INFERNAL1/a [1.1.5 | Sep 2023] NAME DdR16 ACC RF01566 DESC Dictyostelium snoRNA DdR16 STATES 238 NODES 80 CLEN 78 W 164 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 02:41:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01566/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.558594 CKSUM 2000475545 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 73.30 NC 54.10 EFP7GF -7.1037 0.71863 ECMLC 0.64601 -9.70520 -0.12154 1600000 586099 0.002047 ECMGC 0.38357 -14.87778 -2.38776 1600000 48159 0.008306 ECMLI 0.47748 -9.06639 2.79670 1600000 346104 0.003467 ECMGI 0.44371 -5.78657 4.60668 1600000 40259 0.009936 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 164 250 -7.185 -7.392 -0.045 -5.806 IL 1 1 2 1 4 5 33 166 252 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 33 166 252 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 5 33 165 250 -5.572 -0.062 -5.572 0.387 -0.038 -0.744 0.164 D 4 2 3 5 3 2 28 161 247 -11.551 -1.585 -0.585 IL 5 5 3 5 3 7 34 171 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 5 32 163 249 -5.572 -0.062 -5.572 0.443 -0.851 -0.874 0.623 D 7 5 3 8 3 2 28 160 246 -11.551 -1.585 -0.585 IL 8 8 3 8 3 6 33 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 5 31 162 248 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 10 8 3 11 3 1 27 159 244 -11.551 -1.585 -0.585 IL 11 11 3 11 3 6 33 168 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 4 30 161 246 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 13 11 3 14 3 1 26 158 243 -11.551 -1.585 -0.585 IL 14 14 3 14 3 5 32 167 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 4 29 159 245 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 16 14 3 17 3 1 25 156 241 -11.551 -1.585 -0.585 IL 17 17 3 17 3 5 31 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 4 29 158 243 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 19 17 3 20 3 1 25 155 240 -11.551 -1.585 -0.585 IL 20 20 3 20 3 5 30 164 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 3 28 157 242 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 22 20 3 23 3 0 24 154 239 -11.551 -1.585 -0.585 IL 23 23 3 23 3 4 29 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 3 27 155 240 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 25 23 3 26 3 0 23 152 237 -11.551 -1.585 -0.585 IL 26 26 3 26 3 4 29 162 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 2 26 154 239 -2.637 -0.289 -5.572 -1.731 -2.480 1.723 -2.196 D 28 26 3 29 3 0 23 151 236 -11.551 -1.585 -0.585 IL 29 29 3 29 3 2 26 154 239 -5.110 -0.043 -12.754 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - A - - - ML 30 29 3 32 3 1 25 153 238 -5.572 -0.294 -2.613 1.704 -2.188 -1.929 -1.942 D 31 29 3 32 3 0 22 150 235 -11.551 -1.585 -0.585 IL 32 32 3 32 3 3 28 160 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - A - - - ML 33 32 3 35 3 2 25 152 237 -5.351 -0.072 -5.351 1.551 -1.672 -1.400 -1.411 D 34 32 3 35 3 0 22 149 233 -13.255 -3.290 -0.156 IL 35 35 3 35 3 3 27 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 36 35 3 38 3 2 24 151 235 -5.351 -0.072 -5.351 -1.381 -1.989 1.612 -1.700 D 37 35 3 38 3 0 21 149 233 -13.255 -0.330 -2.290 IL 38 38 3 38 3 2 26 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - U - - - ML 39 38 3 41 3 1 24 149 234 -5.572 -0.062 -5.572 -1.108 0.095 -1.280 1.040 D 40 38 3 41 3 0 19 146 230 -11.551 -1.585 -0.585 IL 41 41 3 41 3 2 25 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - A - - - ML 42 41 3 44 3 1 23 148 232 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 43 41 3 44 3 0 18 145 229 -11.551 -1.585 -0.585 IL 44 44 3 44 3 2 25 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - a - - - ML 45 44 3 47 3 1 22 147 231 -2.637 -0.289 -5.572 0.910 -0.926 -0.923 0.095 D 46 44 3 47 3 0 18 143 227 -11.551 -1.585 -0.585 IL 47 47 3 47 3 2 23 148 232 -0.985 -1.015 -13.727 0.000 0.000 0.000 0.000 [ MATL 16 ] 19 - U - - - ML 48 47 3 50 3 1 21 145 229 -5.572 -0.062 -5.572 -1.110 0.082 -1.282 1.047 D 49 47 3 50 3 0 17 142 226 -11.551 -1.585 -0.585 IL 50 50 3 50 3 2 23 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - U - - - ML 51 50 3 53 3 1 21 144 228 -5.572 -0.062 -5.572 -1.118 0.032 -1.290 1.076 D 52 50 3 53 3 0 16 141 224 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 22 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - a - - - ML 54 53 3 56 3 1 20 143 226 -5.572 -0.062 -5.572 0.425 -0.102 -0.741 0.173 D 55 53 3 56 3 0 16 139 223 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 22 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - a - - - ML 57 56 3 59 3 1 19 141 225 -5.572 -0.062 -5.572 0.877 -0.915 -0.912 0.140 D 58 56 3 59 3 0 15 138 221 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 21 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - A - - - ML 60 59 3 62 3 1 19 140 223 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 61 59 3 62 3 0 14 137 220 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 20 146 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - C - - - ML 63 62 3 65 3 1 18 139 222 -5.572 -0.062 -5.572 -1.238 1.044 -1.420 0.190 D 64 62 3 65 3 0 14 135 218 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 20 145 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - U - - - ML 66 65 3 68 3 1 18 137 220 -5.572 -0.062 -5.572 -1.108 0.095 -1.280 1.040 D 67 65 3 68 3 0 13 134 217 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 19 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - C - - - ML 69 68 3 71 3 1 17 136 219 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 70 68 3 71 3 0 12 133 215 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 19 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - A - - - ML 72 71 3 74 3 1 16 135 217 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 73 71 3 74 3 0 12 131 214 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 18 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - G - - - ML 75 74 3 77 3 1 16 133 216 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 76 74 3 77 3 0 11 130 212 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 17 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - C - - - ML 78 77 3 80 3 1 15 132 214 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 79 77 3 80 3 0 11 129 211 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 17 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - U - - - ML 81 80 3 83 3 1 15 131 213 -2.613 -0.294 -5.572 -1.668 -1.341 -1.827 1.589 D 82 80 3 83 3 0 10 127 209 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 15 131 214 -0.986 -1.015 -13.754 0.000 0.000 0.000 0.000 [ MATL 28 ] 33 - C - - - ML 84 83 3 86 3 1 14 129 212 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 85 83 3 86 3 0 9 126 208 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 15 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - U - - - ML 87 86 3 89 3 1 13 128 210 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 88 86 3 89 3 0 9 125 206 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 15 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - a - - - ML 90 89 3 92 3 1 13 126 208 -5.572 -0.062 -5.572 0.881 0.004 -0.973 -0.631 D 91 89 3 92 3 0 8 123 205 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 14 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - U - - - ML 93 92 3 95 3 1 12 125 207 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 94 92 3 95 3 0 8 122 203 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 14 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - G - - - ML 96 95 3 98 3 1 12 124 205 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 97 95 3 98 3 0 7 120 202 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 13 130 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - A - - - ML 99 98 3 101 3 1 11 122 204 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 100 98 3 101 3 0 7 119 200 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 13 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - a - - - ML 102 101 3 104 3 1 11 121 202 -5.572 -0.062 -5.572 0.877 -0.915 -0.912 0.140 D 103 101 3 104 3 0 6 118 199 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 12 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - a - - - ML 105 104 3 107 3 1 10 120 201 -5.572 -0.062 -5.572 0.889 -0.009 -0.974 -0.633 D 106 104 3 107 3 0 6 116 197 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 11 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - u - - - ML 108 107 3 110 3 1 10 118 199 -5.572 -0.062 -5.572 0.019 -0.883 -0.965 0.950 D 109 107 3 110 3 0 5 115 196 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 11 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 42 - C - - - ML 111 110 3 113 3 1 9 117 198 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 112 110 3 113 3 0 5 114 194 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 10 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 43 - U - - - ML 114 113 3 116 3 1 9 115 196 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 115 113 3 116 3 0 4 112 193 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 10 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 44 - G - - - ML 117 116 3 119 3 1 8 114 195 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 118 116 3 119 3 0 4 111 191 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 9 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - U - - - ML 120 119 3 122 3 1 8 113 193 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 121 119 3 122 3 0 4 109 189 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 9 119 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - G - - - ML 123 122 3 125 3 1 7 111 191 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 124 122 3 125 3 0 3 108 188 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 8 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - A - - - ML 126 125 3 128 3 1 6 110 190 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 127 125 3 128 3 0 3 107 186 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 8 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 48 - U - - - ML 129 128 3 131 3 1 6 108 188 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 130 128 3 131 3 0 2 105 185 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 7 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 49 - u - - - ML 132 131 3 134 3 1 5 107 187 -5.572 -0.062 -5.572 -0.823 -0.909 0.009 0.923 D 133 131 3 134 3 0 2 104 183 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 6 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 50 - A - - - ML 135 134 3 137 3 1 4 106 185 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 136 134 3 137 3 0 2 103 182 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 5 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 51 - c - - - ML 138 137 3 140 3 1 4 104 183 -5.572 -0.294 -2.613 -0.975 0.911 -0.010 -0.695 D 139 137 3 140 3 0 1 102 181 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 5 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 52 - U - - - ML 141 140 3 143 3 1 3 103 182 -5.351 -0.072 -5.351 -1.269 -1.009 -1.404 1.438 D 142 140 3 143 3 0 1 101 180 -13.255 -0.330 -2.290 IL 143 143 3 143 3 1 4 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 53 - C - - - ML 144 143 3 146 3 1 3 101 180 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 145 143 3 146 3 0 0 98 177 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 4 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 54 - A - - - ML 147 146 3 149 3 1 2 100 179 -5.572 -0.294 -2.613 1.704 -2.188 -1.929 -1.942 D 148 146 3 149 3 0 0 97 176 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 3 107 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - A - - - ML 150 149 3 152 3 1 2 99 177 -5.351 -0.072 -5.351 1.551 -1.672 -1.400 -1.411 D 151 149 3 152 3 0 0 97 175 -13.255 -0.330 -2.290 IL 152 152 3 152 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - U - - - ML 153 152 3 155 3 1 1 97 175 -5.572 -0.531 -1.802 -1.668 -1.341 -1.827 1.589 D 154 152 3 155 3 0 0 95 173 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 2 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - U - - - ML 156 155 3 158 3 1 1 96 174 -5.127 -0.085 -5.127 -0.924 -0.717 -1.022 1.246 D 157 155 3 158 3 0 0 94 172 -13.934 -0.197 -2.968 IL 158 158 3 158 3 1 2 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - u - - - ML 159 158 3 161 3 1 1 94 172 -5.572 -0.062 -5.572 0.007 -0.885 -0.969 0.958 D 160 158 3 161 3 0 0 91 168 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 59 - G - - - ML 162 161 3 164 3 1 1 93 170 -5.572 -0.062 -5.572 -0.888 -1.171 1.035 -0.050 D 163 161 3 164 3 0 0 89 166 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 100 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 60 - a - - - ML 165 164 3 167 3 1 1 91 169 -5.572 -0.062 -5.572 0.877 -0.915 -0.912 0.140 D 166 164 3 167 3 0 0 88 165 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - U - - - ML 168 167 3 170 3 1 1 90 167 -5.572 -0.294 -2.613 -1.668 -1.341 -1.827 1.589 D 169 167 3 170 3 0 0 86 163 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 62 - U - - - ML 171 170 3 173 3 1 1 89 165 -5.351 -0.072 -5.351 -1.269 -1.009 -1.404 1.438 D 172 170 3 173 3 0 0 84 160 -13.255 -3.290 -0.156 IL 173 173 3 173 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 63 - U - - - ML 174 173 3 176 3 1 1 87 164 -5.351 -0.072 -5.351 -1.269 -1.009 -1.404 1.438 D 175 173 3 176 3 0 0 83 159 -13.255 -3.290 -0.156 IL 176 176 3 176 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 64 - C - - - ML 177 176 3 179 3 1 1 85 162 -5.351 -0.072 -5.351 -1.471 1.480 -1.637 -0.921 D 178 176 3 179 3 0 0 83 159 -13.255 -0.330 -2.290 IL 179 179 3 179 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 65 - U - - - ML 180 179 3 182 3 1 1 84 160 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 181 179 3 182 3 0 0 80 156 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 66 - C - - - ML 183 182 3 185 3 1 1 82 158 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 184 182 3 185 3 0 0 78 154 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 67 - A - - - ML 186 185 3 188 3 1 1 81 156 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 187 185 3 188 3 0 0 77 152 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 88 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 68 - C - - - ML 189 188 3 191 3 1 1 79 154 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 190 188 3 191 3 0 0 75 150 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 69 - G - - - ML 192 191 3 194 3 1 1 77 152 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 193 191 3 194 3 0 0 73 148 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 70 - A - - - ML 195 194 3 197 3 1 1 76 150 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 196 194 3 197 3 0 0 72 146 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 71 - C - - - ML 198 197 3 200 3 1 1 74 148 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 199 197 3 200 3 0 0 70 144 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 72 - A - - - ML 201 200 3 203 3 1 1 72 146 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 202 200 3 203 3 0 0 68 141 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 73 - G - - - ML 204 203 3 206 3 1 1 70 144 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 205 203 3 206 3 0 0 66 139 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 74 - U - - - ML 207 206 3 209 3 1 1 68 142 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 208 206 3 209 3 0 0 64 137 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 75 - C - - - ML 210 209 3 212 3 1 1 67 139 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 211 209 3 212 3 0 0 62 134 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 76 - U - - - ML 213 212 3 215 3 1 1 65 137 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 214 212 3 215 3 0 0 60 132 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 77 - U - - - ML 216 215 3 218 3 1 1 63 135 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 217 215 3 218 3 0 0 58 129 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 78 - C - - - ML 219 218 3 221 3 1 1 60 132 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 220 218 3 221 3 0 0 55 126 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 79 - U - - - ML 222 221 3 224 3 1 1 58 129 -5.572 -0.062 -5.572 -1.668 -1.341 -1.827 1.589 D 223 221 3 224 3 0 0 53 123 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 80 - G - - - ML 225 224 3 227 3 1 1 56 126 -5.572 -0.062 -5.572 -1.731 -2.480 1.723 -2.196 D 226 224 3 227 3 0 0 49 119 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 81 - A - - - ML 228 227 3 230 3 1 1 53 122 -5.572 -0.062 -5.572 1.704 -2.188 -1.929 -1.942 D 229 227 3 230 3 0 0 45 114 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 82 - C - - - ML 231 230 3 233 3 1 1 49 118 -5.572 -0.062 -5.572 -1.917 1.631 -2.115 -1.297 D 232 230 3 233 3 0 0 32 101 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 83 - A - - - ML 234 233 3 236 2 1 1 1 1 * 0.000 1.704 -2.188 -1.929 -1.942 D 235 233 3 236 2 0 0 0 0 * 0.000 IL 236 236 3 236 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 79 ] - - - - - - E 237 236 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DdR16 ACC RF01566 DESC Dictyostelium snoRNA DdR16 LENG 78 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 02:41:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01566/CM NSEQ 4 EFFN 2.558594 CKSUM 2000475545 STATS LOCAL MSV -8.5872 0.71863 STATS LOCAL VITERBI -9.6047 0.71863 STATS LOCAL FORWARD -3.2747 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26653 1.50759 1.63936 1.19520 1.38629 1.38629 1.38629 1.38629 0.02560 4.98033 3.99516 0.39730 1.11515 0.00000 * 1 1.11788 1.41252 1.90168 1.27231 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 2 1.07928 1.97587 1.99176 0.95434 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 3 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 4 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 5 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 6 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 7 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 8 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 9 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.20056 1.82812 3.86254 0.02938 3.54209 1.09861 0.40547 10 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.20390 3.86254 1.81130 1.46634 0.26236 1.09861 0.40547 11 0.31089 2.54491 2.35698 2.36422 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 2.28009 0.10789 12 2.34369 2.76518 0.26906 2.56442 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 0.22885 1.58694 13 2.15417 1.32032 2.27333 0.66557 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 14 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 15 0.75574 2.02846 2.02609 1.32069 - a - - : 1.38629 1.38629 1.38629 1.38629 0.20056 1.82812 3.86254 0.70353 0.68287 1.09861 0.40547 16 2.15552 1.32939 2.27471 0.66031 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 17 2.16120 1.36428 2.28048 0.64053 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 18 1.09150 1.45717 1.90013 1.26640 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 19 0.77869 2.02019 2.01845 1.28915 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 20 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 21 2.24440 0.66291 2.37031 1.25454 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 22 2.15417 1.32032 2.27333 0.66557 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 23 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 24 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 25 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 26 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 27 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.20390 1.81130 3.86254 0.70333 0.68306 1.09861 0.40547 28 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 29 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 30 0.77545 1.38356 2.06051 1.82370 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 31 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 32 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 33 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 34 0.77869 2.02019 2.01845 1.28915 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 35 0.76977 1.39251 2.06150 1.82531 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 36 1.37281 1.99812 2.05512 0.72786 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 37 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 38 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 39 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 40 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 41 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 42 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 43 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 44 1.95661 2.01655 1.38029 0.74645 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 45 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 46 2.06238 0.75490 1.39297 1.86783 - c - - : 1.38629 1.38629 1.38629 1.38629 0.20390 3.86254 1.81130 1.46634 0.26236 1.09861 0.40547 47 2.26595 2.08552 2.35949 0.38926 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 0.22885 1.58694 48 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 49 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.20390 3.86254 1.81130 1.46634 0.26236 1.09861 0.40547 50 0.31089 2.54491 2.35698 2.36422 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 0.22885 1.58694 51 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.36788 3.86254 1.24901 1.46634 0.26236 1.09861 0.40547 52 2.02706 1.88309 2.09500 0.52241 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05895 3.55360 3.55360 1.46634 0.26236 0.13676 2.05713 53 1.38168 1.99944 2.05809 0.72209 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 54 2.00209 2.19824 0.66864 1.42070 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 55 0.77869 2.02019 2.01845 1.28915 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 56 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.20390 3.86254 1.81130 1.46634 0.26236 1.09861 0.40547 57 2.26595 2.08552 2.35949 0.38926 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 2.28009 0.10789 58 2.26595 2.08552 2.35949 0.38926 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 2.28009 0.10789 59 2.40616 0.36045 2.52073 2.02438 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05025 3.70889 3.70889 1.46634 0.26236 0.22885 1.58694 60 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 61 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 62 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 63 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 64 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 65 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 66 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 67 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 68 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 69 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 70 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 71 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 72 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 73 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 74 2.54224 2.31551 2.65295 0.28482 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 75 2.58623 3.10532 0.19196 2.90868 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 76 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 77 2.71528 0.25572 2.85232 2.28527 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04294 3.86254 3.86254 1.46634 0.26236 1.09861 0.40547 78 0.20524 2.90320 2.72327 2.73268 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //