INFERNAL1/a [1.1.5 | Sep 2023] NAME DdR11 ACC RF01561 DESC Dictyostelium snoRNA DdR11 STATES 232 NODES 78 CLEN 76 W 163 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 00:08:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01561/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.375977 CKSUM 1217678339 NULL 0.000 0.000 0.000 0.000 GA 65.00 TC 80.70 NC 44.60 EFP7GF -8.8918 0.71861 ECMLC 0.67805 -8.81170 0.06866 1600000 494558 0.002426 ECMGC 0.37774 -17.65865 -3.91315 1600000 71943 0.005560 ECMLI 0.53684 -8.56883 1.94497 1600000 339197 0.003538 ECMGI 0.43189 -8.01021 3.20884 1600000 50860 0.007865 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 163 249 -7.120 -7.327 -0.047 -5.741 IL 1 1 2 1 4 4 32 165 251 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 31 165 251 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 4 31 163 249 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 4 2 3 5 3 0 27 160 246 -11.551 -1.585 -0.585 IL 5 5 3 5 3 5 33 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 3 30 162 248 -5.516 -0.064 -5.516 -1.031 0.229 -1.199 0.928 D 7 5 3 8 3 0 26 159 245 -11.551 -1.585 -0.585 IL 8 8 3 8 3 5 32 168 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 3 29 161 247 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 10 8 3 11 3 0 25 157 243 -11.551 -1.585 -0.585 IL 11 11 3 11 3 4 31 167 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 3 29 159 245 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 13 11 3 14 3 0 24 156 242 -11.551 -1.585 -0.585 IL 14 14 3 14 3 4 30 165 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 3 28 158 244 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 16 14 3 17 3 0 24 155 240 -11.551 -1.585 -0.585 IL 17 17 3 17 3 4 30 164 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 2 27 157 242 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 19 17 3 20 3 0 23 153 239 -11.551 -1.585 -0.585 IL 20 20 3 20 3 3 29 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 2 26 155 241 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 22 20 3 23 3 0 22 152 237 -11.551 -1.585 -0.585 IL 23 23 3 23 3 3 28 161 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 2 26 154 239 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 25 23 3 26 3 0 22 151 236 -11.551 -1.585 -0.585 IL 26 26 3 26 3 3 27 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 2 25 153 238 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 28 26 3 29 3 0 21 150 234 -11.551 -1.585 -0.585 IL 29 29 3 29 3 2 26 159 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 24 151 236 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 31 29 3 32 3 0 20 148 233 -11.551 -1.585 -0.585 IL 32 32 3 32 3 2 26 158 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 23 150 235 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 34 32 3 35 3 0 20 147 232 -11.551 -1.585 -0.585 IL 35 35 3 35 3 2 25 156 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 22 149 233 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 37 35 3 38 3 0 19 146 230 -11.551 -1.585 -0.585 IL 38 38 3 38 3 2 24 155 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 21 147 232 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 40 38 3 41 3 0 19 145 229 -11.551 -1.585 -0.585 IL 41 41 3 41 3 2 23 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 42 41 3 44 3 1 20 146 231 -5.516 -0.373 -2.280 -1.801 1.597 -1.991 -1.199 D 43 41 3 44 3 0 18 144 228 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 23 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 45 44 3 47 3 1 20 145 229 -5.223 -0.079 -5.223 -1.232 1.368 -1.374 -0.718 D 46 44 3 47 3 0 18 143 227 -13.479 -0.278 -2.514 IL 47 47 3 47 3 1 22 151 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - u - - - ML 48 47 3 50 3 1 19 144 228 -5.516 -0.064 -5.516 0.210 -0.818 -0.862 0.788 D 49 47 3 50 3 0 15 140 224 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 21 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 51 50 3 53 3 1 19 142 226 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 52 50 3 53 3 0 14 139 223 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 20 149 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 18 141 225 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 55 53 3 56 3 0 14 138 221 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 20 147 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 17 140 223 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 58 56 3 59 3 0 13 136 220 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 19 146 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 60 59 3 62 3 1 17 138 222 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 61 59 3 62 3 0 12 135 218 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 18 145 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 16 137 220 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 64 62 3 65 3 0 12 134 217 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 18 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 16 136 219 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 67 65 3 68 3 0 11 132 215 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 17 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - A - - - ML 69 68 3 71 3 1 15 134 217 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 70 68 3 71 3 0 11 131 214 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 17 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 14 133 216 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 73 71 3 74 3 0 10 130 212 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 16 139 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 14 131 214 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 76 74 3 77 3 0 9 128 211 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 15 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 78 77 3 80 3 1 13 130 213 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 79 77 3 80 3 0 9 127 209 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 15 137 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 13 129 211 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 82 80 3 83 3 0 8 126 208 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 14 135 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 84 83 3 86 3 1 12 127 210 -5.516 -0.064 -5.516 0.105 -1.386 1.038 -1.032 D 85 83 3 86 3 0 8 124 206 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 14 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 87 86 3 89 3 1 11 126 208 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 88 86 3 89 3 0 7 123 205 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 13 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - C - - - ML 90 89 3 92 3 1 11 125 207 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 91 89 3 92 3 0 6 121 203 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 12 131 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - C - - - ML 93 92 3 95 3 1 10 123 205 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 94 92 3 95 3 0 6 120 201 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 12 130 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - A - - - ML 96 95 3 98 3 1 10 122 203 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 97 95 3 98 3 0 5 119 200 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 11 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - C - - - ML 99 98 3 101 3 1 9 121 202 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 100 98 3 101 3 0 5 117 198 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 11 127 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 1 9 119 200 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 103 101 3 104 3 0 4 116 197 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 10 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 105 104 3 107 3 1 8 118 199 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 106 104 3 107 3 0 4 114 195 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 10 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 108 107 3 110 3 1 8 116 197 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 109 107 3 110 3 0 3 113 194 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 9 123 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - G - - - ML 111 110 3 113 3 1 7 115 196 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 112 110 3 113 3 0 3 112 192 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 8 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 114 113 3 116 3 1 7 114 194 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 115 113 3 116 3 0 3 110 190 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 8 120 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - C - - - ML 117 116 3 119 3 1 6 112 192 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 118 116 3 119 3 0 2 109 189 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 7 119 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 120 119 3 122 3 1 6 111 191 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 121 119 3 122 3 0 2 107 187 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 7 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - A - - - ML 123 122 3 125 3 1 5 109 189 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 124 122 3 125 3 0 1 106 186 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 7 116 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - C - - - ML 126 125 3 128 3 1 5 108 188 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 127 125 3 128 3 0 1 104 184 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 6 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 129 128 3 131 3 1 4 106 186 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 130 128 3 131 3 0 0 103 182 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 6 113 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - A - - - ML 132 131 3 134 3 1 4 105 184 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 133 131 3 134 3 0 0 102 181 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 5 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 135 134 3 137 3 1 4 104 183 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 136 134 3 137 3 0 0 100 179 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 5 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - a - - - ML 138 137 3 140 3 1 3 102 181 -5.516 -0.064 -5.516 0.712 0.199 -0.903 -0.557 D 139 137 3 140 3 0 0 99 177 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 4 109 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 141 140 3 143 3 1 3 101 179 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 142 140 3 143 3 0 0 97 176 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 4 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - A - - - ML 144 143 3 146 3 1 2 99 178 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 145 143 3 146 3 0 0 96 174 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 4 106 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - c - - - ML 147 146 3 149 3 1 2 98 176 -5.516 -0.064 -5.516 0.210 0.748 -1.000 -0.590 D 148 146 3 149 3 0 0 94 172 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 3 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - u - - - ML 150 149 3 152 3 1 2 96 174 -5.516 -0.064 -5.516 -1.027 0.297 -1.195 0.883 D 151 149 3 152 3 0 0 93 170 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 3 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 153 152 3 155 3 1 2 95 173 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 154 152 3 155 3 0 0 91 169 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 3 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - U - - - ML 156 155 3 158 3 1 1 93 171 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 157 155 3 158 3 0 0 90 167 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 2 100 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - G - - - ML 159 158 3 161 3 1 1 92 169 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 160 158 3 161 3 0 0 88 165 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 2 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - U - - - ML 162 161 3 164 3 1 1 90 167 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 163 161 3 164 3 0 0 87 163 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 2 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 165 164 3 167 3 1 1 89 165 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 166 164 3 167 3 0 0 85 161 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 2 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - C - - - ML 168 167 3 170 3 1 1 87 164 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 169 167 3 170 3 0 0 83 160 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - C - - - ML 171 170 3 173 3 1 1 85 162 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 172 170 3 173 3 0 0 82 158 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - U - - - ML 174 173 3 176 3 1 1 84 160 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 175 173 3 176 3 0 0 80 156 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - U - - - ML 177 176 3 179 3 1 1 82 158 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 178 176 3 179 3 0 0 79 154 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - a - - - ML 180 179 3 182 3 1 1 81 156 -5.516 -0.064 -5.516 0.703 -1.183 0.452 -0.829 D 181 179 3 182 3 0 0 77 152 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 88 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - u - - - ML 183 182 3 185 3 1 1 79 154 -5.516 -0.064 -5.516 0.210 -0.818 -0.862 0.788 D 184 182 3 185 3 0 0 76 150 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 186 185 3 188 3 1 1 77 152 -5.516 -0.373 -2.280 -1.561 -1.252 -1.715 1.554 D 187 185 3 188 3 0 0 75 149 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - U - - - ML 189 188 3 191 3 1 1 76 151 -5.223 -0.079 -5.223 -1.064 -0.836 -1.180 1.334 D 190 188 3 191 3 0 0 74 148 -13.479 -0.278 -2.514 IL 191 191 3 191 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - u - - - ML 192 191 3 194 3 1 1 74 148 -5.516 -0.064 -5.516 0.210 -0.818 -0.862 0.788 D 193 191 3 194 3 0 0 70 144 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - U - - - ML 195 194 3 197 3 1 1 72 146 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 196 194 3 197 3 0 0 69 142 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 198 197 3 200 3 1 1 70 144 -5.516 -0.343 -2.398 1.670 -2.051 -1.791 -1.801 D 199 197 3 200 3 0 0 67 140 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - U - - - ML 201 200 3 203 3 1 1 69 142 -5.251 -0.078 -5.251 -1.108 -0.873 -1.228 1.358 D 202 200 3 203 3 0 0 66 139 -13.383 -0.299 -2.417 IL 203 203 3 203 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - U - - - ML 204 203 3 206 3 1 1 67 140 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 205 203 3 206 3 0 0 63 135 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 69 - G - - - ML 207 206 3 209 3 1 1 65 137 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 208 206 3 209 3 0 0 60 132 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 70 - u - - - ML 210 209 3 212 3 1 1 63 135 -5.516 -0.064 -5.516 -0.743 -0.863 0.229 0.749 D 211 209 3 212 3 0 0 58 129 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 71 - C - - - ML 213 212 3 215 3 1 1 61 132 -5.516 -0.064 -5.516 -1.801 1.597 -1.991 -1.199 D 214 212 3 215 3 0 0 56 127 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 72 - U - - - ML 216 215 3 218 3 1 1 58 129 -5.516 -0.064 -5.516 -1.561 -1.252 -1.715 1.554 D 217 215 3 218 3 0 0 53 123 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 73 - G - - - ML 219 218 3 221 3 1 1 56 126 -5.516 -0.064 -5.516 -1.642 -2.355 1.699 -2.069 D 220 218 3 221 3 0 0 50 119 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 74 - A - - - ML 222 221 3 224 3 1 1 53 123 -5.516 -0.064 -5.516 1.670 -2.051 -1.791 -1.801 D 223 221 3 224 3 0 0 45 114 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 75 - c - - - ML 225 224 3 227 3 1 1 49 118 -5.516 -0.064 -5.516 0.210 0.748 -1.000 -0.590 D 226 224 3 227 3 0 0 32 101 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 76 - a - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 0.695 -0.833 -0.828 0.330 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DdR11 ACC RF01561 DESC Dictyostelium snoRNA DdR11 LENG 76 MAXL 163 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 00:08:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01561/CM NSEQ 3 EFFN 2.375977 CKSUM 1217678339 STATS LOCAL MSV -8.1999 0.71861 STATS LOCAL VITERBI -9.4203 0.71861 STATS LOCAL FORWARD -3.3149 0.71861 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24540 1.41852 1.67798 1.26106 1.38629 1.38629 1.38629 1.38629 0.02680 4.93533 3.95016 0.39730 1.11515 0.00000 * 1 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 2 2.10086 1.22736 2.21719 0.74303 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 3 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 4 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 5 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 6 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 7 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 8 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 9 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 10 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 11 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 12 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 13 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 14 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.25838 3.82341 1.58063 1.46634 0.26236 1.09861 0.40547 15 2.24004 0.43826 2.33874 1.88426 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05505 3.62007 3.62007 1.46634 0.26236 0.19254 1.74217 16 1.24103 1.95322 1.98360 0.84043 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 17 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 18 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 19 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 20 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 21 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 22 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 23 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 24 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 25 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 26 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 27 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 28 1.31325 2.34706 0.66715 2.10178 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 29 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 30 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 31 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 32 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 33 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 34 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 35 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 36 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 37 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 38 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 39 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 40 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 41 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 42 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 43 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 44 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 45 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 46 0.89275 1.24851 2.01248 1.77265 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 47 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 48 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 49 1.24096 0.86790 2.07971 1.79520 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 50 2.09799 1.18031 2.21439 0.77459 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 51 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 52 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 53 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 54 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 55 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 56 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 57 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 58 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 59 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 60 0.89875 2.20651 1.07271 1.96072 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 61 1.24103 1.95322 1.98360 0.84043 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 62 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.25838 3.82341 1.58063 1.46634 0.26236 1.09861 0.40547 63 2.12406 1.96588 2.20430 0.46189 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05505 3.62007 3.62007 1.46634 0.26236 0.19254 1.74217 64 1.24103 1.95322 1.98360 0.84043 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 65 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 66 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.23773 3.82341 1.66213 1.46634 0.26236 1.09861 0.40547 67 2.15410 1.99134 2.23754 0.44510 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05395 3.63963 3.63963 1.46634 0.26236 0.20730 1.67543 68 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 69 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 70 1.90140 1.98465 1.22783 0.86682 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 71 2.63473 0.27909 2.76654 2.21722 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 72 2.46849 2.25438 2.57538 0.30894 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 73 2.52459 3.01843 0.20891 2.82067 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 74 0.22862 2.80783 2.62739 2.63439 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 75 1.24096 0.86790 2.07971 1.79520 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04469 3.82341 3.82341 1.46634 0.26236 1.09861 0.40547 76 0.90456 1.96396 1.96025 1.15786 - a - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //