INFERNAL1/a [1.1.5 | Sep 2023] NAME TB9Cs3H2 ACC RF01556 DESC Trypanosomatid snoRNA TB9Cs3H2 STATES 193 NODES 51 CLEN 63 W 79 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 01:06:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01556/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.282227 CKSUM 3589756571 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 68.50 NC 44.50 EFP7GF -7.4957 0.72304 ECMLC 0.65594 -6.03792 2.88759 1600000 418608 0.002867 ECMGC 0.41170 -17.50311 -3.77539 1600000 113913 0.003511 ECMLI 0.64602 -4.62795 4.00795 1600000 317769 0.003776 ECMGI 0.45238 -12.77668 -0.86713 1600000 87477 0.004573 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 99 -7.086 -7.293 -0.048 -5.707 IL 1 1 2 1 4 1 17 83 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 79 99 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 4 2 3 5 3 0 12 78 97 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 15 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 64 - A - - MR 6 5 3 8 3 1 16 78 98 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 7 5 3 8 3 0 10 76 96 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 63 - G - - MR 9 8 3 11 3 1 16 77 97 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 10 8 3 11 3 0 9 75 95 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 62 - A - - MR 12 11 3 14 3 1 15 76 96 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 13 11 3 14 3 0 8 74 94 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 61 - g - - MR 15 14 3 17 5 1 15 75 95 -7.206 -0.036 -7.021 -7.234 -8.125 0.339 -1.639 0.950 -1.052 D 16 14 3 17 5 0 8 74 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 12 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 60 G C - - MP 18 17 3 22 6 2 16 74 94 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 19 17 3 22 6 1 10 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 9 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 5 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 11 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 11 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 59 U A - - MP 24 23 6 28 6 2 15 72 92 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.498 -4.330 -4.302 -0.604 -3.180 -4.837 1.154 -3.897 -4.304 -0.392 -4.662 -2.219 3.457 -4.637 -0.849 -3.095 ML 25 23 6 28 6 1 9 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 9 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 5 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 10 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 11 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 58 G C - - MP 30 29 6 34 6 2 14 70 90 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 31 29 6 34 6 1 9 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 8 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 5 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 10 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 10 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 57 C G - - MP 36 35 6 40 6 2 12 68 88 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.833 -4.763 -4.474 -0.971 -3.132 -4.848 3.630 -3.971 -4.534 -0.768 -4.763 -2.715 0.352 -4.883 -0.847 -3.364 ML 37 35 6 40 6 1 8 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 4 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 9 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 9 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 56 C G - - MP 42 41 6 46 4 2 10 66 86 -7.086 -7.293 -0.048 -5.707 -4.833 -4.763 -4.474 -0.971 -3.132 -4.848 3.630 -3.971 -4.534 -0.768 -4.763 -2.715 0.352 -4.883 -0.847 -3.364 ML 43 41 6 46 4 1 7 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 5 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 4 65 85 -4.568 -4.250 -2.265 -0.520 IL 46 46 5 46 4 1 9 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 8 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 7 - c - - - ML 48 47 6 50 3 1 9 64 83 -8.093 -0.019 -6.747 -0.509 0.676 -0.106 -0.376 D 49 47 6 50 3 0 4 62 82 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 8 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 8 - U - - - ML 51 50 3 53 3 1 9 63 82 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 52 50 3 53 3 0 3 61 81 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 7 65 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - C - - - ML 54 53 3 56 3 1 8 62 81 -8.093 -0.019 -6.747 -2.056 1.699 -2.887 -1.407 D 55 53 3 56 3 0 3 60 80 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 7 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - A - - - ML 57 56 3 59 3 1 7 60 80 -8.093 -0.019 -6.747 1.769 -2.632 -2.238 -2.201 D 58 56 3 59 3 0 2 59 79 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 6 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - G - - - ML 60 59 3 62 3 1 7 59 79 -8.093 -0.019 -6.747 -1.853 -3.114 1.779 -2.501 D 61 59 3 62 3 0 2 58 78 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 5 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - G - - - ML 63 62 3 65 3 1 6 58 78 -8.093 -0.019 -6.747 -1.853 -3.114 1.779 -2.501 D 64 62 3 65 3 0 1 57 76 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 5 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - U - - - ML 66 65 3 68 3 1 6 57 76 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 67 65 3 68 3 0 1 56 75 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - A - - - ML 69 68 3 71 3 1 5 56 75 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 70 68 3 71 3 0 0 55 74 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 4 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 55 - a - - MR 72 71 3 74 3 1 4 55 74 -8.475 -0.017 -6.793 0.961 -0.122 -1.196 -0.519 D 73 71 3 74 3 0 0 54 73 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 3 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 54 - G - - MR 75 74 3 77 3 1 4 54 73 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 76 74 3 77 3 0 0 53 72 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 53 - A - - MR 78 77 3 80 3 1 4 53 72 -8.475 -0.017 -6.793 1.034 -1.513 0.117 -0.950 D 79 77 3 80 3 0 0 52 71 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 2 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 52 - A - - MR 81 80 3 83 3 1 3 52 71 -8.475 -0.017 -6.793 1.769 -2.632 -2.238 -2.201 D 82 80 3 83 3 0 0 51 70 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 51 - C - - MR 84 83 3 86 3 1 3 51 70 -8.475 -0.017 -6.793 -2.056 1.699 -2.887 -1.407 D 85 83 3 86 3 0 0 50 69 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 50 - U - - MR 87 86 3 89 3 1 2 50 69 -8.475 -0.017 -6.793 -1.727 -1.681 -2.472 1.681 D 88 86 3 89 3 0 0 49 68 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 49 - U - - MR 90 89 3 92 3 1 2 49 68 -8.475 -0.017 -6.793 -1.727 -1.681 -2.472 1.681 D 91 89 3 92 3 0 0 48 67 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 48 - G - - MR 93 92 3 95 5 1 1 48 67 -7.206 -0.036 -7.021 -7.234 -8.125 -1.853 -3.114 1.779 -2.501 D 94 92 3 95 5 0 0 47 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 15 47 a g - - MP 96 95 3 100 6 2 2 47 66 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -2.953 -2.989 2.011 0.303 -2.402 -3.676 1.572 -2.971 -3.038 0.466 -3.501 -1.275 0.968 -3.201 1.489 -2.079 ML 97 95 3 100 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 46 u a - - MP 102 101 6 106 6 2 2 45 64 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.159 -2.891 -3.211 1.684 -2.691 -4.029 1.583 -3.165 -3.208 1.067 -3.706 -0.777 2.371 -3.415 -0.409 -2.150 ML 103 101 6 106 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 45 G C - - MP 108 107 6 112 6 2 2 43 62 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 109 107 6 112 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 18 44 u a - - MP 114 113 6 118 6 2 2 41 60 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.591 -3.576 -3.514 0.072 -2.554 -4.119 1.741 -3.239 -3.532 0.273 -3.945 -1.640 2.672 -3.762 1.435 -2.440 ML 115 113 6 118 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 19 43 G C - - MP 120 119 6 124 6 2 2 39 58 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 121 119 6 124 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 20 42 g c - - MP 126 125 6 130 6 2 2 37 56 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.188 0.804 -3.339 1.085 -3.836 -3.959 0.328 -3.635 -3.246 2.595 -3.613 1.337 0.062 -3.381 -1.513 -2.276 ML 127 125 6 130 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 41 u a - - MP 132 131 6 136 6 2 2 35 54 -9.162 -9.101 -0.020 -7.877 -8.157 -8.552 -3.787 -3.726 -3.657 0.029 -2.581 -4.226 2.469 -3.297 -3.667 0.262 -4.054 -1.699 2.625 -3.925 -0.253 -2.533 ML 133 131 6 136 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 40 G C - - MP 138 137 6 142 4 2 2 33 52 -7.086 -7.293 -0.048 -5.707 -4.997 -3.216 -5.124 0.028 -5.591 -4.792 -0.892 -5.381 -4.490 3.694 -4.810 -0.926 -1.270 -4.634 -2.943 -3.996 ML 139 137 6 142 4 1 1 34 53 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 33 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 32 52 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 35 54 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 23 - a - - - ML 144 143 6 146 3 1 1 31 50 -8.093 -0.019 -6.747 0.347 -0.884 -0.038 0.277 D 145 143 6 146 3 0 0 29 49 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 24 - U - - - ML 147 146 3 149 3 1 1 29 48 -8.093 -0.019 -6.747 -1.727 -1.681 -2.472 1.681 D 148 146 3 149 3 0 0 28 47 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 25 - u - - - ML 150 149 3 152 3 1 1 28 47 -8.093 -0.019 -6.747 -0.485 -0.955 -0.099 0.876 D 151 149 3 152 3 0 0 27 46 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 26 - G - - - ML 153 152 3 155 3 1 1 27 46 -8.475 -0.017 -6.793 -1.853 -3.114 1.779 -2.501 D 154 152 3 155 3 0 0 26 45 -5.620 -0.734 -1.403 IL 155 155 3 155 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 39 - g - - MR 156 155 3 158 3 1 1 26 45 -8.475 -0.017 -6.793 -0.470 -0.246 0.820 -0.578 D 157 155 3 158 3 0 0 25 43 -6.390 -1.568 -0.620 IR 158 158 3 158 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 38 - a - - MR 159 158 3 161 3 1 1 25 44 -8.475 -0.017 -6.793 0.351 -0.150 0.009 -0.291 D 160 158 3 161 3 0 0 24 42 -6.390 -1.568 -0.620 IR 161 161 3 161 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 37 - C - - MR 162 161 3 164 3 1 1 24 43 -8.475 -0.017 -6.793 -2.056 1.699 -2.887 -1.407 D 163 161 3 164 3 0 0 23 42 -6.390 -1.568 -0.620 IR 164 164 3 164 3 1 1 25 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 36 - U - - MR 165 164 3 167 5 1 1 23 42 -7.206 -0.036 -7.021 -7.234 -8.125 -1.727 -1.681 -2.472 1.681 D 166 164 3 167 5 0 0 22 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 167 167 3 167 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 27 35 u a - - MP 168 167 3 172 4 2 2 22 41 -7.086 -7.293 -0.048 -5.707 -3.791 -3.730 -3.659 0.023 -2.582 -4.226 2.431 -3.298 -3.670 0.257 -4.056 -1.704 2.661 -3.928 -0.255 -2.537 ML 169 167 3 172 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 3 172 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 3 172 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 25 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 28 - g - - - ML 174 173 6 176 3 1 1 19 38 -8.093 -0.319 -2.360 -0.527 -1.215 0.842 0.114 D 175 173 6 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 29 - u - - - ML 177 176 3 179 3 1 1 18 36 -2.080 -0.411 -6.451 0.494 -0.765 -0.972 0.578 D 178 176 3 179 3 0 0 16 35 -7.698 -0.396 -2.089 IL 179 179 3 179 3 1 1 18 36 -2.007 -0.488 -4.707 0.000 0.000 0.000 0.000 [ MATL 46 ] 31 - u - - - ML 180 179 3 182 3 1 1 16 35 -8.093 -0.019 -6.747 -0.490 -0.955 -0.120 0.889 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - C - - - ML 183 182 3 185 3 1 1 15 33 -8.093 -0.019 -6.747 -2.056 1.699 -2.887 -1.407 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - c - - - ML 186 185 3 188 3 1 1 13 31 -8.093 -0.019 -6.747 -0.891 0.873 -1.705 0.404 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - c - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.891 0.873 -1.705 0.404 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB9Cs3H2 ACC RF01556 DESC Trypanosomatid snoRNA TB9Cs3H2 LENG 63 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 01:06:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01556/CM NSEQ 3 EFFN 2.446289 CKSUM 3589756571 STATS LOCAL MSV -8.3550 0.72304 STATS LOCAL VITERBI -9.0049 0.72304 STATS LOCAL FORWARD -3.3866 0.72304 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.48736 1.39714 1.21623 1.46800 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.14674 3.28952 3.00869 2.99858 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.61669 3.28998 0.16242 3.22847 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.02681 1.94518 2.78290 0.29208 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.61797 3.29152 0.16214 3.23061 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.24749 0.22818 3.02827 2.14771 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.24649 0.22829 3.02778 2.14753 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 1.76878 0.89640 1.45394 1.67252 7 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.65714 2.61309 3.17642 0.20480 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.90728 0.18952 3.48358 2.43815 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.14674 3.28952 3.00869 2.99858 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.75183 3.63668 0.13975 3.21205 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.75183 3.63668 0.13975 3.21205 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.65714 2.61309 3.17642 0.20480 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.14674 3.28952 3.00869 2.99858 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 1.02579 1.58811 2.15159 1.13670 15 a - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 1.48361 1.59228 1.75003 0.92646 16 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.61764 3.29113 0.16222 3.23006 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.52104 1.49690 2.29248 0.51955 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.61701 3.29037 0.16235 3.22901 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 1.35279 2.42365 0.59761 2.27539 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.55870 1.00765 2.30813 0.78073 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.61577 3.28887 0.16262 3.22693 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 1.14417 2.01387 1.40739 1.19317 23 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.65714 2.61309 3.17642 0.20480 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 1.74570 2.07188 1.45040 0.76561 25 u - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.75183 3.63668 0.13975 3.21205 26 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.56299 1.03343 2.31228 0.75906 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 1.77852 2.25755 0.78315 1.31103 28 g - - _ 1.38629 1.38629 1.38629 1.38629 0.26504 3.95124 1.54367 1.46634 0.26236 1.09861 0.40547 29 1.03958 1.93027 2.07599 0.97855 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.34764 1.31016 3.73512 0.16844 1.86422 0.16557 1.88000 30 1.74924 2.07199 1.46559 0.75669 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.90728 0.18952 3.48358 2.43815 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.04094 0.76270 2.61039 1.10811 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.04094 0.76270 2.61039 1.10811 34 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.85966 2.48145 0.92643 2.33194 35 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.65714 2.61309 3.17642 0.20480 36 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.90728 0.18952 3.48358 2.43815 37 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 1.14302 1.48453 1.37274 1.60383 38 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 1.74173 1.55511 0.79493 1.82014 39 g - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 3.42537 0.19275 3.12441 2.31453 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.88438 2.47436 0.90412 2.32364 41 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.50597 0.69220 2.23039 1.16976 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.43050 0.19231 3.12670 2.31551 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.85010 2.45875 0.95134 2.29402 44 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.43670 0.19178 3.12946 2.31668 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 1.03743 1.93479 1.42409 1.34533 46 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 1.93856 2.32315 0.44542 2.14072 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 2.75183 3.63668 0.13975 3.21205 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 2.65714 2.61309 3.17642 0.20480 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.65714 2.61309 3.17642 0.20480 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 2.90728 0.18952 3.48358 2.43815 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 0.14674 3.28952 3.00869 2.99858 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 0.65740 2.47279 1.29795 2.08453 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.75183 3.63668 0.13975 3.21205 54 G - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 0.70695 1.46518 2.24407 1.77318 55 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 2.42575 3.19574 0.19699 3.00668 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.42657 3.19688 0.19677 3.00804 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 3.43727 0.19173 3.12971 2.31679 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 0.33073 2.97124 1.78240 2.77861 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 3.44871 0.19077 3.13477 2.31894 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 1.15119 2.56207 0.71141 2.15725 61 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 61 0.14674 3.28952 3.00869 2.99858 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 62 2.75183 3.63668 0.13975 3.21205 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 63 0.14674 3.28952 3.00869 2.99858 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //