INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN22 ACC RF01622 DESC Nematode snoRNA ceN22 STATES 232 NODES 74 CLEN 76 W 93 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 22:06:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01622/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.371094 CKSUM 3826619893 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.00 NC 38.70 EFP7GF -7.4853 0.71926 ECMLC 0.66018 -6.09588 2.56649 1600000 365434 0.003284 ECMGC 0.38977 -16.58086 -2.70522 1600000 89298 0.004479 ECMLI 0.60740 -4.25996 4.23693 1600000 209207 0.005736 ECMGI 0.44299 -10.00002 1.43988 1600000 63528 0.006296 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 93 114 -6.699 -6.906 -0.063 -5.320 IL 1 1 2 1 4 1 32 97 118 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 31 96 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 31 93 114 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 4 2 3 5 3 0 26 92 113 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 31 95 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 30 92 113 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 7 5 3 8 3 0 25 91 112 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 30 94 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 30 91 112 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 10 8 3 11 3 0 24 90 111 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 29 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 29 90 111 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 13 11 3 14 3 0 24 89 109 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 28 92 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 28 89 110 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 16 14 3 17 3 0 23 88 108 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 27 91 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 27 88 109 -8.141 -0.022 -6.459 1.599 -1.915 -1.593 -1.416 D 19 17 3 20 3 0 22 87 108 -5.620 -0.734 -1.403 IL 20 20 3 20 3 1 26 89 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 76 - A - - MR 21 20 3 23 5 1 27 87 108 -6.895 -0.045 -6.710 -6.923 -7.814 1.599 -1.915 -1.593 -1.416 D 22 20 3 23 5 0 20 86 106 -5.352 -0.707 -2.978 -4.409 -2.404 IR 23 23 3 23 5 1 24 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 75 G C - - MP 24 23 3 28 6 2 27 86 107 -9.017 -8.957 -0.022 -7.733 -8.013 -8.408 -4.298 -2.885 -4.366 0.487 -4.607 -4.512 -0.078 -4.569 -4.023 3.510 -4.394 -0.572 -0.478 -4.173 -2.094 -3.251 ML 25 23 3 28 6 1 22 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 3 28 6 1 21 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 3 28 6 0 17 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 23 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 23 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 74 g c - - MP 30 29 6 34 6 2 25 84 105 -9.017 -8.957 -0.022 -7.733 -8.013 -8.408 -3.357 -2.412 -3.403 1.954 -3.690 -4.244 0.674 -3.639 -3.380 2.774 -3.848 -0.055 0.347 -3.542 -1.283 -2.310 ML 31 29 6 34 6 1 21 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 20 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 16 80 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 22 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 22 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 73 C G - - MP 36 35 6 40 6 2 23 82 103 -9.017 -8.957 -0.022 -7.733 -8.013 -8.408 -4.099 -3.959 -3.861 -0.238 -2.688 -4.331 3.382 -3.451 -3.899 0.080 -4.205 -1.902 0.867 -4.195 -0.387 -2.756 ML 37 35 6 40 6 1 20 81 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 18 81 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 16 79 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 21 82 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 21 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 72 C G - - MP 42 41 6 46 4 2 21 80 101 -6.699 -6.906 -0.063 -5.320 -4.099 -3.959 -3.861 -0.238 -2.688 -4.331 3.382 -3.451 -3.899 0.080 -4.205 -1.902 0.867 -4.195 -0.387 -2.756 ML 43 41 6 46 4 1 19 80 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 17 80 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 15 79 99 -4.568 -4.250 -2.265 -0.520 IL 46 46 5 46 4 1 20 81 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 48 47 6 50 3 1 20 78 98 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 49 47 6 50 3 0 15 76 97 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - G - - - ML 51 50 3 53 3 1 19 77 97 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 52 50 3 53 3 0 14 75 96 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 54 53 3 56 3 1 18 76 96 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 55 53 3 56 3 0 13 74 95 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - G - - - ML 57 56 3 59 3 1 17 75 95 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 58 56 3 59 3 0 13 73 94 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 60 59 3 62 3 1 17 74 94 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 61 59 3 62 3 0 12 72 93 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 63 62 3 65 3 1 16 73 93 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 64 62 3 65 3 0 11 71 92 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - G - - - ML 66 65 3 68 3 1 15 72 92 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 67 65 3 68 3 0 10 70 91 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 69 68 3 71 3 1 14 71 91 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 70 68 3 71 3 0 10 69 90 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - A - - - ML 72 71 3 74 3 1 13 70 90 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 73 71 3 74 3 0 9 68 88 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 75 74 3 77 3 1 12 69 89 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 76 74 3 77 3 0 8 67 87 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - C - - - ML 78 77 3 80 3 1 11 67 88 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 79 77 3 80 3 0 8 66 86 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 81 80 3 83 3 1 11 66 87 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 82 80 3 83 3 0 7 65 85 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - G - - - ML 84 83 3 86 3 1 10 65 86 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 85 83 3 86 3 0 7 64 84 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 87 86 3 89 3 1 9 64 85 -7.735 -0.374 -2.159 -1.075 -1.147 -1.783 1.477 D 88 86 3 89 3 0 6 63 83 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 10 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - U - - - ML 90 89 3 92 3 1 9 63 84 -7.391 -0.031 -6.045 -0.519 -0.715 -1.176 1.170 D 91 89 3 92 3 0 5 62 82 -7.592 -0.431 -1.983 IL 92 92 3 92 3 1 8 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - C - - - ML 93 92 3 95 3 1 9 62 83 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 94 92 3 95 3 0 3 61 81 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 8 64 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - U - - - ML 96 95 3 98 3 1 8 61 81 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 97 95 3 98 3 0 2 60 80 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 7 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - A - - - ML 99 98 3 101 3 1 7 60 80 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 100 98 3 101 3 0 2 59 79 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - G - - - ML 102 101 3 104 3 1 7 59 79 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 103 101 3 104 3 0 1 58 78 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - G - - - ML 105 104 3 107 3 1 6 58 78 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 106 104 3 107 3 0 0 57 77 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - A - - - ML 108 107 3 110 3 1 6 57 77 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 109 107 3 110 3 0 0 56 76 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - A - - - ML 111 110 3 113 3 1 5 56 76 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 112 110 3 113 3 0 0 55 75 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - G - - - ML 114 113 3 116 3 1 4 55 75 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 115 113 3 116 3 0 0 54 74 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - U - - - ML 117 116 3 119 3 1 4 54 74 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 118 116 3 119 3 0 0 52 73 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - G - - - ML 120 119 3 122 3 1 3 53 73 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 121 119 3 122 3 0 0 51 71 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - C - - - ML 123 122 3 125 3 1 3 52 72 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 124 122 3 125 3 0 0 50 70 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - C - - - ML 126 125 3 128 3 1 3 51 71 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 127 125 3 128 3 0 0 49 69 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - G - - - ML 129 128 3 131 3 1 2 50 70 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 130 128 3 131 3 0 0 48 68 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - U - - - ML 132 131 3 134 3 1 2 49 68 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 133 131 3 134 3 0 0 47 67 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - C - - - ML 135 134 3 137 3 1 2 48 67 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 136 134 3 137 3 0 0 46 66 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 41 - U - - - ML 138 137 3 140 3 1 1 47 66 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 139 137 3 140 3 0 0 45 65 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 42 - U - - - ML 141 140 3 143 3 1 1 46 65 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 142 140 3 143 3 0 0 44 64 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 43 - A - - - ML 144 143 3 146 3 1 1 44 64 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 145 143 3 146 3 0 0 43 63 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 44 - G - - - ML 147 146 3 149 3 1 1 43 63 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 148 146 3 149 3 0 0 42 62 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 45 - A - - - ML 150 149 3 152 3 1 1 42 62 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 151 149 3 152 3 0 0 41 61 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 46 - A - - - ML 153 152 3 155 3 1 1 41 61 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 154 152 3 155 3 0 0 40 60 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 47 - A - - - ML 156 155 3 158 3 1 1 40 60 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 157 155 3 158 3 0 0 39 58 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 48 - C - - - ML 159 158 3 161 3 1 1 39 59 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 160 158 3 161 3 0 0 38 57 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 49 - A - - - ML 162 161 3 164 3 1 1 38 57 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 163 161 3 164 3 0 0 37 56 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 50 - A - - - ML 165 164 3 167 3 1 1 37 56 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 166 164 3 167 3 0 0 36 55 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 51 - U - - - ML 168 167 3 170 3 1 1 36 55 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 169 167 3 170 3 0 0 35 54 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 52 - G - - - ML 171 170 3 173 3 1 1 35 54 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 172 170 3 173 3 0 0 33 53 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 53 - A - - - ML 174 173 3 176 3 1 1 34 53 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 175 173 3 176 3 0 0 32 52 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 54 - U - - - ML 177 176 3 179 3 1 1 33 52 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 178 176 3 179 3 0 0 31 51 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 55 - U - - - ML 180 179 3 182 3 1 1 31 51 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 181 179 3 182 3 0 0 30 50 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 56 - A - - - ML 183 182 3 185 3 1 1 30 50 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 184 182 3 185 3 0 0 29 48 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 57 - U - - - ML 186 185 3 188 3 1 1 29 48 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 187 185 3 188 3 0 0 28 47 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 58 - a - - - ML 189 188 3 191 3 1 1 28 47 -7.735 -0.024 -6.389 0.658 -1.207 0.416 -0.612 D 190 188 3 191 3 0 0 27 46 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 59 - a - - - ML 192 191 3 194 3 1 1 27 46 -7.735 -0.024 -6.389 0.573 0.175 -0.966 -0.198 D 193 191 3 194 3 0 0 26 45 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 60 - A - - - ML 195 194 3 197 3 1 1 26 45 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 196 194 3 197 3 0 0 25 44 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 61 - U - - - ML 198 197 3 200 3 1 1 25 44 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 199 197 3 200 3 0 0 24 43 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 62 - U - - - ML 201 200 3 203 3 1 1 24 43 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 202 200 3 203 3 0 0 23 42 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 63 - G - - - ML 204 203 3 206 3 1 1 23 41 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 205 203 3 206 3 0 0 21 40 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 64 - G - - - ML 207 206 3 209 3 1 1 21 40 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 208 206 3 209 3 0 0 20 39 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 65 - A - - - ML 210 209 3 212 3 1 1 20 39 -7.735 -0.024 -6.389 1.599 -1.915 -1.593 -1.416 D 211 209 3 212 3 0 0 19 38 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 66 - C - - - ML 213 212 3 215 3 1 1 19 38 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 214 212 3 215 3 0 0 18 37 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 67 - G - - - ML 216 215 3 218 3 1 1 18 36 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 217 215 3 218 3 0 0 17 36 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 68 - C - - - ML 219 218 3 221 3 1 1 16 35 -7.735 -0.024 -6.389 -1.202 1.439 -2.001 -0.728 D 220 218 3 221 3 0 0 16 34 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 69 - U - - - ML 222 221 3 224 3 1 1 15 33 -7.735 -0.024 -6.389 -1.075 -1.147 -1.783 1.477 D 223 221 3 224 3 0 0 15 33 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 70 - G - - - ML 225 224 3 227 3 1 1 13 32 -7.735 -0.024 -6.389 -1.091 -2.227 1.580 -1.612 D 226 224 3 227 3 0 0 13 32 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 71 - A - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 1.599 -1.915 -1.593 -1.416 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN22 ACC RF01622 DESC Nematode snoRNA ceN22 LENG 76 MAXL 168 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 22:06:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01622/CM NSEQ 2 EFFN 1.433594 CKSUM 3826619893 STATS LOCAL MSV -8.7219 0.71926 STATS LOCAL VITERBI -9.3597 0.71926 STATS LOCAL FORWARD -3.2492 0.71926 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21582 1.67124 1.33795 1.37383 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.26654 2.75106 2.52397 2.40821 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.16453 2.20776 2.65793 0.34934 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.16453 2.20776 2.65793 0.34934 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.18307 2.97790 0.27651 2.55130 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.26258 0.37056 2.81889 1.92482 5 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.26654 2.75106 2.52397 2.40821 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.27616 2.71900 0.27164 2.66994 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 1.31341 2.19335 0.69923 2.09891 8 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.72312 0.39359 2.42808 1.76321 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.72319 0.39358 2.42811 1.76322 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.18307 2.97790 0.27651 2.55130 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.18307 2.97790 0.27651 2.55130 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.16453 2.20776 2.65793 0.34934 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.18307 2.97790 0.27651 2.55130 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.26654 2.75106 2.52397 2.40821 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.16453 2.20776 2.65793 0.34934 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.18307 2.97790 0.27651 2.55130 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.26654 2.75106 2.52397 2.40821 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.26654 2.75106 2.52397 2.40821 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.26654 2.75106 2.52397 2.40821 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.26258 0.37056 2.81889 1.92482 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.16453 2.20776 2.65793 0.34934 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.18307 2.97790 0.27651 2.55130 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.16453 2.20776 2.65793 0.34934 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.33430 3.73767 1.34573 1.46634 0.26236 1.09861 0.40547 25 1.76475 1.89559 2.22234 0.56179 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06440 3.46778 3.46778 1.46634 0.26236 0.16797 1.86676 26 2.26258 0.37056 2.81889 1.92482 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.16453 2.20776 2.65793 0.34934 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.26654 2.75106 2.52397 2.40821 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.18307 2.97790 0.27651 2.55130 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.18307 2.97790 0.27651 2.55130 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.26654 2.75106 2.52397 2.40821 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.26654 2.75106 2.52397 2.40821 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.18307 2.97790 0.27651 2.55130 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.16453 2.20776 2.65793 0.34934 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.18307 2.97790 0.27651 2.55130 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.26258 0.37056 2.81889 1.92482 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.26258 0.37056 2.81889 1.92482 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.18307 2.97790 0.27651 2.55130 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.16453 2.20776 2.65793 0.34934 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.26258 0.37056 2.81889 1.92482 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.16453 2.20776 2.65793 0.34934 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.16453 2.20776 2.65793 0.34934 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.26654 2.75106 2.52397 2.40821 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.18307 2.97790 0.27651 2.55130 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.26654 2.75106 2.52397 2.40821 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.26654 2.75106 2.52397 2.40821 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.26654 2.75106 2.52397 2.40821 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.26258 0.37056 2.81889 1.92482 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.26654 2.75106 2.52397 2.40821 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.26654 2.75106 2.52397 2.40821 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.16453 2.20776 2.65793 0.34934 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.18307 2.97790 0.27651 2.55130 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.26654 2.75106 2.52397 2.40821 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.16453 2.20776 2.65793 0.34934 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.16453 2.20776 2.65793 0.34934 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.26654 2.75106 2.52397 2.40821 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.16453 2.20776 2.65793 0.34934 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.92594 2.23767 1.09035 1.82613 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.98491 1.25797 2.06739 1.53349 59 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 0.26654 2.75106 2.52397 2.40821 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.16453 2.20776 2.65793 0.34934 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.16453 2.20776 2.65793 0.34934 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.18307 2.97790 0.27651 2.55130 63 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.18307 2.97790 0.27651 2.55130 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 0.26654 2.75106 2.52397 2.40821 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.26258 0.37056 2.81889 1.92482 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 2.18307 2.97790 0.27651 2.55130 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 2.26258 0.37056 2.81889 1.92482 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 69 2.16453 2.20776 2.65793 0.34934 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 70 2.18307 2.97790 0.27651 2.55130 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 71 0.26654 2.75106 2.52397 2.40821 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 72 2.03625 2.59375 0.34112 2.47968 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 73 2.03671 2.59424 0.34090 2.48037 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 74 2.33336 0.80341 2.01124 1.13505 74 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 75 2.90142 0.31450 2.55231 1.98778 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 76 0.26654 2.75106 2.52397 2.40821 76 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //