INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN111 ACC RF01615 DESC Nematode snoRNA ceN111 STATES 214 NODES 69 CLEN 70 W 88 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 09:39:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01615/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.831055 CKSUM 1124417215 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.00 NC 42.60 EFP7GF -7.7854 0.71880 ECMLC 0.59929 -6.07917 3.52258 1600000 378640 0.003169 ECMGC 0.39791 -17.18649 -3.08259 1600000 109481 0.003654 ECMLI 0.59021 -3.84787 5.37882 1600000 278112 0.004315 ECMGI 0.43835 -10.78547 1.04797 1600000 71589 0.005587 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 88 108 -6.827 -8.072 -0.348 -2.308 IL 1 1 2 1 4 1 26 89 110 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 27 89 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 71 - U - - MR 3 2 3 5 5 1 27 88 108 -6.844 -0.047 -6.659 -6.871 -7.763 -0.973 -1.064 -1.673 1.432 D 4 2 3 5 5 0 22 86 107 -6.102 -0.378 -3.728 -5.159 -3.154 IR 5 5 3 5 5 1 25 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 70 A U - - MP 6 5 3 10 6 2 27 87 107 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.731 -2.778 -3.754 3.292 -4.063 -5.120 0.233 -3.800 -3.649 1.143 -4.193 -0.264 -0.185 -4.317 -1.708 -2.592 ML 7 5 3 10 6 1 22 85 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 21 85 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 18 83 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 24 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 24 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 69 A U - - MP 12 11 6 16 6 2 25 85 105 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.731 -2.778 -3.754 3.292 -4.063 -5.120 0.233 -3.800 -3.649 1.143 -4.193 -0.264 -0.185 -4.317 -1.708 -2.592 ML 13 11 6 16 6 1 22 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 20 83 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 17 82 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 23 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 23 84 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 68 G C - - MP 18 17 6 22 4 2 23 83 103 -6.907 -7.114 -0.055 -5.528 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 19 17 6 22 4 1 20 83 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 18 82 103 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 17 81 102 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 22 84 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 22 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 4 - C - - - ML 24 23 6 26 3 1 22 80 101 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 25 23 6 26 3 0 16 79 99 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 21 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - u - - - ML 27 26 3 29 3 1 21 79 100 -7.926 -0.021 -6.580 0.241 -0.013 -1.012 0.412 D 28 26 3 29 3 0 15 78 98 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 20 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 30 29 3 32 3 1 20 78 99 -7.926 -0.021 -6.580 1.004 -1.368 0.046 -0.800 D 31 29 3 32 3 0 14 77 97 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 19 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 33 32 3 35 3 1 19 77 98 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 34 32 3 35 3 0 14 76 96 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 18 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 36 35 3 38 3 1 19 76 96 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 37 35 3 38 3 0 13 75 95 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 39 38 3 41 3 1 18 75 95 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 40 38 3 41 3 0 12 74 94 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - u - - - ML 42 41 3 44 3 1 17 74 94 -7.926 -0.021 -6.580 0.226 -0.817 -1.113 0.848 D 43 41 3 44 3 0 11 73 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 16 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 45 44 3 47 3 1 16 73 93 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 46 44 3 47 3 0 11 72 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 15 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 48 47 3 50 3 1 15 72 92 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 49 47 3 50 3 0 10 71 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 51 50 3 53 3 1 15 71 91 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 52 50 3 53 3 0 9 69 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - U - - - ML 54 53 3 56 3 1 14 70 90 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 55 53 3 56 3 0 8 68 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 13 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - U - - - ML 57 56 3 59 3 1 13 69 89 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 58 56 3 59 3 0 8 67 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 12 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 60 59 3 62 3 1 13 68 88 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 61 59 3 62 3 0 7 66 87 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - A - - - ML 63 62 3 65 3 1 12 67 87 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 64 62 3 65 3 0 6 65 86 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 11 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - U - - - ML 66 65 3 68 3 1 11 66 86 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 67 65 3 68 3 0 5 64 84 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 10 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - A - - - ML 69 68 3 71 3 1 10 65 85 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 70 68 3 71 3 0 5 63 83 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 9 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - G - - - ML 72 71 3 74 3 1 10 64 84 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 73 71 3 74 3 0 4 62 82 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - U - - - ML 75 74 3 77 3 1 9 63 83 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 76 74 3 77 3 0 3 61 81 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 78 77 3 80 3 1 8 62 82 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 79 77 3 80 3 0 2 60 80 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 7 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - C - - - ML 81 80 3 83 3 1 8 61 80 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 82 80 3 83 3 0 2 59 79 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 6 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - A - - - ML 84 83 3 86 3 1 7 60 79 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 85 83 3 86 3 0 1 58 78 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 6 61 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - G - - - ML 87 86 3 89 3 1 6 58 78 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 88 86 3 89 3 0 0 57 77 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 5 60 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - C - - - ML 90 89 3 92 3 1 6 57 77 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 91 89 3 92 3 0 0 56 76 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - U - - - ML 93 92 3 95 3 1 5 56 76 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 94 92 3 95 3 0 0 55 75 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - u - - - ML 96 95 3 98 3 1 5 55 75 -7.926 -0.021 -6.580 0.171 -0.821 -1.133 0.890 D 97 95 3 98 3 0 0 54 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - A - - - ML 99 98 3 101 3 1 4 54 74 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 100 98 3 101 3 0 0 53 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - u - - - ML 102 101 3 104 3 1 4 53 73 -7.926 -0.021 -6.580 -0.703 0.103 -1.460 0.962 D 103 101 3 104 3 0 0 52 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - C - - - ML 105 104 3 107 3 1 3 52 72 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 106 104 3 107 3 0 0 51 71 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - u - - - ML 108 107 3 110 3 1 3 51 71 -7.926 -0.021 -6.580 -0.703 0.103 -1.460 0.962 D 109 107 3 110 3 0 0 50 70 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - u - - - ML 111 110 3 113 3 1 2 50 70 -7.926 -0.021 -6.580 0.232 0.032 -1.016 0.388 D 112 110 3 113 3 0 0 49 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - c - - - ML 114 113 3 116 3 1 2 49 69 -7.926 -0.021 -6.580 0.287 0.599 -1.186 -0.276 D 115 113 3 116 3 0 0 47 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - G - - - ML 117 116 3 119 3 1 2 48 68 -2.505 -0.298 -6.580 -1.500 -2.707 1.704 -2.093 D 118 116 3 119 3 0 0 46 65 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 48 68 -1.916 -0.526 -4.616 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - G - - - ML 120 119 3 122 3 1 1 46 66 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 121 119 3 122 3 0 0 45 65 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - a - - - ML 123 122 3 125 3 1 1 45 65 -7.926 -0.021 -6.580 0.974 -1.362 0.096 -0.790 D 124 122 3 125 3 0 0 44 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - u - - - ML 126 125 3 128 3 1 1 44 64 -7.926 -0.021 -6.580 0.226 -0.817 -1.113 0.848 D 127 125 3 128 3 0 0 43 62 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - U - - - ML 129 128 3 131 3 1 1 43 63 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 130 128 3 131 3 0 0 42 61 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - U - - - ML 132 131 3 134 3 1 1 42 62 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 133 131 3 134 3 0 0 41 60 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - G - - - ML 135 134 3 137 3 1 1 41 60 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 136 134 3 137 3 0 0 40 59 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 138 137 3 140 3 1 1 40 59 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 139 137 3 140 3 0 0 39 58 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 141 140 3 143 3 1 1 39 58 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 142 140 3 143 3 0 0 38 57 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - G - - - ML 144 143 3 146 3 1 1 38 57 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 145 143 3 146 3 0 0 36 56 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - A - - - ML 147 146 3 149 3 1 1 37 56 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 148 146 3 149 3 0 0 35 55 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - u - - - ML 150 149 3 152 3 1 1 36 55 -7.926 -0.021 -6.580 -0.400 -0.859 -0.157 0.843 D 151 149 3 152 3 0 0 34 54 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - A - - - ML 153 152 3 155 3 1 1 35 54 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 154 152 3 155 3 0 0 33 53 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - A - - - ML 156 155 3 158 3 1 1 33 53 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 157 155 3 158 3 0 0 32 52 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 159 158 3 161 3 1 1 32 52 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 160 158 3 161 3 0 0 31 50 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 162 161 3 164 3 1 1 31 50 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 163 161 3 164 3 0 0 30 49 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - U - - - ML 165 164 3 167 3 1 1 30 49 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 166 164 3 167 3 0 0 29 48 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 168 167 3 170 3 1 1 29 48 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 169 167 3 170 3 0 0 28 47 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - C - - - ML 171 170 3 173 3 1 1 28 47 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 172 170 3 173 3 0 0 27 46 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - G - - - ML 174 173 3 176 3 1 1 27 46 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 175 173 3 176 3 0 0 26 45 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - C - - - ML 177 176 3 179 3 1 1 26 45 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 178 176 3 179 3 0 0 25 44 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - C - - - ML 180 179 3 182 3 1 1 25 44 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 181 179 3 182 3 0 0 24 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - C - - - ML 183 182 3 185 3 1 1 24 42 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 184 182 3 185 3 0 0 22 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - C - - - ML 186 185 3 188 3 1 1 22 41 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - U - - - ML 189 188 3 191 3 1 1 21 40 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - A - - - ML 192 191 3 194 3 1 1 20 39 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 195 194 3 197 3 1 1 19 37 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - C - - - ML 198 197 3 200 3 1 1 18 36 -7.926 -0.021 -6.580 -1.650 1.599 -2.470 -1.082 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - a - - - ML 201 200 3 203 3 1 1 16 35 -7.926 -0.021 -6.580 0.848 -0.922 -1.044 0.247 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - G - - - ML 204 203 3 206 3 1 1 15 33 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 207 206 3 209 3 1 1 13 32 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - G - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 -1.500 -2.707 1.704 -2.093 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN111 ACC RF01615 DESC Nematode snoRNA ceN111 LENG 70 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 09:39:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01615/CM NSEQ 3 EFFN 1.930664 CKSUM 1124417215 STATS LOCAL MSV -7.9882 0.71880 STATS LOCAL VITERBI -9.0273 0.71880 STATS LOCAL FORWARD -3.7403 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29635 1.59018 1.55543 1.16640 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 0.00000 * 1 0.44517 2.50965 1.65596 2.44096 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 2 0.44217 2.51787 1.65685 2.45350 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 3 2.44052 3.01058 0.20924 2.94848 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 4 2.59412 0.26021 3.16519 2.18752 4 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 5 1.21847 1.39044 2.09903 1.10028 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 6 0.68114 2.35806 1.35018 1.96495 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 7 2.41680 2.41416 2.92537 0.26435 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 8 2.48270 3.32860 0.19139 2.90355 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 9 0.19464 3.03088 2.77569 2.71378 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 10 1.23045 1.96640 2.17329 0.78949 10 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 11 2.48270 3.32860 0.19139 2.90355 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 12 0.19464 3.03088 2.77569 2.71378 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 13 2.41680 2.41416 2.92537 0.26435 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 14 2.41680 2.41416 2.92537 0.26435 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 15 2.41680 2.41416 2.92537 0.26435 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 16 2.41680 2.41416 2.92537 0.26435 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 17 0.19464 3.03088 2.77569 2.71378 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 18 2.41680 2.41416 2.92537 0.26435 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 19 0.19464 3.03088 2.77569 2.71378 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 20 2.48270 3.32860 0.19139 2.90355 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 21 2.41680 2.41416 2.92537 0.26435 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 22 2.41680 2.41416 2.92537 0.26435 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 23 2.59412 0.26021 3.16519 2.18752 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 24 0.19464 3.03088 2.77569 2.71378 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 25 2.48270 3.32860 0.19139 2.90355 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 26 2.59412 0.26021 3.16519 2.18752 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 27 2.41680 2.41416 2.92537 0.26435 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 28 1.26970 1.97012 2.18821 0.76030 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 29 0.19464 3.03088 2.77569 2.71378 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 30 1.89548 1.31038 2.42214 0.71069 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 31 2.59412 0.26021 3.16519 2.18752 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 32 1.89548 1.31038 2.42214 0.71069 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 33 1.22511 1.35879 2.10268 1.11726 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 34 1.18747 0.95746 2.22874 1.59219 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 35 2.48270 3.32860 0.19139 2.90355 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.26023 1.56935 3.86602 0.19031 1.75276 1.09861 0.40547 36 2.48270 3.32860 0.19139 2.90355 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 37 0.70271 2.35348 1.31448 1.95822 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 38 1.23045 1.96640 2.17329 0.78949 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 39 2.41680 2.41416 2.92537 0.26435 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 40 2.41680 2.41416 2.92537 0.26435 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 41 2.48270 3.32860 0.19139 2.90355 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 42 0.19464 3.03088 2.77569 2.71378 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 43 2.41680 2.41416 2.92537 0.26435 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 44 2.48270 3.32860 0.19139 2.90355 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 45 0.19464 3.03088 2.77569 2.71378 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 46 1.67840 1.99659 1.49336 0.79205 47 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 47 0.19464 3.03088 2.77569 2.71378 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 48 0.19464 3.03088 2.77569 2.71378 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 49 0.19464 3.03088 2.77569 2.71378 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 50 2.41680 2.41416 2.92537 0.26435 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 51 2.41680 2.41416 2.92537 0.26435 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 52 2.41680 2.41416 2.92537 0.26435 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 53 2.59412 0.26021 3.16519 2.18752 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 54 2.48270 3.32860 0.19139 2.90355 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 55 2.59412 0.26021 3.16519 2.18752 56 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 56 2.59412 0.26021 3.16519 2.18752 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 57 2.59412 0.26021 3.16519 2.18752 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 58 2.59412 0.26021 3.16519 2.18752 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 59 2.41680 2.41416 2.92537 0.26435 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 60 0.19464 3.03088 2.77569 2.71378 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 61 2.41680 2.41416 2.92537 0.26435 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 62 2.59412 0.26021 3.16519 2.18752 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 63 0.79084 2.03850 2.12437 1.21469 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 64 2.48270 3.32860 0.19139 2.90355 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 65 0.19464 3.03088 2.77569 2.71378 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 66 2.48270 3.32860 0.19139 2.90355 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 67 3.16352 0.24385 2.84869 2.15244 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 68 2.68915 1.92758 2.33896 0.37087 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.04279 3.86602 3.86602 1.46634 0.26236 1.09861 0.40547 69 2.68747 1.92743 2.33839 0.37115 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.24370 3.86602 1.63304 1.46634 0.26236 1.09861 0.40547 70 2.09691 2.15318 2.58535 0.37734 71 U - - : 1.38629 1.38629 1.38629 1.38629 0.02637 3.64869 * 1.46634 0.26236 0.00000 * //