INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN65 ACC RF01648 DESC Caenorhabditis snoRNA ceN65 STATES 199 NODES 64 CLEN 65 W 82 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 03:23:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01648/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.743164 CKSUM 547185983 NULL 0.000 0.000 0.000 0.000 GA 48.00 TC 52.30 NC 43.80 EFP7GF -9.0235 0.71894 ECMLC 0.72479 -5.28851 2.68941 1600000 389427 0.003081 ECMGC 0.43342 -16.89200 -3.66040 1600000 123782 0.003231 ECMLI 0.68157 -3.90346 4.17293 1600000 294984 0.004068 ECMGI 0.48280 -10.84950 0.15380 1600000 81137 0.004930 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 102 -6.869 -7.077 -0.338 -2.374 IL 1 1 2 1 4 1 24 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 23 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 5 1 23 82 102 -6.818 -0.047 -6.633 -6.846 -7.737 1.538 -1.741 -1.436 -1.228 D 4 2 3 5 5 0 18 81 101 -5.792 -0.395 -5.053 -3.428 -3.341 IL 5 5 3 5 5 1 21 82 103 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 65 A U - - MP 6 5 3 10 6 2 23 81 101 -9.078 -9.017 -0.022 -7.794 -8.074 -8.469 -3.674 -2.736 -3.701 3.250 -3.981 -5.034 0.311 -3.750 -3.598 1.205 -4.140 -0.232 -0.107 -4.241 -1.631 -2.542 ML 7 5 3 10 6 1 18 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 17 79 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 14 77 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 20 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 20 80 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 64 G C - - MP 12 11 6 16 6 2 21 79 99 -9.078 -9.017 -0.022 -7.794 -8.074 -8.469 -4.604 -3.028 -4.691 0.291 -5.038 -4.639 -0.436 -4.923 -4.236 3.603 -4.583 -0.722 -0.826 -4.377 -2.466 -3.570 ML 13 11 6 16 6 1 17 78 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 16 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 13 76 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 19 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 19 78 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 63 C G - - MP 18 17 6 22 4 2 19 77 97 -6.869 -7.077 -0.056 -5.491 -4.405 -4.298 -4.119 -0.544 -2.870 -4.550 3.504 -3.665 -4.164 -0.282 -4.440 -2.244 0.659 -4.484 -0.573 -3.009 ML 19 17 6 22 4 1 16 77 98 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 14 77 97 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 13 75 96 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 18 78 99 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 24 23 6 26 3 1 18 75 95 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 25 23 6 26 3 0 12 73 94 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 27 26 3 29 3 1 17 74 94 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 28 26 3 29 3 0 11 72 92 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 30 29 3 32 3 1 16 73 93 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 31 29 3 32 3 0 11 71 91 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 33 32 3 35 3 1 15 72 92 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 34 32 3 35 3 0 10 70 90 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 36 35 3 38 3 1 15 71 91 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 37 35 3 38 3 0 9 69 89 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 39 38 3 41 3 1 14 69 90 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 40 38 3 41 3 0 8 68 88 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 42 41 3 44 3 1 13 68 89 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 43 41 3 44 3 0 8 67 87 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 45 44 3 47 3 1 12 67 88 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 46 44 3 47 3 0 7 66 86 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 48 47 3 50 3 1 12 66 86 -7.892 -0.022 -6.546 0.844 -0.908 -1.026 0.240 D 49 47 3 50 3 0 6 65 85 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 51 50 3 53 3 1 11 65 85 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 52 50 3 53 3 0 5 64 84 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - G - - - ML 54 53 3 56 3 1 10 64 84 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 55 53 3 56 3 0 5 63 83 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 57 56 3 59 3 1 10 63 83 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 58 56 3 59 3 0 4 62 82 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 60 59 3 62 3 1 9 62 82 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 61 59 3 62 3 0 3 61 81 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 63 62 3 65 3 1 8 61 81 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 64 62 3 65 3 0 2 60 80 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 66 65 3 68 3 1 8 60 80 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 67 65 3 68 3 0 2 59 79 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 69 68 3 71 3 1 7 59 79 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 70 68 3 71 3 0 1 58 78 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 72 71 3 74 3 1 6 58 78 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 73 71 3 74 3 0 0 56 77 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 75 74 3 77 3 1 6 57 77 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 76 74 3 77 3 0 0 55 75 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 78 77 3 80 3 1 5 56 76 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 79 77 3 80 3 0 0 54 74 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - U - - - ML 81 80 3 83 3 1 5 55 75 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 82 80 3 83 3 0 0 53 73 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - C - - - ML 84 83 3 86 3 1 4 54 74 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 85 83 3 86 3 0 0 52 72 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 87 86 3 89 3 1 4 53 72 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 88 86 3 89 3 0 0 51 71 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 90 89 3 92 3 1 3 52 71 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 91 89 3 92 3 0 0 50 70 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - A - - - ML 93 92 3 95 3 1 3 51 70 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 94 92 3 95 3 0 0 49 69 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 96 95 3 98 3 1 2 50 69 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 97 95 3 98 3 0 0 48 68 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 99 98 3 101 3 1 2 48 68 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 100 98 3 101 3 0 0 47 67 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 102 101 3 104 3 1 2 47 67 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 103 101 3 104 3 0 0 46 66 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - G - - - ML 105 104 3 107 3 1 1 46 66 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 106 104 3 107 3 0 0 45 65 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 108 107 3 110 3 1 1 45 65 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 109 107 3 110 3 0 0 44 64 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - C - - - ML 111 110 3 113 3 1 1 44 64 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 112 110 3 113 3 0 0 43 63 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 114 113 3 116 3 1 1 43 63 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 115 113 3 116 3 0 0 42 61 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 117 116 3 119 3 1 1 42 62 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 118 116 3 119 3 0 0 41 60 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 120 119 3 122 3 1 1 41 61 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 121 119 3 122 3 0 0 40 59 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 123 122 3 125 3 1 1 40 59 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 124 122 3 125 3 0 0 39 58 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - U - - - ML 126 125 3 128 3 1 1 39 58 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 127 125 3 128 3 0 0 38 57 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - c - - - ML 129 128 3 131 3 1 1 38 57 -7.892 -0.022 -6.546 -0.703 0.753 -1.491 0.427 D 130 128 3 131 3 0 0 37 56 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - c - - - ML 132 131 3 134 3 1 1 37 56 -7.892 -0.022 -6.546 0.281 0.587 -1.163 -0.257 D 133 131 3 134 3 0 0 35 55 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - C - - - ML 135 134 3 137 3 1 1 36 55 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 136 134 3 137 3 0 0 34 54 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - C - - - ML 138 137 3 140 3 1 1 35 54 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 139 137 3 140 3 0 0 33 53 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - A - - - ML 141 140 3 143 3 1 1 34 53 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 142 140 3 143 3 0 0 32 52 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - U - - - ML 144 143 3 146 3 1 1 32 52 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 145 143 3 146 3 0 0 31 51 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - G - - - ML 147 146 3 149 3 1 1 31 50 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 148 146 3 149 3 0 0 30 49 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - U - - - ML 150 149 3 152 3 1 1 30 49 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 151 149 3 152 3 0 0 29 48 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - U - - - ML 153 152 3 155 3 1 1 29 48 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 154 152 3 155 3 0 0 28 47 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - G - - - ML 156 155 3 158 3 1 1 28 47 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 157 155 3 158 3 0 0 27 46 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 159 158 3 161 3 1 1 27 46 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 160 158 3 161 3 0 0 26 45 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - G - - - ML 162 161 3 164 3 1 1 26 45 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 163 161 3 164 3 0 0 25 44 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 165 164 3 167 3 1 1 25 44 -7.892 -0.022 -6.546 1.685 -2.225 -1.872 -1.754 D 166 164 3 167 3 0 0 24 43 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 168 167 3 170 3 1 1 24 42 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 169 167 3 170 3 0 0 23 42 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - C - - - ML 171 170 3 173 3 1 1 22 41 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 172 170 3 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 174 173 3 176 3 1 1 21 40 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - U - - - ML 177 176 3 179 3 1 1 20 39 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - a - - - ML 180 179 3 182 3 1 1 19 37 -7.892 -0.022 -6.546 0.967 -1.333 0.082 -0.761 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - U - - - ML 183 182 3 185 3 1 1 18 36 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - C - - - ML 186 185 3 188 3 1 1 16 35 -7.892 -0.022 -6.546 -1.566 1.573 -2.384 -1.016 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - U - - - ML 189 188 3 191 3 1 1 15 33 -7.892 -0.022 -6.546 -1.353 -1.373 -2.079 1.578 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - G - - - ML 192 191 3 194 3 1 1 13 32 -7.892 -0.022 -6.546 -1.425 -2.620 1.685 -2.006 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - A - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 1.685 -2.225 -1.872 -1.754 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 63 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN65 ACC RF01648 DESC Caenorhabditis snoRNA ceN65 LENG 65 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 03:23:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01648/CM NSEQ 3 EFFN 1.831055 CKSUM 547185983 STATS LOCAL MSV -7.7289 0.71894 STATS LOCAL VITERBI -8.8297 0.71894 STATS LOCAL FORWARD -3.7692 0.71894 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29147 1.60684 1.46753 1.22376 1.38629 1.38629 1.38629 1.38629 0.24288 3.84494 1.63862 1.46634 0.26236 0.00000 * 1 0.30663 2.62982 2.41467 2.27701 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.05310 3.65516 3.65516 1.46634 0.26236 0.19902 1.71219 2 0.46885 2.46360 1.61550 2.40396 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 3 2.41139 2.95881 0.21889 2.90012 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 4 2.92477 0.31553 2.67118 1.91221 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 5 2.42577 3.26261 0.20492 2.83724 5 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 6 0.20656 2.97722 2.72742 2.65494 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 7 2.36780 2.37382 2.87378 0.27878 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 8 2.42577 3.26261 0.20492 2.83724 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 9 0.20656 2.97722 2.72742 2.65494 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 10 2.52967 0.27825 3.09856 2.13628 10 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 11 2.42577 3.26261 0.20492 2.83724 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 12 0.20656 2.97722 2.72742 2.65494 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 13 0.79449 2.02715 2.11043 1.21978 13 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 14 2.36780 2.37382 2.87378 0.27878 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 15 2.42577 3.26261 0.20492 2.83724 15 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 16 0.20656 2.97722 2.72742 2.65494 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 17 2.36780 2.37382 2.87378 0.27878 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 18 0.20656 2.97722 2.72742 2.65494 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 19 2.36780 2.37382 2.87378 0.27878 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 20 2.52967 0.27825 3.09856 2.13627 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 21 2.36780 2.37382 2.87378 0.27878 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 22 2.42577 3.26261 0.20492 2.83724 22 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 23 2.52967 0.27825 3.09856 2.13628 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 24 2.36780 2.37382 2.87378 0.27878 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 25 2.52967 0.27825 3.09856 2.13628 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 26 2.36780 2.37382 2.87378 0.27878 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 27 0.20656 2.97722 2.72742 2.65494 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 28 0.20656 2.97722 2.72742 2.65494 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 29 2.36780 2.37382 2.87378 0.27878 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 30 2.42577 3.26261 0.20492 2.83724 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 31 0.20656 2.97722 2.72742 2.65494 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 32 2.42577 3.26261 0.20492 2.83724 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 33 2.36780 2.37382 2.87378 0.27878 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 34 2.52967 0.27825 3.09856 2.13627 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 35 2.36780 2.37382 2.87378 0.27878 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 36 2.42577 3.26261 0.20492 2.83724 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 37 0.20656 2.97722 2.72742 2.65494 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 38 0.20656 2.97722 2.72742 2.65494 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 39 2.36780 2.37382 2.87378 0.27878 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 40 1.89440 0.85139 2.44387 1.09081 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 41 1.19203 0.96687 2.21039 1.57763 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 42 2.52967 0.27825 3.09856 2.13627 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 43 2.52967 0.27825 3.09856 2.13628 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 44 0.20656 2.97722 2.72742 2.65494 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 45 2.36780 2.37382 2.87378 0.27878 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 46 2.42577 3.26261 0.20492 2.83724 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 47 2.36780 2.37382 2.87378 0.27878 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 48 2.36780 2.37382 2.87378 0.27878 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 49 2.42577 3.26261 0.20492 2.83724 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 50 0.20656 2.97722 2.72742 2.65494 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 51 2.42577 3.26261 0.20492 2.83724 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 52 0.20656 2.97722 2.72742 2.65494 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 53 2.36780 2.37382 2.87378 0.27878 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 54 2.52967 0.27825 3.09856 2.13627 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 55 2.36780 2.37382 2.87378 0.27878 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 56 2.36780 2.37382 2.87378 0.27878 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 57 0.70810 2.33098 1.32507 1.93492 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 58 2.36780 2.37382 2.87378 0.27878 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 59 2.52967 0.27825 3.09856 2.13628 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 60 2.36780 2.37382 2.87378 0.27878 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 61 2.42577 3.26261 0.20492 2.83724 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 62 0.20656 2.97722 2.72742 2.65494 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 63 2.17787 2.82950 0.27599 2.67574 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 64 3.06842 0.26134 2.77386 2.11141 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.04372 3.84494 3.84494 1.46634 0.26236 1.09861 0.40547 65 2.58976 1.87662 2.26612 0.40326 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.02210 3.82332 * 1.46634 0.26236 0.00000 * //