INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN53 ACC RF01641 DESC Caenorhabditis snoRNA ceN53 STATES 226 NODES 72 CLEN 74 W 91 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 02:38:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01641/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.573242 CKSUM 1415656456 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.10 NC 49.10 EFP7GF -7.5414 0.71869 ECMLC 0.67137 -5.52806 2.91391 1600000 347224 0.003456 ECMGC 0.39757 -16.22227 -2.62958 1600000 88927 0.004498 ECMLI 0.64137 -3.65325 4.76636 1600000 265711 0.004516 ECMGI 0.44329 -9.99723 1.58605 1600000 67932 0.005888 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 91 112 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 IL 1 1 2 1 6 1 28 93 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 28 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 74 u a - - MP 3 2 3 7 6 2 31 91 112 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -2.921 -2.974 -2.949 0.476 0.624 -3.644 1.880 -2.860 -2.981 0.619 -3.450 -1.198 2.396 -3.154 -0.057 -1.974 ML 4 2 3 7 6 1 26 90 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 25 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 21 87 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 27 91 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 73 G C - - MP 9 8 6 13 6 2 29 89 110 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -4.467 -2.964 -4.545 0.379 -4.846 -4.584 -0.277 -4.765 -4.143 3.565 -4.500 -0.655 -0.671 -4.286 -2.301 -3.426 ML 10 8 6 13 6 1 25 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 24 88 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 20 85 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 26 89 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 26 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 72 G C - - MP 15 14 6 19 6 2 27 87 108 -9.051 -8.990 -0.022 -7.766 -8.046 -8.441 -4.467 -2.964 -4.545 0.379 -4.846 -4.584 -0.277 -4.765 -4.143 3.565 -4.500 -0.655 -0.671 -4.286 -2.301 -3.426 ML 16 14 6 19 6 1 24 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 22 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 25 87 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 25 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 71 C G - - MP 21 20 6 25 4 2 25 85 106 -6.794 -7.001 -0.059 -5.415 -4.266 -4.145 -4.002 -0.405 -2.786 -4.451 3.453 -3.567 -4.043 -0.120 -4.333 -2.089 0.755 -4.353 -0.487 -2.894 ML 22 20 6 25 4 1 23 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 21 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 19 84 105 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 24 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 27 26 6 29 3 1 24 83 103 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 28 26 6 29 3 0 19 81 102 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 23 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 30 29 3 32 3 1 23 82 102 -7.822 -0.023 -6.476 0.953 -1.277 0.053 -0.703 D 31 29 3 32 3 0 18 80 101 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 22 81 101 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 34 32 3 35 3 0 17 79 100 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 21 80 100 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 37 35 3 38 3 0 16 78 99 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 21 79 99 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 40 38 3 41 3 0 16 77 98 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 20 78 98 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 43 41 3 44 3 0 15 76 97 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - c - - - ML 45 44 3 47 3 1 19 77 97 -7.822 -0.023 -6.476 -0.649 0.735 -1.430 0.408 D 46 44 3 47 3 0 14 75 96 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 48 47 3 50 3 1 18 76 96 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 49 47 3 50 3 0 13 74 95 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 51 50 3 53 3 1 17 75 95 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 52 50 3 53 3 0 13 73 94 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 54 53 3 56 3 1 16 74 94 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 55 53 3 56 3 0 12 72 93 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 57 56 3 59 3 1 16 73 93 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 58 56 3 59 3 0 11 71 91 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 60 59 3 62 3 1 15 72 92 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 61 59 3 62 3 0 11 70 90 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 63 62 3 65 3 1 14 71 91 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 64 62 3 65 3 0 10 69 89 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 66 65 3 68 3 1 13 69 90 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 67 65 3 68 3 0 9 68 88 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 69 68 3 71 3 1 12 68 89 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 70 68 3 71 3 0 9 67 87 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 72 71 3 74 3 1 11 67 88 -7.822 -0.270 -2.588 1.650 -2.087 -1.747 -1.602 D 73 71 3 74 3 0 8 66 86 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 12 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 75 74 3 77 3 1 12 66 87 -7.579 -0.027 -6.233 -0.815 -0.940 -1.503 1.355 D 76 74 3 77 3 0 7 65 85 -7.375 -0.514 -1.767 IL 77 77 3 77 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 78 77 3 80 3 1 11 65 86 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 79 77 3 80 3 0 5 64 84 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - G - - - ML 81 80 3 83 3 1 10 64 84 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 82 80 3 83 3 0 5 63 83 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 84 83 3 86 3 1 10 63 83 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 85 83 3 86 3 0 4 62 82 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 87 86 3 89 3 1 9 62 82 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 88 86 3 89 3 0 3 61 81 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 90 89 3 92 3 1 8 61 81 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 91 89 3 92 3 0 2 60 80 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 93 92 3 95 3 1 8 60 80 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 94 92 3 95 3 0 2 59 79 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - A - - - ML 96 95 3 98 3 1 7 59 79 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 97 95 3 98 3 0 1 58 78 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 99 98 3 101 3 1 6 58 78 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 100 98 3 101 3 0 0 57 77 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 102 101 3 104 3 1 6 57 77 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 103 101 3 104 3 0 0 56 76 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - C - - - ML 105 104 3 107 3 1 5 56 76 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 106 104 3 107 3 0 0 54 75 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - C - - - ML 108 107 3 110 3 1 5 55 75 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 109 107 3 110 3 0 0 53 73 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 111 110 3 113 3 1 4 54 74 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 112 110 3 113 3 0 0 52 72 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - U - - - ML 114 113 3 116 3 1 4 53 73 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 115 113 3 116 3 0 0 51 71 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 117 116 3 119 3 1 3 52 72 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 118 116 3 119 3 0 0 50 70 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 120 119 3 122 3 1 3 51 70 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 121 119 3 122 3 0 0 49 69 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 123 122 3 125 3 1 2 50 69 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 124 122 3 125 3 0 0 48 68 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - U - - - ML 126 125 3 128 3 1 2 49 68 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 127 125 3 128 3 0 0 47 67 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - G - - - ML 129 128 3 131 3 1 2 48 67 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 130 128 3 131 3 0 0 46 66 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - A - - - ML 132 131 3 134 3 1 1 46 66 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 133 131 3 134 3 0 0 45 65 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - A - - - ML 135 134 3 137 3 1 1 45 65 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 136 134 3 137 3 0 0 44 64 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - c - - - ML 138 137 3 140 3 1 1 44 64 -7.822 -0.023 -6.476 -0.653 0.748 -1.435 0.395 D 139 137 3 140 3 0 0 43 63 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - u - - - ML 141 140 3 143 3 1 1 43 63 -7.822 -0.023 -6.476 0.211 -0.764 -1.057 0.826 D 142 140 3 143 3 0 0 42 62 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - C - - - ML 144 143 3 146 3 1 1 42 62 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 145 143 3 146 3 0 0 41 60 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - u - - - ML 147 146 3 149 3 1 1 41 61 -7.822 -0.023 -6.476 -0.624 0.054 -1.371 0.946 D 148 146 3 149 3 0 0 40 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - g - - - ML 150 149 3 152 3 1 1 40 60 -7.822 -0.023 -6.476 0.336 -1.381 0.825 -0.781 D 151 149 3 152 3 0 0 39 58 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - U - - - ML 153 152 3 155 3 1 1 39 58 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 154 152 3 155 3 0 0 38 57 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - G - - - ML 156 155 3 158 3 1 1 38 57 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 157 155 3 158 3 0 0 37 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - A - - - ML 159 158 3 161 3 1 1 37 56 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 160 158 3 161 3 0 0 36 55 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - G - - - ML 162 161 3 164 3 1 1 36 55 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 163 161 3 164 3 0 0 34 54 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - G - - - ML 165 164 3 167 3 1 1 35 54 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 166 164 3 167 3 0 0 33 53 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 168 167 3 170 3 1 1 34 53 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 169 167 3 170 3 0 0 32 52 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 171 170 3 173 3 1 1 33 52 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 172 170 3 173 3 0 0 31 51 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - g - - - ML 174 173 3 176 3 1 1 31 51 -7.822 -0.023 -6.476 -0.352 -1.023 0.693 0.147 D 175 173 3 176 3 0 0 30 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - u - - - ML 177 176 3 179 3 1 1 30 49 -7.822 -0.023 -6.476 -0.215 -0.059 -0.186 0.378 D 178 176 3 179 3 0 0 29 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - A - - - ML 180 179 3 182 3 1 1 29 48 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 181 179 3 182 3 0 0 28 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - a - - - ML 183 182 3 185 3 1 1 28 47 -7.822 -0.023 -6.476 0.835 -0.880 -0.990 0.225 D 184 182 3 185 3 0 0 27 46 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - A - - - ML 186 185 3 188 3 1 1 27 46 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 187 185 3 188 3 0 0 26 45 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - U - - - ML 189 188 3 191 3 1 1 26 45 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 190 188 3 191 3 0 0 25 44 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - G - - - ML 192 191 3 194 3 1 1 25 44 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 193 191 3 194 3 0 0 24 43 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - A - - - ML 195 194 3 197 3 1 1 24 42 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 196 194 3 197 3 0 0 23 42 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 198 197 3 200 3 1 1 22 41 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 199 197 3 200 3 0 0 21 40 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - A - - - ML 201 200 3 203 3 1 1 21 40 -7.822 -0.023 -6.476 1.650 -2.087 -1.747 -1.602 D 202 200 3 203 3 0 0 20 39 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - G - - - ML 204 203 3 206 3 1 1 20 39 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 205 203 3 206 3 0 0 19 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - G - - - ML 207 206 3 209 3 1 1 19 38 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 208 206 3 209 3 0 0 18 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - U - - - ML 210 209 3 212 3 1 1 18 36 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 211 209 3 212 3 0 0 17 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - C - - - ML 213 212 3 215 3 1 1 16 35 -7.822 -0.023 -6.476 -1.402 1.518 -2.212 -0.886 D 214 212 3 215 3 0 0 16 34 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - U - - - ML 216 215 3 218 3 1 1 15 33 -7.822 -0.023 -6.476 -1.228 -1.271 -1.947 1.536 D 217 215 3 218 3 0 0 15 33 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 69 - G - - - ML 219 218 3 221 3 1 1 13 32 -7.822 -0.023 -6.476 -1.276 -2.446 1.643 -1.831 D 220 218 3 221 3 0 0 13 32 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 70 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.650 -2.087 -1.747 -1.602 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN53 ACC RF01641 DESC Caenorhabditis snoRNA ceN53 LENG 74 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 02:38:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01641/CM NSEQ 3 EFFN 1.678711 CKSUM 1415656456 STATS LOCAL MSV -8.0813 0.71869 STATS LOCAL VITERBI -9.1568 0.71869 STATS LOCAL FORWARD -3.7278 0.71869 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24374 1.62938 1.44838 1.27050 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 0.00000 * 1 2.21566 1.07487 2.01670 0.87591 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 2 2.37605 2.88574 0.23233 2.83730 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 3 2.37236 2.88211 0.23341 2.83200 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 4 2.86233 0.34056 2.58581 1.85688 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 5 0.22699 2.89281 2.65151 2.56259 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 6 0.71540 2.29663 1.34410 1.89957 6 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 7 2.29133 2.31107 2.79295 0.30317 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 8 2.33561 3.15750 0.22866 2.73159 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 9 0.22699 2.89281 2.65151 2.56259 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 10 2.29133 2.31107 2.79295 0.30317 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 11 1.86238 0.85970 2.40750 1.10453 11 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 12 2.33561 3.15750 0.22866 2.73159 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 13 0.22699 2.89281 2.65151 2.56259 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 14 0.22699 2.89281 2.65151 2.56259 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 15 2.29133 2.31107 2.79295 0.30317 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 16 2.29133 2.31107 2.79295 0.30317 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 17 0.22699 2.89281 2.65151 2.56259 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 18 2.29133 2.31107 2.79295 0.30317 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 19 2.42899 0.30943 2.99380 2.05640 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 20 0.22699 2.89281 2.65151 2.56259 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.24467 3.80271 1.63614 1.46634 0.26236 1.09861 0.40547 21 1.99025 2.06814 2.46999 0.42720 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05542 3.61346 3.61346 1.46634 0.26236 0.20632 1.67973 22 2.29133 2.31107 2.79295 0.30317 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 23 2.33561 3.15750 0.22866 2.73159 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 24 0.22699 2.89281 2.65151 2.56259 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 25 2.33561 3.15750 0.22866 2.73159 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 26 2.42899 0.30943 2.99380 2.05640 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 27 2.42899 0.30943 2.99380 2.05640 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 28 0.22699 2.89281 2.65151 2.56259 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 29 0.22699 2.89281 2.65151 2.56259 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 30 2.29133 2.31107 2.79295 0.30317 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 31 2.42899 0.30943 2.99380 2.05640 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 32 2.42899 0.30943 2.99380 2.05640 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 33 2.29133 2.31107 2.79295 0.30317 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 34 2.29133 2.31107 2.79295 0.30317 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 35 2.29133 2.31107 2.79295 0.30317 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 36 2.29133 2.31107 2.79295 0.30317 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 37 2.42899 0.30943 2.99380 2.05640 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 38 2.29133 2.31107 2.79295 0.30317 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 39 2.33561 3.15750 0.22866 2.73159 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 40 0.22699 2.89281 2.65151 2.56259 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 41 0.22699 2.89281 2.65151 2.56259 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 42 1.86565 0.85021 2.41129 1.11419 42 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 43 1.24145 1.93137 2.13718 0.80274 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 44 2.42899 0.30943 2.99380 2.05640 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 45 1.84316 1.34396 2.36337 0.71997 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 46 1.15388 2.37191 0.79848 1.95703 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 47 2.29133 2.31107 2.79295 0.30317 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 48 2.33561 3.15750 0.22866 2.73159 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 49 0.22699 2.89281 2.65151 2.56259 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 50 2.33561 3.15750 0.22866 2.73159 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 51 2.33561 3.15750 0.22866 2.73159 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 52 0.22699 2.89281 2.65151 2.56259 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 53 2.29133 2.31107 2.79295 0.30317 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 54 1.64845 2.11509 0.88896 1.28755 54 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 55 1.54600 1.42251 1.50994 1.12433 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 56 0.22699 2.89281 2.65151 2.56259 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 57 0.79869 2.01053 2.08885 1.22985 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 58 0.22699 2.89281 2.65151 2.56259 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 59 2.29133 2.31107 2.79295 0.30317 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 60 2.33561 3.15750 0.22866 2.73159 60 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 61 0.22699 2.89281 2.65151 2.56259 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 62 2.29133 2.31107 2.79295 0.30317 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 63 0.22699 2.89281 2.65151 2.56259 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 64 2.33561 3.15750 0.22866 2.73159 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 65 2.33561 3.15750 0.22866 2.73159 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 66 2.29133 2.31107 2.79295 0.30317 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 67 2.42899 0.30943 2.99380 2.05640 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 68 2.29133 2.31107 2.79295 0.30317 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 69 2.33561 3.15750 0.22866 2.73159 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 70 0.22699 2.89281 2.65151 2.56259 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 71 2.13308 2.75306 0.29470 2.61679 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 72 3.05770 0.27300 2.71291 2.07490 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 73 3.06704 0.27182 2.71656 2.07668 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04565 3.80271 3.80271 1.46634 0.26236 1.09861 0.40547 74 0.79286 2.18285 1.20607 1.99983 74 a - - > 1.38629 1.38629 1.38629 1.38629 0.02308 3.78014 * 1.46634 0.26236 0.00000 * //