INFERNAL1/a [1.1.4 | Dec 2020] NAME TB9Cs3H2 ACC RF01556 DESC Trypanosomatid snoRNA TB9Cs3H2 STATES 193 NODES 51 CLEN 63 W 79 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.282227 CKSUM 3589756571 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 51.10 NC 35.20 EFP7GF -7.4897 0.72305 ECMLC 0.65425 -6.06915 2.88069 1600000 418943 0.002864 ECMGC 0.40954 -17.59303 -3.78864 1600000 114109 0.003505 ECMLI 0.64684 -4.61645 4.00948 1600000 317962 0.003774 ECMGI 0.45158 -12.80791 -0.87713 1600000 87483 0.004572 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 99 -7.086 -7.293 -0.048 -5.707 IL 1 1 2 1 4 1 17 83 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 79 99 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 4 2 3 5 3 0 12 78 97 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 15 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 64 - A - - MR 6 5 3 8 3 1 16 78 98 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 7 5 3 8 3 0 10 76 96 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 63 - G - - MR 9 8 3 11 3 1 16 77 97 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 10 8 3 11 3 0 9 75 95 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 62 - A - - MR 12 11 3 14 3 1 15 76 96 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 13 11 3 14 3 0 8 74 94 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 61 - g - - MR 15 14 3 17 5 1 15 75 95 -7.206 -0.036 -7.021 -7.234 -8.125 0.330 -1.643 0.958 -1.056 D 16 14 3 17 5 0 8 74 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 12 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 60 G C - - MP 18 17 3 22 6 2 16 74 94 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 19 17 3 22 6 1 10 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 9 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 5 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 11 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 11 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 59 U A - - MP 24 23 6 28 6 2 15 72 92 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.498 -4.330 -4.302 -0.604 -3.180 -4.837 1.154 -3.897 -4.304 -0.392 -4.662 -2.219 3.457 -4.637 -0.849 -3.095 ML 25 23 6 28 6 1 9 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 9 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 5 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 10 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 11 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 58 G C - - MP 30 29 6 34 6 2 14 70 90 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 31 29 6 34 6 1 9 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 8 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 5 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 10 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 10 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 57 C G - - MP 36 35 6 40 6 2 12 68 88 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.833 -4.763 -4.474 -0.971 -3.132 -4.848 3.630 -3.971 -4.534 -0.768 -4.763 -2.715 0.352 -4.883 -0.847 -3.364 ML 37 35 6 40 6 1 8 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 4 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 9 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 56 C G - - MP 42 41 6 46 4 2 10 66 86 -7.086 -7.293 -0.048 -5.707 -4.833 -4.763 -4.474 -0.971 -3.132 -4.848 3.630 -3.971 -4.534 -0.768 -4.763 -2.715 0.352 -4.883 -0.847 -3.364 ML 43 41 6 46 4 1 7 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 5 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 4 65 85 -4.568 -4.250 -2.265 -0.520 IL 46 46 5 46 4 1 9 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 8 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 7 - c - - - ML 48 47 6 50 3 1 9 64 83 -8.093 -0.019 -6.747 -0.502 0.658 -0.082 -0.374 D 49 47 6 50 3 0 4 62 82 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 8 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 8 - U - - - ML 51 50 3 53 3 1 9 63 82 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 52 50 3 53 3 0 3 61 81 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 7 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - C - - - ML 54 53 3 56 3 1 8 62 81 -8.093 -0.019 -6.747 -2.056 1.699 -2.887 -1.407 D 55 53 3 56 3 0 3 60 80 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 7 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - A - - - ML 57 56 3 59 3 1 7 60 80 -8.093 -0.019 -6.747 1.769 -2.632 -2.238 -2.201 D 58 56 3 59 3 0 2 59 79 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 6 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - G - - - ML 60 59 3 62 3 1 7 59 79 -8.093 -0.019 -6.747 -1.853 -3.114 1.779 -2.501 D 61 59 3 62 3 0 2 58 78 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 5 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - G - - - ML 63 62 3 65 3 1 6 58 78 -8.093 -0.019 -6.747 -1.853 -3.114 1.779 -2.501 D 64 62 3 65 3 0 1 57 76 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - U - - - ML 66 65 3 68 3 1 6 57 76 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 67 65 3 68 3 0 1 56 75 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - A - - - ML 69 68 3 71 3 1 5 56 75 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 70 68 3 71 3 0 0 55 74 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 4 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 55 - a - - MR 72 71 3 74 3 1 4 55 74 -8.475 -0.017 -6.793 0.948 -0.102 -1.194 -0.511 D 73 71 3 74 3 0 0 54 73 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 3 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 54 - G - - MR 75 74 3 77 3 1 4 54 73 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 76 74 3 77 3 0 0 53 72 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 53 - A - - MR 78 77 3 80 3 1 4 53 72 -8.475 -0.017 -6.793 1.022 -1.511 0.137 -0.946 D 79 77 3 80 3 0 0 52 71 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 52 - A - - MR 81 80 3 83 3 1 3 52 71 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 82 80 3 83 3 0 0 51 70 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 51 - C - - MR 84 83 3 86 3 1 3 51 70 -8.475 -0.017 -6.793 -2.056 1.699 -2.887 -1.407 D 85 83 3 86 3 0 0 50 69 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 50 - U - - MR 87 86 3 89 3 1 2 50 69 -8.475 -0.017 -6.793 -1.727 -1.681 -2.472 1.681 D 88 86 3 89 3 0 0 49 68 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 49 - U - - MR 90 89 3 92 3 1 2 49 68 -8.475 -0.017 -6.793 -1.727 -1.681 -2.472 1.681 D 91 89 3 92 3 0 0 48 67 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 48 - G - - MR 93 92 3 95 5 1 1 48 67 -7.206 -0.036 -7.021 -7.234 -8.125 -1.853 -3.114 1.779 -2.501 D 94 92 3 95 5 0 0 47 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 15 47 a g - - MP 96 95 3 100 6 2 2 47 66 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -2.958 -2.992 2.020 0.300 -2.404 -3.679 1.572 -2.973 -3.042 0.464 -3.504 -1.277 0.967 -3.204 1.480 -2.082 ML 97 95 3 100 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 46 u a - - MP 102 101 6 106 6 2 2 45 64 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.155 -2.886 -3.208 1.698 -2.692 -4.027 1.580 -3.164 -3.205 1.073 -3.703 -0.772 2.361 -3.411 -0.411 -2.147 ML 103 101 6 106 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 45 G C - - MP 108 107 6 112 6 2 2 43 62 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 109 107 6 112 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 18 44 u a - - MP 114 113 6 118 6 2 2 41 60 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.593 -3.577 -3.515 0.071 -2.555 -4.121 1.741 -3.240 -3.534 0.273 -3.946 -1.641 2.678 -3.764 1.423 -2.441 ML 115 113 6 118 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 19 43 G C - - MP 120 119 6 124 6 2 2 39 58 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 121 119 6 124 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 20 42 g c - - MP 126 125 6 130 6 2 2 37 56 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.185 0.834 -3.339 1.085 -3.835 -3.958 0.327 -3.632 -3.242 2.589 -3.609 1.333 0.061 -3.382 -1.514 -2.275 ML 127 125 6 130 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 41 u a - - MP 132 131 6 136 6 2 2 35 54 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.786 -3.725 -3.657 0.031 -2.581 -4.226 2.479 -3.296 -3.666 0.263 -4.054 -1.698 2.615 -3.924 -0.253 -2.533 ML 133 131 6 136 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 40 G C - - MP 138 137 6 142 4 2 2 33 52 -7.086 -7.293 -0.048 -5.707 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 139 137 6 142 4 1 1 34 53 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 33 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 32 52 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 35 54 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 23 - a - - - ML 144 143 6 146 3 1 1 31 50 -8.093 -0.019 -6.747 0.358 -0.885 -0.045 0.271 D 145 143 6 146 3 0 0 29 49 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 24 - U - - - ML 147 146 3 149 3 1 1 29 48 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 148 146 3 149 3 0 0 28 47 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 25 - u - - - ML 150 149 3 152 3 1 1 28 47 -8.093 -0.019 -6.747 -0.480 -0.955 -0.077 0.864 D 151 149 3 152 3 0 0 27 46 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 26 - G - - - ML 153 152 3 155 3 1 1 27 46 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 154 152 3 155 3 0 0 26 45 -5.620 -0.734 -1.403 IL 155 155 3 155 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 39 - g - - MR 156 155 3 158 3 1 1 26 45 -8.475 -0.017 -6.793 -0.473 -0.258 0.828 -0.583 D 157 155 3 158 3 0 0 25 43 -6.390 -1.568 -0.620 IR 158 158 3 158 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 38 - a - - MR 159 158 3 161 3 1 1 25 44 -8.475 -0.017 -6.793 0.345 -0.134 -0.001 -0.288 D 160 158 3 161 3 0 0 24 42 -6.390 -1.568 -0.620 IR 161 161 3 161 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 37 - C - - MR 162 161 3 164 3 1 1 24 43 -8.475 -0.017 -6.793 -2.056 1.699 -2.887 -1.407 D 163 161 3 164 3 0 0 23 42 -6.390 -1.568 -0.620 IR 164 164 3 164 3 1 1 25 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 36 - U - - MR 165 164 3 167 5 1 1 23 42 -7.206 -0.036 -7.021 -7.234 -8.125 -1.727 -1.681 -2.472 1.681 D 166 164 3 167 5 0 0 22 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 167 167 3 167 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 27 35 u a - - MP 168 167 3 172 4 2 2 22 41 -7.086 -7.293 -0.048 -5.707 -3.791 -3.731 -3.660 0.023 -2.583 -4.226 2.426 -3.298 -3.670 0.256 -4.057 -1.705 2.666 -3.928 -0.255 -2.537 ML 169 167 3 172 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 3 172 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 3 172 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 25 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 28 - g - - - ML 174 173 6 176 3 1 1 19 38 -8.093 -0.316 -2.374 -0.531 -1.221 0.851 0.104 D 175 173 6 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 29 - u - - - ML 177 176 3 179 3 1 1 18 36 -2.056 -0.419 -6.454 0.481 -0.764 -0.975 0.591 D 178 176 3 179 3 0 0 16 35 -7.688 -0.399 -2.080 IL 179 179 3 179 3 1 1 18 36 -2.016 -0.484 -4.716 0.000 0.000 0.000 0.000 [ MATL 46 ] 31 - u - - - ML 180 179 3 182 3 1 1 16 35 -8.093 -0.019 -6.747 -0.492 -0.955 -0.131 0.896 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - C - - - ML 183 182 3 185 3 1 1 15 33 -8.093 -0.019 -6.747 -2.056 1.699 -2.887 -1.407 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - c - - - ML 186 185 3 188 3 1 1 13 31 -8.093 -0.019 -6.747 -0.894 0.880 -1.709 0.396 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - c - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.894 0.880 -1.709 0.396 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB9Cs3H2 ACC RF01556 DESC Trypanosomatid snoRNA TB9Cs3H2 LENG 63 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 3 EFFN 2.446289 CKSUM 3589756571 STATS LOCAL MSV -8.4016 0.72305 STATS LOCAL VITERBI -9.0080 0.72305 STATS LOCAL FORWARD -3.3874 0.72305 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.48792 1.39687 1.21562 1.46854 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.14674 3.28952 3.00869 2.99858 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.61669 3.28998 0.16242 3.22847 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.02681 1.94518 2.78290 0.29208 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.61797 3.29152 0.16214 3.23061 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.24749 0.22818 3.02827 2.14771 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.24649 0.22829 3.02778 2.14753 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 1.76362 0.90908 1.43690 1.67122 7 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.65714 2.61309 3.17642 0.20480 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.90728 0.18952 3.48358 2.43815 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.14674 3.28952 3.00869 2.99858 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.75183 3.63668 0.13975 3.21205 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.75183 3.63668 0.13975 3.21205 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.65714 2.61309 3.17642 0.20480 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.14674 3.28952 3.00869 2.99858 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 1.02140 1.58851 2.15297 1.14087 15 a - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 1.47417 1.59396 1.74627 0.93270 16 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.61764 3.29113 0.16222 3.23006 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.52159 1.49749 2.29289 0.51919 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.61701 3.29037 0.16235 3.22901 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 1.34365 2.42426 0.60170 2.27609 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.55769 1.00059 2.30714 0.78678 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.61577 3.28887 0.16262 3.22693 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 1.13630 2.01439 1.41223 1.19735 23 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.65714 2.61309 3.17642 0.20480 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 1.74227 2.07190 1.43504 0.77473 25 u - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.75183 3.63668 0.13975 3.21205 26 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.56364 1.03700 2.31291 0.75612 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 1.78126 2.26207 0.77655 1.31882 28 g - - _ 1.38629 1.38629 1.38629 1.38629 0.26249 3.95124 1.55288 1.46634 0.26236 1.09861 0.40547 29 1.04900 1.93001 2.07869 0.96898 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.35334 1.29518 3.73755 0.16566 1.87948 0.16698 1.87220 30 1.75116 2.07210 1.47358 0.75204 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.90728 0.18952 3.48358 2.43815 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.04329 0.75748 2.61307 1.11400 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.04329 0.75748 2.61307 1.11400 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.85637 2.48207 0.92967 2.33258 35 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.65714 2.61309 3.17642 0.20480 36 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.90728 0.18952 3.48358 2.43815 37 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 1.14708 1.47362 1.37931 1.60152 38 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 1.74361 1.56322 0.78906 1.82399 39 g - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 3.42537 0.19275 3.12441 2.31453 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.89115 2.47340 0.89771 2.32264 41 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.50641 0.69103 2.23098 1.17132 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.43050 0.19231 3.12670 2.31551 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.84639 2.45917 0.95522 2.29453 44 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.43670 0.19178 3.12946 2.31668 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 1.04428 1.93090 1.42568 1.33677 46 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 1.93975 2.32458 0.44463 2.14240 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 2.75183 3.63668 0.13975 3.21205 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 2.65714 2.61309 3.17642 0.20480 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.65714 2.61309 3.17642 0.20480 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 2.90728 0.18952 3.48358 2.43815 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 0.14674 3.28952 3.00869 2.99858 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 0.66585 2.47104 1.28384 2.08187 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.75183 3.63668 0.13975 3.21205 54 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 0.71576 1.45139 2.24244 1.76763 55 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 2.42575 3.19574 0.19699 3.00668 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.42657 3.19688 0.19677 3.00804 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 3.43727 0.19173 3.12971 2.31679 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 0.33073 2.97124 1.78240 2.77861 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 3.44871 0.19077 3.13477 2.31894 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 1.15825 2.56523 0.70565 2.16046 61 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 61 0.14674 3.28952 3.00869 2.99858 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 62 2.75183 3.63668 0.13975 3.21205 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 63 0.14674 3.28952 3.00869 2.99858 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //