INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN109 ACC RF01613 DESC Nematode snoRNA ceN109 STATES 205 NODES 66 CLEN 67 W 96 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 17:30:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01613/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.030273 CKSUM 1184932291 NULL 0.000 0.000 0.000 0.000 GA 52.00 TC 52.10 NC 51.50 EFP7GF -8.5780 0.71884 ECMLC 0.69873 -5.39897 2.91554 1600000 400196 0.002999 ECMGC 0.37678 -18.69309 -3.82935 1600000 108217 0.003696 ECMLI 0.69394 -3.55599 4.31098 1600000 281890 0.004257 ECMGI 0.41038 -13.10004 -0.24958 1600000 78047 0.005125 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 96 133 -6.902 -8.147 -0.079 -4.601 IL 1 1 2 1 4 1 23 97 134 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 97 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 71 - U - - MR 3 2 3 5 3 1 25 96 133 -8.390 -0.018 -6.708 -1.556 -1.540 -2.293 1.638 D 4 2 3 5 3 0 19 94 131 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 24 96 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 70 - a - - MR 6 5 3 8 5 1 24 95 132 -7.127 -0.038 -6.942 -7.154 -8.046 0.356 -0.859 -0.021 0.243 D 7 5 3 8 5 0 18 93 130 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 22 95 132 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 69 G C - - MP 9 8 3 13 6 2 24 94 131 -9.123 -9.062 -0.021 -7.839 -8.119 -8.514 -4.820 -3.131 -4.927 0.148 -5.343 -4.724 -0.688 -5.175 -4.379 3.656 -4.710 -0.833 -1.071 -4.519 -2.729 -3.802 ML 10 8 3 13 6 1 19 92 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 18 92 129 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 15 89 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 21 93 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 21 93 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 68 C G - - MP 15 14 6 19 6 2 22 92 129 -9.123 -9.062 -0.021 -7.839 -8.119 -8.514 -4.636 -4.550 -4.312 -0.774 -3.011 -4.712 3.577 -3.829 -4.364 -0.546 -4.615 -2.498 0.495 -4.700 -0.719 -3.201 ML 16 14 6 19 6 1 19 91 127 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 17 90 127 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 14 88 125 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 20 91 128 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 20 91 128 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 67 G C - - MP 21 20 6 25 4 2 20 90 127 -6.989 -7.196 -0.052 -5.610 -4.820 -3.131 -4.927 0.148 -5.343 -4.724 -0.688 -5.175 -4.379 3.656 -4.710 -0.833 -1.071 -4.519 -2.729 -3.802 ML 22 20 6 25 4 1 17 89 126 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 15 89 125 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 14 87 124 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 19 90 127 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 19 90 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - C - - - ML 27 26 6 29 3 1 19 88 125 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 28 26 6 29 3 0 13 86 123 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 18 89 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - g - - - ML 30 29 3 32 3 1 18 87 124 -8.002 -0.020 -6.656 0.374 -1.534 0.879 -0.942 D 31 29 3 32 3 0 12 85 122 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 17 88 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - A - - - ML 33 32 3 35 3 1 17 86 123 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 34 32 3 35 3 0 11 84 121 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 16 87 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - U - - - ML 36 35 3 38 3 1 16 85 122 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 37 35 3 38 3 0 11 83 120 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 86 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - G - - - ML 39 38 3 41 3 1 16 84 121 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 40 38 3 41 3 0 10 82 119 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 15 85 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - A - - - ML 42 41 3 44 3 1 15 83 120 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 43 41 3 44 3 0 9 81 118 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 14 84 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - A - - - ML 45 44 3 47 3 1 14 82 119 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 46 44 3 47 3 0 8 80 117 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 13 83 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - g - - - ML 48 47 3 50 3 1 13 81 118 -8.002 -0.020 -6.656 -0.455 -1.128 0.761 0.161 D 49 47 3 50 3 0 8 79 116 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 12 82 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - G - - - ML 51 50 3 53 3 1 13 80 117 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 52 50 3 53 3 0 7 78 115 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 12 81 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - U - - - ML 54 53 3 56 3 1 12 79 116 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 55 53 3 56 3 0 6 77 114 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 11 80 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - U - - - ML 57 56 3 59 3 1 11 78 115 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 58 56 3 59 3 0 5 76 113 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 10 79 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - U - - - ML 60 59 3 62 3 1 11 77 114 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 61 59 3 62 3 0 5 75 112 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 9 78 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 63 62 3 65 3 1 10 76 113 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 64 62 3 65 3 0 4 74 111 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 9 77 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - A - - - ML 66 65 3 68 3 1 9 75 112 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 67 65 3 68 3 0 3 73 110 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 8 76 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - C - - - ML 69 68 3 71 3 1 9 74 111 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 70 68 3 71 3 0 2 72 109 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 7 75 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - C - - - ML 72 71 3 74 3 1 8 73 110 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 73 71 3 74 3 0 2 71 108 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 7 74 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - A - - - ML 75 74 3 77 3 1 7 72 109 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 76 74 3 77 3 0 1 70 107 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 73 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - U - - - ML 78 77 3 80 3 1 7 71 108 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 79 77 3 80 3 0 0 69 106 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 5 72 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - C - - - ML 81 80 3 83 3 1 6 70 107 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 82 80 3 83 3 0 0 68 105 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 4 71 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - U - - - ML 84 83 3 86 3 1 5 69 106 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 85 83 3 86 3 0 0 67 104 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 70 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - U - - - ML 87 86 3 89 3 1 5 68 105 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 88 86 3 89 3 0 0 66 103 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 3 69 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - U - - - ML 90 89 3 92 3 1 4 67 104 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 91 89 3 92 3 0 0 65 102 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 3 68 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - C - - - ML 93 92 3 95 3 1 4 66 103 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 94 92 3 95 3 0 0 64 101 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 2 67 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 27 - G - - - ML 96 95 3 98 3 1 3 65 102 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 97 95 3 98 3 0 0 63 100 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 2 66 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 28 - G - - - ML 99 98 3 101 3 1 3 64 101 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 100 98 3 101 3 0 0 62 99 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 65 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 29 - C - - - ML 102 101 3 104 3 1 2 63 100 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 103 101 3 104 3 0 0 61 98 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 64 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 30 - U - - - ML 105 104 3 107 3 1 2 62 99 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 106 104 3 107 3 0 0 60 97 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 63 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 31 - G - - - ML 108 107 3 110 3 1 2 61 98 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 109 107 3 110 3 0 0 59 96 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 62 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 32 - A - - - ML 111 110 3 113 3 1 1 60 97 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 112 110 3 113 3 0 0 58 95 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 61 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 33 - a - - - ML 114 113 3 116 3 1 1 59 96 -8.002 -0.020 -6.656 0.399 -0.187 -0.047 -0.259 D 115 113 3 116 3 0 0 57 94 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 60 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 34 - u - - - ML 117 116 3 119 3 1 1 58 95 -8.002 -0.020 -6.656 -0.442 -0.902 -0.147 0.868 D 118 116 3 119 3 0 0 56 93 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 59 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 35 - u - - - ML 120 119 3 122 3 1 1 57 94 -8.002 -0.020 -6.656 0.248 0.050 -1.048 0.372 D 121 119 3 122 3 0 0 55 91 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 58 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 36 - c - - - ML 123 122 3 125 3 1 1 56 93 -8.002 -0.020 -6.656 0.244 0.678 -1.263 -0.322 D 124 122 3 125 3 0 0 53 90 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 57 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 37 - A - - - ML 126 125 3 128 3 1 1 55 92 -2.503 -0.297 -6.656 1.735 -2.448 -2.073 -1.998 D 127 125 3 128 3 0 0 49 86 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 58 94 -0.724 -1.423 -5.545 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - U - - - ML 129 128 3 131 3 1 1 40 59 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 130 128 3 131 3 0 0 39 58 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 132 131 3 134 3 1 1 39 58 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 133 131 3 134 3 0 0 37 57 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - A - - - ML 135 134 3 137 3 1 1 38 57 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 136 134 3 137 3 0 0 36 56 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - U - - - ML 138 137 3 140 3 1 1 37 56 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 139 137 3 140 3 0 0 35 55 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - G - - - ML 141 140 3 143 3 1 1 36 55 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 142 140 3 143 3 0 0 34 54 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - C - - - ML 144 143 3 146 3 1 1 34 54 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 145 143 3 146 3 0 0 33 53 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - c - - - ML 147 146 3 149 3 1 1 33 53 -8.002 -0.020 -6.656 -0.812 0.840 -1.616 0.394 D 148 146 3 149 3 0 0 32 51 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - A - - - ML 150 149 3 152 3 1 1 32 51 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 151 149 3 152 3 0 0 31 50 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - g - - - ML 153 152 3 155 3 1 1 31 50 -8.002 -0.020 -6.656 0.374 -1.534 0.879 -0.942 D 154 152 3 155 3 0 0 30 49 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - u - - - ML 156 155 3 158 3 1 1 30 49 -8.002 -0.020 -6.656 0.224 0.017 -1.050 0.418 D 157 155 3 158 3 0 0 29 48 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - a - - - ML 159 158 3 161 3 1 1 29 48 -8.002 -0.020 -6.656 0.865 -0.958 -1.085 0.254 D 160 158 3 161 3 0 0 28 47 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 53 - U - - - ML 162 161 3 164 3 1 1 28 47 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 163 161 3 164 3 0 0 27 46 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 54 - U - - - ML 165 164 3 167 3 1 1 27 46 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 166 164 3 167 3 0 0 26 45 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - u - - - ML 168 167 3 170 3 1 1 26 45 -8.002 -0.020 -6.656 -0.765 0.122 -1.528 0.983 D 169 167 3 170 3 0 0 25 44 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - u - - - ML 171 170 3 173 3 1 1 25 43 -8.002 -0.020 -6.656 0.230 -0.857 -1.156 0.869 D 172 170 3 173 3 0 0 24 43 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - c - - - ML 174 173 3 176 3 1 1 23 42 -8.002 -0.020 -6.656 0.293 0.632 -1.242 -0.318 D 175 173 3 176 3 0 0 22 41 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - u - - - ML 177 176 3 179 3 1 1 22 41 -8.002 -0.020 -6.656 0.230 -0.857 -1.156 0.869 D 178 176 3 179 3 0 0 21 40 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - A - - - ML 180 179 3 182 3 1 1 21 40 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 181 179 3 182 3 0 0 20 39 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - U - - - ML 183 182 3 185 3 1 1 20 39 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - A - - - ML 186 185 3 188 3 1 1 19 37 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - C - - - ML 189 188 3 191 3 1 1 17 36 -8.002 -0.020 -6.656 -1.834 1.648 -2.660 -1.229 D 190 188 3 191 3 0 0 17 36 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - U - - - ML 192 191 3 194 3 1 1 16 35 -8.002 -0.020 -6.656 -1.556 -1.540 -2.293 1.638 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - G - - - ML 195 194 3 197 3 1 1 15 33 -8.002 -0.020 -6.656 -1.662 -2.894 1.741 -2.281 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - A - - - ML 198 197 3 200 3 1 1 13 31 -8.002 -0.020 -6.656 1.735 -2.448 -2.073 -1.998 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - G - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -1.662 -2.894 1.741 -2.281 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN109 ACC RF01613 DESC Nematode snoRNA ceN109 LENG 67 MAXL 154 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 17:30:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01613/CM NSEQ 3 EFFN 2.129883 CKSUM 1184932291 STATS LOCAL MSV -8.1610 0.71884 STATS LOCAL VITERBI -8.9698 0.71884 STATS LOCAL FORWARD -3.6039 0.71884 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.32203 1.53186 1.48148 1.23797 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 0.00000 * 1 2.51206 3.12508 0.18846 3.06338 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 2 3.08466 0.26831 2.84919 2.02727 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 3 2.51694 3.13059 0.18726 3.07111 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 4 2.71937 0.22887 3.29365 2.28740 4 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 5 1.12680 2.47450 0.76585 2.06523 5 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 6 0.17366 3.13459 2.86901 2.82777 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 7 2.51235 2.49306 3.02555 0.23859 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 8 2.59174 3.45418 0.16823 3.02959 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 9 0.17366 3.13459 2.86901 2.82777 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 10 0.17366 3.13459 2.86901 2.82777 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 11 1.71794 2.18592 0.84575 1.27671 11 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 12 2.59174 3.45418 0.16823 3.02959 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 13 2.51235 2.49306 3.02555 0.23859 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 14 2.51235 2.49306 3.02555 0.23859 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 15 2.51235 2.49306 3.02555 0.23859 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 16 0.17366 3.13459 2.86901 2.82777 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 17 0.17366 3.13459 2.86901 2.82777 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 18 2.71937 0.22887 3.29365 2.28740 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 19 2.71937 0.22887 3.29365 2.28740 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 20 0.17366 3.13459 2.86901 2.82777 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 21 2.51235 2.49306 3.02555 0.23859 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 22 2.71937 0.22887 3.29365 2.28740 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 23 2.51235 2.49306 3.02555 0.23859 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 24 2.51235 2.49306 3.02555 0.23859 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 25 2.51235 2.49306 3.02555 0.23859 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 26 2.71937 0.22887 3.29365 2.28740 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 27 2.59174 3.45418 0.16823 3.02959 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 28 2.59174 3.45418 0.16823 3.02959 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 29 2.71937 0.22887 3.29365 2.28740 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 30 2.51235 2.49306 3.02555 0.23859 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 31 2.59174 3.45418 0.16823 3.02959 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 32 0.17366 3.13459 2.86901 2.82777 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 33 1.10894 1.51300 1.41445 1.57608 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 34 1.70701 2.02617 1.48634 0.77533 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 35 1.21405 1.34650 2.12366 1.12928 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 36 1.21835 0.90342 2.28233 1.62428 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 37 0.17366 3.13459 2.86901 2.82777 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.25661 1.57730 3.92209 1.39127 0.28603 1.09861 0.40547 38 2.51235 2.49306 3.02555 0.23859 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 39 2.59174 3.45418 0.16823 3.02959 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 40 0.17366 3.13459 2.86901 2.82777 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 41 2.51235 2.49306 3.02555 0.23859 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 42 2.59174 3.45418 0.16823 3.02959 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 43 2.71937 0.22887 3.29365 2.28740 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 44 1.97253 0.79085 2.53287 1.11473 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 45 0.17366 3.13459 2.86901 2.82777 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 46 1.12680 2.47450 0.76585 2.06523 50 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 47 1.23045 1.36942 2.12488 1.09620 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 48 0.77979 2.06306 2.15233 1.20992 52 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 49 2.51235 2.49306 3.02555 0.23859 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 50 2.51235 2.49306 3.02555 0.23859 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 51 1.93801 1.29716 2.46881 0.69712 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 52 1.22752 1.99398 2.20246 0.77588 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 53 1.18346 0.93526 2.26688 1.62117 57 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 54 1.22752 1.99398 2.20246 0.77588 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 55 0.17366 3.13459 2.86901 2.82777 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 56 2.51235 2.49306 3.02555 0.23859 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 57 0.17366 3.13459 2.86901 2.82777 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 58 2.71937 0.22887 3.29365 2.28740 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 59 2.51235 2.49306 3.02555 0.23859 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 60 2.59174 3.45418 0.16823 3.02959 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 61 0.17366 3.13459 2.86901 2.82777 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 62 2.59174 3.45418 0.16823 3.02959 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 63 3.28397 0.22016 2.96642 2.21970 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 64 2.30638 3.02142 0.23085 2.85103 68 G - - > 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 65 3.29114 0.21944 2.96948 2.22106 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 66 1.13871 1.99128 1.39706 1.21764 70 a - - : 1.38629 1.38629 1.38629 1.38629 0.04040 3.92209 3.92209 1.46634 0.26236 1.09861 0.40547 67 2.51235 2.49306 3.02555 0.23859 71 U - - : 1.38629 1.38629 1.38629 1.38629 0.02041 3.90209 * 1.46634 0.26236 0.00000 * //