INFERNAL1/a [1.1.5 | Sep 2023] NAME DdR10 ACC RF01560 DESC Dictyostelium snoRNA DdR10 STATES 247 NODES 83 CLEN 81 W 169 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 05:04:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01560/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.472656 CKSUM 1793948137 NULL 0.000 0.000 0.000 0.000 GA 48.00 TC 49.80 NC 43.30 EFP7GF -6.3484 0.71857 ECMLC 0.50101 -11.43883 0.74422 1600000 537092 0.002234 ECMGC 0.39356 -12.31323 0.95607 1600000 74140 0.005395 ECMLI 0.37217 -9.84804 5.15231 1600000 318944 0.003762 ECMGI 0.44067 -2.66223 8.23918 1600000 48793 0.008198 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 169 256 -7.155 -7.362 -0.046 -5.776 IL 1 1 2 1 4 4 35 171 258 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 34 171 257 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 4 34 170 256 -5.546 -0.063 -5.546 -0.797 -0.887 0.034 0.895 D 4 2 3 5 3 0 29 166 253 -11.551 -1.585 -0.585 IL 5 5 3 5 3 5 36 176 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 4 33 168 255 -5.546 -0.063 -5.546 0.041 -0.859 -0.934 0.923 D 7 5 3 8 3 0 29 165 251 -11.551 -1.585 -0.585 IL 8 8 3 8 3 5 35 174 261 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 3 32 167 253 -5.546 -0.063 -5.546 0.878 -1.214 0.240 -0.863 D 10 8 3 11 3 0 28 164 250 -11.551 -1.585 -0.585 IL 11 11 3 11 3 4 34 173 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 3 32 166 252 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 13 11 3 14 3 0 27 163 248 -11.551 -1.585 -0.585 IL 14 14 3 14 3 4 33 172 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 2 31 164 250 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 16 14 3 17 3 0 26 161 247 -11.551 -1.585 -0.585 IL 17 17 3 17 3 4 33 171 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 2 30 163 249 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 19 17 3 20 3 0 26 160 245 -11.551 -1.585 -0.585 IL 20 20 3 20 3 3 32 169 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 2 29 162 247 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 22 20 3 23 3 0 25 159 244 -11.551 -1.585 -0.585 IL 23 23 3 23 3 3 31 168 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 2 29 161 246 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 25 23 3 26 3 0 24 157 243 -11.551 -1.585 -0.585 IL 26 26 3 26 3 3 30 167 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 28 159 244 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 28 26 3 29 3 0 23 156 241 -11.551 -1.585 -0.585 IL 29 29 3 29 3 2 30 165 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 27 158 243 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 31 29 3 32 3 0 23 155 240 -11.551 -1.585 -0.585 IL 32 32 3 32 3 2 29 164 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 26 157 242 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 34 32 3 35 3 0 22 153 238 -11.551 -1.585 -0.585 IL 35 35 3 35 3 2 28 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - a - - - ML 36 35 3 38 3 1 26 155 240 -5.546 -0.063 -5.546 0.865 -0.895 -0.887 0.138 D 37 35 3 38 3 0 21 152 237 -11.551 -1.585 -0.585 IL 38 38 3 38 3 2 27 162 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - c - - - ML 39 38 3 41 3 1 25 154 239 -5.546 -0.063 -5.546 0.007 0.246 0.068 -0.394 D 40 38 3 41 3 0 20 151 235 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 27 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 24 153 237 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 43 41 3 44 3 0 20 149 234 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 26 159 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - a - - - ML 45 44 3 47 3 1 24 151 236 -5.546 -0.063 -5.546 0.549 0.431 -0.947 -0.576 D 46 44 3 47 3 0 19 148 232 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 25 158 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 23 150 234 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 49 47 3 50 3 0 18 147 231 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 25 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 22 149 233 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 52 50 3 53 3 0 18 145 229 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 24 155 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 22 147 231 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 55 53 3 56 3 0 17 144 228 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 23 154 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 21 146 230 -2.586 -0.300 -5.546 1.689 -2.124 -1.864 -1.876 D 58 56 3 59 3 0 16 142 226 -11.551 -1.585 -0.585 IL 59 59 3 59 3 2 22 148 232 -0.582 -1.591 -14.331 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - U - - - ML 60 59 3 62 3 1 20 144 228 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 61 59 3 62 3 0 15 141 225 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 22 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - C - - - ML 63 62 3 65 3 1 19 143 226 -2.659 -0.286 -5.546 -1.863 1.616 -2.057 -1.251 D 64 62 3 65 3 0 15 140 223 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 20 143 226 -5.057 -0.044 -12.701 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - a - - - ML 66 65 3 68 3 1 19 142 225 -5.546 -0.063 -5.546 0.838 -0.886 -0.880 0.173 D 67 65 3 68 3 0 14 138 222 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 20 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - u - - - ML 69 68 3 71 3 1 18 140 224 -5.546 -0.063 -5.546 0.041 -0.859 -0.934 0.923 D 70 68 3 71 3 0 13 137 220 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 20 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - a - - - ML 72 71 3 74 3 1 17 139 222 -5.546 -0.063 -5.546 0.838 -0.886 -0.880 0.173 D 73 71 3 74 3 0 13 136 219 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 19 145 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - u - - - ML 75 74 3 77 3 1 17 138 221 -5.546 -0.063 -5.546 0.041 -0.859 -0.934 0.923 D 76 74 3 77 3 0 12 134 217 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 18 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - G - - - ML 78 77 3 80 3 1 16 136 219 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 79 77 3 80 3 0 11 133 216 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 18 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - U - - - ML 81 80 3 83 3 1 15 135 218 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 82 80 3 83 3 0 11 132 214 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 17 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - C - - - ML 84 83 3 86 3 1 15 134 216 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 85 83 3 86 3 0 10 130 213 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 16 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - A - - - ML 87 86 3 89 3 1 14 132 215 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 88 86 3 89 3 0 10 129 211 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 16 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - A - - - ML 90 89 3 92 3 1 13 131 213 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 91 89 3 92 3 0 9 128 210 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 15 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - U - - - ML 93 92 3 95 3 1 13 130 212 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 94 92 3 95 3 0 8 126 208 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 14 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - U - - - ML 96 95 3 98 3 1 12 128 210 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 97 95 3 98 3 0 8 125 207 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 14 135 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - C - - - ML 99 98 3 101 3 1 12 127 209 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 100 98 3 101 3 0 7 124 205 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 13 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - C - - - ML 102 101 3 104 3 1 11 125 207 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 103 101 3 104 3 0 6 122 204 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 13 132 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - U - - - ML 105 104 3 107 3 1 10 124 206 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 106 104 3 107 3 0 6 121 202 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 12 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - U - - - ML 108 107 3 110 3 1 10 123 204 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 109 107 3 110 3 0 5 119 200 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 11 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - U - - - ML 111 110 3 113 3 1 9 121 202 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 112 110 3 113 3 0 5 118 199 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 11 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 42 - A - - - ML 114 113 3 116 3 1 9 120 201 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 115 113 3 116 3 0 4 117 197 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 10 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - A - - - ML 117 116 3 119 3 1 8 119 199 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 118 116 3 119 3 0 4 115 196 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 10 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - C - - - ML 120 119 3 122 3 1 8 117 198 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 121 119 3 122 3 0 3 114 194 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 9 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - a - - - ML 123 122 3 125 3 1 7 116 196 -5.546 -0.063 -5.546 0.876 -0.014 -0.946 -0.611 D 124 122 3 125 3 0 3 112 193 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 8 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - U - - - ML 126 125 3 128 3 1 6 114 195 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 127 125 3 128 3 0 2 111 191 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 8 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - G - - - ML 129 128 3 131 3 1 6 113 193 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 130 128 3 131 3 0 2 110 189 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 7 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - A - - - ML 132 131 3 134 3 1 5 112 191 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 133 131 3 134 3 0 1 108 188 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 7 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - A - - - ML 135 134 3 137 3 1 5 110 190 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 136 134 3 137 3 0 1 107 186 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 6 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - A - - - ML 138 137 3 140 3 1 4 109 188 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 139 137 3 140 3 0 0 105 184 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 6 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - u - - - ML 141 140 3 143 3 1 4 107 186 -5.546 -0.063 -5.546 0.009 -0.010 -0.759 0.496 D 142 140 3 143 3 0 0 104 183 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 5 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - A - - - ML 144 143 3 146 3 1 4 106 185 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 145 143 3 146 3 0 0 103 181 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 5 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - G - - - ML 147 146 3 149 3 1 3 104 183 -2.586 -0.300 -5.546 -0.136 -1.551 1.210 -1.201 D 148 146 3 149 3 0 0 101 180 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 4 104 183 -5.139 -0.042 -12.782 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - a - - - ML 150 149 3 152 3 1 3 103 182 -5.546 -0.063 -5.546 0.838 -0.886 -0.880 0.173 D 151 149 3 152 3 0 0 100 178 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 4 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - A - - - ML 153 152 3 155 3 1 2 102 180 -2.659 -0.286 -5.546 1.689 -2.124 -1.864 -1.876 D 154 152 3 155 3 0 0 98 177 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 4 103 181 -0.985 -1.016 -13.673 0.000 0.000 0.000 0.000 [ MATL 52 ] 59 - U - - - ML 156 155 3 158 3 1 2 100 179 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 157 155 3 158 3 0 0 97 175 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 3 107 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 60 - G - - - ML 159 158 3 161 3 1 2 99 177 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 160 158 3 161 3 0 0 95 174 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 3 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 61 - A - - - ML 162 161 3 164 3 1 2 97 176 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 163 161 3 164 3 0 0 94 172 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 3 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 62 - U - - - ML 165 164 3 167 3 1 1 96 174 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 166 164 3 167 3 0 0 93 170 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 2 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 63 - U - - - ML 168 167 3 170 3 1 1 94 172 -5.546 -0.300 -2.586 -1.618 -1.299 -1.775 1.573 D 169 167 3 170 3 0 0 91 169 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 2 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - A - - - ML 171 170 3 173 3 1 1 93 171 -5.320 -0.074 -5.320 1.526 -1.605 -1.331 -1.343 D 172 170 3 173 3 0 0 90 167 -13.256 -3.291 -0.156 IL 173 173 3 173 3 1 2 100 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - U - - - ML 174 173 3 176 3 1 1 92 169 -5.320 -0.074 -5.320 -1.218 -0.966 -1.349 1.414 D 175 173 3 176 3 0 0 89 166 -13.256 -0.330 -2.291 IL 176 176 3 176 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 66 - A - - - ML 177 176 3 179 3 1 1 90 167 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 178 176 3 179 3 0 0 86 163 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 67 - A - - - ML 180 179 3 182 3 1 1 88 165 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 181 179 3 182 3 0 0 85 161 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 68 - c - - - ML 183 182 3 185 3 1 1 87 163 -5.546 -0.063 -5.546 0.005 0.347 -0.786 0.195 D 184 182 3 185 3 0 0 83 159 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 94 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 69 - G - - - ML 186 185 3 188 3 1 1 85 162 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 187 185 3 188 3 0 0 82 158 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 70 - A - - - ML 189 188 3 191 3 1 1 84 160 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 190 188 3 191 3 0 0 80 156 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 71 - U - - - ML 192 191 3 194 3 1 1 82 158 -5.546 -0.300 -2.586 -1.618 -1.299 -1.775 1.573 D 193 191 3 194 3 0 0 79 154 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 72 - U - - - ML 195 194 3 197 3 1 1 81 156 -5.320 -0.074 -5.320 -1.218 -0.966 -1.349 1.414 D 196 194 3 197 3 0 0 77 152 -13.256 -3.291 -0.156 IL 197 197 3 197 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 73 - U - - - ML 198 197 3 200 3 1 1 79 154 -5.320 -0.074 -5.320 -1.218 -0.966 -1.349 1.414 D 199 197 3 200 3 0 0 77 152 -13.256 -0.330 -2.291 IL 200 200 3 200 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 74 - U - - - ML 201 200 3 203 3 1 1 77 152 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 202 200 3 203 3 0 0 74 148 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 75 - C - - - ML 204 203 3 206 3 1 1 76 150 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 205 203 3 206 3 0 0 72 146 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 76 - c - - - ML 207 206 3 209 3 1 1 74 148 -5.546 -0.063 -5.546 0.023 0.916 -1.107 -0.660 D 208 206 3 209 3 0 0 70 144 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 77 - A - - - ML 210 209 3 212 3 1 1 72 146 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 211 209 3 212 3 0 0 68 142 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 78 - U - - - ML 213 212 3 215 3 1 1 70 144 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 214 212 3 215 3 0 0 66 139 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 79 - a - - - ML 216 215 3 218 3 1 1 69 142 -5.546 -0.063 -5.546 0.530 -0.835 -0.846 0.525 D 217 215 3 218 3 0 0 64 137 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 80 - u - - - ML 219 218 3 221 3 1 1 67 140 -5.546 -0.063 -5.546 0.003 -0.864 -0.947 0.948 D 220 218 3 221 3 0 0 62 135 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 81 - a - - - ML 222 221 3 224 3 1 1 65 137 -5.546 -0.063 -5.546 0.865 -0.895 -0.887 0.138 D 223 221 3 224 3 0 0 60 132 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 82 - u - - - ML 225 224 3 227 3 1 1 63 135 -5.546 -0.063 -5.546 0.420 -0.832 -0.853 0.629 D 226 224 3 227 3 0 0 58 129 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 83 - C - - - ML 228 227 3 230 3 1 1 61 132 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 229 227 3 230 3 0 0 56 126 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 84 - U - - - ML 231 230 3 233 3 1 1 58 129 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 232 230 3 233 3 0 0 53 123 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 85 - G - - - ML 234 233 3 236 3 1 1 56 126 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 235 233 3 236 3 0 0 49 119 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 86 - A - - - ML 237 236 3 239 3 1 1 53 123 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 238 236 3 239 3 0 0 45 114 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 87 - C - - - ML 240 239 3 242 3 1 1 49 118 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 241 239 3 242 3 0 0 32 101 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 88 - a - - - ML 243 242 3 245 2 1 1 1 1 * 0.000 0.367 -0.749 0.022 0.138 D 244 242 3 245 2 0 0 0 0 * 0.000 IL 245 245 3 245 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 82 ] - - - - - - E 246 245 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DdR10 ACC RF01560 DESC Dictyostelium snoRNA DdR10 LENG 81 MAXL 169 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 05:04:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01560/CM NSEQ 4 EFFN 2.472656 CKSUM 1793948137 STATS LOCAL MSV -8.5386 0.71857 STATS LOCAL VITERBI -10.0150 0.71857 STATS LOCAL FORWARD -2.9627 0.71857 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.05603 1.70820 1.74904 1.21392 1.38629 1.38629 1.38629 1.38629 0.02615 4.95941 3.97423 0.39730 1.11515 0.00000 * 1 1.93853 2.00136 1.36245 0.76593 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 2 1.35774 1.98160 2.03389 0.74637 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 3 0.77748 2.22792 1.21996 1.98455 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 4 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 5 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 6 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 7 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 8 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 9 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 10 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 11 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 12 0.78702 2.00638 2.00117 1.29045 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 13 1.38170 1.21561 1.33928 1.65923 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 14 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 15 1.00610 1.08764 2.04299 1.78554 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 16 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 17 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 18 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 19 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.20825 1.79221 3.84431 1.10250 0.40353 1.09861 0.40547 20 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 21 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.19814 1.84297 3.84431 0.03049 3.50541 1.09861 0.40547 22 0.80523 2.00055 1.99602 1.26629 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 23 1.35774 1.98160 2.03389 0.74637 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 24 0.80523 2.00055 1.99602 1.26629 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 25 1.35774 1.98160 2.03389 0.74637 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 26 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 27 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 28 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 29 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 30 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 31 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 32 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 33 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 34 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 35 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 36 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 37 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 38 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 39 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 40 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 41 0.77881 1.39592 2.04204 1.80984 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 42 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 43 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 44 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 45 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 46 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 47 1.38031 1.39339 1.91224 1.04265 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 48 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 49 1.48033 2.46119 0.54750 2.21906 - G - - : 1.38629 1.38629 1.38629 1.38629 0.20825 1.79221 3.84431 0.02880 3.56165 1.09861 0.40547 50 0.80523 2.00055 1.99602 1.26629 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 51 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.19814 1.84297 3.84431 0.70393 0.68248 1.09861 0.40547 52 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 53 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 54 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 55 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 56 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.20825 3.84431 1.79221 1.46634 0.26236 1.09861 0.40547 57 0.32875 2.49872 2.30853 2.31692 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05137 3.68744 3.68744 1.46634 0.26236 2.28077 0.10781 58 2.23041 2.05569 2.32102 0.40596 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05137 3.68744 3.68744 1.46634 0.26236 0.22867 1.58762 59 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 60 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 61 1.38311 1.14570 1.93090 1.25112 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 62 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 63 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 64 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.20825 3.84431 1.79221 1.46634 0.26236 1.09861 0.40547 65 2.23041 2.05569 2.32102 0.40596 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05137 3.68744 3.68744 1.46634 0.26236 2.28077 0.10781 66 2.23041 2.05569 2.32102 0.40596 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05137 3.68744 3.68744 1.46634 0.26236 0.22867 1.58762 67 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 68 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 69 1.37057 0.75126 2.15353 1.84394 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 70 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 71 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 72 1.01884 1.96492 1.97277 1.02235 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 73 1.38418 1.98533 2.04258 0.72890 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 74 0.78702 2.00638 2.00117 1.29045 - 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