INFERNAL1/a [1.1.5 | Sep 2023] NAME DdR1 ACC RF01559 DESC Dictyostelium snoRNA DdR1 STATES 202 NODES 68 CLEN 66 W 196 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 20:09:56 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01559/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.797852 CKSUM 2985257385 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 78.90 NC 61.10 EFP7GF -8.9630 0.71881 ECMLC 0.61246 -9.85048 0.24685 1600000 582009 0.002062 ECMGC 0.40418 -16.41137 -2.57117 1600000 107512 0.003721 ECMLI 0.50389 -9.50093 1.85197 1600000 366108 0.003278 ECMGI 0.44259 -8.58709 3.04279 1600000 68781 0.005816 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 196 352 -7.266 -7.473 -0.042 -5.887 IL 1 1 2 1 4 1 23 199 354 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 23 198 354 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 22 197 353 -5.643 -0.059 -5.643 0.267 -0.910 -0.962 0.808 D 4 2 3 5 3 0 18 194 350 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 24 201 357 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 21 196 352 -5.643 -0.059 -5.643 0.160 -1.517 1.061 -1.162 D 7 5 3 8 3 0 17 193 349 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 23 200 356 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 21 195 350 -5.643 -0.059 -5.643 0.724 -0.923 -0.938 0.377 D 10 8 3 11 3 0 16 192 348 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 22 199 355 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 20 194 349 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 13 11 3 14 3 0 15 191 346 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 22 198 354 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 19 192 348 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 16 14 3 17 3 0 15 189 345 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 21 197 353 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 18 191 347 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 19 17 3 20 3 0 14 188 344 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 20 196 352 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 18 190 346 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 22 20 3 23 3 0 13 187 343 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 19 195 350 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 17 189 345 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 25 23 3 26 3 0 12 186 342 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 19 193 349 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 16 188 344 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 28 26 3 29 3 0 12 185 341 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 18 192 348 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 16 187 343 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 31 29 3 32 3 0 11 184 340 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 17 191 347 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 15 186 342 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 34 32 3 35 3 0 10 183 339 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 17 190 346 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 14 185 341 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 37 35 3 38 3 0 10 182 338 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 16 189 345 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - c - - - ML 39 38 3 41 3 1 14 184 339 -5.643 -0.059 -5.643 0.273 0.779 -1.123 -0.698 D 40 38 3 41 3 0 9 181 337 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 15 188 344 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 13 182 338 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 43 41 3 44 3 0 8 180 335 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 14 187 343 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 12 181 337 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 46 44 3 47 3 0 7 178 334 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 14 186 342 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 11 180 336 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 49 47 3 50 3 0 7 177 333 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 13 185 341 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 51 50 3 53 3 1 11 179 335 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 52 50 3 53 3 0 6 176 332 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 12 184 339 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 10 178 334 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 55 53 3 56 3 0 5 175 331 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 12 182 338 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 10 177 333 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 58 56 3 59 3 0 5 174 330 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 11 181 337 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 9 176 332 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 61 59 3 62 3 0 4 173 329 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 10 180 336 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - C - - - ML 63 62 3 65 3 1 8 175 331 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 64 62 3 65 3 0 4 172 328 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 10 179 335 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 8 174 330 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 67 65 3 68 3 0 3 171 327 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 9 178 334 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 7 173 328 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 70 68 3 71 3 0 2 169 325 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 9 177 333 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - G - - - ML 72 71 3 74 3 1 6 171 327 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 73 71 3 74 3 0 2 168 324 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 8 176 332 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - a - - - ML 75 74 3 77 3 1 6 170 326 -5.643 -0.059 -5.643 0.724 -0.923 -0.938 0.377 D 76 74 3 77 3 0 1 167 323 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 7 175 331 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - u - - - ML 78 77 3 80 3 1 5 169 325 -5.643 -0.059 -5.643 0.267 -0.910 -0.962 0.808 D 79 77 3 80 3 0 1 165 321 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 7 174 330 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 5 168 324 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 82 80 3 83 3 0 0 163 319 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 6 173 328 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 4 167 323 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 85 83 3 86 3 0 0 161 317 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 6 171 327 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 1 4 166 322 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 88 86 3 89 3 0 0 156 312 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 5 170 326 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 90 89 3 92 3 1 3 165 321 -2.134 -0.411 -5.643 1.742 -2.365 -2.104 -2.125 D 91 89 3 92 3 0 0 112 265 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 6 177 333 -0.170 -3.166 -16.516 0.000 0.000 0.000 0.000 [ MATL 31 ] 40 - A - - - ML 93 92 3 95 3 1 3 108 187 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 94 92 3 95 3 0 0 105 184 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 41 - C - - - ML 96 95 3 98 3 1 3 107 186 -2.134 -0.411 -5.643 -2.064 1.669 -2.271 -1.421 D 97 95 3 98 3 0 0 104 182 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 3 107 186 -5.734 -0.027 -13.378 0.000 0.000 0.000 0.000 [ MATL 33 ] 43 - A - - - ML 99 98 3 101 3 1 2 105 184 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 100 98 3 101 3 0 0 102 181 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 3 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 44 - G - - - ML 102 101 3 104 3 1 2 104 183 -5.643 -0.059 -5.643 0.160 -1.517 1.061 -1.162 D 103 101 3 104 3 0 0 101 179 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 45 - u - - - ML 105 104 3 107 3 1 1 103 181 -5.643 -0.059 -5.643 0.267 -0.910 -0.962 0.808 D 106 104 3 107 3 0 0 99 178 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 46 - C - - - ML 108 107 3 110 3 1 1 101 180 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 109 107 3 110 3 0 0 98 176 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 47 - A - - - ML 111 110 3 113 3 1 1 100 178 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 112 110 3 113 3 0 0 96 174 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 48 - a - - - ML 114 113 3 116 3 1 1 98 176 -5.643 -0.059 -5.643 0.727 -1.312 0.512 -0.956 D 115 113 3 116 3 0 0 95 173 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - U - - - ML 117 116 3 119 3 1 1 97 175 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 118 116 3 119 3 0 0 93 171 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - G - - - ML 120 119 3 122 3 1 1 95 173 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 121 119 3 122 3 0 0 92 169 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - u - - - ML 123 122 3 125 3 1 1 94 171 -5.643 -0.059 -5.643 0.267 -0.910 -0.962 0.808 D 124 122 3 125 3 0 0 90 167 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - u - - - ML 126 125 3 128 3 1 1 92 170 -5.643 -0.059 -5.643 -0.834 -0.959 0.285 0.771 D 127 125 3 128 3 0 0 89 166 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - G - - - ML 129 128 3 131 3 1 1 91 168 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 130 128 3 131 3 0 0 87 164 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - A - - - ML 132 131 3 134 3 1 1 89 166 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 133 131 3 134 3 0 0 86 162 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - c - - - ML 135 134 3 137 3 1 1 88 164 -5.643 -0.059 -5.643 0.273 0.779 -1.123 -0.698 D 136 134 3 137 3 0 0 84 160 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - c - - - ML 138 137 3 140 3 1 1 86 163 -5.643 -0.059 -5.643 -1.237 0.881 -1.419 0.444 D 139 137 3 140 3 0 0 83 159 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - A - - - ML 141 140 3 143 3 1 1 85 161 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 142 140 3 143 3 0 0 81 157 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - A - - - ML 144 143 3 146 3 1 1 83 159 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 145 143 3 146 3 0 0 80 155 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - A - - - ML 147 146 3 149 3 1 1 82 157 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 148 146 3 149 3 0 0 78 153 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - a - - - ML 150 149 3 152 3 1 1 80 155 -5.643 -0.059 -5.643 0.724 -0.923 -0.938 0.377 D 151 149 3 152 3 0 0 76 151 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 61 - C - - - ML 153 152 3 155 3 1 1 78 153 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 154 152 3 155 3 0 0 75 149 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 62 - U - - - ML 156 155 3 158 3 1 1 77 151 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 157 155 3 158 3 0 0 73 147 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - A - - - ML 159 158 3 161 3 1 1 75 149 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 160 158 3 161 3 0 0 71 145 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 83 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 64 - A - - - ML 162 161 3 164 3 1 1 73 147 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 163 161 3 164 3 0 0 70 143 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - G - - - ML 165 164 3 167 3 1 1 72 145 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 166 164 3 167 3 0 0 68 141 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - A - - - ML 168 167 3 170 3 1 1 70 143 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 169 167 3 170 3 0 0 66 139 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - A - - - ML 171 170 3 173 3 1 1 68 141 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 172 170 3 173 3 0 0 64 136 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 68 - G - - - ML 174 173 3 176 3 1 1 66 139 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 175 173 3 176 3 0 0 62 134 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 69 - U - - - ML 177 176 3 179 3 1 1 64 137 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 178 176 3 179 3 0 0 60 132 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 70 - U - - - ML 180 179 3 182 3 1 1 62 134 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 181 179 3 182 3 0 0 58 129 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - C - - - ML 183 182 3 185 3 1 1 60 132 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 184 182 3 185 3 0 0 55 126 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - U - - - ML 186 185 3 188 3 1 1 58 129 -5.643 -0.059 -5.643 -1.805 -1.454 -1.971 1.629 D 187 185 3 188 3 0 0 52 123 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - G - - - ML 189 188 3 191 3 1 1 55 126 -5.643 -0.059 -5.643 -1.842 -2.637 1.751 -2.355 D 190 188 3 191 3 0 0 49 119 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - A - - - ML 192 191 3 194 3 1 1 52 122 -5.643 -0.059 -5.643 1.742 -2.365 -2.104 -2.125 D 193 191 3 194 3 0 0 45 114 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - C - - - ML 195 194 3 197 3 1 1 48 118 -5.643 -0.059 -5.643 -2.064 1.669 -2.271 -1.421 D 196 194 3 197 3 0 0 32 101 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - u - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 0.267 -0.910 -0.962 0.808 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DdR1 ACC RF01559 DESC Dictyostelium snoRNA DdR1 LENG 66 MAXL 196 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sun Jul 7 20:09:56 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01559/CM NSEQ 3 EFFN 2.797852 CKSUM 2985257385 STATS LOCAL MSV -8.4174 0.71881 STATS LOCAL VITERBI -9.0196 0.71881 STATS LOCAL FORWARD -3.1633 0.71881 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.98954 1.64084 1.53775 1.51607 1.38629 1.38629 1.38629 1.38629 0.02419 5.03639 4.05121 0.39730 1.11515 0.00000 * 1 1.20113 2.01739 2.05310 0.82598 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 2 1.27569 2.43803 0.65064 2.19181 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 3 0.88425 2.02633 2.03648 1.12495 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 4 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 5 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 6 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 7 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 8 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 9 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 10 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 11 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 12 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 13 1.19697 0.84613 2.16486 1.87044 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 14 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 15 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 16 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 17 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 18 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 19 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 20 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 21 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 22 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 23 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 24 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 25 0.88425 2.02633 2.03648 1.12495 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 26 1.20113 2.01739 2.05310 0.82598 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 27 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 28 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 29 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 30 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.28479 1.47921 3.91159 2.19424 0.11816 1.09861 0.40547 31 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 32 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.28479 1.47921 3.91159 0.01897 3.97462 1.09861 0.40547 33 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 34 1.27569 2.43803 0.65064 2.19181 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 35 1.20113 2.01739 2.05310 0.82598 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 36 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 37 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 38 0.88217 2.29581 1.03123 2.04895 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 39 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 40 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 41 1.20113 2.01739 2.05310 0.82598 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 42 1.96426 2.05130 1.18906 0.85176 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 43 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 44 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 45 1.19697 0.84613 2.16486 1.87044 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 46 2.24386 0.77562 2.36962 1.07876 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 47 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 48 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 49 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 50 0.88425 2.02633 2.03648 1.12495 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 51 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 52 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 53 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 54 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 55 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 56 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 57 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 58 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 59 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 60 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 61 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 62 2.63752 2.39431 2.75260 0.25688 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 63 2.66310 3.21385 0.17293 3.01860 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 64 0.17907 3.02591 2.84498 2.85933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 65 2.81719 0.22931 2.96038 2.37149 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04084 3.91159 3.91159 1.46634 0.26236 1.09861 0.40547 66 1.20113 2.01739 2.05310 0.82598 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //