INFERNAL1/a [1.1.4 | Dec 2020] NAME DdR1 ACC RF01559 DESC Dictyostelium snoRNA DdR1 STATES 202 NODES 68 CLEN 66 W 197 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:45 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.809570 CKSUM 2985257385 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 80.80 NC 43.40 EFP7GF -8.9635 0.71882 ECMLC 0.59303 -10.21136 0.21982 1600000 583095 0.002058 ECMGC 0.40181 -16.42295 -2.52399 1600000 106526 0.003755 ECMLI 0.49615 -9.66560 1.85290 1600000 364016 0.003297 ECMGI 0.44171 -8.56687 3.07604 1600000 68481 0.005841 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 197 353 -7.270 -7.477 -0.042 -5.891 IL 1 1 2 1 4 1 23 200 356 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 23 199 355 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 22 198 354 -5.647 -0.059 -5.647 0.363 -0.907 -0.948 0.734 D 4 2 3 5 3 0 18 195 351 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 24 202 358 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 21 197 353 -5.647 -0.059 -5.647 0.275 -1.465 0.973 -1.108 D 7 5 3 8 3 0 17 194 350 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 23 201 357 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 21 196 352 -5.647 -0.059 -5.647 0.646 -0.915 -0.934 0.466 D 10 8 3 11 3 0 16 193 349 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 22 200 356 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 20 195 350 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 13 11 3 14 3 0 15 192 348 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 22 199 355 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 19 193 349 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 16 14 3 17 3 0 15 190 346 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 21 198 354 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 19 192 348 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 19 17 3 20 3 0 14 189 345 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 20 197 353 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 18 191 347 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 22 20 3 23 3 0 13 188 344 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 19 196 352 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 17 190 346 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 25 23 3 26 3 0 12 187 343 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 19 194 350 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 16 189 345 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 28 26 3 29 3 0 12 186 342 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 18 193 349 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 16 188 344 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 31 29 3 32 3 0 11 185 341 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 17 192 348 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 15 187 343 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 34 32 3 35 3 0 10 184 340 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 17 191 347 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 14 186 342 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 37 35 3 38 3 0 10 183 339 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 16 190 346 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - c - - - ML 39 38 3 41 3 1 14 185 341 -5.647 -0.059 -5.647 0.376 0.689 -1.095 -0.684 D 40 38 3 41 3 0 9 182 338 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 15 189 345 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 13 184 339 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 43 41 3 44 3 0 8 181 337 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 15 188 344 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 12 182 338 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 46 44 3 47 3 0 7 179 335 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 14 187 343 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 11 181 337 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 49 47 3 50 3 0 7 178 334 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 13 186 342 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 51 50 3 53 3 1 11 180 336 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 52 50 3 53 3 0 6 177 333 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 12 185 340 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 10 179 335 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 55 53 3 56 3 0 5 176 332 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 12 183 339 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 10 178 334 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 58 56 3 59 3 0 5 175 331 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 11 182 338 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 9 177 333 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 61 59 3 62 3 0 4 174 330 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 10 181 337 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - C - - - ML 63 62 3 65 3 1 8 176 332 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 64 62 3 65 3 0 4 173 329 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 10 180 336 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 8 175 331 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 67 65 3 68 3 0 3 172 328 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 9 179 335 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 7 174 330 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 70 68 3 71 3 0 2 170 326 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 9 178 334 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 72 71 3 74 3 1 6 172 328 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 73 71 3 74 3 0 2 169 325 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 8 177 333 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - a - - - ML 75 74 3 77 3 1 6 171 327 -5.647 -0.059 -5.647 0.646 -0.915 -0.934 0.466 D 76 74 3 77 3 0 1 168 324 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 7 176 332 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - u - - - ML 78 77 3 80 3 1 5 170 326 -5.647 -0.059 -5.647 0.363 -0.907 -0.948 0.734 D 79 77 3 80 3 0 1 166 322 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 7 175 331 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 5 169 325 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 82 80 3 83 3 0 0 164 320 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 6 174 330 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 4 168 324 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 85 83 3 86 3 0 0 162 318 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 6 173 328 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 1 4 167 323 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 88 86 3 89 3 0 0 157 313 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 5 171 327 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 90 89 3 92 3 1 3 166 322 -1.971 -0.464 -5.647 1.743 -2.374 -2.113 -2.134 D 91 89 3 92 3 0 0 112 265 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 6 177 333 -0.170 -3.166 -16.697 0.000 0.000 0.000 0.000 [ MATL 31 ] 40 - A - - - ML 93 92 3 95 3 1 3 108 187 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 94 92 3 95 3 0 0 105 184 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 41 - C - - - ML 96 95 3 98 3 1 3 107 186 -1.971 -0.464 -5.647 -2.071 1.671 -2.278 -1.427 D 97 95 3 98 3 0 0 104 182 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 3 106 185 -5.912 -0.024 -13.556 0.000 0.000 0.000 0.000 [ MATL 33 ] 43 - A - - - ML 99 98 3 101 3 1 2 105 184 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 100 98 3 101 3 0 0 102 181 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 3 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 44 - g - - - ML 102 101 3 104 3 1 2 104 183 -5.647 -0.059 -5.647 0.275 -1.465 0.973 -1.108 D 103 101 3 104 3 0 0 101 179 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 45 - u - - - ML 105 104 3 107 3 1 1 103 181 -5.647 -0.059 -5.647 0.363 -0.907 -0.948 0.734 D 106 104 3 107 3 0 0 99 177 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 46 - C - - - ML 108 107 3 110 3 1 1 101 180 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 109 107 3 110 3 0 0 98 176 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 47 - A - - - ML 111 110 3 113 3 1 1 100 178 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 112 110 3 113 3 0 0 96 174 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 48 - g - - - ML 114 113 3 116 3 1 1 98 176 -5.647 -0.059 -5.647 0.629 -1.334 0.631 -0.977 D 115 113 3 116 3 0 0 95 172 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - U - - - ML 117 116 3 119 3 1 1 97 175 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 118 116 3 119 3 0 0 93 171 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - G - - - ML 120 119 3 122 3 1 1 95 173 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 121 119 3 122 3 0 0 92 169 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - u - - - ML 123 122 3 125 3 1 1 94 171 -5.647 -0.059 -5.647 0.363 -0.907 -0.948 0.734 D 124 122 3 125 3 0 0 90 167 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - u - - - ML 126 125 3 128 3 1 1 92 170 -5.647 -0.059 -5.647 -0.830 -0.971 0.396 0.688 D 127 125 3 128 3 0 0 89 166 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - G - - - ML 129 128 3 131 3 1 1 91 168 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 130 128 3 131 3 0 0 87 164 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - A - - - ML 132 131 3 134 3 1 1 89 166 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 133 131 3 134 3 0 0 86 162 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - c - - - ML 135 134 3 137 3 1 1 88 164 -5.647 -0.059 -5.647 0.376 0.689 -1.095 -0.684 D 136 134 3 137 3 0 0 84 160 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - c - - - ML 138 137 3 140 3 1 1 86 163 -5.647 -0.059 -5.647 -1.213 0.791 -1.393 0.543 D 139 137 3 140 3 0 0 83 159 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - A - - - ML 141 140 3 143 3 1 1 85 161 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 142 140 3 143 3 0 0 81 157 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - A - - - ML 144 143 3 146 3 1 1 83 159 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 145 143 3 146 3 0 0 80 155 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - A - - - ML 147 146 3 149 3 1 1 82 157 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 148 146 3 149 3 0 0 78 153 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - a - - - ML 150 149 3 152 3 1 1 80 155 -5.647 -0.059 -5.647 0.646 -0.915 -0.934 0.466 D 151 149 3 152 3 0 0 76 151 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 61 - C - - - ML 153 152 3 155 3 1 1 78 153 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 154 152 3 155 3 0 0 75 149 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 62 - U - - - ML 156 155 3 158 3 1 1 77 151 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 157 155 3 158 3 0 0 73 147 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - A - - - ML 159 158 3 161 3 1 1 75 149 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 160 158 3 161 3 0 0 71 145 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 83 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 64 - A - - - ML 162 161 3 164 3 1 1 73 147 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 163 161 3 164 3 0 0 70 143 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - G - - - ML 165 164 3 167 3 1 1 72 145 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 166 164 3 167 3 0 0 68 141 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - A - - - ML 168 167 3 170 3 1 1 70 143 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 169 167 3 170 3 0 0 66 139 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - A - - - ML 171 170 3 173 3 1 1 68 141 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 172 170 3 173 3 0 0 64 136 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 68 - G - - - ML 174 173 3 176 3 1 1 66 139 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 175 173 3 176 3 0 0 62 134 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 69 - U - - - ML 177 176 3 179 3 1 1 64 137 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 178 176 3 179 3 0 0 60 132 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 70 - U - - - ML 180 179 3 182 3 1 1 62 134 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 181 179 3 182 3 0 0 58 129 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - C - - - ML 183 182 3 185 3 1 1 60 132 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 184 182 3 185 3 0 0 55 126 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - U - - - ML 186 185 3 188 3 1 1 58 129 -5.647 -0.059 -5.647 -1.812 -1.460 -1.978 1.631 D 187 185 3 188 3 0 0 52 123 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - G - - - ML 189 188 3 191 3 1 1 55 126 -5.647 -0.059 -5.647 -1.847 -2.644 1.752 -2.362 D 190 188 3 191 3 0 0 49 119 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - A - - - ML 192 191 3 194 3 1 1 52 122 -5.647 -0.059 -5.647 1.743 -2.374 -2.113 -2.134 D 193 191 3 194 3 0 0 45 114 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - C - - - ML 195 194 3 197 3 1 1 48 118 -5.647 -0.059 -5.647 -2.071 1.671 -2.278 -1.427 D 196 194 3 197 3 0 0 32 101 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - u - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 0.363 -0.907 -0.948 0.734 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME DdR1 ACC RF01559 DESC Dictyostelium snoRNA DdR1 LENG 66 MAXL 197 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 19:27:45 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 3 EFFN 2.809570 STATS LOCAL MSV -8.3916 0.71882 STATS LOCAL VITERBI -9.0087 0.71882 STATS LOCAL FORWARD -3.1562 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.98644 1.64500 1.53717 1.51824 1.38629 1.38629 1.38629 1.38629 0.02412 5.03905 4.05388 0.39730 1.11515 0.00000 * 1 1.13496 2.01524 2.04352 0.87777 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 2 1.19542 2.40144 0.71160 2.15434 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 3 0.93849 2.02059 2.03349 1.06326 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 4 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 5 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 6 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 7 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 8 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 9 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 10 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 11 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 12 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 13 1.12579 0.90890 2.14559 1.86020 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 14 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 15 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 16 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 17 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 18 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 19 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 20 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 21 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 22 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 23 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 24 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 25 0.93849 2.02059 2.03349 1.06326 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 26 1.13496 2.01524 2.04352 0.87778 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 27 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 28 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 29 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 30 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.32167 1.36610 3.91394 2.19459 0.11811 1.09861 0.40547 31 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 32 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.32167 1.36610 3.91394 0.01675 4.09762 1.09861 0.40547 33 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 34 1.19542 2.40144 0.71160 2.15434 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 35 1.13496 2.01524 2.04352 0.87778 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 36 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 37 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 38 0.95035 2.31090 0.94883 2.06336 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 39 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 40 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 41 1.13496 2.01524 2.04352 0.87777 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 42 1.96129 2.05917 1.11157 0.90951 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 43 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 44 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 45 1.12579 0.90890 2.14559 1.86020 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 46 2.22726 0.83776 2.35195 1.00973 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 47 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 48 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 49 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 50 0.93849 2.02059 2.03349 1.06326 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 51 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 52 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 53 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 54 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 55 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 56 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 57 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 58 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 59 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 60 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 61 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 62 2.64214 2.39813 2.75742 0.25560 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 63 2.66675 3.21901 0.17208 3.02383 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 64 0.17791 3.03185 2.85082 2.86546 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 65 2.82207 0.22812 2.96554 2.37563 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04074 3.91394 3.91394 1.46634 0.26236 1.09861 0.40547 66 1.13496 2.01524 2.04352 0.87777 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //