INFERNAL1/a [1.1.4 | Dec 2020] NAME 6S-Flavo ACC RF01685 DESC 6S-Flavo RNA STATES 331 NODES 94 CLEN 109 W 153 ALPH RNA RF no CONS yes MAP yes DATE Mon Apr 14 16:08:54 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 82 EFFN 2.109558 CKSUM 2392151758 NULL 0.000 0.000 0.000 0.000 GA 85.00 TC 85.30 NC 84.70 EFP7GF -6.6105 0.71827 ECMLC 0.51493 -7.70136 3.25247 1600000 337906 0.003551 ECMGC 0.37402 -12.58729 -1.95793 1600000 21313 0.018768 ECMLI 0.51543 -3.24261 7.01914 1600000 237828 0.005046 ECMGI 0.41995 -5.21594 4.27090 1600000 21492 0.018612 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 153 208 -7.020 -7.227 -0.051 -5.641 IL 1 1 2 1 4 21 59 155 211 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 20 59 155 210 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 20 58 153 208 -8.031 -0.020 -6.685 1.747 -2.507 -2.126 -2.063 D 4 2 3 5 3 16 54 151 206 -6.174 -1.687 -0.566 IL 5 5 3 5 3 20 58 154 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 19 57 152 207 -8.031 -0.020 -6.685 -1.905 1.666 -2.733 -1.286 D 7 5 3 8 3 15 53 150 205 -6.174 -1.687 -0.566 IL 8 8 3 8 3 19 57 153 208 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 19 56 151 206 -8.031 -0.020 -6.685 -1.611 -1.585 -2.350 1.652 D 10 8 3 11 3 15 53 149 204 -6.174 -1.687 -0.566 IL 11 11 3 11 3 18 56 152 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 18 55 150 205 -8.031 -0.020 -6.685 -1.647 1.572 -2.476 -0.921 D 13 11 3 14 3 14 52 148 203 -6.174 -1.687 -0.566 IL 14 14 3 14 3 17 55 151 206 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 17 54 149 204 -8.031 -0.020 -6.685 1.747 -2.507 -2.126 -2.063 D 16 14 3 17 3 13 51 147 202 -6.174 -1.687 -0.566 IL 17 17 3 17 3 17 55 150 205 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 16 54 148 203 -8.031 -0.020 -6.685 1.747 -2.507 -2.126 -2.063 D 19 17 3 20 3 13 51 146 201 -6.174 -1.687 -0.566 IL 20 20 3 20 3 16 54 149 204 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 15 53 147 202 -8.031 -0.266 -2.604 -1.905 1.666 -2.733 -1.286 D 22 20 3 23 3 12 50 145 200 -6.174 -1.687 -0.566 IL 23 23 3 23 3 16 53 148 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 24 23 3 26 3 15 52 146 202 -7.789 -0.023 -6.443 0.785 -1.238 0.282 -0.651 D 25 23 3 26 3 12 49 144 199 -7.495 -3.008 -0.201 IL 26 26 3 26 3 15 53 147 202 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - c - - - ML 27 26 3 29 3 14 51 145 201 -3.755 -0.129 -6.443 0.015 0.537 -0.873 -0.011 D 28 26 3 29 3 12 49 144 199 -7.495 -0.466 -1.887 IL 29 29 3 29 3 14 51 146 201 -1.635 -0.670 -4.335 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - u - - - ML 30 29 3 32 3 13 50 144 200 -8.031 -0.020 -6.685 -0.352 -0.918 0.151 0.657 D 31 29 3 32 3 10 47 142 197 -6.174 -1.687 -0.566 IL 32 32 3 32 3 13 50 145 200 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - A - - - ML 33 32 3 35 3 13 50 143 199 -3.132 -0.281 -3.995 1.312 -1.130 -1.307 -0.607 D 34 32 3 35 3 9 47 141 196 -6.174 -1.687 -0.566 IL 35 35 3 35 3 13 50 143 199 -1.784 -0.588 -4.485 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - a - - - ML 36 35 3 38 3 12 49 142 198 -7.953 -0.021 -6.607 0.751 -0.634 -0.427 -0.107 D 37 35 3 38 3 9 46 140 196 -6.772 -0.877 -1.163 IL 38 38 3 38 3 12 49 143 198 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - U - - - ML 39 38 3 41 3 11 48 141 197 -8.031 -0.020 -6.685 -0.776 -0.674 -1.594 1.297 D 40 38 3 41 3 8 45 139 194 -6.174 -1.687 -0.566 IL 41 41 3 41 3 11 48 142 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - U - - - ML 42 41 3 44 3 10 47 140 196 -8.031 -0.020 -6.685 -0.054 -0.730 -1.240 1.008 D 43 41 3 44 3 7 44 138 194 -6.174 -1.687 -0.566 IL 44 44 3 44 3 10 47 141 196 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - u - - - ML 45 44 3 47 3 9 46 139 195 -8.031 -0.342 -2.269 0.041 -0.488 -1.151 0.854 D 46 44 3 47 3 7 44 137 193 -6.174 -1.687 -0.566 IL 47 47 3 47 3 10 47 140 195 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - u - - - ML 48 47 3 50 3 10 46 138 194 -7.713 -0.025 -6.368 0.204 -0.439 -0.859 0.641 D 49 47 3 50 3 6 43 137 192 -7.718 -0.537 -1.708 IL 50 50 3 50 3 9 46 139 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - u - - - ML 51 50 3 53 3 10 45 137 193 -2.703 -0.258 -6.653 0.401 -0.739 -1.065 0.680 D 52 50 3 53 3 5 41 135 191 -6.457 -1.207 -0.848 IL 53 53 3 53 3 9 45 137 193 -1.881 -0.542 -4.581 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - U - - - ML 54 53 3 56 3 9 44 136 192 -8.031 -0.020 -6.685 -1.611 -1.585 -2.350 1.652 D 55 53 3 56 3 4 40 134 189 -6.174 -1.687 -0.566 IL 56 56 3 56 3 8 44 137 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - U - - - ML 57 56 3 59 3 9 43 135 191 -8.031 -0.020 -6.685 -0.928 -1.200 -1.805 1.461 D 58 56 3 59 3 3 39 133 188 -6.174 -1.687 -0.566 IL 59 59 3 59 3 7 43 136 191 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - A - - - ML 60 59 3 62 3 8 42 134 190 -8.031 -0.020 -6.685 1.297 -0.967 -1.108 -0.818 D 61 59 3 62 3 3 38 132 187 -6.174 -1.687 -0.566 IL 62 62 3 62 3 7 42 135 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - a - - - ML 63 62 3 65 3 7 41 133 189 -8.031 -0.020 -6.685 0.836 -0.928 -0.783 0.149 D 64 62 3 65 3 2 37 131 186 -6.174 -1.687 -0.566 IL 65 65 3 65 3 6 41 134 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - A - - - ML 66 65 3 68 3 7 40 132 188 -8.031 -0.020 -6.685 1.134 -1.493 -0.107 -0.941 D 67 65 3 68 3 2 37 130 186 -6.174 -1.687 -0.566 IL 68 68 3 68 3 6 40 133 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - A - - - ML 69 68 3 71 3 6 39 131 187 -8.417 -0.018 -6.735 1.747 -2.507 -2.126 -2.063 D 70 68 3 71 3 2 36 129 185 -5.620 -0.734 -1.403 IL 71 71 3 71 3 5 39 131 187 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 148 - U - - MR 72 71 3 74 3 5 38 130 186 -8.417 -0.018 -6.735 -1.379 -1.252 -2.115 1.568 D 73 71 3 74 3 1 34 128 183 -6.390 -1.568 -0.620 IR 74 74 3 74 3 4 38 130 186 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 147 - U - - MR 75 74 3 77 3 5 37 129 185 -8.417 -0.018 -6.735 -1.611 -1.585 -2.350 1.652 D 76 74 3 77 3 1 34 127 182 -6.390 -1.568 -0.620 IR 77 77 3 77 3 4 37 129 185 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 146 - U - - MR 78 77 3 80 3 4 37 128 184 -8.417 -0.018 -6.735 -1.611 -1.585 -2.350 1.652 D 79 77 3 80 3 0 33 126 181 -6.390 -1.568 -0.620 IR 80 80 3 80 3 3 36 128 184 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 145 - G - - MR 81 80 3 83 3 3 36 127 183 -8.417 -0.018 -6.735 -1.723 -2.965 1.754 -2.353 D 82 80 3 83 3 0 32 125 181 -6.390 -1.568 -0.620 IR 83 83 3 83 3 3 35 127 183 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 144 - A - - MR 84 83 3 86 3 3 35 126 182 -8.417 -0.065 -4.600 1.605 -2.046 -1.385 -1.584 D 85 83 3 86 3 0 31 124 180 -6.390 -1.568 -0.620 IR 86 86 3 86 3 2 35 127 182 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 143 - G - - MR 87 86 3 89 3 3 34 125 181 -8.371 -0.018 -6.688 -1.096 -2.464 1.621 -1.865 D 88 86 3 89 3 0 31 123 179 -6.743 -1.056 -0.973 IR 89 89 3 89 3 2 34 126 181 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 142 - G - - MR 90 89 3 92 3 2 33 124 180 -8.417 -0.018 -6.735 -0.201 -1.508 1.196 -1.036 D 91 89 3 92 3 0 29 122 178 -6.390 -1.568 -0.620 IR 92 92 3 92 3 2 33 125 180 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 141 - a - - MR 93 92 3 95 3 1 32 123 179 -8.417 -0.095 -4.038 0.565 -0.547 -0.668 0.271 D 94 92 3 95 3 0 29 121 177 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 32 124 179 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 140 - u - - MR 96 95 3 98 3 2 32 122 178 -8.341 -0.031 -5.805 0.378 -0.377 -0.996 0.515 D 97 95 3 98 3 0 28 121 176 -6.924 -0.883 -1.154 IR 98 98 3 98 3 1 31 123 178 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 139 - a - - MR 99 98 3 101 3 2 31 121 177 -8.406 -0.018 -6.724 0.559 -0.597 -1.020 0.457 D 100 98 3 101 3 0 26 119 175 -6.482 -1.402 -0.712 IR 101 101 3 101 3 1 30 122 177 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 138 - u - - MR 102 101 3 104 3 1 30 120 176 -8.417 -0.018 -6.735 0.480 -0.796 -1.075 0.637 D 103 101 3 104 3 0 25 118 174 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 29 121 176 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 137 - U - - MR 105 104 3 107 3 1 29 119 175 -2.285 -0.349 -6.735 0.025 -0.902 -1.260 1.021 D 106 104 3 107 3 0 24 117 172 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 29 119 175 -2.467 -0.345 -4.964 0.000 0.000 0.000 0.000 [ MATR 36 ] - 134 - U - - MR 108 107 3 110 3 1 28 118 174 -8.417 -0.097 -4.004 -0.262 -0.562 -1.302 1.059 D 109 107 3 110 3 0 24 116 172 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 28 118 174 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 133 - u - - MR 111 110 3 113 3 1 28 117 173 -8.339 -0.019 -6.657 -0.086 -0.730 -1.135 1.000 D 112 110 3 113 3 0 23 115 171 -6.937 -1.063 -0.963 IR 113 113 3 113 3 1 27 117 173 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 132 - G - - MR 114 113 3 116 3 1 27 116 172 -8.401 -0.018 -6.719 -0.790 -1.640 1.292 -0.615 D 115 113 3 116 3 0 21 114 170 -6.526 -1.704 -0.552 IR 116 116 3 116 3 1 26 117 172 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 131 - U - - MR 117 116 3 119 3 1 26 115 171 -6.044 -0.036 -6.719 -1.029 -1.149 -1.595 1.448 D 118 116 3 119 3 0 21 113 169 -3.312 -1.704 -0.756 IR 119 119 3 119 3 1 25 115 171 -2.036 -0.505 -4.275 0.000 0.000 0.000 0.000 [ MATR 40 ] - 129 - u - - MR 120 119 3 122 3 1 26 114 170 -8.417 -0.018 -6.735 -0.479 0.380 -1.353 0.668 D 121 119 3 122 3 0 20 112 167 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 24 114 170 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 128 - C - - MR 123 122 3 125 3 1 25 113 169 -8.417 -0.018 -6.735 -1.343 1.511 -2.256 -0.870 D 124 122 3 125 3 0 19 111 166 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 24 113 169 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 127 - a - - MR 126 125 3 128 3 1 24 112 168 -8.417 -0.018 -6.735 0.863 -0.939 -0.972 0.202 D 127 125 3 128 3 0 18 110 166 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 23 113 168 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 126 - A - - MR 129 128 3 131 3 1 24 111 167 -8.417 -0.018 -6.735 1.583 -1.880 -1.709 -1.227 D 130 128 3 131 3 0 17 109 165 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 22 112 167 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 125 - A - - MR 132 131 3 134 5 1 23 110 166 -7.152 -0.037 -6.967 -7.180 -8.071 1.747 -2.507 -2.126 -2.063 D 133 131 3 134 5 0 16 108 164 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 20 110 166 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 27 124 g c - - MP 135 134 3 139 6 2 23 109 165 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -2.148 -2.306 -2.899 2.133 -3.008 -3.720 1.052 -3.201 -3.007 2.222 -3.491 -0.096 0.922 -2.990 -0.797 -1.945 ML 136 134 3 139 6 1 18 107 163 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 17 107 162 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 13 103 159 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 19 108 164 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 20 108 164 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 28 123 g c - - MP 141 140 6 145 6 2 21 107 163 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -3.392 -2.438 -3.402 2.011 -3.821 -4.219 0.571 -3.740 -3.493 2.736 -3.933 0.170 0.375 -3.480 -1.375 -2.343 ML 142 140 6 145 6 1 17 105 161 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 16 105 160 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 12 102 157 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 19 106 162 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 19 106 162 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 29 122 G C - - MP 147 146 6 151 6 2 20 105 161 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -3.925 -2.662 -3.933 1.198 -4.581 -4.478 -0.008 -4.314 -3.890 3.279 -4.281 0.242 -0.293 -3.881 -1.991 -2.842 ML 148 146 6 151 6 1 16 103 159 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 15 103 159 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 12 100 156 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 18 105 160 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 18 104 160 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 30 121 G C - - MP 153 152 6 157 6 2 18 103 159 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -4.355 -2.902 -4.400 0.869 -4.973 -4.635 -0.343 -4.724 -4.144 3.496 -4.511 -0.561 -0.667 -4.215 -2.359 -3.286 ML 154 152 6 157 6 1 15 102 157 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 14 101 157 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 11 99 154 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 16 103 158 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 16 102 158 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 31 120 u g - - MP 159 158 6 163 4 2 16 101 157 -7.020 -7.227 -0.051 -5.641 -3.189 -3.244 -3.177 0.231 -1.301 -3.828 1.776 -3.030 -3.213 0.381 -3.656 -1.462 1.279 -3.400 2.527 -1.567 ML 160 158 6 163 4 1 14 100 156 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 12 99 155 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 11 98 154 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 15 101 157 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 15 101 156 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 32 - G - - - ML 165 164 6 167 3 1 14 99 155 -8.031 -0.020 -6.685 -0.195 -1.873 1.289 -1.285 D 166 164 6 167 3 0 11 97 152 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 14 100 155 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 33 - A - - - ML 168 167 3 170 3 1 13 98 154 -8.031 -0.020 -6.685 1.747 -2.507 -2.126 -2.063 D 169 167 3 170 3 0 10 96 152 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 13 99 154 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 34 - G - - - ML 171 170 3 173 3 1 12 97 153 -8.031 -0.020 -6.685 -0.585 -1.473 1.304 -0.990 D 172 170 3 173 3 0 9 95 151 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 12 98 153 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 35 - U - - - ML 174 173 3 176 3 1 11 96 152 -8.031 -0.020 -6.685 -1.611 -1.585 -2.350 1.652 D 175 173 3 176 3 0 9 94 150 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 11 97 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 36 - u - - - ML 177 176 3 179 3 1 10 95 151 -8.031 -0.256 -2.657 -0.602 0.492 -1.431 0.645 D 178 176 3 179 3 0 8 94 149 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 11 96 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 37 - u - - - ML 180 179 3 182 3 1 10 94 150 -8.201 -0.021 -6.518 0.116 -0.562 -0.784 0.730 D 181 179 3 182 3 0 7 93 149 -6.528 -0.344 -2.311 IL 182 182 3 182 3 1 10 95 150 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 56 ] - 119 - A - - MR 183 182 3 185 3 1 9 93 149 -8.417 -0.149 -3.391 1.747 -2.507 -2.126 -2.063 D 184 182 3 185 3 0 5 92 147 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 10 94 149 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 57 ] - 118 - U - - MR 186 185 3 188 3 1 10 93 148 -8.288 -0.020 -6.606 -0.806 -0.983 -1.320 1.334 D 187 185 3 188 3 0 4 91 146 -7.195 -0.688 -1.425 IR 188 188 3 188 3 1 8 93 148 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 58 ] - 117 - U - - MR 189 188 3 191 3 1 9 92 147 -8.417 -0.018 -6.735 -0.384 -0.886 -0.616 1.028 D 190 188 3 191 3 0 3 90 145 -6.390 -1.568 -0.620 IR 191 191 3 191 3 1 7 92 147 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 116 - G - - MR 192 191 3 194 5 1 9 91 146 -3.515 -0.162 -6.967 -7.180 -8.071 -0.277 -1.515 1.151 -0.726 D 193 191 3 194 5 0 2 89 144 -5.352 -0.707 -2.978 -4.409 -2.404 IR 194 194 3 194 5 1 6 91 146 -2.713 -0.388 -6.224 -4.392 -5.498 0.000 0.000 0.000 0.000 [ MATP 60 ] 38 114 c g - - MP 195 194 3 199 6 2 10 89 145 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -1.671 -1.987 -2.013 1.286 -1.333 -2.861 1.805 -2.283 -2.065 1.069 -2.202 -0.511 1.754 -2.154 0.136 -0.836 ML 196 194 3 199 6 1 4 87 143 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 3 199 6 1 4 87 143 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 3 199 6 0 0 84 139 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 5 89 144 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 5 89 144 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 39 113 g c - - MP 201 200 6 205 6 2 9 88 143 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -2.750 -2.369 -2.827 1.766 -2.738 -3.608 1.478 -3.065 -2.935 2.105 -3.421 -0.224 1.248 -2.899 -0.429 -1.531 ML 202 200 6 205 6 1 3 86 141 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 3 85 141 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 82 137 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 5 87 142 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 5 87 142 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 40 112 g c - - MP 207 206 6 211 6 2 7 86 141 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -2.146 -1.993 -2.296 1.550 -2.324 -3.089 1.273 -2.627 -2.175 1.969 -2.579 0.191 1.155 -2.391 -0.368 -0.220 ML 208 206 6 211 6 1 3 84 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 3 83 139 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 80 136 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 4 85 140 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 4 85 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 41 111 c g - - MP 213 212 6 217 6 2 5 84 139 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -2.437 -2.418 -2.576 1.274 -2.263 -3.405 1.874 -2.708 -2.609 1.309 -3.149 -0.407 1.654 -2.709 0.765 -1.271 ML 214 212 6 217 6 1 2 82 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 2 82 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 79 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 3 83 138 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 3 83 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 42 110 u a - - MP 219 218 6 223 4 2 3 82 137 -7.020 -7.227 -0.051 -5.641 -3.607 -3.501 -3.557 0.189 -2.665 -4.210 1.704 -3.315 -3.567 0.672 -4.000 -1.476 2.944 -3.781 -0.026 -2.447 ML 220 218 6 223 4 1 1 81 136 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 4 1 1 80 135 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 222 218 6 223 4 0 0 79 134 -4.568 -4.250 -2.265 -0.520 IL 223 223 5 223 4 1 2 82 137 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 224 224 6 224 3 1 2 81 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 43 - G - - - ML 225 224 6 227 3 1 1 80 135 -8.031 -0.304 -2.426 -0.654 -1.725 1.409 -1.300 D 226 224 6 227 3 0 0 78 133 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 2 80 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 44 - c - - - ML 228 227 3 230 3 1 2 79 134 -7.751 -0.024 -6.405 -0.654 0.865 -1.436 0.230 D 229 227 3 230 3 0 0 77 133 -7.612 -0.424 -2.003 IL 230 230 3 230 3 1 1 79 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 45 - U - - - ML 231 230 3 233 3 1 2 78 133 -8.031 -0.020 -6.685 -0.504 -0.763 -1.463 1.228 D 232 230 3 233 3 0 0 76 131 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 78 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 46 - A - - - ML 234 233 3 236 3 1 1 77 132 -2.410 -0.317 -6.735 1.747 -2.507 -2.126 -2.063 D 235 233 3 236 3 0 0 75 130 -5.620 -0.734 -1.403 IL 236 236 3 236 3 1 1 77 132 -2.631 -0.314 -4.870 0.000 0.000 0.000 0.000 [ MATR 69 ] - 109 - C - - MR 237 236 3 239 3 1 1 75 131 -8.417 -0.018 -6.735 -0.928 1.024 -1.745 0.192 D 238 236 3 239 3 0 0 73 129 -6.390 -1.568 -0.620 IR 239 239 3 239 3 1 1 76 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 70 ] - 108 - u - - MR 240 239 3 242 3 1 1 74 130 -8.417 -0.018 -6.735 0.260 -0.708 -0.997 0.756 D 241 239 3 242 3 0 0 72 128 -6.390 -1.568 -0.620 IR 242 242 3 242 3 1 1 75 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 71 ] - 107 - A - - MR 243 242 3 245 3 1 1 74 129 -8.417 -0.018 -6.735 1.747 -2.507 -2.126 -2.063 D 244 242 3 245 3 0 0 72 127 -6.390 -1.568 -0.620 IR 245 245 3 245 3 1 1 74 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 72 ] - 106 - G - - MR 246 245 3 248 5 1 1 73 128 -5.290 -0.065 -6.967 -7.180 -8.071 -1.304 -2.664 1.677 -2.065 D 247 245 3 248 5 0 0 71 126 -5.352 -0.707 -2.978 -4.409 -2.404 IR 248 248 3 248 5 1 1 73 128 -2.485 -0.466 -5.996 -4.163 -5.269 0.000 0.000 0.000 0.000 [ MATP 73 ] 48 104 a u - - MP 249 248 3 253 6 2 2 72 127 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -3.491 -2.530 -3.558 2.833 -3.990 -4.713 0.338 -3.741 -3.480 2.132 -4.003 -0.076 0.026 -3.896 -1.598 -2.414 ML 250 248 3 253 6 1 1 70 125 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 251 248 3 253 6 1 1 69 125 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 252 248 3 253 6 0 0 66 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 253 253 5 253 6 1 1 71 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 254 254 6 254 5 1 1 71 126 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 74 ] 49 103 A U - - MP 255 254 6 259 6 2 2 70 125 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -3.737 -2.748 -3.785 3.273 -4.246 -5.195 0.063 -3.874 -3.665 1.351 -4.220 -0.226 -0.291 -4.332 -1.872 -2.612 ML 256 254 6 259 6 1 1 68 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 257 254 6 259 6 1 1 68 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 258 254 6 259 6 0 0 65 121 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 259 259 5 259 6 1 1 69 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 260 260 6 260 5 1 1 69 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 75 ] 50 102 g c - - MP 261 260 6 265 4 2 2 68 123 -7.020 -7.227 -0.116 -3.998 -2.869 -2.225 -2.905 1.269 -3.166 -3.638 0.993 -3.309 -2.409 2.748 -3.117 0.284 0.654 -2.921 -0.911 -1.517 ML 262 260 6 265 4 1 1 67 122 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 263 260 6 265 4 1 1 66 121 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 264 260 6 265 4 0 0 65 120 -4.568 -4.250 -2.265 -0.520 IL 265 265 5 265 4 1 1 68 123 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 266 266 6 266 3 1 1 67 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 51 - C - - - ML 267 266 6 269 3 1 1 66 121 -7.973 -0.020 -6.627 -1.762 1.630 -2.587 -1.172 D 268 266 6 269 3 0 0 64 119 -6.643 -0.995 -1.035 IL 269 269 3 269 3 1 1 66 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 77 ] 52 - A - - - ML 270 269 3 272 3 1 1 65 120 -8.031 -0.020 -6.685 1.207 -1.530 -0.250 -0.988 D 271 269 3 272 3 0 0 62 118 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 65 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 78 ] 53 - a - - - ML 273 272 3 275 3 1 1 64 119 -5.483 -0.047 -6.685 0.696 -0.295 -0.956 0.070 D 274 272 3 275 3 0 0 62 117 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 64 120 -1.505 -0.753 -4.205 0.000 0.000 0.000 0.000 [ MATL 79 ] 55 - G - - - ML 276 275 3 278 3 1 1 63 118 -8.417 -0.047 -5.099 -1.723 -2.965 1.754 -2.353 D 277 275 3 278 3 0 0 61 117 -5.620 -0.734 -1.403 IL 278 278 3 278 3 1 1 63 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 80 ] - 101 - c - - MR 279 278 3 281 3 1 1 62 117 -8.389 -0.018 -6.706 -0.550 0.821 -1.275 0.186 D 280 278 3 281 3 0 0 60 115 -6.619 -1.202 -0.849 IR 281 281 3 281 3 1 1 62 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 81 ] - 100 - U - - MR 282 281 3 284 3 1 1 61 116 -8.417 -0.018 -6.735 -0.420 -0.690 -1.405 1.173 D 283 281 3 284 3 0 0 59 114 -6.390 -1.568 -0.620 IR 284 284 3 284 3 1 1 61 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 82 ] - 99 - A - - MR 285 284 3 287 5 1 1 60 115 -7.152 -0.037 -6.967 -7.180 -8.071 1.747 -2.507 -2.126 -2.063 D 286 284 3 287 5 0 0 58 113 -5.352 -0.707 -2.978 -4.409 -2.404 IR 287 287 3 287 5 1 1 60 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 83 ] 56 98 C G - - MP 288 287 3 292 6 2 2 59 114 -9.135 -9.075 -0.021 -7.851 -8.131 -8.526 -4.699 -4.618 -4.363 -0.837 -3.049 -4.756 3.595 -3.874 -4.418 -0.617 -4.663 -2.567 0.450 -4.758 -0.759 -3.253 ML 289 287 3 292 6 1 1 57 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 290 287 3 292 6 1 1 56 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 291 287 3 292 6 0 0 52 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 292 292 5 292 6 1 1 58 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 293 293 6 293 5 1 1 58 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 84 ] 57 97 c g - - MP 294 293 6 298 6 2 2 57 112 -6.094 -9.075 -0.050 -7.851 -8.131 -6.728 -3.777 -3.709 -3.638 0.056 -2.546 -4.198 2.855 -3.266 -3.648 0.297 -4.030 -1.674 2.130 -3.908 -0.213 -2.509 ML 295 293 6 298 6 1 1 54 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 296 293 6 298 6 1 1 54 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 297 293 6 298 6 0 0 50 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 298 298 5 298 6 1 1 56 112 -1.269 -3.559 -1.477 -5.214 -5.991 -3.348 0.000 0.000 0.000 0.000 IR 299 299 6 299 5 1 1 56 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 85 ] 63 96 g c - - MP 300 299 6 304 6 2 2 55 110 -5.014 -9.046 -0.081 -7.823 -8.102 -6.183 -3.064 -2.452 -3.090 1.556 -3.044 -3.845 1.447 -3.321 -3.218 2.433 -3.668 -0.228 1.146 -3.138 -0.695 -2.073 ML 301 299 6 304 6 1 1 52 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 302 299 6 304 6 1 1 51 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 303 299 6 304 6 0 0 47 102 -9.469 -8.167 -3.964 -4.647 -4.664 -0.232 IL 304 304 5 304 6 1 1 54 110 -1.086 -3.923 -1.841 -5.578 -6.354 -2.731 0.000 0.000 0.000 0.000 IR 305 305 6 305 5 1 1 54 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 86 ] 68 95 c g - - MP 306 305 6 310 4 2 2 53 108 -2.711 -6.993 -0.305 -5.053 -2.797 -2.704 -2.883 1.049 -2.350 -3.676 2.085 -2.868 -2.898 1.240 -3.411 -0.757 2.014 -3.032 0.235 -1.623 ML 307 305 6 310 4 1 1 50 105 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 308 305 6 310 4 1 1 47 103 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 309 305 6 310 4 0 0 45 100 -5.532 -5.214 -1.992 -0.515 IL 310 310 5 310 4 1 1 56 112 -0.479 -4.516 -2.114 -7.001 0.000 0.000 0.000 0.000 IR 311 311 6 311 3 1 1 41 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 87 ] 79 - c - - - ML 312 311 6 314 3 1 1 40 84 -7.874 -0.022 -6.528 -0.469 0.603 -1.311 0.438 D 313 311 6 314 3 0 0 37 81 -7.174 -2.687 -0.255 IL 314 314 3 314 3 1 1 40 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 88 ] 80 - U - - - ML 315 314 3 317 3 1 1 39 83 -7.874 -0.022 -6.528 -0.679 -0.808 -1.495 1.292 D 316 314 3 317 3 0 0 37 81 -7.174 -2.687 -0.255 IL 317 317 3 317 3 1 1 39 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 89 ] 81 - U - - - ML 318 317 3 320 3 1 1 38 82 -7.874 -0.022 -6.528 -0.307 -0.546 -1.248 1.061 D 319 317 3 320 3 0 0 36 80 -7.174 -2.687 -0.255 IL 320 320 3 320 3 1 1 38 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 90 ] 82 - g - - - ML 321 320 3 323 3 1 1 37 81 -7.874 -0.151 -3.393 0.229 -0.781 0.297 0.024 D 322 320 3 323 3 0 0 36 80 -7.174 -2.687 -0.255 IL 323 323 3 323 3 1 1 37 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 91 ] 83 - a - - - ML 324 323 3 326 3 1 1 35 79 -3.347 -0.526 -2.271 0.400 -0.663 -0.104 0.160 D 325 323 3 326 3 0 0 37 81 -2.088 -2.718 -0.706 IL 326 326 3 326 3 1 1 40 84 -0.604 -1.635 -5.656 0.000 0.000 0.000 0.000 [ MATL 92 ] 94 - a - - - ML 327 326 3 329 2 1 1 1 1 * 0.000 0.544 -0.823 0.016 -0.051 D 328 326 3 329 2 0 0 0 0 * 0.000 IL 329 329 3 329 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 93 ] - - - - - - E 330 329 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME 6S-Flavo ACC RF01685 DESC 6S-Flavo RNA LENG 109 MAXL 212 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Apr 14 16:08:54 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 82 EFFN 2.620056 CKSUM 2392151758 STATS LOCAL MSV -9.8113 0.71827 STATS LOCAL VITERBI -10.7832 0.71827 STATS LOCAL FORWARD -2.9325 0.71827 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25825 1.58670 1.50033 1.24413 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 0.00000 * 1 0.13461 3.36965 3.08111 3.08706 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 2 3.00437 0.17218 3.58029 2.51662 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 3 2.73290 2.67611 3.25498 0.18928 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 4 2.77595 0.23418 3.35685 2.19244 4 C - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 5 0.13461 3.36965 3.08111 3.08706 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 6 0.13461 3.36965 3.08111 3.08706 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 7 3.00437 0.17218 3.58029 2.51662 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.24004 4.03528 1.63107 1.46634 0.26236 1.09861 0.40547 8 0.81386 2.32856 1.16008 1.92441 8 a - - : 1.38629 1.38629 1.38629 1.38629 0.04397 3.83922 3.83922 1.46634 0.26236 2.57030 0.07960 9 1.39764 0.96309 2.03396 1.42590 9 c - - : 1.38629 1.38629 1.38629 1.38629 0.13388 2.26533 3.83922 0.37290 1.16711 0.16608 1.87715 10 1.68689 2.08724 1.25291 0.90337 11 u - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 11 0.43279 2.23016 2.39691 1.87866 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.25253 1.93445 2.54261 0.22897 1.58647 1.09861 0.40547 12 0.84151 1.84429 1.69196 1.48436 14 a - - : 1.38629 1.38629 1.38629 1.38629 0.03839 3.97236 3.97236 1.46634 0.26236 0.37125 1.17077 13 2.03023 1.90997 2.61585 0.43463 15 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 14 1.44525 1.94736 2.32338 0.64680 16 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 15 1.36759 1.74867 2.24615 0.76471 17 u - - : 1.38629 1.38629 1.38629 1.38629 0.30500 4.03528 1.40569 1.46634 0.26236 1.09861 0.40547 16 1.24642 1.70639 2.01852 0.92106 18 u - - : 1.38629 1.38629 1.38629 1.38629 0.04686 3.77713 3.77713 1.46634 0.26236 0.24548 1.52479 17 1.09627 1.94483 2.18168 0.89155 19 u - - : 1.38629 1.38629 1.38629 1.38629 0.23461 1.65564 4.00924 0.18029 1.80199 0.59609 0.80065 18 2.73290 2.67611 3.25498 0.18928 21 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 19 2.15477 2.34687 2.79734 0.31824 22 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 20 0.44102 2.09759 2.23711 2.06277 23 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 21 0.77753 2.08528 1.96543 1.28702 24 a - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 22 0.55914 2.54112 1.44818 2.16700 25 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 23 0.13461 3.36965 3.08111 3.08706 26 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 24 1.12435 1.97287 1.00812 1.76506 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 25 1.25029 2.34840 0.68586 2.16807 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 26 1.83208 2.76185 0.35041 2.62629 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 27 2.08828 3.04350 0.25445 2.93574 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 28 2.50581 1.45137 2.32336 0.53410 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 29 1.57022 2.83465 0.43717 2.43723 32 G - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 30 0.13461 3.36965 3.08111 3.08706 33 A - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 31 1.88451 2.49095 0.42636 2.18583 34 G - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 32 2.73290 2.67611 3.25498 0.18928 35 U - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 33 1.88256 1.00025 2.47581 0.92655 36 u - - - 1.38629 1.38629 1.38629 1.38629 0.23138 4.03528 1.66664 1.46634 0.26236 1.09861 0.40547 34 1.31227 1.80508 1.95823 0.85514 37 u - - - 1.38629 1.38629 1.38629 1.38629 0.04360 3.84750 3.84750 1.46634 0.26236 0.17161 1.84711 35 1.57107 1.34287 1.61450 1.10235 38 u - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 36 1.37482 1.66175 1.09322 1.50430 39 g - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 37 1.46784 1.74291 1.08042 1.36604 40 g - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 38 1.67312 1.36963 1.55841 1.05650 41 u - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 39 2.52738 1.57141 2.12936 0.52177 42 U - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 40 1.93939 2.68955 0.35510 2.43958 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.27229 4.03528 1.51102 1.46634 0.26236 1.09861 0.40547 41 1.93826 0.72138 2.49267 1.24732 44 c - - - 1.38629 1.38629 1.38629 1.38629 0.04538 3.80837 3.80837 1.46634 0.26236 0.14862 1.97974 42 1.80698 1.98135 2.51075 0.48327 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 43 0.13461 3.36965 3.08111 3.08706 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.30470 1.40661 4.03528 0.13858 2.04480 1.09861 0.40547 44 0.67369 2.58403 1.11238 2.45420 48 A - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 45 0.37742 2.85039 1.65261 2.73337 49 A - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 46 1.72374 2.02110 0.62081 1.88662 50 G - - < 1.38629 1.38629 1.38629 1.38629 0.08444 4.03528 2.76000 1.46634 0.26236 1.09861 0.40547 47 2.89478 0.19189 3.47106 2.42809 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98860 3.98860 1.46634 0.26236 0.44386 1.02599 48 0.50729 2.56930 1.55620 2.20410 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 49 0.87730 1.58815 2.10056 1.35711 53 a - - - 1.38629 1.38629 1.38629 1.38629 0.05836 3.24406 4.03528 0.74544 0.64346 1.09861 0.40547 50 2.83318 3.72858 0.12739 3.30344 55 G - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 51 3.32219 0.21073 3.11674 2.21062 56 C - - < 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 52 2.62161 0.71741 2.37575 1.06030 57 c - - < 1.38629 1.38629 1.38629 1.38629 0.09292 2.94244 3.32423 1.40547 0.28137 1.09861 0.40547 53 1.53673 1.70539 0.89122 1.64475 63 g - - < 1.38629 1.38629 1.38629 1.38629 0.19960 2.33011 2.48102 1.12268 0.39364 1.39528 0.28470 54 1.84916 1.23905 1.65945 1.01410 68 u - - < 1.38629 1.38629 1.38629 1.38629 0.31836 1.81997 2.20158 1.78643 0.18339 0.73089 0.65678 55 1.77773 0.91625 2.38211 1.08291 79 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04096 3.90875 3.90875 1.46634 0.26236 2.27438 0.10854 56 1.95570 2.02209 2.54118 0.43482 80 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04096 3.90875 3.90875 1.46634 0.26236 2.27438 0.10854 57 1.64882 1.80265 2.33395 0.60523 81 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04096 3.90875 3.90875 1.46634 0.26236 2.27438 0.10854 58 1.23700 1.96196 1.14222 1.38608 82 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05563 3.90875 3.38019 1.46634 0.26236 2.27438 0.10854 59 1.10356 1.87025 1.44233 1.28067 83 a - - _ 1.38629 1.38629 1.38629 1.38629 0.58150 1.56968 1.45746 1.58738 0.22873 1.81011 0.17869 60 0.99787 1.99125 1.35762 1.43742 94 a - - _ 1.38629 1.38629 1.38629 1.38629 0.10590 3.67387 2.58884 1.46634 0.26236 0.60266 0.79264 61 1.23411 1.81984 1.04207 1.63922 95 g - - > 1.38629 1.38629 1.38629 1.38629 0.04304 3.86023 3.86023 1.46634 0.26236 0.53680 0.87855 62 1.85124 0.99701 1.54869 1.34152 96 c - - > 1.38629 1.38629 1.38629 1.38629 0.03807 3.98043 3.98043 1.46634 0.26236 0.40390 1.10175 63 1.19585 2.54453 0.64025 2.38724 97 G - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 64 2.49582 3.29520 0.17984 3.09882 98 G - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 65 0.13461 3.36965 3.08111 3.08706 99 A - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 66 1.73782 1.92007 2.46131 0.52395 100 U - - - 1.38629 1.38629 1.38629 1.38629 0.06150 4.03528 3.17086 1.46634 0.26236 1.09861 0.40547 67 1.84851 0.75745 2.35308 1.27800 101 c - - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01069 4.01069 1.46634 0.26236 0.61118 0.78244 68 2.13338 0.76328 1.82619 1.36883 102 c - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 69 2.95628 1.90924 2.65889 0.31503 103 U - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 70 2.68355 1.27224 2.39447 0.57936 104 U - - > 1.38629 1.38629 1.38629 1.38629 0.06150 3.17086 4.03528 0.69981 0.68653 1.09861 0.40547 71 2.47159 3.47449 0.17681 3.06544 106 G - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 72 0.13461 3.36965 3.08111 3.08706 107 A - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 73 1.20134 1.92235 2.12595 0.83557 108 u - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 74 2.15964 0.61379 2.74241 1.27682 109 C - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 75 0.61815 2.27556 1.35625 2.29567 110 A - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 76 1.45204 1.75154 1.03156 1.44414 111 g - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 77 1.71923 1.28472 1.53234 1.11463 112 u - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 78 1.74770 1.22445 1.47903 1.19057 113 u - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 79 1.28808 1.79987 1.16565 1.39773 114 g - - > 1.38629 1.38629 1.38629 1.38629 0.15176 2.09453 4.03528 0.26597 1.45442 1.09861 0.40547 80 1.63558 2.54110 0.53278 1.97034 116 G - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 81 1.71145 2.07501 1.83282 0.62759 117 U - - - 1.38629 1.38629 1.38629 1.38629 0.15176 4.03528 2.09453 1.46634 0.26236 1.09861 0.40547 82 2.07367 2.17506 2.40897 0.39933 118 U - - - 1.38629 1.38629 1.38629 1.38629 0.04033 3.92385 3.92385 1.46634 0.26236 0.25246 1.50007 83 0.13461 3.36965 3.08111 3.08706 119 A - - - 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 84 1.71497 2.48642 0.46719 2.20669 120 G - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 85 3.15803 0.29531 2.86785 1.85555 121 C - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 86 2.86526 0.44711 2.57766 1.48013 122 C - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 87 2.39832 0.80998 2.16214 1.05216 123 c - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 88 1.93729 1.14043 1.78598 0.99807 124 u - - > 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 89 0.13461 3.36965 3.08111 3.08706 125 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 90 0.24424 2.84168 2.72929 2.37402 126 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 91 0.75633 2.09642 2.11487 1.24803 127 a - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 92 2.51660 0.27238 3.17568 2.15473 128 C - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 93 1.78286 1.08142 2.41247 0.90848 129 u - - : 1.38629 1.38629 1.38629 1.38629 0.05146 3.42710 4.03528 0.87201 0.54148 1.09861 0.40547 94 2.25280 2.31034 2.62549 0.32398 131 U - - : 1.38629 1.38629 1.38629 1.38629 0.05054 4.03528 3.45446 1.46634 0.26236 1.09861 0.40547 95 2.06493 2.66626 0.42663 1.89077 132 G - - : 1.38629 1.38629 1.38629 1.38629 0.09171 4.02126 2.66356 1.46634 0.26236 1.33171 0.30656 96 1.47207 1.94910 2.24224 0.65022 133 U - - : 1.38629 1.38629 1.38629 1.38629 0.03855 3.96810 3.96810 1.46634 0.26236 0.35616 1.20519 97 1.60758 1.81291 2.37243 0.61028 134 U - - : 1.38629 1.38629 1.38629 1.38629 0.33362 1.32429 4.03528 0.18935 1.75734 1.09861 0.40547 98 1.38652 2.09051 2.34636 0.63353 137 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 99 1.03778 1.98988 2.19111 0.92318 138 u - - : 1.38629 1.38629 1.38629 1.38629 0.04569 4.03528 3.61263 1.46634 0.26236 1.09861 0.40547 100 0.97785 1.82777 2.14552 1.06102 139 a - - : 1.38629 1.38629 1.38629 1.38629 0.10478 4.02594 2.50550 1.46634 0.26236 0.83752 0.56701 101 1.11234 1.65606 2.12376 1.01959 140 u - - : 1.38629 1.38629 1.38629 1.38629 0.03848 3.97000 3.97000 1.46634 0.26236 0.36272 1.19001 102 0.97583 1.78455 1.87008 1.20019 141 a - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 103 1.57751 2.52430 0.50115 2.22965 142 G - - : 1.38629 1.38629 1.38629 1.38629 0.07737 4.03528 2.86879 1.46634 0.26236 1.09861 0.40547 104 2.30596 3.31823 0.21112 2.91056 143 G - - : 1.38629 1.38629 1.38629 1.38629 0.03749 3.99541 3.99541 1.46634 0.26236 0.48423 0.95757 105 0.23020 2.97764 2.45064 2.68135 144 A - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 106 2.83318 3.72858 0.12739 3.30344 145 G - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 107 2.73290 2.67611 3.25498 0.18928 146 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 108 2.73290 2.67611 3.25498 0.18928 147 U - - : 1.38629 1.38629 1.38629 1.38629 0.03600 4.03528 4.03528 1.46634 0.26236 1.09861 0.40547 109 2.52683 2.38206 3.04247 0.24845 148 U - - : 1.38629 1.38629 1.38629 1.38629 0.01816 4.01744 * 1.46634 0.26236 0.00000 * //