# STOCKHOLM 1.0
#=GF ID ceN49
#=GF AC RF01639
#=GF DE Caenorhabditis snoRNA ceN49
#=GF AU Osuch I
#=GF GA 65.0
#=GF NC 59.4
#=GF TC 66.9
#=GF SE INFERNAL
#=GF SS Predicted; RNAalifold;
#=GF TP Gene; snRNA; snoRNA; HACA-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 26.98 -Z 2958934 CM SEQDB
#=GF DR SO; 0000594; H_ACA_box_snoRNA;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF RN [1]
#=GF RM 17903271
#=GF RT Systematic identification of non-coding RNA 2,2,7-trimethylguanosine cap
#=GF RT structures in Caenorhabditis elegans.
#=GF RA Jia D, Cai L, He H, Skogerbo G, Li T, Aftab MN, Chen R
#=GF RL BMC Mol Biol. 2007;8:86.
#=GF WK Small_nucleolar_RNA
#=GF SQ 3

DQ789461.1/2-136         UCCGCCUCUCUACCAAACACUCGUAAGUACUAUUUAUUGCGAGUGCAUGGAAGAGGCGAAUAGAGAACGGAACGUUGUCCACCCCUUCAAUCAUC-AUCAAAUUGGAUUGCGGGCACUUUACCACGGUCGACAUUU
AAGD02001955.1/2837-2971 UACGCCUCUCUACCAAACACUUACAAGUUCUGUUUAUUGUGAGUGCAUGGAAGAGGCGAAUAGAAAACGGAACGAUGUCCACCCCUUCAAUCAUCAGAA-AAUUGGAUUGCGGGCACUUUACCUCGGUCGACAGUU
AY948685.1/1-134         ACCGCCUCUCUACCAAACACUUGCAAGUUCUGUUUAUUGCAAGUGCAUGGAAGAGGCGAAUAGAAAACGGAAUGAUGUCCACUCCUUCGAUUAUC-GUU-CAUUGGAUUGCGGGCACUUUACCUCGUUCGACAUUU
#=GC SS_cons             ::<<<<<<<---<<<--<<<<<<<<<__________>>>>>>>>>-->>>->>>>>>>:::::::::::<<-<<<-<<-----<<<-<<<<<___.___._____>>>>>->>>------>>->>>->>:::::::
#=GC RF                  ucCGCCuCuCUACCaAACaCucgcaaGUuCUgUUUAuugcgaGuGCAuGGAaGaGGCGAAUAGAaAACGGaAcGaUGuCCACcCCuUCaaucAUC.guu.aAUUGgauuGCgGGCACUUUaCCuCgguCGACAuUU
//
