INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN70 ACC RF01652 DESC Caenorhabditis snoRNA ceN70 STATES 217 NODES 70 CLEN 71 W 88 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 02:51:49 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01652/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.702148 CKSUM 1996436597 NULL 0.000 0.000 0.000 0.000 GA 65.00 TC 66.20 NC 64.30 EFP7GF -8.1764 0.71885 ECMLC 0.71245 -5.45034 2.72878 1600000 407310 0.002946 ECMGC 0.39111 -18.42692 -4.26312 1600000 101833 0.003928 ECMLI 0.66859 -3.89179 4.29795 1600000 286545 0.004188 ECMGI 0.42065 -12.63980 -0.49060 1600000 66305 0.006033 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 88 109 -6.776 -8.022 -0.364 -2.252 IL 1 1 2 1 4 1 26 89 110 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 28 90 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 71 - U - - MR 3 2 3 5 5 1 27 88 109 -6.791 -0.048 -6.606 -6.819 -7.710 -0.869 -0.982 -1.561 1.383 D 4 2 3 5 5 0 22 87 107 -6.104 -0.377 -3.731 -5.162 -3.156 IR 5 5 3 5 5 1 25 88 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 70 G C - - MP 6 5 3 10 6 2 27 87 108 -9.071 -9.011 -0.022 -7.787 -8.067 -8.462 -4.571 -3.013 -4.656 0.312 -4.992 -4.626 -0.399 -4.885 -4.214 3.594 -4.564 -0.706 -0.789 -4.355 -2.427 -3.536 ML 7 5 3 10 6 1 23 86 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 22 86 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 18 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 24 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 24 86 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 69 C G - - MP 12 11 6 16 6 2 25 85 106 -9.071 -9.011 -0.022 -7.787 -8.067 -8.462 -4.372 -4.261 -4.091 -0.510 -2.849 -4.526 3.492 -3.641 -4.135 -0.243 -4.414 -2.206 0.682 -4.452 -0.552 -2.981 ML 13 11 6 16 6 1 22 84 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 20 84 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 17 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 23 85 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 23 84 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 68 G C - - MP 18 17 6 22 4 2 23 83 104 -6.852 -7.059 -0.057 -5.473 -4.571 -3.013 -4.656 0.312 -4.992 -4.626 -0.399 -4.885 -4.214 3.594 -4.564 -0.706 -0.789 -4.355 -2.427 -3.536 ML 19 17 6 22 4 1 21 83 104 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 18 83 103 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 17 82 102 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 22 84 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 4 - C - - - ML 24 23 6 26 3 1 22 81 101 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 25 23 6 26 3 0 16 79 100 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 21 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - G - - - ML 27 26 3 29 3 1 21 80 100 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 28 26 3 29 3 0 16 78 99 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 20 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - a - - - ML 30 29 3 32 3 1 20 79 99 -7.875 -0.022 -6.529 0.953 -1.318 0.092 -0.744 D 31 29 3 32 3 0 15 77 98 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 19 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 33 32 3 35 3 1 20 78 98 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 34 32 3 35 3 0 14 76 97 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 36 35 3 38 3 1 19 77 97 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 37 35 3 38 3 0 13 75 96 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 39 38 3 41 3 1 18 76 96 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 40 38 3 41 3 0 12 74 95 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 17 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - A - - - ML 42 41 3 44 3 1 17 75 95 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 43 41 3 44 3 0 12 73 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 16 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - u - - - ML 45 44 3 47 3 1 17 74 94 -7.875 -0.022 -6.529 0.230 -0.014 -0.992 0.416 D 46 44 3 47 3 0 11 72 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - U - - - ML 48 47 3 50 3 1 16 72 93 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 49 47 3 50 3 0 10 71 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - C - - - ML 51 50 3 53 3 1 15 71 92 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 52 50 3 53 3 0 9 70 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - u - - - ML 54 53 3 56 3 1 14 70 91 -7.875 -0.022 -6.529 0.232 -0.790 -1.081 0.827 D 55 53 3 56 3 0 9 69 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 13 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - U - - - ML 57 56 3 59 3 1 14 69 90 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 58 56 3 59 3 0 8 68 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 60 59 3 62 3 1 13 68 88 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 61 59 3 62 3 0 8 67 87 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - A - - - ML 63 62 3 65 3 1 12 67 87 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 64 62 3 65 3 0 7 66 86 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - C - - - ML 66 65 3 68 3 1 12 66 86 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 67 65 3 68 3 0 6 65 85 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - C - - - ML 69 68 3 71 3 1 11 65 85 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 70 68 3 71 3 0 6 64 84 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 72 71 3 74 3 1 10 64 84 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 73 71 3 74 3 0 5 63 83 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - U - - - ML 75 74 3 77 3 1 10 63 83 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 76 74 3 77 3 0 4 62 82 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - C - - - ML 78 77 3 80 3 1 9 62 82 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 79 77 3 80 3 0 3 61 81 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - U - - - ML 81 80 3 83 3 1 9 61 81 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 82 80 3 83 3 0 3 60 80 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 84 83 3 86 3 1 8 60 80 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 85 83 3 86 3 0 2 58 79 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - U - - - ML 87 86 3 89 3 1 7 59 79 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 88 86 3 89 3 0 2 57 78 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - C - - - ML 90 89 3 92 3 1 7 58 78 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 91 89 3 92 3 0 1 56 76 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - G - - - ML 93 92 3 95 3 1 6 57 77 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 94 92 3 95 3 0 0 55 75 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - G - - - ML 96 95 3 98 3 1 6 56 76 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 97 95 3 98 3 0 0 54 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - G - - - ML 99 98 3 101 3 1 5 55 75 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 100 98 3 101 3 0 0 53 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - G - - - ML 102 101 3 104 3 1 4 54 73 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 103 101 3 104 3 0 0 52 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 105 104 3 107 3 1 4 53 72 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 106 104 3 107 3 0 0 51 71 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - A - - - ML 108 107 3 110 3 1 3 52 71 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 109 107 3 110 3 0 0 50 70 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - U - - - ML 111 110 3 113 3 1 3 51 70 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 112 110 3 113 3 0 0 49 69 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - A - - - ML 114 113 3 116 3 1 3 49 69 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 115 113 3 116 3 0 0 48 68 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - a - - - ML 117 116 3 119 3 1 2 48 68 -7.875 -0.022 -6.529 0.830 -0.895 -1.015 0.251 D 118 116 3 119 3 0 0 47 67 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - C - - - ML 120 119 3 122 3 1 2 47 67 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 121 119 3 122 3 0 0 46 66 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - A - - - ML 123 122 3 125 3 1 2 46 66 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 124 122 3 125 3 0 0 45 65 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - c - - - ML 126 125 3 128 3 1 1 45 65 -7.875 -0.022 -6.529 0.292 0.566 -1.146 -0.247 D 127 125 3 128 3 0 0 44 64 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - u - - - ML 129 128 3 131 3 1 1 44 64 -7.875 -0.022 -6.529 0.175 -0.794 -1.101 0.871 D 130 128 3 131 3 0 0 43 62 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - C - - - ML 132 131 3 134 3 1 1 43 63 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 133 131 3 134 3 0 0 42 61 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 41 - u - - - ML 135 134 3 137 3 1 1 42 62 -7.875 -0.022 -6.529 -0.660 0.099 -1.413 0.942 D 136 134 3 137 3 0 0 41 60 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 42 - U - - - ML 138 137 3 140 3 1 1 41 60 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 139 137 3 140 3 0 0 40 59 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 43 - G - - - ML 141 140 3 143 3 1 1 40 59 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 142 140 3 143 3 0 0 39 58 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 44 - A - - - ML 144 143 3 146 3 1 1 39 58 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 145 143 3 146 3 0 0 37 57 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 45 - U - - - ML 147 146 3 149 3 1 1 38 57 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 148 146 3 149 3 0 0 36 56 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 46 - G - - - ML 150 149 3 152 3 1 1 37 56 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 151 149 3 152 3 0 0 35 55 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 47 - A - - - ML 153 152 3 155 3 1 1 36 55 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 154 152 3 155 3 0 0 34 54 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 48 - U - - - ML 156 155 3 158 3 1 1 35 54 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 157 155 3 158 3 0 0 33 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 49 - A - - - ML 159 158 3 161 3 1 1 33 53 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 160 158 3 161 3 0 0 32 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 50 - A - - - ML 162 161 3 164 3 1 1 32 52 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 163 161 3 164 3 0 0 31 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 51 - C - - - ML 165 164 3 167 3 1 1 31 50 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 166 164 3 167 3 0 0 30 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 52 - A - - - ML 168 167 3 170 3 1 1 30 49 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 169 167 3 170 3 0 0 29 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 53 - U - - - ML 171 170 3 173 3 1 1 29 48 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 172 170 3 173 3 0 0 28 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 54 - A - - - ML 174 173 3 176 3 1 1 28 47 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 175 173 3 176 3 0 0 27 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 55 - c - - - ML 177 176 3 179 3 1 1 27 46 -7.875 -0.022 -6.529 0.292 0.566 -1.146 -0.247 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 56 - C - - - ML 180 179 3 182 3 1 1 26 45 -7.875 -0.268 -2.597 -1.527 1.561 -2.343 -0.985 D 181 179 3 182 3 0 0 25 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 57 - C - - - ML 183 182 3 185 3 1 1 25 44 -7.633 -0.026 -6.287 -0.982 1.333 -1.766 -0.555 D 184 182 3 185 3 0 0 23 42 -7.402 -2.915 -0.215 IL 185 185 3 185 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 58 - A - - - ML 186 185 3 188 3 1 1 24 42 -7.633 -0.026 -6.287 1.530 -1.721 -1.417 -1.206 D 187 185 3 188 3 0 0 22 41 -7.402 -2.915 -0.215 IL 188 188 3 188 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 59 - U - - - ML 189 188 3 191 3 1 1 22 41 -7.633 -0.026 -6.287 -0.904 -1.010 -1.599 1.400 D 190 188 3 191 3 0 0 21 40 -7.402 -0.503 -1.794 IL 191 191 3 191 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 60 - u - - - ML 192 191 3 194 3 1 1 21 40 -7.875 -0.022 -6.529 0.232 -0.790 -1.081 0.827 D 193 191 3 194 3 0 0 20 39 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 61 - U - - - ML 195 194 3 197 3 1 1 20 39 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 196 194 3 197 3 0 0 19 38 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 62 - G - - - ML 198 197 3 200 3 1 1 19 38 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 199 197 3 200 3 0 0 18 37 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 63 - C - - - ML 201 200 3 203 3 1 1 18 36 -7.875 -0.022 -6.529 -1.527 1.561 -2.343 -0.985 D 202 200 3 203 3 0 0 17 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 64 - U - - - ML 204 203 3 206 3 1 1 16 35 -7.875 -0.022 -6.529 -1.323 -1.348 -2.048 1.568 D 205 203 3 206 3 0 0 16 34 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 65 - G - - - ML 207 206 3 209 3 1 1 15 33 -7.875 -0.022 -6.529 -1.390 -2.579 1.676 -1.965 D 208 206 3 209 3 0 0 15 33 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 66 - A - - - ML 210 209 3 212 3 1 1 13 32 -7.875 -0.022 -6.529 1.677 -2.192 -1.842 -1.718 D 211 209 3 212 3 0 0 13 32 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 67 - G - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 -1.390 -2.579 1.676 -1.965 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN70 ACC RF01652 DESC Caenorhabditis snoRNA ceN70 LENG 71 MAXL 159 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 02:51:49 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01652/CM NSEQ 3 EFFN 1.778320 CKSUM 1996436597 STATS LOCAL MSV -7.9010 0.71885 STATS LOCAL VITERBI -9.3812 0.71885 STATS LOCAL FORWARD -3.5198 0.71885 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31665 1.43058 1.51297 1.29996 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 0.00000 * 1 2.36541 2.89970 0.23317 2.82965 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 2 2.87025 0.32896 2.62780 1.88777 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 3 2.38897 2.92368 0.22628 2.86387 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 4 2.49509 0.28853 3.06267 2.10882 4 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 5 2.39497 3.22679 0.21269 2.80124 5 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 6 0.71874 2.31761 1.31833 1.92043 6 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 7 2.34153 2.35224 2.84607 0.28689 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 8 2.39497 3.22679 0.21269 2.80124 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 9 0.21332 2.94832 2.70143 2.62329 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 10 0.21332 2.94832 2.70143 2.62329 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 11 1.22662 1.39231 2.08304 1.09761 11 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 12 2.34153 2.35224 2.84607 0.28689 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 13 2.49509 0.28853 3.06267 2.10882 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 14 1.22603 1.94460 2.14781 0.80573 14 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 15 2.34153 2.35224 2.84607 0.28689 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 16 2.34153 2.35224 2.84607 0.28689 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 17 0.21332 2.94832 2.70143 2.62329 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 18 2.49509 0.28853 3.06267 2.10882 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 19 2.49509 0.28853 3.06267 2.10882 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 20 0.21332 2.94832 2.70143 2.62329 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 21 2.34153 2.35224 2.84607 0.28689 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 22 2.49509 0.28853 3.06267 2.10882 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 23 2.34153 2.35224 2.84607 0.28689 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 24 2.34153 2.35224 2.84607 0.28689 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 25 2.34153 2.35224 2.84607 0.28689 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 26 2.49509 0.28853 3.06267 2.10882 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 27 2.39497 3.22679 0.21269 2.80124 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 28 2.39497 3.22679 0.21269 2.80124 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 29 2.39497 3.22679 0.21269 2.80124 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 30 2.39497 3.22679 0.21269 2.80124 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 31 2.49509 0.28853 3.06267 2.10882 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 32 0.21332 2.94832 2.70143 2.62329 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 33 2.34153 2.35224 2.84607 0.28689 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 34 0.21332 2.94832 2.70143 2.62329 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 35 0.80536 2.01684 2.10118 1.21172 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 36 2.49509 0.28853 3.06267 2.10882 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 37 0.21332 2.94832 2.70143 2.62329 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 38 1.18368 0.98241 2.19614 1.56920 38 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 39 1.26679 1.94778 2.16277 0.77508 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 40 2.49509 0.28853 3.06267 2.10882 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 41 1.86107 1.31407 2.38463 0.72640 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 42 2.34153 2.35224 2.84607 0.28689 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 43 2.39497 3.22679 0.21269 2.80124 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 44 0.21332 2.94832 2.70143 2.62329 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 45 2.34153 2.35224 2.84607 0.28689 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 46 2.39497 3.22679 0.21269 2.80124 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 47 0.21332 2.94832 2.70143 2.62329 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 48 2.34153 2.35224 2.84607 0.28689 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 49 0.21332 2.94832 2.70143 2.62329 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 50 0.21332 2.94832 2.70143 2.62329 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 51 2.49509 0.28853 3.06267 2.10882 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 52 0.21332 2.94832 2.70143 2.62329 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 53 2.34153 2.35224 2.84607 0.28689 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 54 0.21332 2.94832 2.70143 2.62329 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 55 1.18368 0.98241 2.19614 1.56920 55 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 56 2.49509 0.28853 3.06267 2.10882 56 C - - _ 1.38629 1.38629 1.38629 1.38629 0.24002 3.83865 1.65098 1.46634 0.26236 1.09861 0.40547 57 2.10263 0.44369 2.64882 1.79899 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05328 3.65192 3.65192 1.46634 0.26236 2.39009 0.09609 58 0.31343 2.61108 2.39775 2.25681 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05328 3.65192 3.65192 1.46634 0.26236 2.39009 0.09609 59 2.04108 2.10848 2.52510 0.40251 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05328 3.65192 3.65192 1.46634 0.26236 0.20241 1.69694 60 1.22603 1.94460 2.14781 0.80573 60 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 61 2.34153 2.35224 2.84607 0.28689 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 62 2.39497 3.22679 0.21269 2.80124 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 63 2.49509 0.28853 3.06267 2.10882 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 64 2.34153 2.35224 2.84607 0.28689 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 65 2.39497 3.22679 0.21269 2.80124 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 66 0.21332 2.94832 2.70143 2.62329 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 67 2.39497 3.22679 0.21269 2.80124 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 68 3.08142 0.26313 2.76025 2.10222 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 69 2.16316 2.80446 0.28193 2.65680 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.04400 3.83865 3.83865 1.46634 0.26236 1.09861 0.40547 70 3.07589 0.26382 2.75799 2.10113 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.25744 3.83865 1.58256 1.46634 0.26236 1.09861 0.40547 71 2.01601 2.08854 2.49796 0.41446 71 U - - : 1.38629 1.38629 1.38629 1.38629 0.02746 3.60868 * 1.46634 0.26236 0.00000 * //