INFERNAL1/a [1.1.4 | Dec 2020] NAME TB9Cs3H1 ACC RF01555 DESC Trypanosomatid snoRNA TB9Cs3H1 STATES 208 NODES 54 CLEN 68 W 92 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:27:36 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 2.721680 CKSUM 1914403156 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 53.10 NC 33.60 EFP7GF -10.4490 0.71900 ECMLC 0.61902 -5.97154 3.24427 1600000 360360 0.003330 ECMGC 0.41846 -16.56118 -3.54889 1600000 92653 0.004317 ECMLI 0.60338 -4.39214 4.52791 1600000 260986 0.004598 ECMGI 0.46552 -11.21751 -0.26074 1600000 65650 0.006093 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 92 120 -7.241 -7.448 -0.043 -5.862 IL 1 1 2 1 4 1 27 94 123 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 94 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 26 92 120 -8.612 -0.016 -6.930 1.067 -0.195 -1.321 -0.665 D 4 2 3 5 3 0 21 90 119 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 25 92 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 73 - G - - MR 6 5 3 8 3 1 26 91 119 -8.612 -0.016 -6.930 -2.153 -3.453 1.825 -2.839 D 7 5 3 8 3 0 19 89 117 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 24 91 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 72 - A - - MR 9 8 3 11 3 1 25 90 118 -8.612 -0.016 -6.930 1.815 -2.927 -2.504 -2.526 D 10 8 3 11 3 0 18 88 116 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 23 90 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 71 - a - - MR 12 11 3 14 5 1 25 89 117 -7.335 -0.033 -7.150 -7.363 -8.254 0.662 -0.657 0.113 -0.511 D 13 11 3 14 5 0 17 87 116 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 21 89 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 2 70 G C - - MP 15 14 3 19 6 2 25 88 116 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -5.278 -3.354 -5.447 -0.169 -5.982 -4.896 -1.213 -5.713 -4.660 3.744 -4.962 -1.079 -1.585 -4.814 -3.282 -4.316 ML 16 14 3 19 6 1 19 86 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 19 86 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 14 83 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 21 87 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 21 87 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 69 C G - - MP 21 20 6 25 6 2 24 86 114 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -4.211 -4.163 -3.980 -0.336 -2.738 -4.459 3.217 -3.507 -3.994 -0.130 -4.329 -2.112 1.697 -4.297 -0.397 -2.827 ML 22 20 6 25 6 1 18 84 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 18 84 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 13 81 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 20 85 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 20 85 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 68 A U - - MP 27 26 6 31 6 2 23 84 112 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.622 -3.158 -3.636 3.336 -3.745 -4.758 0.195 -0.261 -3.704 0.529 -4.246 -0.931 -0.159 -4.030 -1.618 -2.687 ML 28 26 6 31 6 1 18 82 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 17 82 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 13 79 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 19 83 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 20 83 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 67 c g - - MP 33 32 6 37 6 2 21 82 110 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.403 -3.019 -3.447 0.568 -2.833 -4.204 2.706 -3.323 -3.403 0.932 -3.865 1.211 1.014 -3.651 -0.505 -2.331 ML 34 32 6 37 6 1 17 80 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 17 80 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 13 77 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 19 81 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 19 81 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 66 g c - - MP 39 38 6 43 6 2 19 80 108 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.696 -2.622 -3.729 2.563 -4.318 -4.720 0.117 -4.006 -3.709 2.617 -4.187 -0.186 -0.172 -3.941 -1.833 -2.600 ML 40 38 6 43 6 1 16 78 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 16 78 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 12 75 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 17 79 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 17 79 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 65 A U - - MP 45 44 6 49 6 2 17 78 106 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -4.309 -3.218 -4.277 3.585 -4.891 -6.015 -0.555 -4.283 -4.161 0.518 -4.733 -0.620 -0.969 -5.106 -2.493 -3.090 ML 46 44 6 49 6 1 15 76 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 14 76 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 12 74 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 16 77 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 16 77 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 64 U G - - MP 51 50 6 55 4 2 15 76 104 -7.241 -7.448 -0.043 -5.862 -4.652 -4.594 -4.226 -0.879 -2.829 -4.563 1.468 -3.648 -4.273 -0.779 -4.508 -2.580 0.548 -4.682 3.297 -3.118 ML 52 50 6 55 4 1 14 75 104 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 13 75 103 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 11 73 102 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 15 76 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 15 76 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 9 - U - - - ML 57 56 6 59 3 1 14 74 102 -8.238 -0.017 -6.892 -0.373 -1.141 -1.613 1.291 D 58 56 6 59 3 0 11 72 100 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 75 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - a - - - ML 60 59 3 62 3 1 13 73 101 -8.238 -0.518 -1.746 0.625 -0.989 -1.194 0.601 D 61 59 3 62 3 0 10 71 100 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 74 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 11 - A - - - ML 63 62 3 65 3 1 13 72 100 -7.745 -0.024 -6.399 1.605 -1.934 -1.610 -1.437 D 64 62 3 65 3 0 10 71 99 -8.258 -0.256 -2.649 IL 65 65 3 65 3 1 12 73 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 12 - A - - - ML 66 65 3 68 3 1 12 71 99 -8.238 -0.017 -6.892 1.815 -2.927 -2.504 -2.526 D 67 65 3 68 3 0 7 69 97 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 11 72 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 13 - C - - - ML 69 68 3 71 3 1 12 70 98 -8.238 -0.017 -6.892 -2.413 1.765 -3.243 -1.695 D 70 68 3 71 3 0 6 68 96 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 71 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - A - - - ML 72 71 3 74 3 1 11 69 97 -8.238 -0.017 -6.892 1.815 -2.927 -2.504 -2.526 D 73 71 3 74 3 0 6 67 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 70 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - C - - - ML 75 74 3 77 3 1 10 68 96 -8.612 -0.016 -6.930 -2.413 1.765 -3.243 -1.695 D 76 74 3 77 3 0 5 66 95 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 9 68 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 63 - U - - MR 78 77 3 80 3 1 9 67 95 -8.612 -0.016 -6.930 -2.005 -1.913 -2.760 1.739 D 79 77 3 80 3 0 3 65 93 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 8 67 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 62 - G - - MR 81 80 3 83 3 1 9 66 94 -8.612 -0.016 -6.930 -2.153 -3.453 1.825 -2.839 D 82 80 3 83 3 0 3 64 92 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 7 66 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 61 - A - - MR 84 83 3 86 3 1 8 65 93 -8.612 -0.016 -6.930 1.815 -2.927 -2.504 -2.526 D 85 83 3 86 3 0 2 63 91 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 7 65 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 60 - C - - MR 87 86 3 89 3 1 8 64 92 -8.612 -0.016 -6.930 -2.413 1.765 -3.243 -1.695 D 88 86 3 89 3 0 1 62 90 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 6 64 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 59 - C - - MR 90 89 3 92 3 1 7 63 91 -8.612 -0.016 -6.930 -2.413 1.765 -3.243 -1.695 D 91 89 3 92 3 0 1 61 90 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 5 63 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 58 - G - - MR 93 92 3 95 5 1 7 62 90 -7.335 -0.033 -7.150 -7.363 -8.254 -2.153 -3.453 1.825 -2.839 D 94 92 3 95 5 0 0 60 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 4 62 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 57 G C - - MP 96 95 3 100 6 2 8 61 89 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -5.278 -3.354 -5.447 -0.169 -5.982 -4.896 -1.213 -5.713 -4.660 3.744 -4.962 -1.079 -1.585 -4.814 -3.282 -4.316 ML 97 95 3 100 6 1 2 59 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 2 59 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 56 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 3 60 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 3 60 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 56 G C - - MP 102 101 6 106 6 2 7 59 87 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -5.278 -3.354 -5.447 -0.169 -5.982 -4.896 -1.213 -5.713 -4.660 3.744 -4.962 -1.079 -1.585 -4.814 -3.282 -4.316 ML 103 101 6 106 6 1 2 57 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 2 57 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 54 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 3 58 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 3 58 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 55 A U - - MP 108 107 6 112 6 2 5 57 85 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -4.309 -3.218 -4.277 3.585 -4.891 -6.015 -0.555 -4.283 -4.161 0.518 -4.733 -0.620 -0.969 -5.106 -2.493 -3.090 ML 109 107 6 112 6 1 2 55 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 2 55 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 53 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 2 56 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 2 56 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 54 u a - - MP 114 113 6 118 4 2 4 55 83 -7.241 -3.135 -0.214 -5.862 -3.967 -3.915 -3.816 -0.128 -2.691 -4.367 2.491 -3.421 -3.822 0.082 -4.200 -1.875 2.703 -4.096 -0.355 -2.678 ML 115 113 6 118 4 1 1 54 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 4 1 1 53 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 117 113 6 118 4 0 0 52 81 -4.568 -4.250 -2.265 -0.520 IL 118 118 5 118 4 1 2 55 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 119 119 6 119 3 1 2 54 83 -1.804 -0.579 -4.504 0.000 0.000 0.000 0.000 [ MATL 29 ] 20 - c - - - ML 120 119 6 122 3 1 3 53 81 -8.238 -0.017 -6.892 0.002 0.289 -0.481 0.085 D 121 119 6 122 3 0 0 51 79 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 54 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 21 - c - - - ML 123 122 3 125 3 1 2 52 80 -8.612 -0.016 -6.930 -0.266 0.811 -1.472 0.075 D 124 122 3 125 3 0 0 50 79 -5.620 -0.734 -1.403 IL 125 125 3 125 3 1 1 52 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 52 - u - - MR 126 125 3 128 3 1 2 51 79 -8.612 -0.016 -6.930 -0.031 0.053 -0.513 0.359 D 127 125 3 128 3 0 0 49 77 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 51 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 51 - u - - MR 129 128 3 131 3 1 1 50 78 -8.612 -0.016 -6.930 0.047 -0.367 -0.103 0.334 D 130 128 3 131 3 0 0 48 76 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 50 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 50 - G - - MR 132 131 3 134 5 1 1 49 77 -7.335 -0.033 -7.150 -7.363 -8.254 -2.153 -3.453 1.825 -2.839 D 133 131 3 134 5 0 0 47 76 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 49 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 22 49 a u - - MP 135 134 3 139 6 2 2 48 76 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.537 -2.521 -3.598 2.357 -4.246 -4.671 0.080 -3.886 -3.574 2.225 -4.068 1.623 -0.167 -3.850 -1.822 -2.480 ML 136 134 3 139 6 1 1 46 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 46 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 44 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 47 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 47 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 23 48 C G - - MP 141 140 6 145 4 2 2 46 74 -7.241 -7.448 -0.043 -5.862 -5.156 -5.113 -4.740 -1.301 -3.338 -5.071 3.702 -4.209 -4.816 -1.132 -5.005 -3.075 0.106 -5.183 -1.066 -3.637 ML 142 140 6 145 4 1 1 45 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 45 73 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 43 72 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 46 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 46 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 24 - c - - - ML 147 146 6 149 3 1 1 43 72 -8.238 -0.332 -2.306 -0.608 0.780 -0.712 0.023 D 148 146 6 149 3 0 0 42 70 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 45 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 25 - u - - - ML 150 149 3 152 3 1 1 43 71 -7.927 -0.021 -6.581 -0.284 0.214 -0.318 0.283 D 151 149 3 152 3 0 0 41 70 -7.837 -0.354 -2.229 IL 152 152 3 152 3 1 1 44 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 26 - u - - - ML 153 152 3 155 3 1 1 42 70 -8.612 -0.016 -6.930 -0.184 -0.304 -1.321 0.933 D 154 152 3 155 3 0 0 40 69 -5.620 -0.734 -1.403 IL 155 155 3 155 3 1 1 42 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 47 - g - - MR 156 155 3 158 5 1 1 41 69 -7.335 -0.033 -7.150 -7.363 -8.254 -0.086 -0.721 0.871 -0.683 D 157 155 3 158 5 0 0 39 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 158 158 3 158 5 1 1 41 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 27 46 g c - - MP 159 158 3 163 6 2 2 40 68 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.311 -2.394 -3.308 1.145 -3.814 -4.099 0.496 -3.728 -3.481 2.874 -3.899 0.733 0.230 -3.351 -1.397 -0.024 ML 160 158 3 163 6 1 1 38 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 6 1 1 38 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 35 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 39 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 39 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 28 45 g c - - MP 165 164 6 169 6 2 2 38 66 -9.226 -9.166 -0.019 -7.942 -8.222 -8.617 -3.451 -0.247 -3.451 1.794 -4.026 -4.179 0.290 -3.891 -3.590 2.895 -4.000 -0.174 0.036 -3.465 -1.595 -2.441 ML 166 164 6 169 6 1 1 36 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 35 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 33 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 37 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 37 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 29 44 c g - - MP 171 170 6 175 4 2 2 36 64 -2.276 -7.448 -0.376 -5.862 -3.238 -3.275 -3.256 0.220 -2.499 -3.938 2.828 0.176 -3.273 0.338 -3.734 -1.464 1.116 -3.465 0.827 -2.251 ML 172 170 6 175 4 1 1 33 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 32 60 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 31 60 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 36 65 -0.935 -4.253 -1.268 -6.739 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - a - - - ML 177 176 6 179 3 1 1 24 42 -8.238 -0.017 -6.892 0.389 -0.200 0.063 -0.367 D 178 176 6 179 3 0 0 23 42 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - U - - - ML 180 179 3 182 3 1 1 23 41 -8.238 -0.017 -6.892 -0.373 -1.141 -1.613 1.291 D 181 179 3 182 3 0 0 22 41 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - A - - - ML 183 182 3 185 3 1 1 21 40 -8.238 -0.017 -6.892 1.342 -1.449 -1.477 -0.435 D 184 182 3 185 3 0 0 20 39 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - c - - - ML 186 185 3 188 3 1 1 20 39 -3.140 -0.187 -6.892 -0.209 0.806 -1.458 0.032 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 21 39 -1.830 -0.566 -4.531 0.000 0.000 0.000 0.000 [ MATL 47 ] 38 - u - - - ML 189 188 3 191 3 1 1 19 37 -8.238 -0.017 -6.892 -0.942 0.609 -1.751 0.729 D 190 188 3 191 3 0 0 18 37 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 39 - U - - - ML 192 191 3 194 3 1 1 17 36 -8.238 -0.017 -6.892 -2.005 -1.913 -2.760 1.739 D 193 191 3 194 3 0 0 17 36 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 40 - u - - - ML 195 194 3 197 3 1 1 16 35 -8.238 -0.017 -6.892 -0.938 0.558 -1.744 0.772 D 196 194 3 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 41 - a - - - ML 198 197 3 200 3 1 1 15 33 -8.238 -0.017 -6.892 0.722 -1.662 0.644 -1.085 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 42 - G - - - ML 201 200 3 203 3 1 1 13 31 -8.238 -0.017 -6.892 -0.449 -2.241 1.455 -1.671 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 43 - U - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 -1.174 -0.457 -1.929 1.359 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME TB9Cs3H1 ACC RF01555 DESC Trypanosomatid snoRNA TB9Cs3H1 LENG 68 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:27:36 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 6 EFFN 3.934570 CKSUM 1914403156 STATS LOCAL MSV -8.3464 0.71900 STATS LOCAL VITERBI -9.0570 0.71900 STATS LOCAL FORWARD -3.7661 0.71900 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.45345 1.36094 1.32504 1.41048 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 0.00000 * 1 0.56978 1.49469 2.50773 2.05121 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 2 3.01108 3.86837 0.09676 3.81244 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 3 3.06556 0.43703 2.84531 1.38908 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 4 0.30977 2.14957 2.34820 2.91304 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 5 2.43792 0.72310 1.29151 1.88022 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 6 0.81939 2.88505 0.82529 2.72816 6 a - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 7 0.15839 3.59010 2.42957 3.47978 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 8 3.46730 1.91251 3.32875 0.24175 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 9 1.73251 2.39008 2.74310 0.40471 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 10 0.91062 2.21238 2.35241 0.93357 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.44651 4.22418 1.06274 1.46634 0.26236 1.09861 0.40547 11 0.18538 3.07506 2.81543 2.76231 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.04474 3.82240 3.82240 1.46634 0.26236 0.08133 2.54962 12 0.07885 3.87538 3.54309 3.64369 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 13 3.60165 0.09666 4.14934 3.01427 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 14 0.07885 3.87538 3.54309 3.64369 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 15 3.60165 0.09666 4.14934 3.01427 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 16 3.00918 3.86558 0.09702 3.80866 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 17 3.00858 3.86468 0.09710 3.80745 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 18 0.15809 3.59298 2.43029 3.48350 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 19 2.91626 0.99211 2.69073 0.67877 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 20 1.41854 1.12578 1.72463 1.36534 20 c - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 21 1.64453 0.73139 2.59928 1.38098 21 c - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 22 0.97797 2.92088 0.68316 2.73299 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 23 3.88004 0.12195 3.72681 2.65805 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 24 1.97258 0.74845 1.91142 1.42739 24 c - - - 1.38629 1.38629 1.38629 1.38629 0.28848 4.22418 1.44409 1.46634 0.26236 1.09861 0.40547 25 1.66856 1.17814 1.58993 1.20500 25 c - - - 1.38629 1.38629 1.38629 1.38629 0.03832 3.97402 3.97402 1.46634 0.26236 0.11695 2.20389 26 1.55838 1.60886 2.43880 0.68887 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 27 1.92133 2.54455 0.48081 1.85281 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 28 1.18811 2.64836 0.61367 2.48803 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 29 2.69799 0.50080 2.51632 1.40300 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.27974 1.47237 4.22418 0.94919 0.48948 1.09861 0.40547 30 1.11063 1.49488 1.29925 1.75079 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 31 1.73251 2.39008 2.74310 0.40471 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 32 0.38225 2.59192 2.63100 1.76731 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 33 1.59606 0.73476 2.58752 1.41684 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.16849 1.96309 4.22418 0.19684 1.72219 1.09861 0.40547 34 2.26789 0.88492 2.85389 0.85307 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 35 3.22141 3.08624 3.75696 0.11533 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 36 2.26479 0.92375 2.84715 0.81846 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 37 0.84068 2.80186 0.87011 2.41933 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 38 1.79943 3.24209 0.30270 2.86990 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 39 2.48063 1.75121 3.01061 0.36603 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 40 2.06202 2.68557 0.45649 1.76539 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 41 2.74185 0.58789 2.45669 1.22304 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 42 2.64908 0.66307 2.35417 1.14243 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 43 1.52626 1.91931 0.67892 2.04966 47 G - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 44 2.94532 3.89879 0.10383 3.65860 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 45 2.97169 1.24709 2.72388 0.51781 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 46 3.32344 4.27242 0.07433 3.83234 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 47 1.37624 1.64695 1.42832 1.15478 51 u - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 48 1.43797 1.31259 1.74589 1.14263 52 u - - - 1.38629 1.38629 1.38629 1.38629 0.15712 2.03438 4.22418 0.21056 1.66141 1.09861 0.40547 49 0.75126 2.85911 0.91092 2.67718 54 a - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 50 3.70518 2.79738 3.40100 0.12659 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 51 3.98844 0.11654 3.72387 2.69806 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 52 4.00368 0.11582 3.73133 2.70080 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 53 3.32344 4.27242 0.07433 3.83234 58 G - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 54 3.60165 0.09666 4.14934 3.01427 59 C - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 55 3.60165 0.09666 4.14934 3.01427 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 56 0.07885 3.87538 3.54309 3.64369 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 57 3.32344 4.27242 0.07433 3.83234 62 G - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 58 3.22141 3.08624 3.75696 0.11533 63 U - - - 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 59 2.50680 3.51365 0.16486 3.20223 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 60 3.69338 2.79529 3.39556 0.12727 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 61 2.96097 0.92353 2.69037 0.72720 66 u - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 62 2.12439 2.32761 0.66405 1.31601 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 63 3.14371 2.64210 2.80506 0.19217 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 64 1.53743 3.01255 0.39084 2.82326 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 65 4.00578 0.11572 3.73236 2.70117 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 66 0.89421 1.86469 1.26468 1.87213 71 a - - : 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 67 0.07885 3.87538 3.54309 3.64369 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.02971 4.22418 4.22418 1.46634 0.26236 1.09861 0.40547 68 3.32344 4.27242 0.07433 3.83234 73 G - - : 1.38629 1.38629 1.38629 1.38629 0.01497 4.20943 * 1.46634 0.26236 0.00000 * //