INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN61 ACC RF01647 DESC Caenorhabditis snoRNA ceN61 STATES 220 NODES 71 CLEN 72 W 89 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 17:03:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01647/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.605469 CKSUM 1321746432 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 64.70 NC 46.50 EFP7GF -7.2843 0.71873 ECMLC 0.68118 -6.02940 2.45912 1600000 389377 0.003082 ECMGC 0.39503 -17.84072 -3.79442 1600000 102757 0.003893 ECMLI 0.66652 -3.99898 4.28961 1600000 300927 0.003988 ECMGI 0.44085 -11.50443 0.34770 1600000 74347 0.005380 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 89 110 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 IL 1 1 2 1 6 1 27 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 27 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 3 74 G C - - MP 3 2 3 7 6 2 29 89 110 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 4 2 3 7 6 1 25 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 23 88 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 20 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 26 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 26 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 4 73 U A - - MP 9 8 6 13 6 2 27 87 108 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.929 -3.744 -3.795 -0.059 -2.795 -4.383 1.526 -3.472 -3.803 0.238 -4.189 -1.651 3.187 -4.089 -0.478 -2.652 ML 10 8 6 13 6 1 24 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 22 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 19 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 25 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 25 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 5 72 C G - - MP 15 14 6 19 4 2 25 85 106 -6.809 -7.016 -0.059 -5.430 -4.293 -4.174 -4.025 -0.431 -2.802 -4.470 3.463 -3.586 -4.066 -0.151 -4.354 -2.119 0.737 -4.378 -0.503 -2.915 ML 16 14 6 19 4 1 23 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 20 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 18 14 6 19 4 0 19 84 105 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 24 87 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 6 - g - - - ML 21 20 6 23 3 1 24 83 104 -7.836 -0.023 -6.490 0.168 -1.475 0.979 -0.874 D 22 20 6 23 3 0 18 82 102 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 23 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 7 - A - - - ML 24 23 3 26 3 1 23 82 103 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 25 23 3 26 3 0 17 80 101 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 8 - U - - - ML 27 26 3 29 3 1 22 81 101 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 28 26 3 29 3 0 17 79 100 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 21 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - G - - - ML 30 29 3 32 3 1 21 80 100 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 31 29 3 32 3 0 16 78 99 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 21 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - A - - - ML 33 32 3 35 3 1 21 79 99 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 34 32 3 35 3 0 15 77 98 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - C - - - ML 36 35 3 38 3 1 20 78 98 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 37 35 3 38 3 0 14 76 97 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 12 - G - - - ML 39 38 3 41 3 1 19 77 97 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 40 38 3 41 3 0 14 75 96 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - A - - - ML 42 41 3 44 3 1 18 76 96 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 43 41 3 44 3 0 13 74 95 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - c - - - ML 45 44 3 47 3 1 17 75 95 -7.836 -0.023 -6.490 0.098 0.725 -1.204 -0.247 D 46 44 3 47 3 0 12 73 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - c - - - ML 48 47 3 50 3 1 17 74 94 -7.836 -0.023 -6.490 -0.713 0.873 -1.502 0.269 D 49 47 3 50 3 0 11 72 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - A - - - ML 51 50 3 53 3 1 16 73 93 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 52 50 3 53 3 0 10 71 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - a - - - ML 54 53 3 56 3 1 15 72 92 -7.836 -0.023 -6.490 0.650 -1.293 0.493 -0.699 D 55 53 3 56 3 0 10 70 90 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - a - - - ML 57 56 3 59 3 1 15 71 91 -7.836 -0.023 -6.490 0.709 -1.283 0.417 -0.692 D 58 56 3 59 3 0 9 69 89 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - A - - - ML 60 59 3 62 3 1 14 70 90 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 61 59 3 62 3 0 8 68 88 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - G - - - ML 63 62 3 65 3 1 13 69 89 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 64 62 3 65 3 0 7 67 87 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - U - - - ML 66 65 3 68 3 1 12 67 88 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 67 65 3 68 3 0 7 66 86 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - U - - - ML 69 68 3 71 3 1 12 66 87 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 70 68 3 71 3 0 6 65 85 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - A - - - ML 72 71 3 74 3 1 11 65 85 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 73 71 3 74 3 0 5 64 84 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - U - - - ML 75 74 3 77 3 1 10 64 84 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 76 74 3 77 3 0 5 63 83 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - C - - - ML 78 77 3 80 3 1 10 63 83 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 79 77 3 80 3 0 4 62 82 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - C - - - ML 81 80 3 83 3 1 9 62 82 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 82 80 3 83 3 0 3 61 81 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - C - - - ML 84 83 3 86 3 1 8 61 81 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 85 83 3 86 3 0 2 60 80 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - U - - - ML 87 86 3 89 3 1 8 60 80 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 88 86 3 89 3 0 2 59 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - G - - - ML 90 89 3 92 3 1 7 59 79 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 91 89 3 92 3 0 1 58 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - U - - - ML 93 92 3 95 3 1 6 58 78 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 94 92 3 95 3 0 0 57 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - C - - - ML 96 95 3 98 3 1 6 57 77 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 97 95 3 98 3 0 0 56 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - U - - - ML 99 98 3 101 3 1 5 56 76 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 100 98 3 101 3 0 0 54 74 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - G - - - ML 102 101 3 104 3 1 5 55 75 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 103 101 3 104 3 0 0 53 73 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - A - - - ML 105 104 3 107 3 1 4 54 74 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 106 104 3 107 3 0 0 52 72 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - A - - - ML 108 107 3 110 3 1 4 53 73 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 109 107 3 110 3 0 0 51 71 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - U - - - ML 111 110 3 113 3 1 3 52 72 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 112 110 3 113 3 0 0 50 70 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - G - - - ML 114 113 3 116 3 1 3 51 70 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 115 113 3 116 3 0 0 49 69 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - A - - - ML 117 116 3 119 3 1 2 50 69 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 118 116 3 119 3 0 0 48 68 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - U - - - ML 120 119 3 122 3 1 2 49 68 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 121 119 3 122 3 0 0 47 67 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - U - - - ML 123 122 3 125 3 1 2 47 67 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 124 122 3 125 3 0 0 46 66 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - G - - - ML 126 125 3 128 3 1 1 46 66 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 127 125 3 128 3 0 0 45 65 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - U - - - ML 129 128 3 131 3 1 1 45 65 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 130 128 3 131 3 0 0 44 64 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 132 131 3 134 3 1 1 44 64 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 133 131 3 134 3 0 0 43 63 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - A - - - ML 135 134 3 137 3 1 1 43 63 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 136 134 3 137 3 0 0 42 62 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - g - - - ML 138 137 3 140 3 1 1 42 62 -7.836 -0.023 -6.490 -0.332 -0.456 0.811 -0.469 D 139 137 3 140 3 0 0 41 60 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - G - - - ML 141 140 3 143 3 1 1 41 61 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 142 140 3 143 3 0 0 40 59 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - A - - - ML 144 143 3 146 3 1 1 40 59 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 145 143 3 146 3 0 0 39 58 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - c - - - ML 147 146 3 149 3 1 1 39 58 -7.836 -0.023 -6.490 0.034 0.779 -1.236 -0.259 D 148 146 3 149 3 0 0 38 57 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - A - - - ML 150 149 3 152 3 1 1 38 57 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 151 149 3 152 3 0 0 37 56 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - A - - - ML 153 152 3 155 3 1 1 37 56 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 154 152 3 155 3 0 0 35 55 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - A - - - ML 156 155 3 158 3 1 1 36 55 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 157 155 3 158 3 0 0 34 54 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - a - - - ML 159 158 3 161 3 1 1 35 54 -7.836 -0.023 -6.490 0.997 -0.358 -1.044 -0.435 D 160 158 3 161 3 0 0 33 53 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 53 - g - - - ML 162 161 3 164 3 1 1 34 53 -7.836 -0.023 -6.490 0.168 -1.475 0.979 -0.874 D 163 161 3 164 3 0 0 32 52 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 54 - A - - - ML 165 164 3 167 3 1 1 32 52 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 166 164 3 167 3 0 0 31 51 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - C - - - ML 168 167 3 170 3 1 1 31 51 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 169 167 3 170 3 0 0 30 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - U - - - ML 171 170 3 173 3 1 1 30 49 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 172 170 3 173 3 0 0 29 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - A - - - ML 174 173 3 176 3 1 1 29 48 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - U - - - ML 177 176 3 179 3 1 1 28 47 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 178 176 3 179 3 0 0 27 46 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - G - - - ML 180 179 3 182 3 1 1 27 46 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - G - - - ML 183 182 3 185 3 1 1 26 45 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 184 182 3 185 3 0 0 25 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - U - - - ML 186 185 3 188 3 1 1 25 44 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 187 185 3 188 3 0 0 24 43 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - A - - - ML 189 188 3 191 3 1 1 24 42 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 190 188 3 191 3 0 0 23 42 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - A - - - ML 192 191 3 194 3 1 1 22 41 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - C - - - ML 195 194 3 197 3 1 1 21 40 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - A - - - ML 198 197 3 200 3 1 1 20 39 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - C - - - ML 201 200 3 203 3 1 1 19 38 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 67 - U - - - ML 204 203 3 206 3 1 1 18 36 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 205 203 3 206 3 0 0 17 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - C - - - ML 207 206 3 209 3 1 1 16 35 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - C - - - ML 210 209 3 212 3 1 1 15 33 -7.836 -0.023 -6.490 -1.433 1.529 -2.245 -0.911 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - G - - - ML 213 212 3 215 3 1 1 13 32 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.657 -2.113 -1.771 -1.632 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN61 ACC RF01647 DESC Caenorhabditis snoRNA ceN61 LENG 72 MAXL 161 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 17:03:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01647/CM NSEQ 4 EFFN 1.691406 CKSUM 1321746432 STATS LOCAL MSV -8.0354 0.71873 STATS LOCAL VITERBI -9.1689 0.71873 STATS LOCAL FORWARD -3.6226 0.71873 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.15540 1.58533 1.43987 1.41375 1.38629 1.38629 1.38629 1.38629 0.34735 1.30510 3.80336 0.75096 0.63849 0.00000 * 1 2.38702 2.89994 0.22882 2.85427 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 2 2.63452 1.65227 2.33151 0.44710 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 3 2.87344 0.33746 2.59546 1.86239 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 4 1.27421 2.43332 0.69375 2.01810 6 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 5 0.22518 2.89995 2.65793 2.57039 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 6 2.29777 2.31634 2.79977 0.30102 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 7 2.34326 3.16645 0.22652 2.74059 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 8 0.22518 2.89995 2.65793 2.57039 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 9 2.43747 0.30665 3.00265 2.06312 11 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 10 2.34326 3.16645 0.22652 2.74059 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 11 0.22518 2.89995 2.65793 2.57039 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 12 1.32307 0.86806 2.24141 1.57209 14 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 13 1.90381 0.76562 2.45433 1.20386 15 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 14 0.22518 2.89995 2.65793 2.57039 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 15 0.93107 2.30251 1.03538 1.89200 17 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 16 0.88924 2.29566 1.08832 1.88682 18 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 17 0.22518 2.89995 2.65793 2.57039 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 18 2.34326 3.16645 0.22652 2.74059 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 19 2.29777 2.31634 2.79977 0.30102 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 20 2.29777 2.31634 2.79977 0.30102 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 21 0.22518 2.89995 2.65793 2.57039 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 22 2.29777 2.31634 2.79977 0.30102 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 23 2.43747 0.30665 3.00265 2.06312 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 24 2.43747 0.30665 3.00265 2.06312 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 25 2.43747 0.30665 3.00265 2.06312 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 26 2.29777 2.31634 2.79977 0.30102 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 27 2.34326 3.16645 0.22652 2.74059 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 28 2.29777 2.31634 2.79977 0.30102 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 29 2.43747 0.30665 3.00265 2.06312 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 30 2.29777 2.31634 2.79977 0.30102 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 31 2.34326 3.16645 0.22652 2.74059 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 32 0.22518 2.89995 2.65793 2.57039 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 33 0.22518 2.89995 2.65793 2.57039 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 34 2.29777 2.31634 2.79977 0.30102 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 35 2.34326 3.16645 0.22652 2.74059 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 36 0.22518 2.89995 2.65793 2.57039 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 37 2.29777 2.31634 2.79977 0.30102 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 38 2.29777 2.31634 2.79977 0.30102 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 39 2.34326 3.16645 0.22652 2.74059 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 40 2.29777 2.31634 2.79977 0.30102 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 41 2.34326 3.16645 0.22652 2.74059 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 42 0.22518 2.89995 2.65793 2.57039 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 43 1.63451 1.70560 0.80687 1.73139 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 44 2.34326 3.16645 0.22652 2.74059 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 45 0.22518 2.89995 2.65793 2.57039 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 46 1.36886 0.83012 2.26487 1.58102 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 47 0.22518 2.89995 2.65793 2.57039 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 48 0.22518 2.89995 2.65793 2.57039 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 49 0.22518 2.89995 2.65793 2.57039 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 50 0.68528 1.63433 2.12735 1.70477 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 51 1.27421 2.43332 0.69375 2.01810 53 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 52 0.22518 2.89995 2.65793 2.57039 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 53 2.43747 0.30665 3.00265 2.06312 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 54 2.29777 2.31634 2.79977 0.30102 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 55 0.22518 2.89995 2.65793 2.57039 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 56 2.29777 2.31634 2.79977 0.30102 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 57 2.34326 3.16645 0.22652 2.74059 59 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 58 2.34326 3.16645 0.22652 2.74059 60 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 59 2.29777 2.31634 2.79977 0.30102 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 60 0.22518 2.89995 2.65793 2.57039 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 61 0.22518 2.89995 2.65793 2.57039 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 62 2.43747 0.30665 3.00265 2.06312 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 63 0.22518 2.89995 2.65793 2.57039 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 64 2.43747 0.30665 3.00265 2.06312 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 65 2.29777 2.31634 2.79977 0.30102 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 66 2.43747 0.30665 3.00265 2.06312 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 67 2.43747 0.30665 3.00265 2.06312 69 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 68 2.34326 3.16645 0.22652 2.74059 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 69 0.22518 2.89995 2.65793 2.57039 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 70 2.13983 2.76312 0.29183 2.62645 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 71 0.50958 2.51007 1.48877 2.38230 73 A - - > 1.38629 1.38629 1.38629 1.38629 0.04562 3.80336 3.80336 1.46634 0.26236 1.09861 0.40547 72 3.08941 0.26812 2.73027 2.08385 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.32480 1.28255 * 0.75096 0.63849 0.00000 * //