INFERNAL1/a [1.1.5 | Sep 2023] NAME snoR25 ACC RF01600 DESC small nucleolar RNA snoR25 STATES 214 NODES 68 CLEN 70 W 87 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:57:39 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01600/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.777344 CKSUM 436320142 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 54.40 NC 46.00 EFP7GF -8.6468 0.71878 ECMLC 0.56581 -5.34439 4.57205 1600000 328057 0.003658 ECMGC 0.37218 -14.60899 0.48754 1600000 110199 0.003630 ECMLI 0.54202 -3.35895 6.52932 1600000 255189 0.004702 ECMGI 0.43347 -7.68928 4.56820 1600000 81207 0.004926 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 87 108 -6.806 -8.051 -0.084 -4.505 IL 1 1 2 1 4 1 24 89 109 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 89 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 71 - A - - MR 3 2 3 5 5 1 27 87 108 -7.042 -0.040 -6.857 -7.070 -7.961 1.692 -2.253 -1.897 -1.784 D 4 2 3 5 5 0 20 86 107 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 24 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 70 U A - - MP 6 5 3 10 6 2 27 86 107 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.069 -3.891 -3.921 -0.194 -2.889 -4.496 1.436 -3.576 -3.927 0.078 -4.306 -1.793 3.267 -4.225 -0.568 -2.763 ML 7 5 3 10 6 1 22 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 21 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 16 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 23 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 23 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 69 U A - - MP 12 11 6 16 6 2 25 84 105 -9.084 -9.023 -0.091 -4.304 -8.079 -8.474 -4.069 -3.891 -3.921 -0.194 -2.889 -4.496 1.436 -3.576 -3.927 0.078 -4.306 -1.793 3.267 -4.225 -0.568 -2.763 ML 13 11 6 16 6 1 21 83 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 20 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 16 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 22 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 22 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 68 u a - - MP 18 17 6 22 6 2 23 82 103 -9.015 -8.955 -0.023 -7.731 -8.011 -8.406 -2.352 -2.338 -2.472 0.923 -2.185 -3.257 1.679 -2.633 -2.527 1.268 -3.045 -0.615 2.093 -0.041 -0.121 -1.592 ML 19 17 6 22 6 1 20 81 102 -6.931 -7.277 -1.991 -0.542 -7.127 -4.656 -0.270 -0.546 -0.900 0.964 MR 20 17 6 22 6 1 18 81 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 16 79 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 21 82 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 21 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 67 U A - - MP 24 23 6 28 4 2 22 80 101 -6.693 -6.900 -0.064 -5.314 -3.736 -3.540 -3.622 0.128 -2.668 -4.226 1.648 -3.329 -3.632 0.465 -4.027 -1.452 3.054 -3.902 -0.356 -2.497 ML 25 23 6 28 4 1 19 80 101 -4.293 -4.476 -0.330 -3.205 -0.270 -0.546 -0.900 0.964 MR 26 23 6 28 4 1 17 80 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 15 79 100 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 20 82 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 20 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - A - - - ML 30 29 6 32 3 1 20 78 98 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 31 29 6 32 3 0 15 77 97 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 19 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 33 32 3 35 3 1 19 77 97 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 34 32 3 35 3 0 14 76 96 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 19 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 36 35 3 38 3 1 19 76 96 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 37 35 3 38 3 0 13 75 95 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 39 38 3 41 3 1 18 75 95 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 40 38 3 41 3 0 12 73 94 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 42 41 3 44 3 1 17 74 94 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 43 41 3 44 3 0 12 72 93 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 16 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 45 44 3 47 3 1 17 73 93 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 46 44 3 47 3 0 11 71 92 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 16 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 48 47 3 50 3 1 16 72 92 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 49 47 3 50 3 0 10 70 91 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 51 50 3 53 3 1 15 71 91 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 52 50 3 53 3 0 9 69 90 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - G - - - ML 54 53 3 56 3 1 14 70 90 -7.905 -0.021 -6.559 0.162 -1.543 1.013 -0.945 D 55 53 3 56 3 0 9 68 89 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 13 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - A - - - ML 57 56 3 59 3 1 14 69 89 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 58 56 3 59 3 0 8 67 88 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - a - - - ML 60 59 3 62 3 1 13 68 88 -7.905 -0.021 -6.559 0.995 -1.001 -1.076 0.046 D 61 59 3 62 3 0 7 66 86 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - A - - - ML 63 62 3 65 3 1 12 67 87 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 64 62 3 65 3 0 7 65 85 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 11 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - a - - - ML 66 65 3 68 3 1 12 66 86 -7.905 -0.021 -6.559 0.995 -1.001 -1.076 0.046 D 67 65 3 68 3 0 6 64 84 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 10 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 69 68 3 71 3 1 11 65 85 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 70 68 3 71 3 0 5 63 83 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 10 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - C - - - ML 72 71 3 74 3 1 10 64 84 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 73 71 3 74 3 0 5 62 82 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 9 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 75 74 3 77 3 1 10 63 83 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 76 74 3 77 3 0 4 61 81 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 8 64 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - G - - - ML 78 77 3 80 3 1 9 61 81 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 79 77 3 80 3 0 3 60 80 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - A - - - ML 81 80 3 83 3 1 8 60 80 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 82 80 3 83 3 0 3 59 79 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 7 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - C - - - ML 84 83 3 86 3 1 8 59 79 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 85 83 3 86 3 0 2 58 78 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - C - - - ML 87 86 3 89 3 1 7 58 78 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 88 86 3 89 3 0 1 57 77 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - U - - - ML 90 89 3 92 3 1 6 57 77 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 91 89 3 92 3 0 1 56 76 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - G - - - ML 93 92 3 95 3 1 6 56 76 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 94 92 3 95 3 0 0 55 75 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - A - - - ML 96 95 3 98 3 1 5 55 75 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 97 95 3 98 3 0 0 54 74 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - U - - - ML 99 98 3 101 3 1 5 54 74 -7.905 -0.021 -6.559 -0.728 -0.092 -1.476 1.069 D 100 98 3 101 3 0 0 53 73 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - U - - - ML 102 101 3 104 3 1 4 53 73 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 103 101 3 104 3 0 0 52 72 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - U - - - ML 105 104 3 107 3 1 4 52 72 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 106 104 3 107 3 0 0 51 70 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - G - - - ML 108 107 3 110 3 1 3 51 71 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 109 107 3 110 3 0 0 50 69 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - A - - - ML 111 110 3 113 3 1 3 50 70 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 112 110 3 113 3 0 0 48 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - A - - - ML 114 113 3 116 3 1 2 49 69 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 115 113 3 116 3 0 0 47 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - A - - - ML 117 116 3 119 3 1 2 48 67 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 118 116 3 119 3 0 0 46 66 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - A - - - ML 120 119 3 122 3 1 2 47 66 -2.869 -0.230 -6.559 1.692 -2.253 -1.897 -1.784 D 121 119 3 122 3 0 0 45 64 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 47 67 -1.816 -0.573 -4.516 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 123 122 3 125 3 1 1 45 65 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 124 122 3 125 3 0 0 44 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - u - - - ML 126 125 3 128 3 1 1 44 64 -7.905 -0.021 -6.559 0.047 -0.825 -1.172 0.970 D 127 125 3 128 3 0 0 43 62 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - A - - - ML 129 128 3 131 3 1 1 43 63 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 130 128 3 131 3 0 0 42 61 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - A - - - ML 132 131 3 134 3 1 1 42 61 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 133 131 3 134 3 0 0 41 60 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - U - - - ML 135 134 3 137 3 1 1 41 60 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 136 134 3 137 3 0 0 40 59 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 138 137 3 140 3 1 1 40 59 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 139 137 3 140 3 0 0 39 58 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - U - - - ML 141 140 3 143 3 1 1 39 58 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 142 140 3 143 3 0 0 37 57 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - G - - - ML 144 143 3 146 3 1 1 38 57 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 145 143 3 146 3 0 0 36 56 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 147 146 3 149 3 1 1 37 56 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 148 146 3 149 3 0 0 35 55 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - G - - - ML 150 149 3 152 3 1 1 36 55 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 151 149 3 152 3 0 0 34 54 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 153 152 3 155 3 1 1 34 54 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 154 152 3 155 3 0 0 33 53 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - A - - - ML 156 155 3 158 3 1 1 33 53 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 157 155 3 158 3 0 0 32 52 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - U - - - ML 159 158 3 161 3 1 1 32 52 -7.905 -0.230 -2.803 -1.377 -1.393 -2.105 1.586 D 160 158 3 161 3 0 0 31 50 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 162 161 3 164 3 1 1 31 51 -7.700 -0.025 -6.354 1.577 -1.848 -1.532 -1.343 D 163 161 3 164 3 0 0 30 49 -7.297 -2.810 -0.233 IL 164 164 3 164 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - A - - - ML 165 164 3 167 3 1 1 30 49 -7.700 -0.025 -6.354 1.577 -1.848 -1.532 -1.343 D 166 164 3 167 3 0 0 29 48 -7.297 -0.549 -1.688 IL 167 167 3 167 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - u - - - ML 168 167 3 170 3 1 1 29 48 -7.905 -0.021 -6.559 -0.432 -0.848 -0.337 0.935 D 169 167 3 170 3 0 0 28 47 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 171 170 3 173 3 1 1 28 47 -7.905 -0.021 -6.559 -0.728 -0.092 -1.476 1.069 D 172 170 3 173 3 0 0 27 46 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - A - - - ML 174 173 3 176 3 1 1 27 46 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 175 173 3 176 3 0 0 26 45 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 177 176 3 179 3 1 1 26 45 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 178 176 3 179 3 0 0 25 44 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - A - - - ML 180 179 3 182 3 1 1 25 44 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 181 179 3 182 3 0 0 24 43 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - A - - - ML 183 182 3 185 3 1 1 24 42 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 184 182 3 185 3 0 0 23 41 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - C - - - ML 186 185 3 188 3 1 1 22 41 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 187 185 3 188 3 0 0 21 40 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - g - - - ML 189 188 3 191 3 1 1 21 40 -7.905 -0.021 -6.559 -0.396 -0.512 0.892 -0.551 D 190 188 3 191 3 0 0 20 39 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - C - - - ML 192 191 3 194 3 1 1 20 39 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 193 191 3 194 3 0 0 19 38 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - U - - - ML 195 194 3 197 3 1 1 19 37 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 196 194 3 197 3 0 0 18 37 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - C - - - ML 198 197 3 200 3 1 1 18 36 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 199 197 3 200 3 0 0 17 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - C - - - ML 201 200 3 203 3 1 1 16 35 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - U - - - ML 204 203 3 206 3 1 1 15 33 -7.905 -0.021 -6.559 -0.740 -0.136 -1.486 1.094 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - g - - - ML 207 206 3 209 3 1 1 13 32 -7.905 -0.021 -6.559 -0.490 -1.229 0.956 -0.117 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.125 -1.394 -0.184 -0.839 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoR25 ACC RF01600 DESC small nucleolar RNA snoR25 LENG 70 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:57:39 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01600/CM NSEQ 4 EFFN 1.925781 CKSUM 436320142 STATS LOCAL MSV -8.6087 0.71878 STATS LOCAL VITERBI -9.2908 0.71878 STATS LOCAL FORWARD -3.2255 0.71878 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.92268 1.81113 1.70643 1.35647 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 0.00000 * 1 2.73238 1.73927 2.46335 0.39432 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 2 2.73897 1.73942 2.46596 0.39332 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 3 1.86427 1.48757 1.60980 0.86954 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 4 2.47022 1.58331 2.19736 0.51242 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 5 0.19520 3.02828 2.77335 2.71093 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 6 0.19520 3.02828 2.77335 2.71093 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 7 2.41442 2.41220 2.92287 0.26503 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 8 2.47995 3.32542 0.19202 2.90035 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 9 0.19520 3.02828 2.77335 2.71093 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 10 2.41442 2.41220 2.92287 0.26503 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 11 2.47995 3.32542 0.19202 2.90035 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 12 0.19520 3.02828 2.77335 2.71093 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 13 1.28023 2.49705 0.66277 2.08523 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 14 0.19520 3.02828 2.77335 2.71093 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 15 0.68292 2.10214 2.15729 1.35858 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 16 0.19520 3.02828 2.77335 2.71093 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 17 0.68292 2.10214 2.15729 1.35858 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 18 0.19520 3.02828 2.77335 2.71093 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 19 2.59099 0.26106 3.16196 2.18503 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 20 0.19520 3.02828 2.77335 2.71093 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 21 2.47995 3.32542 0.19202 2.90035 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 22 0.19520 3.02828 2.77335 2.71093 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 23 2.59099 0.26106 3.16196 2.18503 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 24 2.59099 0.26106 3.16196 2.18503 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 25 2.41442 2.41220 2.92287 0.26503 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 26 2.47995 3.32542 0.19202 2.90035 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 27 0.19520 3.02828 2.77335 2.71093 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 28 1.92638 1.44893 2.44707 0.62931 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 29 2.41442 2.41220 2.92287 0.26503 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 30 2.41442 2.41220 2.92287 0.26503 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 31 2.47995 3.32542 0.19202 2.90035 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 32 0.19520 3.02828 2.77335 2.71093 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 33 0.19520 3.02828 2.77335 2.71093 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 34 0.19520 3.02828 2.77335 2.71093 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 35 0.19520 3.02828 2.77335 2.71093 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.20688 1.79846 3.84765 0.24034 1.54347 1.09861 0.40547 36 0.19520 3.02828 2.77335 2.71093 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 37 1.36012 1.98201 2.22590 0.69794 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 38 0.19520 3.02828 2.77335 2.71093 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 39 0.19520 3.02828 2.77335 2.71093 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 40 2.41442 2.41220 2.92287 0.26503 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 41 2.41442 2.41220 2.92287 0.26503 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 42 2.41442 2.41220 2.92287 0.26503 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 43 2.47995 3.32542 0.19202 2.90035 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 44 0.19520 3.02828 2.77335 2.71093 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 45 2.47995 3.32542 0.19202 2.90035 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 46 0.19520 3.02828 2.77335 2.71093 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 47 0.19520 3.02828 2.77335 2.71093 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 48 2.41442 2.41220 2.92287 0.26503 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.20688 3.84765 1.79846 1.46634 0.26236 1.09861 0.40547 49 0.27226 2.73254 2.50729 2.38812 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05113 3.69190 3.69190 1.46634 0.26236 2.27846 0.10808 50 0.27226 2.73254 2.50729 2.38812 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05113 3.69190 3.69190 1.46634 0.26236 0.22927 1.58531 51 1.71040 1.99827 1.62150 0.72147 52 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 52 1.92638 1.44893 2.44707 0.62931 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 53 0.19520 3.02828 2.77335 2.71093 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 54 2.41442 2.41220 2.92287 0.26503 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 55 0.19520 3.02828 2.77335 2.71093 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 56 0.19520 3.02828 2.77335 2.71093 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 57 2.59099 0.26106 3.16196 2.18503 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 58 1.69230 1.74717 0.74024 1.80401 59 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 59 2.59099 0.26106 3.16196 2.18503 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 60 2.41442 2.41220 2.92287 0.26503 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 61 2.59099 0.26106 3.16196 2.18503 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 62 2.59099 0.26106 3.16196 2.18503 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 63 1.93532 1.48052 2.45480 0.61208 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 64 1.75697 2.27216 0.69983 1.47983 65 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 65 0.59166 2.38888 1.51224 2.00659 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.18351 3.84765 1.92193 1.46634 0.26236 1.09861 0.40547 66 0.58254 2.36924 1.41166 2.26112 67 A - - > 1.38629 1.38629 1.38629 1.38629 0.04998 3.71413 3.71413 1.46634 0.26236 2.18156 0.11976 67 1.17812 1.47178 1.29213 1.67162 68 a - - > 1.38629 1.38629 1.38629 1.38629 0.04998 3.71413 3.71413 1.46634 0.26236 0.25584 1.48841 68 0.44582 2.64916 1.57640 2.49776 69 A - - > 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 69 0.44561 2.64986 1.57642 2.49869 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.04360 3.84765 3.84765 1.46634 0.26236 1.09861 0.40547 70 0.19520 3.02828 2.77335 2.71093 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.02204 3.82609 * 1.46634 0.26236 0.00000 * //