INFERNAL1/a [1.1.5 | Sep 2023] NAME plasmodium_snoR30 ACC RF01605 DESC small nucleolar RNA snoR30 STATES 226 NODES 73 CLEN 74 W 98 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 21:22:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01605/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.708008 CKSUM 3329053923 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.30 NC 41.70 EFP7GF -7.7184 0.71871 ECMLC 0.58667 -5.56506 4.35025 1600000 403161 0.002976 ECMGC 0.36793 -15.39055 0.36271 1600000 131601 0.003039 ECMLI 0.53775 -3.88596 6.37752 1600000 299308 0.004009 ECMGI 0.40570 -8.58079 4.60069 1600000 84055 0.004759 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 98 127 -6.854 -7.061 -0.057 -5.475 IL 1 1 2 1 4 1 30 101 130 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 30 100 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 5 1 30 98 127 -7.018 -0.041 -6.833 -7.046 -7.937 -1.327 -1.352 -2.052 1.570 D 4 2 3 5 5 0 24 97 126 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 28 99 127 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 79 U A - - MP 6 5 3 10 6 2 30 97 126 -9.072 -9.012 -0.022 -7.788 -8.068 -8.463 -4.012 -3.831 -3.870 -0.140 -2.851 -4.450 1.473 -3.534 -3.876 0.142 -4.258 -1.736 3.236 -4.170 -0.531 -2.718 ML 7 5 3 10 6 1 26 96 125 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 24 96 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 21 93 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 27 97 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 27 97 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 78 U A - - MP 12 11 6 16 6 2 28 95 124 -9.072 -9.012 -0.022 -7.788 -8.068 -8.463 -4.012 -3.831 -3.870 -0.140 -2.851 -4.450 1.473 -3.534 -3.876 0.142 -4.258 -1.736 3.236 -4.170 -0.531 -2.718 ML 13 11 6 16 6 1 25 94 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 23 94 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 20 92 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 26 95 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 26 95 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 77 U A - - MP 18 17 6 22 4 2 26 93 122 -6.854 -7.061 -0.057 -5.475 -4.012 -3.831 -3.870 -0.140 -2.851 -4.450 1.473 -3.534 -3.876 0.142 -4.258 -1.736 3.236 -4.170 -0.531 -2.718 ML 19 17 6 22 4 1 24 93 122 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 21 92 121 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 20 91 120 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 25 94 123 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 25 93 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 24 23 6 26 3 1 25 91 120 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 25 23 6 26 3 0 19 89 118 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 24 92 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 27 26 3 29 3 1 24 90 119 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 28 26 3 29 3 0 18 88 117 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 23 91 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 30 29 3 32 3 1 23 89 118 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 31 29 3 32 3 0 18 87 116 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 90 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 33 32 3 35 3 1 22 88 117 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 34 32 3 35 3 0 17 86 115 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 21 89 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 36 35 3 38 3 1 21 87 116 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 37 35 3 38 3 0 16 85 114 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 88 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 39 38 3 41 3 1 21 86 115 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 40 38 3 41 3 0 15 84 113 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 87 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 42 41 3 44 3 1 20 85 114 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 43 41 3 44 3 0 14 83 112 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 86 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 45 44 3 47 3 1 19 84 113 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 46 44 3 47 3 0 14 82 111 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 18 85 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 48 47 3 50 3 1 18 83 112 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 49 47 3 50 3 0 13 81 110 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 84 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 51 50 3 53 3 1 18 82 111 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 52 50 3 53 3 0 12 80 109 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 83 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - u - - - ML 54 53 3 56 3 1 17 81 110 -7.878 -0.022 -6.532 -0.655 0.140 -1.410 0.916 D 55 53 3 56 3 0 11 79 108 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 82 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - g - - - ML 57 56 3 59 3 1 16 80 109 -7.878 -0.022 -6.532 0.414 -1.400 0.778 -0.803 D 58 56 3 59 3 0 11 78 107 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 81 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 60 59 3 62 3 1 15 79 108 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 61 59 3 62 3 0 10 77 106 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 80 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 63 62 3 65 3 1 15 78 107 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 64 62 3 65 3 0 9 76 105 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 79 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - g - - - ML 66 65 3 68 3 1 14 77 106 -2.475 -0.305 -6.532 -0.306 -0.170 0.615 -0.376 D 67 65 3 68 3 0 8 74 103 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 78 107 -1.233 -0.882 -4.964 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - A - - - ML 69 68 3 71 3 1 13 75 104 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 70 68 3 71 3 0 7 73 102 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 12 76 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - a - - - ML 72 71 3 74 3 1 12 74 103 -7.878 -0.022 -6.532 0.843 -0.090 -1.042 -0.356 D 73 71 3 74 3 0 7 72 101 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 75 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - C - - - ML 75 74 3 77 3 1 12 73 102 -7.878 -0.022 -6.532 -1.532 1.563 -2.349 -0.989 D 76 74 3 77 3 0 6 71 100 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 74 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - U - - - ML 78 77 3 80 3 1 11 72 101 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 79 77 3 80 3 0 5 70 99 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 73 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - U - - - ML 81 80 3 83 3 1 10 71 100 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 82 80 3 83 3 0 5 69 98 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 72 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - G - - - ML 84 83 3 86 3 1 10 70 99 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 85 83 3 86 3 0 4 68 97 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 9 71 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - G - - - ML 87 86 3 89 3 1 9 69 98 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 88 86 3 89 3 0 3 67 96 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 70 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - U - - - ML 90 89 3 92 3 1 8 68 97 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 91 89 3 92 3 0 2 66 95 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 69 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - c - - - ML 93 92 3 95 3 1 8 67 96 -7.878 -0.022 -6.532 -0.677 0.699 -1.461 0.473 D 94 92 3 95 3 0 2 65 94 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 68 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - u - - - ML 96 95 3 98 3 1 7 66 95 -7.878 -0.022 -6.532 -0.655 0.140 -1.410 0.916 D 97 95 3 98 3 0 1 64 93 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 6 67 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - G - - - ML 99 98 3 101 3 1 6 65 94 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 100 98 3 101 3 0 0 63 92 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 66 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - U - - - ML 102 101 3 104 3 1 6 64 93 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 103 101 3 104 3 0 0 62 91 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 65 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - G - - - ML 105 104 3 107 3 1 5 63 92 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 106 104 3 107 3 0 0 61 90 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 4 64 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - U - - - ML 108 107 3 110 3 1 5 62 91 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 109 107 3 110 3 0 0 60 89 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 63 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - U - - - ML 111 110 3 113 3 1 4 61 90 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 112 110 3 113 3 0 0 59 88 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 3 62 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - A - - - ML 114 113 3 116 3 1 4 60 89 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 115 113 3 116 3 0 0 58 87 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 61 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - C - - - ML 117 116 3 119 3 1 3 59 88 -7.878 -0.022 -6.532 -1.532 1.563 -2.349 -0.989 D 118 116 3 119 3 0 0 57 86 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 2 60 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - U - - - ML 120 119 3 122 3 1 3 58 87 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 121 119 3 122 3 0 0 56 85 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 59 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - G - - - ML 123 122 3 125 3 1 2 57 86 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 124 122 3 125 3 0 0 55 84 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 58 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - A - - - ML 126 125 3 128 3 1 2 56 85 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 127 125 3 128 3 0 0 54 83 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 57 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - A - - - ML 129 128 3 131 3 1 2 55 84 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 130 128 3 131 3 0 0 53 82 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 56 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - a - - - ML 132 131 3 134 3 1 1 54 83 -7.878 -0.022 -6.532 0.843 -0.090 -1.042 -0.356 D 133 131 3 134 3 0 0 52 81 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 55 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - U - - - ML 135 134 3 137 3 1 1 53 82 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 136 134 3 137 3 0 0 51 80 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 54 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - A - - - ML 138 137 3 140 3 1 1 52 81 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 139 137 3 140 3 0 0 50 79 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 53 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - A - - - ML 141 140 3 143 3 1 1 51 80 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 142 140 3 143 3 0 0 49 78 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 52 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - u - - - ML 144 143 3 146 3 1 1 50 79 -7.878 -0.022 -6.532 -0.655 0.140 -1.410 0.916 D 145 143 3 146 3 0 0 48 77 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 51 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 147 146 3 149 3 1 1 49 78 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 148 146 3 149 3 0 0 47 76 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 50 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - U - - - ML 150 149 3 152 3 1 1 48 77 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 151 149 3 152 3 0 0 46 75 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 49 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - a - - - ML 153 152 3 155 3 1 1 47 76 -7.878 -0.022 -6.532 0.795 -0.880 -1.010 0.292 D 154 152 3 155 3 0 0 45 74 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 48 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - G - - - ML 156 155 3 158 3 1 1 46 75 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 157 155 3 158 3 0 0 44 73 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 47 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - A - - - ML 159 158 3 161 3 1 1 45 74 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 160 158 3 161 3 0 0 43 72 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 46 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 53 - G - - - ML 162 161 3 164 3 1 1 44 73 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 163 161 3 164 3 0 0 42 71 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 45 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 54 - A - - - ML 165 164 3 167 3 1 1 43 72 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 166 164 3 167 3 0 0 41 70 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 44 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - U - - - ML 168 167 3 170 3 1 1 42 71 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 169 167 3 170 3 0 0 40 69 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 43 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - G - - - ML 171 170 3 173 3 1 1 41 70 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 172 170 3 173 3 0 0 39 68 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 42 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - A - - - ML 174 173 3 176 3 1 1 40 69 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 175 173 3 176 3 0 0 38 67 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 41 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - A - - - ML 177 176 3 179 3 1 1 39 68 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 178 176 3 179 3 0 0 37 66 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 40 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - A - - - ML 180 179 3 182 3 1 1 38 67 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 181 179 3 182 3 0 0 36 65 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 39 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - A - - - ML 183 182 3 185 3 1 1 37 66 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 184 182 3 185 3 0 0 35 64 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 38 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - A - - - ML 186 185 3 188 3 1 1 36 65 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 187 185 3 188 3 0 0 34 63 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 37 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - a - - - ML 189 188 3 191 3 1 1 35 64 -7.878 -0.022 -6.532 0.843 -0.090 -1.042 -0.356 D 190 188 3 191 3 0 0 33 62 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 36 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - a - - - ML 192 191 3 194 3 1 1 34 63 -7.878 -0.022 -6.532 0.795 -0.880 -1.010 0.292 D 193 191 3 194 3 0 0 32 60 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 35 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - a - - - ML 195 194 3 197 3 1 1 33 62 -2.475 -0.305 -6.532 0.923 -1.315 0.140 -0.739 D 196 194 3 197 3 0 0 28 57 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 35 64 -0.922 -1.166 -5.247 0.000 0.000 0.000 0.000 [ MATL 63 ] 68 - a - - - ML 198 197 3 200 3 1 1 22 41 -7.878 -0.022 -6.532 0.923 -1.315 0.140 -0.739 D 199 197 3 200 3 0 0 21 40 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 69 - c - - - ML 201 200 3 203 3 1 1 21 40 -7.878 -0.022 -6.532 0.333 0.527 -1.131 -0.247 D 202 200 3 203 3 0 0 20 39 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 70 - g - - - ML 204 203 3 206 3 1 1 20 39 -7.878 -0.022 -6.532 -0.306 -0.170 0.615 -0.376 D 205 203 3 206 3 0 0 19 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 71 - A - - - ML 207 206 3 209 3 1 1 19 38 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 208 206 3 209 3 0 0 18 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 72 - C - - - ML 210 209 3 212 3 1 1 18 36 -7.878 -0.022 -6.532 -1.532 1.563 -2.349 -0.989 D 211 209 3 212 3 0 0 17 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 73 - U - - - ML 213 212 3 215 3 1 1 16 35 -7.878 -0.022 -6.532 -1.327 -1.352 -2.052 1.570 D 214 212 3 215 3 0 0 16 34 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 74 - G - - - ML 216 215 3 218 3 1 1 15 33 -7.878 -0.022 -6.532 -1.395 -2.585 1.677 -1.971 D 217 215 3 218 3 0 0 15 33 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 75 - A - - - ML 219 218 3 221 3 1 1 13 32 -7.878 -0.022 -6.532 1.679 -2.197 -1.847 -1.723 D 220 218 3 221 3 0 0 13 32 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 76 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.679 -2.197 -1.847 -1.723 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME plasmodium_snoR30 ACC RF01605 DESC small nucleolar RNA snoR30 LENG 74 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 21:22:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01605/CM NSEQ 3 EFFN 1.819336 CKSUM 3329053923 STATS LOCAL MSV -8.3371 0.71871 STATS LOCAL VITERBI -9.4194 0.71871 STATS LOCAL FORWARD -3.2423 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.97195 1.97142 1.55819 1.30240 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 0.00000 * 1 2.36198 2.36904 2.86765 0.28056 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 2 2.69087 1.69940 2.40486 0.41687 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 3 2.69058 1.69939 2.40476 0.41692 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 4 2.68993 1.69939 2.40451 0.41702 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 5 0.20804 2.97083 2.72167 2.64793 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 6 0.20804 2.97083 2.72167 2.64793 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 7 2.36198 2.36904 2.86765 0.28056 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 8 2.41896 3.25470 0.20661 2.82929 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 9 0.20804 2.97083 2.72167 2.64793 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 10 2.36198 2.36904 2.86765 0.28056 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 11 2.41896 3.25470 0.20661 2.82929 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 12 0.20804 2.97083 2.72167 2.64793 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 13 2.36198 2.36904 2.86765 0.28056 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 14 0.20804 2.97083 2.72167 2.64793 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 15 1.86529 1.28251 2.39111 0.74175 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 16 1.09787 2.38483 0.83211 1.97196 16 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 17 0.20804 2.97083 2.72167 2.64793 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 18 0.20804 2.97083 2.72167 2.64793 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 19 1.61787 1.50095 0.94100 1.66854 19 g - - _ 1.38629 1.38629 1.38629 1.38629 0.26810 1.54433 3.82979 0.76475 0.62633 1.09861 0.40547 20 0.20804 2.97083 2.72167 2.64793 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 21 0.79135 1.44359 2.12874 1.65182 23 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 22 2.52201 0.28049 3.09062 2.13019 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 23 2.36198 2.36904 2.86765 0.28056 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 24 2.36198 2.36904 2.86765 0.28056 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 25 2.41896 3.25470 0.20661 2.82929 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 26 2.41896 3.25470 0.20661 2.82929 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 27 2.36198 2.36904 2.86765 0.28056 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 28 1.88149 0.88565 2.42871 1.05831 30 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 29 1.86529 1.28251 2.39111 0.74175 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 30 2.41896 3.25470 0.20661 2.82929 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 31 2.36198 2.36904 2.86765 0.28056 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 32 2.41896 3.25470 0.20661 2.82929 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 33 2.36198 2.36904 2.86765 0.28056 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 34 2.36198 2.36904 2.86765 0.28056 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 35 0.20804 2.97083 2.72167 2.64793 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 36 2.52201 0.28049 3.09062 2.13019 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 37 2.36198 2.36904 2.86765 0.28056 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 38 2.41896 3.25470 0.20661 2.82929 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 39 0.20804 2.97083 2.72167 2.64793 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 40 0.20804 2.97083 2.72167 2.64793 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 41 0.79135 1.44359 2.12874 1.65182 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 42 2.36198 2.36904 2.86765 0.28056 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 43 0.20804 2.97083 2.72167 2.64793 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 44 0.20804 2.97083 2.72167 2.64793 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 45 1.86529 1.28251 2.39111 0.74175 47 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 46 0.20804 2.97083 2.72167 2.64793 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 47 2.36198 2.36904 2.86765 0.28056 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 48 0.82668 2.01121 2.10307 1.18224 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 49 2.41896 3.25470 0.20661 2.82929 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 50 0.20804 2.97083 2.72167 2.64793 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 51 2.41896 3.25470 0.20661 2.82929 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 52 0.20804 2.97083 2.72167 2.64793 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 53 2.36198 2.36904 2.86765 0.28056 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 54 2.41896 3.25470 0.20661 2.82929 56 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 55 0.20804 2.97083 2.72167 2.64793 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 56 0.20804 2.97083 2.72167 2.64793 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 57 0.20804 2.97083 2.72167 2.64793 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 58 0.20804 2.97083 2.72167 2.64793 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 59 0.20804 2.97083 2.72167 2.64793 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 60 0.79135 1.44359 2.12874 1.65182 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 61 0.82668 2.01121 2.10307 1.18224 63 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 62 0.73638 2.32390 1.28220 1.92526 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.26810 1.54433 3.82979 1.12650 0.39181 1.09861 0.40547 63 0.73638 2.32390 1.28220 1.92526 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 64 1.15443 1.00516 2.19290 1.57415 69 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 65 1.61787 1.50095 0.94100 1.66854 70 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 66 0.20804 2.97083 2.72167 2.64793 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 67 2.52201 0.28049 3.09062 2.13019 72 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 68 2.36198 2.36904 2.86765 0.28056 73 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 69 2.41896 3.25470 0.20661 2.82929 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 70 0.20804 2.97083 2.72167 2.64793 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 71 0.20804 2.97083 2.72167 2.64793 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 72 0.47463 2.58278 1.53611 2.44066 77 A - - > 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 73 0.47469 2.58257 1.53611 2.44037 78 A - - > 1.38629 1.38629 1.38629 1.38629 0.04440 3.82979 3.82979 1.46634 0.26236 1.09861 0.40547 74 0.47493 2.58181 1.53610 2.43935 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.02245 3.80783 * 1.46634 0.26236 0.00000 * //