 -0.114 -0.458 -0.726 0.802 D 149 145 6 150 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 32 39 c g - - MP 152 151 6 156 6 2 2 21 40 -9.412 -9.351 -0.017 -8.128 -8.408 -8.803 -3.634 -3.505 -3.649 1.599 -2.828 -4.396 2.714 -3.435 -3.627 0.516 -4.108 -1.412 1.573 -3.843 -0.478 -2.511 ML 153 151 6 156 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 21 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 33 38 g c - - MP 158 157 6 162 4 2 2 19 38 -7.640 -7.847 -0.033 -6.261 -3.651 -2.595 -3.583 1.616 -4.129 -4.272 0.411 -4.049 -3.836 2.894 -4.198 0.191 0.860 -3.541 -1.560 -2.553 ML 159 157 6 162 4 1 1 20 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 161 157 6 162 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 162 162 5 162 4 1 1 22 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 163 163 6 163 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 34 - C - - - ML 164 163 6 166 3 1 1 16 34 -8.617 -0.013 -7.271 -0.733 1.456 -2.450 -1.084 D 165 163 6 166 3 0 0 16 34 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 35 - u - - - ML 167 166 3 169 3 1 1 14 33 -8.617 -0.013 -7.271 -0.003 -0.519 -0.969 0.843 D 168 166 3 169 3 0 0 15 33 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 36 - U - - - ML 170 169 3 172 3 1 1 13 31 -8.617 -0.175 -3.160 -2.721 -2.515 -3.495 1.842 D 171 169 3 172 3 0 0 13 32 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 37 - G - - - ML 173 172 3 175 2 1 1 1 1 * 0.000 -2.576 -3.924 1.874 -3.299 D 174 172 3 175 2 0 0 0 0 * 0.000 IL 175 175 3 175 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 176 175 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME whalefall-1 ACC RF01762 DESC Whalefall-1 RNA LENG 56 MAXL 125 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 19:52:58 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01762/CM NSEQ 14 EFFN 7.898926 CKSUM 1860200308 STATS LOCAL MSV -7.5529 0.71925 STATS LOCAL VITERBI -8.2939 0.71925 STATS LOCAL FORWARD -3.6911 0.71925 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.53428 1.47803 1.07321 1.53993 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 0.00000 * 1 1.71907 2.93672 0.49200 1.85580 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 2 3.19711 1.92063 3.72672 0.23758 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 3 0.47058 3.57993 1.16842 3.30709 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 4 3.92808 1.52257 3.76184 0.30256 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 5 4.87867 0.04445 4.81824 3.58309 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 6 3.66066 0.84105 3.46325 0.67002 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 7 4.84792 0.04505 4.79875 3.57662 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 8 3.66189 0.87153 3.46828 0.64467 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 9 4.98229 0.04983 3.84224 3.89683 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 10 4.82931 0.04543 4.78685 3.57263 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 11 2.33615 3.08000 3.60623 0.18610 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 12 1.73654 1.01137 2.84565 0.91117 12 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 13 3.01145 3.69030 0.21154 2.15002 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 14 1.93278 3.85788 0.21750 3.51960 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.07584 2.73907 4.77943 0.24234 1.53615 1.09861 0.40547 15 3.83456 4.93284 0.03904 4.65913 16 G - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 16 4.12191 5.08603 0.03073 4.84556 17 G - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 17 0.68500 3.62873 0.82883 3.41729 18 A - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 18 3.83737 4.93800 0.03889 4.66461 19 G - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 19 0.71176 3.62105 0.79976 3.41044 20 a - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 20 3.83448 4.93268 0.03905 4.65896 21 G - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 21 0.33028 3.89428 1.44844 3.65016 22 A - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 22 3.37725 0.24032 4.02455 1.82255 23 C - - - 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 23 0.32350 1.74042 3.17434 2.82821 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 24 3.64313 4.68683 0.04570 4.67904 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 25 0.06842 3.43841 3.70733 4.65930 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 26 1.22089 2.70211 0.74699 1.80679 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 27 1.11849 1.98653 2.52559 0.78516 28 u - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 28 3.31368 0.96231 3.08797 0.62360 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 29 1.65583 0.75468 2.30272 1.43164 30 c - - < 1.38629 1.38629 1.38629 1.38629 0.07414 4.77943 2.76371 1.46634 0.26236 1.09861 0.40547 30 1.05214 1.74984 1.61283 1.28127 31 a - - < 1.38629 1.38629 1.38629 1.38629 0.01793 4.72322 4.72322 1.46634 0.26236 0.23622 1.55878 31 1.47364 0.73480 2.58396 1.53324 32 c - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 32 1.52432 2.75159 0.54843 1.96221 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 33 2.06643 0.23898 3.82598 2.74675 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 34 1.40829 1.81801 2.15474 0.73991 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 35 4.09225 3.85070 4.64325 0.04876 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.15292 4.77943 2.01440 1.46634 0.26236 1.09861 0.40547 36 3.93098 4.94044 0.03930 4.44296 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01939 4.64590 4.64590 1.46634 0.26236 0.11863 2.19051 37 2.08155 0.66662 2.55196 1.25916 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 38 1.66808 2.74290 0.68902 1.40673 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 39 1.45627 1.96800 1.15684 1.16257 40 g - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 40 1.58369 2.48062 0.75720 1.41835 41 g - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 41 0.86207 3.25817 0.70729 3.07305 42 g - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 42 1.06103 2.70469 1.40995 1.07045 43 a - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 43 1.91570 0.81496 2.51660 1.11057 44 c - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 44 4.90203 4.11719 4.59443 0.03442 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 45 4.77309 0.05717 4.56963 3.30358 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.15292 4.77943 2.01440 1.46634 0.26236 1.09861 0.40547 46 0.19432 3.24003 3.28147 2.30387 47 A - - : 1.38629 1.38629 1.38629 1.38629 0.01939 4.64590 4.64590 1.46634 0.26236 0.11863 2.19051 47 4.10889 5.14033 0.03268 4.61849 48 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 48 0.90770 3.52984 0.64062 3.21207 49 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 49 4.10889 5.14033 0.03268 4.61849 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 50 1.89481 2.52753 1.27642 0.71180 51 u - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 51 2.61674 4.28773 0.11294 3.91117 52 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 52 0.03187 4.76459 4.38545 4.56741 53 A - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 53 4.10889 5.14033 0.03268 4.61849 54 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 54 4.10889 5.14033 0.03268 4.61849 55 G - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 55 0.13361 3.86800 2.52805 3.71490 56 A - - : 1.38629 1.38629 1.38629 1.38629 0.01694 4.77943 4.77943 1.46634 0.26236 1.09861 0.40547 56 3.18052 0.32672 3.85412 1.53268 57 C - - : 1.38629 1.38629 1.38629 1.38629 0.00851 4.77099 * 1.46634 0.26236 0.00000 * //