INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN44 ACC RF01634 DESC Caenorhabditis snoRNA ceN44 STATES 226 NODES 73 CLEN 74 W 91 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 16:39:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01634/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.526367 CKSUM 15279289 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 88.20 NC 54.10 EFP7GF -7.6166 0.71876 ECMLC 0.67794 -5.52709 2.86007 1600000 353636 0.003393 ECMGC 0.35562 -18.58833 -3.19086 1600000 95527 0.004187 ECMLI 0.65348 -3.32673 4.67443 1600000 223846 0.005361 ECMGI 0.41737 -11.03925 1.07097 1600000 62683 0.006381 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 91 112 -6.773 -6.980 -0.322 -2.449 IL 1 1 2 1 4 1 30 95 116 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 30 94 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - g - - - ML 3 2 3 5 3 1 30 91 112 -7.993 -0.024 -6.311 -0.127 0.075 0.146 -0.113 D 4 2 3 5 3 0 25 90 110 -6.417 -1.531 -0.639 IL 5 5 3 5 3 1 29 92 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 74 - G - - MR 6 5 3 8 3 1 29 90 111 -7.993 -0.024 -6.311 -0.762 -1.831 1.433 -1.218 D 7 5 3 8 3 0 24 89 109 -7.404 -2.582 -0.274 IR 8 8 3 8 3 1 28 91 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 73 - A - - MR 9 8 3 11 5 1 28 89 110 -6.759 -0.049 -6.574 -6.786 -7.678 1.485 -1.609 -1.316 -1.086 D 10 8 3 11 5 0 23 88 109 -6.004 -0.408 -3.631 -5.062 -3.056 IR 11 11 3 11 5 1 26 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 72 G C - - MP 12 11 3 16 6 2 28 88 109 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -4.429 -2.946 -4.504 0.404 -4.792 -4.567 -0.232 -4.721 -4.116 3.553 -4.477 -0.636 -0.627 -4.261 -2.254 -3.386 ML 13 11 3 16 6 1 24 87 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 23 87 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 19 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 25 88 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 25 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 71 A U - - MP 18 17 6 22 6 2 26 86 107 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -3.536 -2.636 -3.571 3.135 -3.784 -4.827 0.500 -3.628 -3.476 1.356 -4.010 -0.157 0.081 -4.056 -1.443 -2.422 ML 19 17 6 22 6 1 23 85 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 21 85 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 18 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 24 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 24 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 70 C G - - MP 24 23 6 28 4 2 24 84 105 -6.773 -6.980 -0.060 -5.394 -4.227 -4.102 -3.970 -0.366 -2.763 -4.423 3.437 -3.540 -4.010 -0.074 -4.304 -2.046 0.781 -4.316 -0.464 -2.862 ML 25 23 6 28 4 1 22 84 105 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 19 84 105 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 18 83 104 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 23 86 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 23 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - u - - - ML 30 29 6 32 3 1 23 82 103 -7.802 -0.023 -6.456 0.256 -0.035 -0.954 0.394 D 31 29 6 32 3 0 17 81 101 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - A - - - ML 33 32 3 35 3 1 22 81 102 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 34 32 3 35 3 0 17 79 100 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 21 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - U - - - ML 36 35 3 38 3 1 21 80 100 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 37 35 3 38 3 0 16 78 99 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - G - - - ML 39 38 3 41 3 1 20 79 99 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 40 38 3 41 3 0 15 77 98 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - A - - - ML 42 41 3 44 3 1 20 78 98 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 43 41 3 44 3 0 14 76 97 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - U - - - ML 45 44 3 47 3 1 19 77 97 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 46 44 3 47 3 0 13 75 96 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - A - - - ML 48 47 3 50 3 1 18 76 96 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 49 47 3 50 3 0 13 74 95 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - G - - - ML 51 50 3 53 3 1 17 75 95 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 52 50 3 53 3 0 12 73 94 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - G - - - ML 54 53 3 56 3 1 17 74 94 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 55 53 3 56 3 0 11 72 93 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - A - - - ML 57 56 3 59 3 1 16 73 93 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 58 56 3 59 3 0 10 71 92 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - U - - - ML 60 59 3 62 3 1 15 72 92 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 61 59 3 62 3 0 10 70 91 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 63 62 3 65 3 1 14 71 91 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 64 62 3 65 3 0 9 69 89 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - A - - - ML 66 65 3 68 3 1 14 70 90 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 67 65 3 68 3 0 8 68 88 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - C - - - ML 69 68 3 71 3 1 13 69 89 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 70 68 3 71 3 0 7 67 87 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - C - - - ML 72 71 3 74 3 1 12 68 88 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 73 71 3 74 3 0 7 66 86 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - U - - - ML 75 74 3 77 3 1 12 66 87 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 76 74 3 77 3 0 6 65 85 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - A - - - ML 78 77 3 80 3 1 11 65 86 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 79 77 3 80 3 0 5 64 84 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - G - - - ML 81 80 3 83 3 1 10 64 84 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 82 80 3 83 3 0 4 63 83 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 84 83 3 86 3 1 10 63 83 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 85 83 3 86 3 0 4 62 82 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 87 86 3 89 3 1 9 62 82 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 88 86 3 89 3 0 3 61 81 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - U - - - ML 90 89 3 92 3 1 8 61 81 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 91 89 3 92 3 0 2 60 80 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - C - - - ML 93 92 3 95 3 1 8 60 80 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 94 92 3 95 3 0 2 59 79 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - U - - - ML 96 95 3 98 3 1 7 59 79 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 97 95 3 98 3 0 1 58 78 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - C - - - ML 99 98 3 101 3 1 6 58 78 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 100 98 3 101 3 0 0 57 77 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 29 - U - - - ML 102 101 3 104 3 1 6 57 77 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 103 101 3 104 3 0 0 56 76 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 30 - G - - - ML 105 104 3 107 3 1 5 56 76 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 106 104 3 107 3 0 0 55 75 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 31 - A - - - ML 108 107 3 110 3 1 5 55 75 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 109 107 3 110 3 0 0 53 73 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 32 - A - - - ML 111 110 3 113 3 1 4 54 74 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 112 110 3 113 3 0 0 52 72 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 33 - C - - - ML 114 113 3 116 3 1 4 53 73 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 115 113 3 116 3 0 0 51 71 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 34 - C - - - ML 117 116 3 119 3 1 3 52 72 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 118 116 3 119 3 0 0 50 70 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 35 - A - - - ML 120 119 3 122 3 1 3 51 70 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 121 119 3 122 3 0 0 49 69 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 36 - U - - - ML 123 122 3 125 3 1 2 50 69 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 124 122 3 125 3 0 0 48 68 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 37 - U - - - ML 126 125 3 128 3 1 2 49 68 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 127 125 3 128 3 0 0 47 67 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 38 - U - - - ML 129 128 3 131 3 1 2 48 67 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 130 128 3 131 3 0 0 46 66 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 39 - C - - - ML 132 131 3 134 3 1 1 46 66 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 133 131 3 134 3 0 0 45 65 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 40 - G - - - ML 135 134 3 137 3 1 1 45 65 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 136 134 3 137 3 0 0 44 64 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 41 - U - - - ML 138 137 3 140 3 1 1 44 64 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 139 137 3 140 3 0 0 43 63 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 42 - G - - - ML 141 140 3 143 3 1 1 43 63 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 142 140 3 143 3 0 0 42 62 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 43 - U - - - ML 144 143 3 146 3 1 1 42 62 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 145 143 3 146 3 0 0 41 61 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 44 - U - - - ML 147 146 3 149 3 1 1 41 61 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 148 146 3 149 3 0 0 40 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 45 - U - - - ML 150 149 3 152 3 1 1 40 60 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 151 149 3 152 3 0 0 39 58 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 46 - G - - - ML 153 152 3 155 3 1 1 39 58 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 154 152 3 155 3 0 0 38 57 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 47 - c - - - ML 156 155 3 158 3 1 1 38 57 -7.802 -0.023 -6.456 -0.631 0.720 -1.409 0.412 D 157 155 3 158 3 0 0 37 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 48 - A - - - ML 159 158 3 161 3 1 1 37 56 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 160 158 3 161 3 0 0 36 55 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 49 - c - - - ML 162 161 3 164 3 1 1 36 55 -7.802 -0.023 -6.456 0.270 0.549 -1.102 -0.209 D 163 161 3 164 3 0 0 34 54 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 50 - A - - - ML 165 164 3 167 3 1 1 35 54 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 166 164 3 167 3 0 0 33 53 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 51 - A - - - ML 168 167 3 170 3 1 1 34 53 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 169 167 3 170 3 0 0 32 52 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 52 - A - - - ML 171 170 3 173 3 1 1 33 52 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 172 170 3 173 3 0 0 31 51 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 53 - C - - - ML 174 173 3 176 3 1 1 31 51 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 175 173 3 176 3 0 0 30 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 54 - A - - - ML 177 176 3 179 3 1 1 30 49 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 178 176 3 179 3 0 0 29 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 55 - A - - - ML 180 179 3 182 3 1 1 29 48 -7.802 -0.023 -6.456 1.639 -2.048 -1.712 -1.560 D 181 179 3 182 3 0 0 28 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 56 - U - - - ML 183 182 3 185 3 1 1 28 47 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 184 182 3 185 3 0 0 27 46 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 57 - G - - - ML 186 185 3 188 3 1 1 27 46 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 187 185 3 188 3 0 0 26 45 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 58 - C - - - ML 189 188 3 191 3 1 1 26 45 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 190 188 3 191 3 0 0 25 44 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 59 - U - - - ML 192 191 3 194 3 1 1 25 44 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 193 191 3 194 3 0 0 24 43 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 60 - C - - - ML 195 194 3 197 3 1 1 24 43 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 196 194 3 197 3 0 0 23 42 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 61 - u - - - ML 198 197 3 200 3 1 1 22 41 -7.802 -0.023 -6.456 -0.606 0.062 -1.352 0.931 D 199 197 3 200 3 0 0 21 40 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 62 - U - - - ML 201 200 3 203 3 1 1 21 40 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 202 200 3 203 3 0 0 20 39 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 63 - U - - - ML 204 203 3 206 3 1 1 20 39 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 205 203 3 206 3 0 0 19 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 64 - G - - - ML 207 206 3 209 3 1 1 19 38 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 208 206 3 209 3 0 0 18 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 65 - U - - - ML 210 209 3 212 3 1 1 18 36 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 211 209 3 212 3 0 0 17 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 66 - C - - - ML 213 212 3 215 3 1 1 16 35 -7.802 -0.023 -6.456 -1.356 1.501 -2.163 -0.849 D 214 212 3 215 3 0 0 16 34 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 67 - U - - - ML 216 215 3 218 3 1 1 15 33 -7.802 -0.023 -6.456 -1.193 -1.242 -1.909 1.523 D 217 215 3 218 3 0 0 15 33 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 68 - G - - - ML 219 218 3 221 3 1 1 13 32 -7.802 -0.023 -6.456 -1.234 -2.396 1.630 -1.781 D 220 218 3 221 3 0 0 13 32 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 69 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.639 -2.048 -1.712 -1.560 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN44 ACC RF01634 DESC Caenorhabditis snoRNA ceN44 LENG 74 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 16:39:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01634/CM NSEQ 3 EFFN 1.596680 CKSUM 15279289 STATS LOCAL MSV -7.6266 0.71876 STATS LOCAL VITERBI -9.1450 0.71876 STATS LOCAL FORWARD -3.6228 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24967 1.56636 1.51581 1.25538 1.38629 1.38629 1.38629 1.38629 0.23284 3.78023 1.68793 1.46634 0.26236 0.00000 * 1 1.48259 1.32848 1.27758 1.47246 1 g - - : 1.38629 1.38629 1.38629 1.38629 0.05600 3.60339 3.60339 1.46634 0.26236 0.22058 1.61974 2 2.31816 2.80730 0.25220 2.74749 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 3 0.54414 2.32691 1.51848 2.27286 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 4 2.80016 0.35986 2.52729 1.82294 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 5 1.20846 1.40654 2.05646 1.11338 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 6 0.23922 2.84618 2.60957 2.51170 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 7 2.24940 2.27679 2.74844 0.31760 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 8 2.28556 3.09882 0.24321 2.67264 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 9 0.23922 2.84618 2.60957 2.51170 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 10 2.24940 2.27679 2.74844 0.31760 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 11 0.23922 2.84618 2.60957 2.51170 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 12 2.28556 3.09882 0.24321 2.67264 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 13 2.28556 3.09882 0.24321 2.67264 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 14 0.23922 2.84618 2.60957 2.51170 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 15 2.24940 2.27679 2.74844 0.31760 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 16 0.23922 2.84618 2.60957 2.51170 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 17 0.23922 2.84618 2.60957 2.51170 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 18 2.37384 0.32825 2.93607 2.01273 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 19 2.37384 0.32825 2.93607 2.01273 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 20 2.24940 2.27679 2.74844 0.31760 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 21 0.23922 2.84618 2.60957 2.51170 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 22 2.28556 3.09882 0.24321 2.67264 22 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 23 0.23922 2.84618 2.60957 2.51170 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 24 2.28556 3.09882 0.24321 2.67264 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 25 2.24940 2.27679 2.74844 0.31760 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 26 2.37384 0.32825 2.93607 2.01273 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 27 2.24940 2.27679 2.74844 0.31760 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 28 2.37384 0.32825 2.93607 2.01273 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 29 2.24940 2.27679 2.74844 0.31760 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 30 2.28556 3.09882 0.24321 2.67264 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 31 0.23922 2.84618 2.60957 2.51170 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 32 0.23922 2.84618 2.60957 2.51170 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 33 2.37384 0.32825 2.93607 2.01273 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 34 2.37384 0.32825 2.93607 2.01273 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 35 0.23922 2.84618 2.60957 2.51170 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 36 2.24940 2.27679 2.74844 0.31760 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 37 2.24940 2.27679 2.74844 0.31760 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 38 2.24940 2.27679 2.74844 0.31760 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 39 2.37384 0.32825 2.93607 2.01273 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 40 2.28556 3.09882 0.24321 2.67264 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 41 2.24940 2.27679 2.74844 0.31760 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 42 2.28556 3.09882 0.24321 2.67264 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 43 2.24940 2.27679 2.74844 0.31759 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 44 2.24940 2.27679 2.74844 0.31759 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 45 2.24940 2.27679 2.74844 0.31760 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 46 2.28556 3.09882 0.24321 2.67264 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 47 1.84129 0.87515 2.38342 1.10155 47 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 48 0.23922 2.84618 2.60957 2.51170 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 49 1.19980 0.99394 2.16494 1.54237 49 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 50 0.23922 2.84618 2.60957 2.51170 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 51 0.23922 2.84618 2.60957 2.51170 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 52 0.23922 2.84618 2.60957 2.51170 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 53 2.37384 0.32825 2.93607 2.01273 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 54 0.23922 2.84618 2.60957 2.51170 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 55 0.23922 2.84618 2.60957 2.51170 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 56 2.24940 2.27679 2.74844 0.31759 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 57 2.28556 3.09882 0.24321 2.67264 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 58 2.37384 0.32825 2.93607 2.01273 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 59 2.24940 2.27679 2.74844 0.31760 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 60 2.37384 0.32825 2.93607 2.01273 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 61 1.82282 1.33976 2.34146 0.73327 61 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 62 2.24940 2.27679 2.74844 0.31760 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 63 2.24940 2.27679 2.74844 0.31759 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 64 2.28556 3.09882 0.24321 2.67264 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 65 2.24940 2.27679 2.74844 0.31760 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 66 2.37384 0.32825 2.93607 2.01273 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 67 2.24940 2.27679 2.74844 0.31760 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 68 2.28556 3.09882 0.24321 2.67264 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 69 0.23922 2.84618 2.60957 2.51170 69 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 70 2.09626 2.69567 0.31109 2.56474 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 71 2.50787 1.76917 2.14609 0.46022 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.04671 3.78023 3.78023 1.46634 0.26236 1.09861 0.40547 72 2.98445 0.28887 2.65176 2.04181 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.23284 3.78023 1.68793 1.46634 0.26236 1.09861 0.40547 73 0.34412 2.53192 2.32613 2.17177 73 A - - : 1.38629 1.38629 1.38629 1.38629 0.05600 3.60339 3.60339 1.46634 0.26236 2.31289 0.10422 74 1.94688 2.69505 0.37636 2.26927 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.02839 3.57578 * 1.46634 0.26236 0.00000 * //